Citrus Sinensis ID: 040003
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 489 | 2.2.26 [Sep-21-2011] | |||||||
| Q38870 | 646 | Calcium-dependent protein | yes | no | 0.985 | 0.746 | 0.445 | 1e-132 | |
| Q9ZV15 | 583 | Calcium-dependent protein | no | no | 1.0 | 0.838 | 0.476 | 1e-132 | |
| Q06850 | 610 | Calcium-dependent protein | no | no | 0.983 | 0.788 | 0.455 | 1e-131 | |
| A5A7I8 | 535 | Calcium-dependent protein | N/A | no | 0.797 | 0.728 | 0.457 | 1e-108 | |
| Q38872 | 544 | Calcium-dependent protein | no | no | 0.760 | 0.683 | 0.465 | 1e-107 | |
| Q38871 | 556 | Calcium-dependent protein | no | no | 0.914 | 0.803 | 0.418 | 1e-107 | |
| A5A7I7 | 557 | Calcium-dependent protein | N/A | no | 0.799 | 0.701 | 0.444 | 1e-106 | |
| Q9SZM3 | 484 | Calcium-dependent protein | no | no | 0.777 | 0.785 | 0.457 | 1e-106 | |
| P28583 | 508 | Calcium-dependent protein | no | no | 0.770 | 0.742 | 0.434 | 4e-97 | |
| P53684 | 542 | Calcium-dependent protein | no | no | 0.752 | 0.678 | 0.442 | 2e-94 |
| >sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 280/628 (44%), Positives = 356/628 (56%), Gaps = 146/628 (23%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTR-----------------------PPEDRL---P 34
MGN CVGPN++ NGFLQ+VTAA+WR R P D++ P
Sbjct: 1 MGNACVGPNISGNGFLQTVTAAMWRPRIGAEQASSSSHGNGQVSKEAASEPATDQVQNKP 60
Query: 35 PPPKNEPSDNT--ERSLK---------AKDQSKASDTAPAPAPTPTPIQSTPPPPVKINN 83
P P PS T E LK K++ A +T P + Q PP K
Sbjct: 61 PEPITMPSSKTNPETKLKPDLEIQPEEKKEKVLAEETKQKVVPEESK-QEVPPEESKREV 119
Query: 84 NRQPPAPVPQQQQE--------------------QSKKPAHVKRISSAGLQVGSVLGRKT 123
QP + P+ + E + +KP H++R+SSAGL+ SVL RKT
Sbjct: 120 VVQPESAKPETKSESKPETTKPETTSETKPETKAEPQKPKHMRRVSSAGLRTESVLQRKT 179
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
N KE YSLGRKLGQGQFGTTFLC+EK T E+ACKSI+KRKL T+EDVEDVRREI+IMH
Sbjct: 180 ENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMH 239
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HLAGHPNVI I GAYED VAVH+VMELC+GGELFDRIIQRGHYTERKAA+L R IVGV+E
Sbjct: 240 HLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTIVGVLE 299
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR-------------- 289
ACHSLGVMHRDLKPENFLF++++E++ LKTIDFGLSMFF+P F
Sbjct: 300 ACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPEVL 359
Query: 290 ---------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWPD------- 324
VW + ++ L F+ + Q + + L +L+ WP
Sbjct: 360 RKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKD 419
Query: 325 ---KVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK-GLQR 374
K+ V R+ A + + +A K + + + + + + KK L+
Sbjct: 420 LVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRV 479
Query: 375 VGANLMDSEIDGLMQAG---DIDNSG---------------------------------- 397
+ +L + EI GL Q D DNSG
Sbjct: 480 IAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDN 539
Query: 398 --TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLE 455
T+DY EFIAA LHLNKI+REDH++AAFSYFDKD SG+ITPDELQ AC++FG++D ++E
Sbjct: 540 SGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACEEFGVEDARIE 599
Query: 456 DIIREVDQDNDGRIDYSEFVAMMQDSGL 483
+++R+VDQD DGRIDY+EFVAMMQ +
Sbjct: 600 EMMRDVDQDKDGRIDYNEFVAMMQKGSI 627
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9ZV15|CDPKK_ARATH Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 277/581 (47%), Positives = 348/581 (59%), Gaps = 92/581 (15%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGNTCVGPNLN NGFLQSV+AAVWR + P+D + ++S+ D + +
Sbjct: 1 MGNTCVGPNLNPNGFLQSVSAAVWRNQKPDDSIKSSKDESSRKKNDKSVNGDDSNGHVSS 60
Query: 61 APAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKP----AHVKRISSAGLQVG 116
PAP+ P STPPPPVK+ N PP P+ + +++ + KP AH+KR++SAGLQ+
Sbjct: 61 TVDPAPSTLPTPSTPPPPVKMANEEPPPKPITENKEDPNSKPQKKEAHMKRMASAGLQID 120
Query: 117 SVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR 176
SVLGRKT NLK++YS+GRKLGQGQFGTTFLCV+K T KEFACK+IAKRKLTT EDVEDVR
Sbjct: 121 SVLGRKTENLKDIYSVGRKLGQGQFGTTFLCVDKKTGKEFACKTIAKRKLTTPEDVEDVR 180
Query: 177 REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
REI+IMHHL+GHPNVIQIVGAYEDAVAVHVVME+CAGGELFDRIIQRGHYTE+KAA+L R
Sbjct: 181 REIQIMHHLSGHPNVIQIVGAYEDAVAVHVVMEICAGGELFDRIIQRGHYTEKKAAELAR 240
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR------- 289
IIVGV+EACHSLGVMHRDLKPENFLF++ EEA LKTIDFGLS+FF+PG TF
Sbjct: 241 IIVGVIEACHSLGVMHRDLKPENFLFVSGDEEAALKTIDFGLSVFFKPGETFTDVVGSPY 300
Query: 290 ----------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWP- 323
VW + ++ L F+ + Q + + L +L+ WP
Sbjct: 301 YVAPEVLRKHYSHECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGDLDFISEPWPS 360
Query: 324 ------DKVAVPPIGD--------RVIAESLSEEEIAGL-KEMFKMIDTDNSGYITLEEL 368
D V I D V+ + + L K + + + + + +L
Sbjct: 361 VSESAKDLVRRMLIRDPKKRMTTHEVLCHPWARVDGVALDKPLDSAVLSRLQQFSAMNKL 420
Query: 369 KK-GLQRVGANLMDSEIDGL---MQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424
KK ++ + +L + EI GL + D DNSG + E + + ++ +
Sbjct: 421 KKIAIKVIAESLSEEEIAGLKEMFKMIDTDNSGHITLEELKKGLDRVGADLKDSEILGLM 480
Query: 425 SYFDKDGSG------------------------------------YITPDELQTACQQFG 448
D D SG YIT DELQ AC+QFG
Sbjct: 481 QAADIDNSGTIDYGEFIAAMVHLNKIEKEDHLFTAFSYFDQDGSGYITRDELQQACKQFG 540
Query: 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
L D L+DI+REVD+DNDGRIDYSEFV MMQD+G GK K
Sbjct: 541 LADVHLDDILREVDKDNDGRIDYSEFVDMMQDTGFGKMGLK 581
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06850|CDPK1_ARATH Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 270/593 (45%), Positives = 342/593 (57%), Gaps = 112/593 (18%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGNTCVGP+ NGFLQSV+AA+WR R +D + S+ L+++ + +
Sbjct: 1 MGNTCVGPS--RNGFLQSVSAAMWRPRDGDDSASMSNGDIASEAVSGELRSRLSDEVQNK 58
Query: 61 APAPAPTPTPIQSTPPPPVKINNNRQPPA---------PVPQQQQEQSKKP--------- 102
P P P +I +P P +Q+ + KP
Sbjct: 59 PPEQVTMPKPGTDVETKDREIRTESKPETLEEISLESKPETKQETKSETKPESKPDPPAK 118
Query: 103 ----AHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFAC 158
H+KR+SSAGL+ SVL RKT N KE YSLGRKLGQGQFGTTFLCVEK T KEFAC
Sbjct: 119 PKKPKHMKRVSSAGLRTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFAC 178
Query: 159 KSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFD 218
KSIAKRKL T+EDVEDVRREI+IMHHLAGHPNVI I GAYED VAVH+VME CAGGELFD
Sbjct: 179 KSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFD 238
Query: 219 RIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
RIIQRGHYTERKAA+LTR IVGVVEACHSLGVMHRDLKPENFLF+++ E++ LKTIDFGL
Sbjct: 239 RIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGL 298
Query: 279 SMFFRPGLTFR-----------------------VW---LRLHFL------FFQKQRQSV 306
SMFF+P F VW + ++ L F+ + Q +
Sbjct: 299 SMFFKPDDVFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGI 358
Query: 307 LQTRLVRNLNEPGSLWPD----------KVAVPPIGDRVIAES------LSEEEIAGLKE 350
+ L +L+ WP K+ V R+ A + + +A K
Sbjct: 359 FEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKP 418
Query: 351 MFKMIDTDNSGYITLEELKK-GLQRVGANLMDSEIDGLMQAG---DIDNSGTMDYGEF-- 404
+ + + + + + KK L+ + +L + EI GL + D D SG + + E
Sbjct: 419 LDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKA 478
Query: 405 ----------------------------------IAAMLHLNKIQREDHMYAAFSYFDKD 430
IAA LHLNKI+REDH++AAF+YFDKD
Sbjct: 479 GLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKD 538
Query: 431 GSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483
GSGYITPDELQ AC++FG++D ++E+++R+VDQDNDGRIDY+EFVAMMQ +
Sbjct: 539 GSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSI 591
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May play a role in signal transduction pathways that involve calcium as a second messenger. Phosphorylates the Ca(2+)-ATPase ACA2 resulting in the inhibition of its calcium activation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|A5A7I8|CDPK5_SOLTU Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 284/492 (57%), Gaps = 102/492 (20%)
Query: 90 PVPQQQQEQSKKPAH--------------VKRISSAGLQVGSVLGRKTGNLKEMYSLGRK 135
P PQ E + P H V ++ Q VLG KT N++++Y+LGRK
Sbjct: 18 PQPQDHSESNSNPKHNSDSPKPKKEQQPLVTMNRTSTNQSYYVLGHKTPNIRDLYTLGRK 77
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LGQGQFGTT+LC E ++ ++ACKSIAKRKL ++EDVEDVRREI+IMHHLAGH N++ I
Sbjct: 78 LGQGQFGTTYLCTELSSGIDYACKSIAKRKLISKEDVEDVRREIQIMHHLAGHKNIVSIK 137
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
GAYED + VH+VMELC GGELFDRIIQRGHYTERKAADLT+IIVGVVEACHSLGVMHRDL
Sbjct: 138 GAYEDPLYVHIVMELCGGGELFDRIIQRGHYTERKAADLTKIIVGVVEACHSLGVMHRDL 197
Query: 256 KPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR-----------------------VW- 291
KPENFL +N+ ++ LK IDFGLS+FF+PG F VW
Sbjct: 198 KPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWT 257
Query: 292 --LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWP----------DKVAVPPIGD 333
+ L+ L F+ + +Q + L +++ WP K+ +
Sbjct: 258 AGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLLSESAKDLIRKMLCMRPSE 317
Query: 334 RVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK-GLQRVGANLMDSEIDG 386
R+ A + E +A + + + + + + +LKK L+ + +L + EI G
Sbjct: 318 RLTAHEVLCHPWICENGVAPDRALDPAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIAG 377
Query: 387 L---MQAGDIDN------------------------------------SGTMDYGEFIAA 407
L +A D DN SGT+DYGEFIAA
Sbjct: 378 LKEMFKAMDTDNSGAITFDELKAGLRKYGSTLKDIEIRELMDAADVDNSGTIDYGEFIAA 437
Query: 408 MLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG 467
+HLNK+ RE+H+ AAF YFDKDGSGYIT DELQ AC + D EDIIREVDQDNDG
Sbjct: 438 TIHLNKLDREEHLMAAFQYFDKDGSGYITVDELQQACADHNITDVFFEDIIREVDQDNDG 497
Query: 468 RIDYSEFVAMMQ 479
RIDY EFVAMMQ
Sbjct: 498 RIDYGEFVAMMQ 509
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Regulates the production of reactive oxygen species (ROS) by NADPH oxidase. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38872|CDPK6_ARATH Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/462 (46%), Positives = 283/462 (61%), Gaps = 90/462 (19%)
Query: 118 VLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRR 177
VLG KT N++++Y+L RKLGQGQFGTT+LC + AT ++ACKSI+KRKL ++EDVEDVRR
Sbjct: 73 VLGHKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRR 132
Query: 178 EIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237
EI+IMHHLAGH N++ I GAYED + VH+VMELCAGGELFDRII RGHY+ERKAA+LT+I
Sbjct: 133 EIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKI 192
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR-------- 289
IVGVVEACHSLGVMHRDLKPENFL +N+ ++ LK IDFGLS+FF+PG F+
Sbjct: 193 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFKDVVGSPYY 252
Query: 290 ---------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWP-- 323
VW + L+ L F+ + +Q + L ++ WP
Sbjct: 253 VAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGYIDFDTDPWPVI 312
Query: 324 --------DKVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELK 369
K+ +R+ A + E +A + + + + + + +LK
Sbjct: 313 SDSAKDLIRKMLCSSPSERLTAHEVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLK 372
Query: 370 K-GLQRVGANLMDSEIDGL---MQAGDIDN------------------------------ 395
K L+ + +L + EI GL +A D DN
Sbjct: 373 KMALKVIAESLSEEEIAGLRAMFEAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLME 432
Query: 396 ------SGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL 449
SGT+DY EFIAA +HLNK++RE+H+ +AF YFDKDGSGYIT DELQ +C + G+
Sbjct: 433 AADVDNSGTIDYSEFIAATIHLNKLEREEHLVSAFQYFDKDGSGYITIDELQQSCIEHGM 492
Query: 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQ--DSGLGKKVFK 489
D LEDII+EVDQDNDGRIDY EFVAMMQ ++G+G++ K
Sbjct: 493 TDVFLEDIIKEVDQDNDGRIDYEEFVAMMQKGNAGVGRRTMK 534
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May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion-and Ca(2+)-permeable channels and stomatal closure. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38871|CDPK5_ARATH Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 315/550 (57%), Gaps = 103/550 (18%)
Query: 30 EDRLPPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPA 89
+D+L N+P D ++ S + S SD +P A Q NN++ P
Sbjct: 10 KDKLDEGDNNKPEDYSKTS--TTNLSSNSDHSPNAADIIA--QEFSKDNNSNNNSKDPAL 65
Query: 90 PVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVE 149
+P ++ + P + Q VLG KT N++++Y+L RKLGQGQFGTT+LC E
Sbjct: 66 VIPLREPIMRRNPDN---------QAYYVLGHKTPNIRDIYTLSRKLGQGQFGTTYLCTE 116
Query: 150 KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209
A+ ++ACKSI+KRKL ++EDVEDVRREI+IMHHLAGH +++ I GAYED++ VH+VME
Sbjct: 117 IASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIVME 176
Query: 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269
LCAGGELFDRIIQRGHY+ERKAA+LT+IIVGVVEACHSLGVMHRDLKPENFL +N+ ++
Sbjct: 177 LCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDF 236
Query: 270 PLKTIDFGLSMFFRPGLTFR-----------------------VW---LRLHFL------ 297
LK IDFGLS+FF+PG F VW + L+ L
Sbjct: 237 SLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKRYGPEADVWTAGVILYILLSGVPP 296
Query: 298 FFQKQRQSVLQTRLVRNLNEPGSLWP----------DKVAVPPIGDRVIAES------LS 341
F+ + +Q + L ++ WP ++ +R+ A +
Sbjct: 297 FWAETQQGIFDAVLKGYIDFESDPWPVISDSAKDLIRRMLSSKPAERLTAHEVLRHPWIC 356
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK-GLQRVGANLMDSEIDGL---MQAGDIDN-- 395
E +A + + + + + + +LKK L+ + +L + EI GL QA D DN
Sbjct: 357 ENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLREMFQAMDTDNSG 416
Query: 396 ----------------------------------SGTMDYGEFIAAMLHLNKIQREDHMY 421
SGT+DY EFIAA +HLNK++RE+H+
Sbjct: 417 AITFDELKAGLRKYGSTLKDTEIHDLMDAADVDNSGTIDYSEFIAATIHLNKLEREEHLV 476
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ-- 479
AAF YFDKDGSG+IT DELQ AC + G+ D LEDII+EVDQ+NDG+IDY EFV MMQ
Sbjct: 477 AAFQYFDKDGSGFITIDELQQACVEHGMADVFLEDIIKEVDQNNDGKIDYGEFVEMMQKG 536
Query: 480 DSGLGKKVFK 489
++G+G++ +
Sbjct: 537 NAGVGRRTMR 546
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|A5A7I7|CDPK4_SOLTU Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 284/488 (58%), Gaps = 97/488 (19%)
Query: 89 APVPQQQQEQSKKPAHVKRI---------SSAGLQVGSVLGRKTGNLKEMYSLGRKLGQG 139
+P QQ + K H + S Q V+G T N++++Y+LGRKLGQG
Sbjct: 44 SPTSNAQQNSNHKKEHSLSLVSPRKASMNRSGSNQAYYVMGHMTPNIRDLYTLGRKLGQG 103
Query: 140 QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE 199
QFGTT+LC E +T E+ACKSI+KRKL ++EDVEDVRREI+IMHHL+GH N++ I GAYE
Sbjct: 104 QFGTTYLCTENSTGAEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYE 163
Query: 200 DAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPEN 259
D + VH+VME+C+GGELFDRIIQRGHY+ERKAA+LT+IIVGVVEACHSLGVMHRDLKPEN
Sbjct: 164 DPLYVHIVMEICSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPEN 223
Query: 260 FLFINQQEEAPLKTIDFGLSMFFRPGLTFR-----------------------VW---LR 293
FL +N+ + LK IDFGLS+FF+PG F VW +
Sbjct: 224 FLLVNKDNDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVI 283
Query: 294 LHFL------FFQKQRQSVLQTRLVRNLNEPGSLWP----------DKVAVPPIGDRVIA 337
L+ L F+ + +Q + L +++ WP K+ +R+ A
Sbjct: 284 LYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISESAKDLIRKMLCMQPSERLTA 343
Query: 338 ES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK-GLQRVGANLMDSEIDGL--- 387
+ E +A + + + + + + +LKK L+ + +L + EI GL
Sbjct: 344 HEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREM 403
Query: 388 MQAGDIDNS------------------------------------GTMDYGEFIAAMLHL 411
+A D D+S GT+DYGEFIAA +HL
Sbjct: 404 FKAMDTDSSGAITFDELKAGLRKYGSTLKDTEIRELMDAADVDNSGTIDYGEFIAATVHL 463
Query: 412 NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDY 471
NK++RE+H+ AAF YFDKDGSGYIT DE+Q AC + + D EDIIREVDQDNDGRIDY
Sbjct: 464 NKLEREEHLMAAFQYFDKDGSGYITVDEVQQACIEHNMTDVYFEDIIREVDQDNDGRIDY 523
Query: 472 SEFVAMMQ 479
EFVAMMQ
Sbjct: 524 GEFVAMMQ 531
|
Regulates the production of reactive oxygen species (ROS) by NADPH oxidase. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SZM3|CDPKQ_ARATH Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/468 (45%), Positives = 284/468 (60%), Gaps = 88/468 (18%)
Query: 110 SAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE 169
S G Q VLG+KT +++++YSLG KLGQGQFGTT++C E +T +E+ACKSI KRKL ++
Sbjct: 4 SGGNQACYVLGQKTPSIRDLYSLGHKLGQGQFGTTYMCKEISTGREYACKSITKRKLISK 63
Query: 170 EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTER 229
EDVEDVRREI+IMHHLAG+ N++ I GAYED + VH+VMELC+GGELFDRIIQRGHY+ER
Sbjct: 64 EDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSER 123
Query: 230 KAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
KAA+L +IIVGVVEACHSLGVMHRDLKPENFL +N+ ++ LK IDFGLS+FF+PG F
Sbjct: 124 KAAELIKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFE 183
Query: 290 -----------------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNE 317
VW + L+ L F+ + +Q + L +++
Sbjct: 184 DVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILVSGVPPFWAETQQGIFDAVLKGHIDF 243
Query: 318 PGSLWP----------DKVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSG 361
WP + +R+ A + E +A + + + +
Sbjct: 244 DSDPWPLISDSAKNLIRGMLCSRPSERLTAHQVLRHPWICENGVAPDRALDPAVLSRLKQ 303
Query: 362 YITLEELKK-GLQRVGANLMDSEIDGL---MQAGDIDNSG-------------------- 397
+ + +LK+ L+ + +L + EI GL +A D DNSG
Sbjct: 304 FSAMNKLKQMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKD 363
Query: 398 ----------------TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
T+DYGEFIAA +HLNK++RE+H+ +AF YFDKDGSGYIT DELQ
Sbjct: 364 TEIRDLMEAADIDKSGTIDYGEFIAATIHLNKLEREEHLLSAFRYFDKDGSGYITIDELQ 423
Query: 442 TACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
AC + G+ D LED+I+EVDQDNDGRIDY EFVAMMQ +G+ + K
Sbjct: 424 HACAEQGMSDVFLEDVIKEVDQDNDGRIDYGEFVAMMQKGIVGRTMRK 471
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P28583|CDPK_SOYBN Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 203/467 (43%), Positives = 276/467 (59%), Gaps = 90/467 (19%)
Query: 113 LQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV 172
L+ VL ++T N++E+Y +GRKLGQGQFGTTF C +A+ +FACKSI KRKL +ED
Sbjct: 17 LKAAWVLPQRTQNIREVYEVGRKLGQGQFGTTFECTRRASGGKFACKSIPKRKLLCKEDY 76
Query: 173 EDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
EDV REI+IMHHL+ H NV++I G YED+ AVH+VMELC GGELFDRI+Q+GHY+ER+AA
Sbjct: 77 EDVWREIQIMHHLSEHANVVRIEGTYEDSTAVHLVMELCEGGELFDRIVQKGHYSERQAA 136
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF---- 288
L + IV VVEACHSLGVMHRDLKPENFLF E+A LK DFGLS+F++PG +F
Sbjct: 137 RLIKTIVEVVEACHSLGVMHRDLKPENFLFDTIDEDAKLKATDFGLSVFYKPGESFCDVV 196
Query: 289 -------------------RVW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGS 320
VW + L+ L F+ + + + L+ L+
Sbjct: 197 GSPYYVAPEVLRKLYGPESDVWSAGVILYILLSGVPPFWAESEPGIFRQILLGKLDFHSE 256
Query: 321 LWPD-----KVAVPPIGD-----RVIAES------LSEEEIAGLKEMFKMIDTDNSGYIT 364
WP K + + D R+ A + ++ IA K + + + +
Sbjct: 257 PWPSISDSAKDLIRKMLDQNPKTRLTAHEVLRHPWIVDDNIAPDKPLDSAVLSRLKQFSA 316
Query: 365 LEELKK-GLQRVGANLMDSEIDG---LMQAGDIDNSGT---------------------- 398
+ +LKK L+ + L + EI G L + D DNSGT
Sbjct: 317 MNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEI 376
Query: 399 --------------MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTAC 444
+DYGEFIAA +HLNK++RE+++ +AFSYFDKDGSGYIT DE+Q AC
Sbjct: 377 KDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQAC 436
Query: 445 QQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ--DSGLGKKVFK 489
+ FGLDD ++D+I+E+DQDNDG+IDY EF AMM+ + G+G++ +
Sbjct: 437 KDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMR 483
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Glycine max (taxid: 3847) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53684|CDPKB_ORYSJ Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/456 (44%), Positives = 268/456 (58%), Gaps = 88/456 (19%)
Query: 117 SVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR 176
+VLGRKT +L+E Y +GRKLGQGQFGTT+LC E T E+ACK+I KRKL T+EDVEDVR
Sbjct: 66 NVLGRKTADLREHYIIGRKLGQGQFGTTYLCTEINTGCEYACKTIPKRKLITKEDVEDVR 125
Query: 177 REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
REI+IMHHL+GH NV+ I YED AVH+VMELCAGGELFDRI ++GHY+ERKAA+L R
Sbjct: 126 REIQIMHHLSGHKNVVAIKDVYEDGQAVHIVMELCAGGELFDRIQEKGHYSERKAAELIR 185
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR------- 289
IIV +V CHSLGVMHRDLKPENFL +++ ++ +K IDFGLS+FF+PG F
Sbjct: 186 IIVSIVAMCHSLGVMHRDLKPENFLLLDKDDDLSIKAIDFGLSVFFKPGQVFTELVGSPY 245
Query: 290 ----------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWPD 324
VW + L+ L F+ + +Q + L +++ WP
Sbjct: 246 YVAPEVLHKRYGPESDVWSAGVILYVLLSGVPPFWAETQQGIFDAVLKGHIDFQSDPWPK 305
Query: 325 ----------KVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEEL 368
K+ +R+ A + E +A + + + + + + +L
Sbjct: 306 ISDSAKDLIRKMLSHCPSERLKAHEVLRHPWICENGVATDQALDPSVISRLKQFSAMNKL 365
Query: 369 KK-GLQRVGANLMDSEIDGL---MQAGDIDNSGTMDYG---------------------- 402
KK L+ + L + EI GL +A D N G + +G
Sbjct: 366 KKLALRVIAERLSEEEIAGLREMFKAVDTKNRGVITFGELREGLRRFGAEFKDTEIGDIM 425
Query: 403 --------------EFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
EFIAA L LNKI+RE+H+ AAF+YFDKDGSGYIT D+LQ AC +
Sbjct: 426 EAAHNDNNVTIHYEEFIAATLPLNKIEREEHLLAAFTYFDKDGSGYITVDKLQRACGEHN 485
Query: 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484
++D+ LE+II EVDQ+NDG+IDY+EFVAMMQ S +G
Sbjct: 486 MEDSLLEEIISEVDQNNDGQIDYAEFVAMMQGSNVG 521
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 489 | ||||||
| 225439329 | 568 | PREDICTED: calcium-dependent protein kin | 0.977 | 0.841 | 0.547 | 1e-159 | |
| 356537258 | 595 | PREDICTED: calcium-dependent protein kin | 0.995 | 0.818 | 0.525 | 1e-154 | |
| 224091481 | 598 | calcium dependent protein kinase 2 [Popu | 0.989 | 0.809 | 0.510 | 1e-154 | |
| 296089332 | 552 | unnamed protein product [Vitis vinifera] | 0.940 | 0.833 | 0.535 | 1e-153 | |
| 224138234 | 587 | calcium dependent protein kinase 20 [Pop | 0.977 | 0.814 | 0.508 | 1e-149 | |
| 255546755 | 578 | calcium-dependent protein kinase, putati | 0.957 | 0.809 | 0.512 | 1e-149 | |
| 164472670 | 461 | calcium-dependent protein kinase [Tritic | 0.766 | 0.813 | 0.628 | 1e-148 | |
| 449437514 | 585 | PREDICTED: calcium-dependent protein kin | 0.991 | 0.829 | 0.523 | 1e-145 | |
| 225463739 | 569 | PREDICTED: calcium-dependent protein kin | 0.946 | 0.813 | 0.498 | 1e-142 | |
| 224097538 | 579 | predicted protein [Populus trichocarpa] | 0.950 | 0.803 | 0.502 | 1e-142 |
| >gi|225439329|ref|XP_002267735.1| PREDICTED: calcium-dependent protein kinase 20 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/577 (54%), Positives = 366/577 (63%), Gaps = 99/577 (17%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGNTCVGPNL +NGFLQSV+AAVWRTRPPED LPPP + S + SD
Sbjct: 1 MGNTCVGPNLAANGFLQSVSAAVWRTRPPEDMLPPPNADGSSSG---------DNAGSDG 51
Query: 61 APAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLG 120
A P P P+QSTPP VKI Q +Q KK H+KR+SSAGLQ+ SVL
Sbjct: 52 AKGSDP-PMPVQSTPPETVKITAEVQKAEKSDGNSGKQ-KKQTHMKRLSSAGLQIDSVLQ 109
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
R T NLKE+YSLGRKLGQGQFGTT+LCVEKA KEFACKSIAKRKLTT EDVEDVRREI+
Sbjct: 110 RNTENLKEIYSLGRKLGQGQFGTTYLCVEKANGKEFACKSIAKRKLTTREDVEDVRREIQ 169
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
IMHHLAGHPNVI IVGA+EDAVAVHVVMELC GGELFDRIIQRGHYTERKAADL R+IVG
Sbjct: 170 IMHHLAGHPNVISIVGAFEDAVAVHVVMELCVGGELFDRIIQRGHYTERKAADLARVIVG 229
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR----------- 289
VVEACHSLGVMHRDLKPENFLFINQ E++PLKTIDFGLSMFFRPG F
Sbjct: 230 VVEACHSLGVMHRDLKPENFLFINQDEDSPLKTIDFGLSMFFRPGEIFTEVVGSPYYVAP 289
Query: 290 ------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWPD---- 324
VW + ++ L F+ + Q + + L +L+ WP
Sbjct: 290 EVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGDLDFVSEPWPSISDS 349
Query: 325 ------KVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK-G 371
K+ V R+ A + +A K + + T + + +LKK
Sbjct: 350 AKDLVRKMLVRDPKKRLTAHEVLCHPWVQVNGVAPDKPLDSAVLTRLKQFSAMNKLKKIA 409
Query: 372 LQRVGANLMDSEIDGL---MQAGDIDNS-------------------------------- 396
++ + +L + EI GL + D+DNS
Sbjct: 410 IRVIAESLSEEEIAGLKEMFKMIDVDNSGNITLEELKTGLERVGADLKDSEIIRLMQAAD 469
Query: 397 ----GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT 452
GT+DYGEF+AAMLHLNKI++EDH+YAAFSYFDKDGSGYIT DELQ AC+QFGL+
Sbjct: 470 IDNSGTIDYGEFVAAMLHLNKIEKEDHLYAAFSYFDKDGSGYITQDELQQACEQFGLEAI 529
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
LED+IREVDQDNDGRIDYSEFVAMMQD GKK +K
Sbjct: 530 HLEDVIREVDQDNDGRIDYSEFVAMMQDRDFGKKGYK 566
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356537258|ref|XP_003537146.1| PREDICTED: calcium-dependent protein kinase 20-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 313/596 (52%), Positives = 375/596 (62%), Gaps = 109/596 (18%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGN CVGPN+ NGFLQSVTAAVW+TRPPE+RLPPP + A + +D+
Sbjct: 1 MGNNCVGPNV-GNGFLQSVTAAVWKTRPPENRLPPPNAEAKAPGGSAPSTATTTTNTADS 59
Query: 61 APAPAPTP-TPIQSTPPPPVKI-------------------NNNRQPPAPVPQQQQEQSK 100
+ +P P P P+QSTPP PVK+ +++ P P Q+K
Sbjct: 60 SKSPEPPPGMPVQSTPPEPVKMPAAAADAAKPLPLKPEKPASSHAMEPVPGGGDNNHQTK 119
Query: 101 KPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKS 160
KP H+KR+SS GLQV SVLGRKT N+KE +SLGRKLGQGQFGTTFLCV+K T K+FACKS
Sbjct: 120 KPTHLKRVSSVGLQVESVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKS 179
Query: 161 IAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI 220
IAKRKLTT+EDVEDVRREI+IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI
Sbjct: 180 IAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI 239
Query: 221 IQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
IQRGHYTERKAA+L R+I+ VVEACHSLGVMHRDLKPENFLFIN +EE+PLKTIDFGLS+
Sbjct: 240 IQRGHYTERKAAELARLILNVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSV 299
Query: 281 FFRPGLTFR-----------------------VW---LRLHFL------FFQKQRQSVLQ 308
FFRPG TF VW + ++ L F+ + Q + +
Sbjct: 300 FFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFE 359
Query: 309 TRLVRNLNEPGSLWP-------DKVAVPPIGD---RVIAESLSEE---EIAGL---KEMF 352
L L+ WP D V I D R+ A + ++ G+ K +
Sbjct: 360 QVLKGELDFISEPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVGGVAPDKPLD 419
Query: 353 KMIDTDNSGYITLEELKK-GLQRVGANLMDSEIDGL---MQAGDIDNS------------ 396
+ T + + +LKK ++ + NL + EI GL + D DNS
Sbjct: 420 SAVLTRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGL 479
Query: 397 ------------------------GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGS 432
GT+DYGEF+AAMLHLNKIQ+EDH+YAAF+YFDKDGS
Sbjct: 480 ERVGSVLKDSEITWLMEAADVDNSGTIDYGEFLAAMLHLNKIQKEDHLYAAFTYFDKDGS 539
Query: 433 GYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVF 488
GYIT DELQ AC+QFGL D L+DII E+D+DNDGRIDYSEF AMMQD+ GK F
Sbjct: 540 GYITKDELQQACEQFGLKDYHLDDIICEIDKDNDGRIDYSEFAAMMQDTDFGKMGF 595
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091481|ref|XP_002309269.1| calcium dependent protein kinase 2 [Populus trichocarpa] gi|222855245|gb|EEE92792.1| calcium dependent protein kinase 2 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/593 (51%), Positives = 378/593 (63%), Gaps = 109/593 (18%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERS----LKAKDQSK 56
MGNTCVGPNL +NGF +VTAA+WR+RPPEDRL P + S N S + +S+
Sbjct: 1 MGNTCVGPNLGNNGFFNTVTAAIWRSRPPEDRLHLPKGEDSSKNNGDSEAGPVGGSKKSE 60
Query: 57 ASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQ----------------QQEQSK 100
S P P +Q+TPP PVK+ N PP + + ++++ K
Sbjct: 61 GSKKGSNDHP-PILVQNTPPEPVKMPNEAPPPKVIEHEKSIKQEMREVGIGQPGEEQKGK 119
Query: 101 KPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKS 160
KP HVKR+SS LQ+ SVLGRKTGNLK++YSLGRKLGQGQFGTTFLC+EKAT KEFACKS
Sbjct: 120 KPTHVKRVSSVALQMESVLGRKTGNLKDIYSLGRKLGQGQFGTTFLCIEKATGKEFACKS 179
Query: 161 IAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI 220
IAKRKLTT+EDV+DVRREI+IMHHL GHPNVI+IV AYEDAVAVHVVMELC+GGELFDRI
Sbjct: 180 IAKRKLTTQEDVDDVRREIQIMHHLEGHPNVIKIVDAYEDAVAVHVVMELCSGGELFDRI 239
Query: 221 IQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
++RGHYTE++AA+L R+IVGVVEACHSLGVMHRDLKPENFLF++Q+EE+PL+TIDFGLS+
Sbjct: 240 VRRGHYTEKQAAELARLIVGVVEACHSLGVMHRDLKPENFLFVSQEEESPLQTIDFGLSV 299
Query: 281 FFRPGLTFR-----------------------VW---LRLHFL------FFQKQRQSVLQ 308
FFRPG TF VW + ++ L F+ + Q + +
Sbjct: 300 FFRPGETFTDIVGSPYYVAPEVLRKLYGPKCDVWSAGVIIYILLSGVPPFWDETEQGIFE 359
Query: 309 TRLVRNLNEPGSLWPD----------KVAVPPIGDRVIAES------LSEEEIAGLKEMF 352
L L+ WP+ K+ V R+ A + E +A + +
Sbjct: 360 QVLKGELDFESEPWPNISESAKDLVRKMLVRDPKRRLTAHEVLCHPWVQMEGVAPDRPLD 419
Query: 353 KMIDTDNSGYITLEELKKGLQRVGA-NLMDSEIDGL---MQAGDIDNSG----------- 397
+ + + + LKK + RV A +L + EI GL + D DNSG
Sbjct: 420 SAVLSRLMQFSAMNRLKKIVIRVIAESLSEEEIAGLKEMFKMIDADNSGHITLEELKTGL 479
Query: 398 -------------------------TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGS 432
T+DYGEF+AAMLHLNKI++EDH+YAAFSYFD+DGS
Sbjct: 480 EKVGANTKDSEIAGLMQAADVDNSGTIDYGEFVAAMLHLNKIEKEDHLYAAFSYFDQDGS 539
Query: 433 GYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGK 485
GYIT DELQ AC++FGL D QL++IIREVDQD+DGRIDYSEFVAMMQD+G G+
Sbjct: 540 GYITKDELQQACEKFGLGDVQLDEIIREVDQDDDGRIDYSEFVAMMQDTGFGQ 592
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089332|emb|CBI39104.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 310/579 (53%), Positives = 360/579 (62%), Gaps = 119/579 (20%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPS--DNTERSLKAKDQSKAS 58
MGNTCVGPNL +NGFLQSV+AAVWRTRPPED LPPP + S DN D +K S
Sbjct: 1 MGNTCVGPNLAANGFLQSVSAAVWRTRPPEDMLPPPNADGSSSGDNA-----GSDGAKGS 55
Query: 59 DTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSV 118
D PP+ P A + KK H+KR+SSAGLQ+ SV
Sbjct: 56 D-----------------PPM-------PKAEKSDGNSGKQKKQTHMKRLSSAGLQIDSV 91
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
L R T NLKE+YSLGRKLGQGQFGTT+LCVEKA KEFACKSIAKRKLTT EDVEDVRRE
Sbjct: 92 LQRNTENLKEIYSLGRKLGQGQFGTTYLCVEKANGKEFACKSIAKRKLTTREDVEDVRRE 151
Query: 179 IRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
I+IMHHLAGHPNVI IVGA+EDAVAVHVVMELC GGELFDRIIQRGHYTERKAADL R+I
Sbjct: 152 IQIMHHLAGHPNVISIVGAFEDAVAVHVVMELCVGGELFDRIIQRGHYTERKAADLARVI 211
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR--------- 289
VGVVEACHSLGVMHRDLKPENFLFINQ E++PLKTIDFGLSMFFRPG F
Sbjct: 212 VGVVEACHSLGVMHRDLKPENFLFINQDEDSPLKTIDFGLSMFFRPGEIFTEVVGSPYYV 271
Query: 290 --------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWPD-- 324
VW + ++ L F+ + Q + + L +L+ WP
Sbjct: 272 APEVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGDLDFVSEPWPSIS 331
Query: 325 --------KVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370
K+ V R+ A + +A K + + T + + +LKK
Sbjct: 332 DSAKDLVRKMLVRDPKKRLTAHEVLCHPWVQVNGVAPDKPLDSAVLTRLKQFSAMNKLKK 391
Query: 371 -GLQRVGANLMDSEIDGL---MQAGDIDNS------------------------------ 396
++ + +L + EI GL + D+DNS
Sbjct: 392 IAIRVIAESLSEEEIAGLKEMFKMIDVDNSGNITLEELKTGLERVGADLKDSEIIRLMQA 451
Query: 397 ------GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD 450
GT+DYGEF+AAMLHLNKI++EDH+YAAFSYFDKDGSGYIT DELQ AC+QFGL+
Sbjct: 452 ADIDNSGTIDYGEFVAAMLHLNKIEKEDHLYAAFSYFDKDGSGYITQDELQQACEQFGLE 511
Query: 451 DTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
LED+IREVDQDNDGRIDYSEFVAMMQD GKK +K
Sbjct: 512 AIHLEDVIREVDQDNDGRIDYSEFVAMMQDRDFGKKGYK 550
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138234|ref|XP_002322763.1| calcium dependent protein kinase 20 [Populus trichocarpa] gi|222867393|gb|EEF04524.1| calcium dependent protein kinase 20 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 299/588 (50%), Positives = 367/588 (62%), Gaps = 110/588 (18%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERS----LKAKDQSK 56
MGNTCVGPNL + GFL SVTAA+WR+RPPEDRLP P + S+N S + +S+
Sbjct: 1 MGNTCVGPNLGNKGFLNSVTAAIWRSRPPEDRLPSPKGGDGSNNNGDSNAGLIGGSKKSE 60
Query: 57 ASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQ-----------------QEQS 99
S P+ P+Q+TPP PVK+ N PP + + +++
Sbjct: 61 GSRKGSTDHPS-MPVQNTPPEPVKMLNEAPPPPKFIEHEKSIKPEMRDVGIGKPGEEQKE 119
Query: 100 KKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACK 159
KKP HVKR+SS LQ+ SVLGRKTGNLK++YSLGRKLGQGQFGTTFLCVEKAT KEFACK
Sbjct: 120 KKPTHVKRVSSIALQMESVLGRKTGNLKDIYSLGRKLGQGQFGTTFLCVEKATGKEFACK 179
Query: 160 SIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDR 219
+IAKRKLTT EDVEDVRREI+IMHHL GHPNVI+IV AYEDAVAVHVVMELC+GGELFDR
Sbjct: 180 TIAKRKLTTPEDVEDVRREIQIMHHLEGHPNVIRIVDAYEDAVAVHVVMELCSGGELFDR 239
Query: 220 IIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
I+QRGHYTE+KAA+L R+IVGVVEACHSLGVMHRDLKPENFLF++Q+E++PLKTIDFGLS
Sbjct: 240 IVQRGHYTEKKAAELARLIVGVVEACHSLGVMHRDLKPENFLFVSQEEDSPLKTIDFGLS 299
Query: 280 MFFRPGLTFR-----------------------VW---LRLHFL------FFQKQRQSVL 307
+FFRPG T VW + ++ L F+ + Q +
Sbjct: 300 VFFRPGETLTDVVGSPYYVAPDVLRKLYGPKCDVWSAGVIIYILLSGVPPFWDESEQGIF 359
Query: 308 QTRLVRNLNEPGSLWPD----------KVAVPPIGDRVIAES------LSEEEIAGLKEM 351
+ L L+ WP+ K+ V R+ A + E +A + +
Sbjct: 360 EQVLKGELDFESEPWPNISESAKDLVRKMLVRDPKKRLTAHEVLCHPWVKMEGVALDRPL 419
Query: 352 FKMIDTDNSGYITLEELKK-GLQRVGANLMDSEIDGL---MQAGDIDNSGTMDYGEF--- 404
+ + + + +LKK ++ + +L + EI GL + D D+SG + E
Sbjct: 420 DPAVLSRLKKFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFKMIDTDSSGHITLEELKTG 479
Query: 405 ---------------------------------IAAMLHLNKIQREDHMYAAFSYFDKDG 431
IAAMLHLNKI +EDH+Y+AFSYFDKDG
Sbjct: 480 LERVGANIKDSELAGLMQAADVDNSGTIDYGEFIAAMLHLNKIVKEDHLYSAFSYFDKDG 539
Query: 432 SGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
SGYIT DELQ AC+QFGL D QLE+IIREVDQDNDGRIDYSEFVAMMQ
Sbjct: 540 SGYITQDELQQACEQFGLGDVQLEEIIREVDQDNDGRIDYSEFVAMMQ 587
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546755|ref|XP_002514436.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223546432|gb|EEF47932.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 293/572 (51%), Positives = 359/572 (62%), Gaps = 104/572 (18%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGNTCVGP ++ NGF QSV+AA+WR+R PE S+ + DT
Sbjct: 1 MGNTCVGPTISKNGFFQSVSAAMWRSRSPEG----------------SVSQANGESVHDT 44
Query: 61 APAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLG 120
+P P+QS PP V I +P P +Q + KK +KR++SAGL+V SVL
Sbjct: 45 TSKEPESPLPVQSNPPQQVVIPKPEKPEKPGNPEQPSKPKKAPQIKRVASAGLKVDSVLQ 104
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
KTGN KE YSLG+KLGQGQFGTTFLCVEKAT KE+ACKSIAKRKL T+EDVEDVRREI+
Sbjct: 105 TKTGNFKEFYSLGKKLGQGQFGTTFLCVEKATGKEYACKSIAKRKLLTDEDVEDVRREIQ 164
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
IMHHLAGHPNVI I GAYEDA+AVHVVMELCAGGELFDRIIQRGHY+ER+AA+LTR IVG
Sbjct: 165 IMHHLAGHPNVISIKGAYEDAIAVHVVMELCAGGELFDRIIQRGHYSERQAAELTRTIVG 224
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR----------- 289
VVEACHSLGVMHRDLKPENFLF+NQ+E++ LKTIDFGLS+FF+PG F
Sbjct: 225 VVEACHSLGVMHRDLKPENFLFVNQKEDSLLKTIDFGLSIFFKPGEKFNDVVGSPYYVAP 284
Query: 290 ------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWP----- 323
VW + ++ L F+ + Q + + L +L+ WP
Sbjct: 285 EVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFEHVLHGDLDFSSDPWPSISEG 344
Query: 324 --DKVAVPPIGD---RVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK-G 371
D V + D R+ A + E+ +A K M + + + + +LKK
Sbjct: 345 AKDLVKRMLLRDPRRRLTAHEVLCHPWVQEDGVAPDKPMDSAVLSRMKQFSAMNKLKKMA 404
Query: 372 LQRVGANLMDSEIDGL---------------------------------------MQAGD 392
L+ + +L + EI GL MQA D
Sbjct: 405 LRVIAESLSEEEIAGLKEMFKMIDTDNSGTISFDELKAGLKRVGANLKESEIYDLMQAAD 464
Query: 393 IDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT 452
+DNSGT+DYGEFIAA LHLNKI+REDH++AAFSYFDKDGSGYITPDELQ AC++FGL+D
Sbjct: 465 VDNSGTIDYGEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITPDELQQACEEFGLEDF 524
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484
+LE++IREVDQDNDG IDY+EFVAMMQ +G
Sbjct: 525 RLEEMIREVDQDNDGLIDYNEFVAMMQKGNVG 556
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|164472670|gb|ABY59016.1| calcium-dependent protein kinase [Triticum aestivum] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/431 (62%), Positives = 320/431 (74%), Gaps = 56/431 (12%)
Query: 110 SAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE 169
SAGL VGSVL RKT ++KE YSLGR+LGQGQFGTT+LCVE+++ KE+ACKSI KRKL T+
Sbjct: 1 SAGLLVGSVLKRKTESVKEKYSLGRRLGQGQFGTTYLCVERSSGKEYACKSILKRKLVTD 60
Query: 170 EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTER 229
+DVEDVRREI+IM+HLAGHPNVI I GAYEDAVAVH+VMELCAGGELFDRI+Q+GHYTER
Sbjct: 61 DDVEDVRREIQIMYHLAGHPNVISIRGAYEDAVAVHLVMELCAGGELFDRIVQKGHYTER 120
Query: 230 KAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
KAA+L R+IVGVVE CHS+GVMHRDLKPENFLF++Q EEA LKTIDFGLS+FFRPG F
Sbjct: 121 KAAELARVIVGVVEVCHSMGVMHRDLKPENFLFVDQTEEAALKTIDFGLSVFFRPGQIFT 180
Query: 290 -----------------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNE 317
VW + ++ L F+ + Q + + L L+
Sbjct: 181 DVVGSPYYVAPEVLKKKYGPEADVWSAGVIIYILLCGVPPFWAENEQRIFEEVLHGKLDF 240
Query: 318 PGSLWP-------DKV---------------AVPPIGDRVIAESLSEEEIAGLKEMFKMI 355
WP D V V + +VIAE+LSE+EIAGLKEMFKMI
Sbjct: 241 ESDPWPSISEGAKDLVRRMLLRDPKKRLTAHEVLRVSVQVIAENLSEDEIAGLKEMFKMI 300
Query: 356 DTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQ 415
D+DNSG IT EELK GL++VGANL +SEI LMQA D+D SGT+DYGEFIAA LHLNK++
Sbjct: 301 DSDNSGQITYEELKVGLKKVGANLQESEIYALMQAADVDKSGTIDYGEFIAATLHLNKVE 360
Query: 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGL--DDTQLEDIIREVDQDNDGRIDYSE 473
REDH++AAF YFDKDGSGYITPDELQ AC++FGL DD L+++IREVDQDNDGRIDY+E
Sbjct: 361 REDHLFAAFQYFDKDGSGYITPDELQLACEEFGLGSDDLSLDNMIREVDQDNDGRIDYNE 420
Query: 474 FVAMMQDSGLG 484
FVAMMQ LG
Sbjct: 421 FVAMMQKPALG 431
|
Source: Triticum aestivum Species: Triticum aestivum Genus: Triticum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449437514|ref|XP_004136537.1| PREDICTED: calcium-dependent protein kinase 20-like [Cucumis sativus] gi|449514809|ref|XP_004164486.1| PREDICTED: calcium-dependent protein kinase 20-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 307/586 (52%), Positives = 369/586 (62%), Gaps = 101/586 (17%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGNTCVGPNL +NGFL+SVTAAVW +RPPE+RLPPP S + +S
Sbjct: 1 MGNTCVGPNLANNGFLKSVTAAVWPSRPPEERLPPPKDGTESKSKTNESSDSSKSADDSK 60
Query: 61 APAPAPTPTPIQSTPPPPVKINNN-------RQPPAPVPQQQQE-----QSKKPAHVKRI 108
P QSTPP VKI NN R+ + V + + +SKK H+KR+
Sbjct: 61 DSEPQK-DVQTQSTPPETVKIGNNDQNKVVEREMSSRVIKDETRAPEGTKSKKATHIKRL 119
Query: 109 SSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT 168
SSAGLQ+ SVLGRKT N+K+ Y+LGRKLGQGQFGTTFLCVEKA+ K+FACKSIAKRKLTT
Sbjct: 120 SSAGLQIDSVLGRKTDNIKDHYTLGRKLGQGQFGTTFLCVEKASGKDFACKSIAKRKLTT 179
Query: 169 EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTE 228
+EDVEDVRREI+IMHHLAGHPNVIQIVGA+EDAVAVHVVMELCAGGELFDRIIQRGHYTE
Sbjct: 180 KEDVEDVRREIQIMHHLAGHPNVIQIVGAFEDAVAVHVVMELCAGGELFDRIIQRGHYTE 239
Query: 229 RKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
RKAA L RIIVGVVEACHSLGVMHRDLKPENFLFINQ+EE+ LKTIDFGLSMFFRPG TF
Sbjct: 240 RKAAQLARIIVGVVEACHSLGVMHRDLKPENFLFINQEEESALKTIDFGLSMFFRPGETF 299
Query: 289 R-----------------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLN 316
VW + ++ L F+ + Q + + L L+
Sbjct: 300 TDVVGSPYYVAPEVLRKLYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELD 359
Query: 317 EPGSLWPD----------KVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNS 360
WP ++ V R+ A + + +A K + + + +
Sbjct: 360 FISEPWPSISGEAKELVRRMLVRDPKKRLTAHEVLCHPWVKSDGVAPDKPLDSAVLSRLN 419
Query: 361 GYITLEELKK-GLQRVGANLMDSEIDGL---MQAGDIDNSGTMDYGE------------- 403
+ + LKK ++ + +L + EI GL + D DNSG + E
Sbjct: 420 QFSAMNRLKKIAIRVIAESLSEEEIAGLKEMFKMIDTDNSGQITLEELKHGLERVGANLK 479
Query: 404 -----------------------FIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDEL 440
F+AAMLHLNKIQ+EDH++AAFSYFDKDGSGYIT DEL
Sbjct: 480 DSEISGLMQAADVDNSGTIEYGEFVAAMLHLNKIQKEDHLFAAFSYFDKDGSGYITQDEL 539
Query: 441 QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKK 486
Q AC++FGL D +LEDI+REVDQDNDGRIDYSEFVAMMQD+G G++
Sbjct: 540 QQACEKFGLSDFRLEDIMREVDQDNDGRIDYSEFVAMMQDTGFGRR 585
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225463739|ref|XP_002265450.1| PREDICTED: calcium-dependent protein kinase 1 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 287/576 (49%), Positives = 358/576 (62%), Gaps = 113/576 (19%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGNTCVGP+++ NGF QSV+AA+WR+R PE + + + D+ +A+
Sbjct: 1 MGNTCVGPSISKNGFFQSVSAAMWRSRAPE-----------GSASYTNGETMDEPQATTK 49
Query: 61 APAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLG 120
P +P P+Q+ PP + I QP P KKP +KR+SSAGL++ SVL
Sbjct: 50 EPG---SPLPVQNKPPEQMTIPKEEQPTKP---------KKPHQIKRVSSAGLRIESVLQ 97
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
KTGN KE + LGRKLGQGQFGTTFLCV+KAT+KE+ACKSIAKRKL T+EDVEDVRREI+
Sbjct: 98 TKTGNFKEFFILGRKLGQGQFGTTFLCVQKATRKEYACKSIAKRKLLTDEDVEDVRREIQ 157
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
IMHHLAGHPNVI I GAYEDAVAVHVVMELC GGELFDRIIQ GHYTERKAA+LTR IVG
Sbjct: 158 IMHHLAGHPNVISIEGAYEDAVAVHVVMELCKGGELFDRIIQHGHYTERKAAELTRTIVG 217
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR----------- 289
VVEACHSLGVMHRDLKPENFL +N++E++ LKTIDFGLS+FF+PG F
Sbjct: 218 VVEACHSLGVMHRDLKPENFLLVNEEEDSLLKTIDFGLSVFFKPGEKFTDVVGSPYYVAP 277
Query: 290 ------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWPD---- 324
VW + L+ L F+ + Q + + L +L+ WP
Sbjct: 278 EVLRKRYGPEADVWSAGVILYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISES 337
Query: 325 ------KVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK-G 371
++ V R+ A + + +A K + + + + + +LKK
Sbjct: 338 AKDLVRRMLVRDPRRRLTAHEVLCHPWVQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMA 397
Query: 372 LQRVGANLMDSEIDGL---MQAGDIDNS-------------------------------- 396
L + NL + EI GL + D DNS
Sbjct: 398 LIVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKAGLKRVGANLKESEIYDLMHAAD 457
Query: 397 ----GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT 452
GT+DYGEFIAA LHLNK++REDH++AAFSYFDKDGSGYITPDELQ AC++FGL+D
Sbjct: 458 VDNNGTIDYGEFIAATLHLNKVEREDHLFAAFSYFDKDGSGYITPDELQQACEEFGLEDV 517
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQ--DSGLGKK 486
+LE++IREVDQDNDGRIDY+EFVAMMQ + G+GKK
Sbjct: 518 RLEEMIREVDQDNDGRIDYNEFVAMMQKGNPGIGKK 553
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224097538|ref|XP_002310978.1| predicted protein [Populus trichocarpa] gi|222850798|gb|EEE88345.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/567 (50%), Positives = 353/567 (62%), Gaps = 102/567 (17%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDT 60
MGNTCVGP+++ NGF QSV+AA+WRTR P+D + N E + + S+ S+
Sbjct: 1 MGNTCVGPSISKNGFFQSVSAAMWRTRSPDDSIS-------QTNGESVHELEAVSRESEP 53
Query: 61 APAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLG 120
P P+QS PP + I P + + KKP VKR+SSAGL+ SVL
Sbjct: 54 -------PLPVQSKPPEQMTIPKPEAPEKSEKSDEPAKPKKPPQVKRVSSAGLRTESVLK 106
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
K GNLKE +SLG+KLGQGQFGTTFLCVEKAT+KEFACKSIAKRKL T+EDVEDVRREI
Sbjct: 107 TKAGNLKEFFSLGKKLGQGQFGTTFLCVEKATKKEFACKSIAKRKLLTDEDVEDVRREIS 166
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
IMHHLAGHPNVI I GAYEDAVAVHVVME+CAGGELFDRII+RGHYTERKAA+LTR IVG
Sbjct: 167 IMHHLAGHPNVISIKGAYEDAVAVHVVMEICAGGELFDRIIKRGHYTERKAAELTRTIVG 226
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR----------- 289
VVEACHSLGVMHRDLKPENFLF+NQ+E++ LKTIDFGLS+FF+PG F
Sbjct: 227 VVEACHSLGVMHRDLKPENFLFVNQKEDSLLKTIDFGLSIFFKPGERFHDVVGSPYYVAP 286
Query: 290 ------------VW---LRLHFL------FFQKQRQSVLQTRLVRNLNEPGSLWPD---- 324
VW + ++ L F+ + Q + + L +L+ WP
Sbjct: 287 EVLKKRYGPEADVWSAGVIIYILLSGVPPFWAETEQEIFEQVLHGDLDFSSDPWPSISES 346
Query: 325 ------KVAVPPIGDRVIAES------LSEEEIAGLKEMFKMIDTDNSGYITLEELKK-G 371
++ V R+ A + E+ +A K + + + + + +LKK
Sbjct: 347 AKDLVRRMLVRDPRRRLTAHEVLCHPWVHEDGVAPDKPLDSAVLSRLKQFSAMNKLKKMA 406
Query: 372 LQRVGANLMDSEIDGL---MQAGDIDNSG------------------------------- 397
L+ + L + EI GL + D D SG
Sbjct: 407 LRIIAETLSEEEIAGLKEMFKMIDSDGSGQITFEELKAGLKRVGANLKESEIYDLMQAAD 466
Query: 398 -----TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT 452
T+DYGEFIAA LHLNKI+R+DH++AAFSYFDKDGSGYITPDELQ AC++FG+ D
Sbjct: 467 VDNSGTIDYGEFIAATLHLNKIERQDHLFAAFSYFDKDGSGYITPDELQQACEEFGIGDV 526
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+LE++I+EVDQDNDGRIDY+EFVAMMQ
Sbjct: 527 RLEEMIKEVDQDNDGRIDYNEFVAMMQ 553
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 489 | ||||||
| TAIR|locus:2065021 | 583 | CPK20 "calcium-dependent prote | 0.588 | 0.493 | 0.595 | 1.9e-153 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.386 | 0.309 | 0.761 | 1.7e-143 | |
| TAIR|locus:2075885 | 646 | CPK2 "calmodulin-domain protei | 0.386 | 0.292 | 0.719 | 8.1e-142 | |
| TAIR|locus:2827528 | 544 | CPK6 "calcium dependent protei | 0.351 | 0.316 | 0.656 | 3.7e-116 | |
| TAIR|locus:2122063 | 556 | CPK5 "calmodulin-domain protei | 0.349 | 0.307 | 0.660 | 1.4e-114 | |
| TAIR|locus:2014691 | 495 | CDPK2 "AT1G35670" [Arabidopsis | 0.310 | 0.307 | 0.712 | 1.1e-110 | |
| TAIR|locus:2136917 | 501 | CPK4 "calcium-dependent protei | 0.310 | 0.303 | 0.705 | 4.4e-109 | |
| TAIR|locus:2171726 | 490 | CDPK9 "calmodulin-like domain | 0.349 | 0.348 | 0.608 | 2.5e-104 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.357 | 0.331 | 0.582 | 1.1e-101 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.357 | 0.334 | 0.565 | 2.2e-101 |
| TAIR|locus:2065021 CPK20 "calcium-dependent protein kinase 20" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 858 (307.1 bits), Expect = 1.9e-153, Sum P(2) = 1.9e-153
Identities = 174/292 (59%), Positives = 199/292 (68%)
Query: 1 MGNTCVGPNLNSNGFLQSVTAAVWRTXXXXXXXXXXXXXXXSDNTERSLKAKDQSKASDX 60
MGNTCVGPNLN NGFLQSV+AAVWR ++S+ D +
Sbjct: 1 MGNTCVGPNLNPNGFLQSVSAAVWRNQKPDDSIKSSKDESSRKKNDKSVNGDDSNGHVSS 60
Query: 61 XXXXXXXXXXXXXXXXXXVKINNN----RXXXXXXXXXXXXXSKKPAHVKRISSAGLQVG 116
VK+ N + KK AH+KR++SAGLQ+
Sbjct: 61 TVDPAPSTLPTPSTPPPPVKMANEEPPPKPITENKEDPNSKPQKKEAHMKRMASAGLQID 120
Query: 117 SVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXX 176
SVLGRKT NLK++YS+GRKLGQGQFGTTFLCV+K T KEFACK+IAKRKL
Sbjct: 121 SVLGRKTENLKDIYSVGRKLGQGQFGTTFLCVDKKTGKEFACKTIAKRKLTTPEDVEDVR 180
Query: 177 XXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
MHHL+GHPNVIQIVGAYEDAVAVHVVME+CAGGELFDRIIQRGHYTE+KAA+L R
Sbjct: 181 REIQIMHHLSGHPNVIQIVGAYEDAVAVHVVMEICAGGELFDRIIQRGHYTEKKAAELAR 240
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
IIVGV+EACHSLGVMHRDLKPENFLF++ EEA LKTIDFGLS+FF+PG TF
Sbjct: 241 IIVGVIEACHSLGVMHRDLKPENFLFVSGDEEAALKTIDFGLSVFFKPGETF 292
|
|
| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 739 (265.2 bits), Expect = 1.7e-143, Sum P(3) = 1.7e-143
Identities = 144/189 (76%), Positives = 155/189 (82%)
Query: 100 KKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACK 159
KKP H+KR+SSAGL+ SVL RKT N KE YSLGRKLGQGQFGTTFLCVEK T KEFACK
Sbjct: 120 KKPKHMKRVSSAGLRTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACK 179
Query: 160 SIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDR 219
SIAKRKL MHHLAGHPNVI I GAYED VAVH+VME CAGGELFDR
Sbjct: 180 SIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDR 239
Query: 220 IIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
IIQRGHYTERKAA+LTR IVGVVEACHSLGVMHRDLKPENFLF+++ E++ LKTIDFGLS
Sbjct: 240 IIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLS 299
Query: 280 MFFRPGLTF 288
MFF+P F
Sbjct: 300 MFFKPDDVF 308
|
|
| TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 715 (256.8 bits), Expect = 8.1e-142, Sum P(3) = 8.1e-142
Identities = 136/189 (71%), Positives = 155/189 (82%)
Query: 100 KKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACK 159
+KP H++R+SSAGL+ SVL RKT N KE YSLGRKLGQGQFGTTFLC+EK T E+ACK
Sbjct: 156 QKPKHMRRVSSAGLRTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACK 215
Query: 160 SIAKRKLXXXXXXXXXXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDR 219
SI+KRKL MHHLAGHPNVI I GAYED VAVH+VMELC+GGELFDR
Sbjct: 216 SISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDR 275
Query: 220 IIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
IIQRGHYTERKAA+L R IVGV+EACHSLGVMHRDLKPENFLF++++E++ LKTIDFGLS
Sbjct: 276 IIQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLS 335
Query: 280 MFFRPGLTF 288
MFF+P F
Sbjct: 336 MFFKPDEVF 344
|
|
| TAIR|locus:2827528 CPK6 "calcium dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 113/172 (65%), Positives = 137/172 (79%)
Query: 118 VLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXX 177
VLG KT N++++Y+L RKLGQGQFGTT+LC + AT ++ACKSI+KRKL
Sbjct: 73 VLGHKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRR 132
Query: 178 XXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237
MHHLAGH N++ I GAYED + VH+VMELCAGGELFDRII RGHY+ERKAA+LT+I
Sbjct: 133 EIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKI 192
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
IVGVVEACHSLGVMHRDLKPENFL +N+ ++ LK IDFGLS+FF+PG F+
Sbjct: 193 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFK 244
|
|
| TAIR|locus:2122063 CPK5 "calmodulin-domain protein kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 610 (219.8 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 113/171 (66%), Positives = 138/171 (80%)
Query: 118 VLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXX 177
VLG KT N++++Y+L RKLGQGQFGTT+LC E A+ ++ACKSI+KRKL
Sbjct: 85 VLGHKTPNIRDIYTLSRKLGQGQFGTTYLCTEIASGVDYACKSISKRKLISKEDVEDVRR 144
Query: 178 XXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237
MHHLAGH +++ I GAYED++ VH+VMELCAGGELFDRIIQRGHY+ERKAA+LT+I
Sbjct: 145 EIQIMHHLAGHGSIVTIKGAYEDSLYVHIVMELCAGGELFDRIIQRGHYSERKAAELTKI 204
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
IVGVVEACHSLGVMHRDLKPENFL +N+ ++ LK IDFGLS+FF+PG F
Sbjct: 205 IVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIF 255
|
|
| TAIR|locus:2014691 CDPK2 "AT1G35670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 1.1e-110, Sum P(2) = 1.1e-110
Identities = 109/153 (71%), Positives = 132/153 (86%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
RVIAE LSEEEI GLKE+FKMIDTDNSG IT EELK GL+RVG+ LM+SEI LM A DI
Sbjct: 318 RVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADI 377
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ 453
DNSGT+DYGEF+AA LH+NK++RE+++ AAFSYFDKDGSGYIT DELQ+AC +FGL DT
Sbjct: 378 DNSGTIDYGEFLAATLHMNKMEREENLVAAFSYFDKDGSGYITIDELQSACTEFGLCDTP 437
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQDS-GLGK 485
L+D+I+E+D DNDG+ID+SEF AMM+ G+G+
Sbjct: 438 LDDMIKEIDLDNDGKIDFSEFTAMMRKGDGVGR 470
|
|
| TAIR|locus:2136917 CPK4 "calcium-dependent protein kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 564 (203.6 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 108/153 (70%), Positives = 130/153 (84%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
RVIAE LSEEEI GLKE+FKMIDTDNSG IT EELK GL+RVG+ LM+SEI LM A DI
Sbjct: 317 RVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADI 376
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ 453
DNSGT+DYGEF+AA LH+NK++RE+++ AFSYFDKDGSGYIT DELQ AC +FGL DT
Sbjct: 377 DNSGTIDYGEFLAATLHINKMEREENLVVAFSYFDKDGSGYITIDELQQACTEFGLCDTP 436
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQDS-GLGK 485
L+D+I+E+D DNDG+ID+SEF AMM+ G+G+
Sbjct: 437 LDDMIKEIDLDNDGKIDFSEFTAMMKKGDGVGR 469
|
|
| TAIR|locus:2171726 CDPK9 "calmodulin-like domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 104/171 (60%), Positives = 125/171 (73%)
Query: 118 VLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXXXXX 177
VL KT N+++ Y LG+ LGQGQFGTTFLC K T ++ ACKSI KRKL
Sbjct: 10 VLPYKTKNVEDNYFLGQVLGQGQFGTTFLCTHKQTGQKLACKSIPKRKLLCQEDYDDVLR 69
Query: 178 XXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237
MHHL+ +PNV++I AYED VH+VMELC GGELFDRI++RGHY+ER+AA L +
Sbjct: 70 EIQIMHHLSEYPNVVRIESAYEDTKNVHLVMELCEGGELFDRIVKRGHYSEREAAKLIKT 129
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
IVGVVEACHSLGV+HRDLKPENFLF + E+A LK+ DFGLS+F PG F
Sbjct: 130 IVGVVEACHSLGVVHRDLKPENFLFSSSDEDASLKSTDFGLSVFCTPGEAF 180
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 558 (201.5 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 102/175 (58%), Positives = 129/175 (73%)
Query: 115 VGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX 174
+G VLGR ++K YSLG++LG+GQFG T LC +KAT +FACK+IAKRKL
Sbjct: 58 IGPVLGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIED 117
Query: 175 XXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
MHHL G PN++++ GAYED +VH+VMELCAGGELFDRII +GHY+ER AA L
Sbjct: 118 VRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASL 177
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
R IV +V CHS+GV+HRDLKPENFL +N+ E +PLK DFGLS+F++PG F+
Sbjct: 178 LRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFK 232
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 549 (198.3 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 99/175 (56%), Positives = 129/175 (73%)
Query: 115 VGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLXXXXXXXX 174
+G VLGR ++K Y+LG++LG+GQFG T LC +KAT +FACK+IAKRKL
Sbjct: 53 IGPVLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIED 112
Query: 175 XXXXXXXMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
MHHL G PN++++ GAYED +VH+VMELCAGGELFDRII +GHY+ER AA L
Sbjct: 113 VRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASL 172
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
R IV ++ CHS+GV+HRDLKPENFL +++ E +PLK DFGLS+F++PG F+
Sbjct: 173 LRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFK 227
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.946 |
| 3rd Layer | 2.7.11 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 489 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-50 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 6e-46 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 4e-34 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 7e-31 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 5e-29 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 7e-29 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 8e-28 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-27 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 6e-27 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-25 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-24 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 1e-23 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 1e-23 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-23 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 2e-22 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-20 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-20 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 6e-20 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 9e-20 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 1e-19 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-19 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 7e-19 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 8e-19 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 2e-18 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 3e-18 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 8e-18 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 1e-17 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-17 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 2e-17 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 3e-17 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 6e-17 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 1e-16 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-16 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-16 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 3e-16 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 7e-16 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 9e-16 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 1e-15 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 1e-15 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 1e-15 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-15 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-15 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 2e-15 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 2e-15 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 3e-15 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 3e-15 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 3e-15 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 8e-15 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 9e-15 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-14 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 3e-14 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-14 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 4e-14 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 6e-14 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 7e-14 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 8e-14 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 1e-13 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 1e-13 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 1e-13 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 2e-13 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-13 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 5e-13 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 5e-13 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 6e-13 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 7e-13 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 7e-13 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 8e-13 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 9e-13 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-12 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-12 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-12 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 1e-12 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-12 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-12 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 2e-12 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 2e-12 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 2e-12 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 3e-12 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 3e-12 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 4e-12 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 4e-12 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 4e-12 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 6e-12 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 6e-12 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 7e-12 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-11 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-11 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 2e-11 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 2e-11 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-11 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 3e-11 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 3e-11 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 3e-11 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 3e-11 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 4e-11 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 4e-11 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 4e-11 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 5e-11 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 5e-11 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 5e-11 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 5e-11 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 6e-11 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 6e-11 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 6e-11 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 8e-11 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 9e-11 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 1e-10 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-10 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-10 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-10 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-10 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-10 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 1e-10 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 1e-10 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 1e-10 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-10 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 2e-10 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-10 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-10 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 2e-10 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 2e-10 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 3e-10 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 4e-10 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 4e-10 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 4e-10 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 4e-10 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 5e-10 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 5e-10 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-10 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 6e-10 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 6e-10 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 8e-10 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 1e-09 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 1e-09 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-09 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 2e-09 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 2e-09 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 2e-09 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 2e-09 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 2e-09 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 2e-09 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-09 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 2e-09 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 2e-09 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-09 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 3e-09 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 3e-09 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 4e-09 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 4e-09 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 5e-09 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 5e-09 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 6e-09 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 7e-09 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 7e-09 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-08 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-08 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 2e-08 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-08 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 2e-08 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 2e-08 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 3e-08 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 4e-08 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 5e-08 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-08 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 5e-08 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 6e-08 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 6e-08 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 7e-08 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 7e-08 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 1e-07 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 1e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 1e-07 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 1e-07 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 1e-07 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-07 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 2e-07 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-07 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-07 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 3e-07 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-07 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 3e-07 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 3e-07 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 3e-07 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 4e-07 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 5e-07 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 6e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 6e-07 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 7e-07 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 7e-07 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 7e-07 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 7e-07 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 7e-07 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 8e-07 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 8e-07 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 8e-07 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 8e-07 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 1e-06 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 1e-06 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-06 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-06 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 1e-06 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 1e-06 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-06 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 2e-06 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-06 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 2e-06 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 2e-06 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 3e-06 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 3e-06 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 3e-06 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 4e-06 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 4e-06 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 5e-06 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 5e-06 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 6e-06 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 7e-06 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 7e-06 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 7e-06 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 7e-06 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 1e-05 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 1e-05 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-05 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 1e-05 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-05 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 2e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 2e-05 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 2e-05 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 2e-05 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-05 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-05 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 3e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 3e-05 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 3e-05 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 4e-05 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 4e-05 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 4e-05 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 4e-05 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 5e-05 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 5e-05 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 6e-05 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 6e-05 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 6e-05 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 7e-05 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 7e-05 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 8e-05 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 9e-05 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 9e-05 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 1e-04 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 1e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 1e-04 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-04 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-04 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 2e-04 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-04 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 3e-04 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 3e-04 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 3e-04 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 4e-04 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 4e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 4e-04 | |
| pfam07223 | 357 | pfam07223, DUF1421, Protein of unknown function (D | 5e-04 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 7e-04 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 7e-04 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 8e-04 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 9e-04 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 0.001 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 0.001 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 0.001 | |
| pfam06293 | 206 | pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/Waa | 0.001 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.001 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 0.001 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 0.002 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 0.002 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 0.002 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 0.002 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 0.002 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 0.002 | |
| PRK12373 | 400 | PRK12373, PRK12373, NADH dehydrogenase subunit E; | 0.002 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.003 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 0.003 | |
| PRK14971 | 614 | PRK14971, PRK14971, DNA polymerase III subunits ga | 0.003 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 0.003 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.003 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 0.004 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 0.004 | |
| PRK03427 | 333 | PRK03427, PRK03427, cell division protein ZipA; Pr | 0.004 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 1e-50
Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + KLG+G FG +L +K T K A K I K+K+ ++D E + REI+I+ L HP
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKI--KKDRERILREIKILKKL-KHP 57
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ +ED +++VME C GG+LFD + +RG +E +A R I+ +E HS G
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLKPEN L E+ +K DFGL+ PG
Sbjct: 118 IVHRDLKPENILL---DEDGHVKLADFGLARQLDPG 150
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 6e-46
Identities = 62/150 (41%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y L RKLG G FGT + K T K A K + KR +++D RREIRI+ L HP
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTA-RREIRILRRL-SHP 58
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++++ A+ED +++VME C GG+LFD + + G +E +A + I+ +E HS G
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKPEN L +++ +K DFGL+
Sbjct: 119 IIHRDLKPENIL-LDENGV--VKIADFGLA 145
|
Length = 260 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 4e-34
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FGT +L +K T K+ A K I +K + +E++ REI I+ L HPN++++
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKII--KKEDSSSLLEELLREIEILKKLN-HPNIVKLY 57
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
G +ED +++VME C GG L D + + G +E + + I+ +E HS G++HRD
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117
Query: 255 LKPENFLFINQQEEAPLKTIDFGLS 279
LKPEN L + + +K DFGLS
Sbjct: 118 LKPENILLDSDNGK--VKLADFGLS 140
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 7e-31
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ G+ +G+G F T L EK T KE+A K + KR+L E+ V+ V+ E ++ L GHP
Sbjct: 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+I++ ++D ++ V+E GEL I + G E+ I+ +E HS G
Sbjct: 63 GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
++HRDLKPEN L ++ +K DFG +
Sbjct: 123 IIHRDLKPENILL---DKDMHIKITDFGTAKVL 152
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 5e-29
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 12/148 (8%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L +K T K +A K + K+K+ ++VE E I+ + HP ++++
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLH 59
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHSLGVM 251
A++ +++V+E GGELF + + G ++E + R IV +E HSLG++
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSE----ERARFYAAEIVLALEYLHSLGII 115
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLS 279
+RDLKPEN L + +K DFGL+
Sbjct: 116 YRDLKPENILL---DADGHIKLTDFGLA 140
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 7e-29
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAMLH-LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FD+DG+G+I+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+I+Y EFV MM
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKMM 146
|
Length = 149 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 8e-28
Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+I LKE F++ D D+ G I EL K L+ +G N ++EI+ L + D N T+
Sbjct: 14 LTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGN-ETV 72
Query: 400 DYGEFIAAMLHLNK--IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
D+ EF+ M K + E+ AF FDKD GYI+ EL+ + G L D ++E
Sbjct: 73 DFPEFLTVMSVKLKRGDKEEELRE-AFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVE 131
Query: 456 DIIREVDQDNDGRIDYSEFVAMMQDS 481
+++E D+D DG IDY EF +++DS
Sbjct: 132 KLLKEYDEDGDGEIDYEEFKKLIKDS 157
|
Length = 160 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 6e-27
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
++ G LG+G FG+ +L ++K T + A KS+ +EE++E + REIRI+ L HP
Sbjct: 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQ-HP 59
Query: 190 NVIQIVGAYEDAVAVH--VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+++ G+ D + +E +GG L + + G E TR I+ + HS
Sbjct: 60 NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G++HRD+K N L + +K DFG +
Sbjct: 120 NGIVHRDIKGANILVDSDGV---VKLADFGCA 148
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 6e-27
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + RKLG+G FG +L ++ K A K +AK+ + ++VE REI+I+ L P
Sbjct: 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVVEACH 246
N++++ ++D ++++VME GG L D + + G +E +A + I+ +E H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLH 295
S G++HRD+KPEN L ++ +K IDFGL+ + L
Sbjct: 119 SKGIIHRDIKPENILL--DRDGRVVKLIDFGLAKLLPDPGSTSSIPALP 165
|
Length = 384 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 3e-25
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
++ + K+G+G FG + K T KE A K I KL ++E E + EI+I+ H
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVI---KLESKEKKEKIINEIQILKKCK-H 56
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHS 247
PN+++ G+Y + +VME C+GG L D + TE + A + + ++ +E HS
Sbjct: 57 PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS 116
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G++HRD+K N L + + +K IDFGLS
Sbjct: 117 NGIIHRDIKAANIL-LT--SDGEVKLIDFGLS 145
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + +++G+G FG +L K+ K + K I ++ E++ ED E++I+ L HP
Sbjct: 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLN-HP 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEAC 245
N+I+ ++E+ + +VME GG+L +I ++ + E + D + ++
Sbjct: 60 NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL 119
Query: 246 HSLGVMHRDLKPEN-FLFINQQEEAPLKTIDFGLS 279
HS ++HRD+KP+N FL N +K DFG+S
Sbjct: 120 HSRKILHRDIKPQNIFLTSNGL----VKLGDFGIS 150
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-23
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED-VRREIRIMHHLAGH 188
Y + ++G+G G F ++ T + A K +A R+L E + + REI+ + H
Sbjct: 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQAC-QH 58
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHS 247
P V++++ + +VME L + + E + R+++ V H+
Sbjct: 59 PYVVKLLDVFPHGSGFVLVMEYMPSD-LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA 117
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
G+MHRDLKP N L I+ LK DFGL+ F
Sbjct: 118 NGIMHRDLKPAN-LLISADGV--LKIADFGLARLFSEE 152
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 1e-23
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
L+E++ ++E F + DTD SG I +ELK ++ +G EI ++ D D SG
Sbjct: 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGK 69
Query: 399 MDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455
+D+ EF+ M L + + + AF FD D +G I+ L+ ++ G + D +L+
Sbjct: 70 IDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQ 129
Query: 456 DIIREVDQDNDGRIDYSEFVAMMQDSGL 483
++I E D++ DG I EF +M+ + L
Sbjct: 130 EMIDEADRNGDGEISEEEFYRIMKKTNL 157
|
Length = 158 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 2e-23
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + LG G FG L K + K +A K ++K K+ + VE V E RI+ + HP
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP 61
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + G+++D +++VME GGELF + + G + E A +V +E HSL
Sbjct: 62 FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD 121
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFG 277
+++RDLKPEN L ++ +K DFG
Sbjct: 122 IVYRDLKPENLL-LDSD--GYIKITDFG 146
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 96.1 bits (240), Expect = 2e-22
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG G FG L K+ + FA K + KR + E + E I+ HP ++++
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLY 59
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++D ++++ME C GGEL+ + RG + E A +V E H+ G+++RDL
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119
Query: 256 KPENFLFINQQEEAPLKTIDFG 277
KPEN L ++ +K +DFG
Sbjct: 120 KPENLL-LDSN--GYVKLVDFG 138
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 90.7 bits (226), Expect = 1e-20
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 131 SLGRKLGQGQFGTTFLCV----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+LG+KLG+G FG + + E A K++ ++ +E+ +E+ RE RIM L
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTL--KEDASEQQIEEFLREARIMRKL- 58
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC- 245
HPNV++++G + +++VME GG+L + + +DL + +
Sbjct: 59 DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKL--SLSDLLSFALQIARGME 116
Query: 246 --HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRDL N L + + K DFGLS
Sbjct: 117 YLESKNFIHRDLAARNCL-VGENLVV--KISDFGLS 149
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 89.5 bits (223), Expect = 4e-20
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 131 SLGRKLGQGQFGTTFLCV----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+LG+KLG+G FG + + E A K++ ++ +E+ +E+ RE RIM L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTL--KEDASEQQIEEFLREARIMRKL- 58
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC- 245
HPN+++++G + + +VME GG+L D + + E +DL + +
Sbjct: 59 DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP-KELSLSDLLSFALQIARGME 117
Query: 246 --HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRDL N L + + K DFGLS
Sbjct: 118 YLESKNFIHRDLAARNCL-VGENLVV--KISDFGLS 150
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 6e-20
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+ +G +G FL +K+T +A K I K + + V+ V E I+ A P V+++
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQ-AQSPYVVKLY 59
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ +++VME GG+L + G E A IV +E HS G++HRDL
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119
Query: 256 KPENFLFINQQEEAPLKTIDFGLSMF 281
KP+N L I+ LK DFGLS
Sbjct: 120 KPDNIL-IDS--NGHLKLTDFGLSKV 142
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 9e-20
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED-VRREIRIMHHLAGHPNVIQ 193
LGQG G + K T K +A K I + +E+ + RE++ + P V++
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKI---HVDGDEEFRKQLLRELKTLRS-CESPYVVK 63
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMH 252
GA+ + +V+E GG L D + + G E A + R I+ ++ H+ ++H
Sbjct: 64 CYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIH 123
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLS 279
RD+KP N L IN + E K DFG+S
Sbjct: 124 RDIKPSNLL-INSKGEV--KIADFGIS 147
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 1e-19
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ L R +G+G FG + ++ T+K FA K + K+K + V +V E RI+ L HP
Sbjct: 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HP 60
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ + +++D +++V++L GG+L + Q+ ++E + IV +E HS G
Sbjct: 61 FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRD+KP+N L E+ + DF ++ P
Sbjct: 121 IIHRDIKPDNILL---DEQGHVHITDFNIATKVTPD 153
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 3e-19
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y LG +G+G FG + + T A K I+ K+ EE ++ + +EI ++ +L HP
Sbjct: 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLK-HP 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ +G+ E + ++++++E G L I + G + E A ++ + H G
Sbjct: 60 NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+HRD+K N L ++ +K DFG++
Sbjct: 120 VIHRDIKAANILT---TKDGVVKLADFGVA 146
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 7e-19
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E Y L +++G G +G + + AT + A K I KL +D E +++EI ++
Sbjct: 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKE-C 57
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEA 244
HPN++ G+Y + +VME C GG L D I Q RG +E + A + R + +
Sbjct: 58 RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQD-IYQVTRGPLSELQIAYVCRETLKGLAY 116
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H G +HRD+K N L + +K DFG+S
Sbjct: 117 LHETGKIHRDIKGANILLTEDGD---VKLADFGVS 148
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 79.9 bits (198), Expect = 8e-19
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVDQDNDGRIDYSEFVAMMQ 479
AF FDKDG G I+ DEL+ A + G ++ ++++IREVD+D DG+ID+ EF+ +M
Sbjct: 4 EAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 2e-18
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G G FG L ++ ++ +A K +A ++ + + V E R++ ++ HP +I++
Sbjct: 9 VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLF 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
D ++++ME GGELF + G ++ IV +E HS +++RDL
Sbjct: 68 WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDL 127
Query: 256 KPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
KPEN L +E +K DFG F L R W
Sbjct: 128 KPENILL---DKEGHIKLTDFG----FAKKLRDRTW 156
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 3e-18
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+ + + + +G+G FG +L +K T + +A K + K + + VR E I+ A
Sbjct: 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD-AD 59
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P ++++ +++D +++VME GG+L + +I++ + E A +V +++ H
Sbjct: 60 SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHK 119
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
LG +HRD+KP+N L + +K DFGL
Sbjct: 120 LGFIHRDIKPDNILI---DADGHIKLADFGLCKKMN 152
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 8e-18
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + ++LG G FG+ +L K T + A K + K+K + E+ ++R E++ + L HP
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLR-EVKSLRKLNEHP 58
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHS 247
N++++ + + ++ V E G L+ + R ++E + I+ + H
Sbjct: 59 NIVKLKEVFRENDELYFVFE-YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK 117
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G HRDLKPEN L ++ E +K DFGL+
Sbjct: 118 HGFFHRDLKPENLL-VSGPEV--VKIADFGLA 146
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 1e-17
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKE----FACKSIAK-RKLTTEEDVEDVRREIRIMHH 184
+ L R LG G +G FL V K + +A K + K + + E R E +++
Sbjct: 2 FELLRVLGTGAYGKVFL-VRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
+ P ++ + A++ +H++++ GGELF + QR H+TE + IV ++
Sbjct: 61 VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDH 120
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
H LG+++RD+K EN L E + DFGLS F R
Sbjct: 121 LHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLAEEEER 162
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 1e-17
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHLAGHPNV 191
K+G+G +G + +K T + A K I KL E + REI+++ L HPN+
Sbjct: 5 GKIGEGTYGVVYKARDKLTGEIVAIKKI---KLRFESEGIPKTALREIKLLKELN-HPNI 60
Query: 192 IQIVGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
I+++ + +++V E +L ++ E ++ + CHS G
Sbjct: 61 IKLLDVFRHKGDLYLVFEFMDTDLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFCHSHG 118
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++HRDLKPEN L IN + LK DFGL+ F
Sbjct: 119 ILHRDLKPENLL-INTEGV--LKLADFGLARSFGS 150
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 2e-17
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED-----VRREIRIMHH 184
Y G+KLG+G + + +K T + A K I KL ++ +D REI+++
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKI---KLGERKEAKDGINFTALREIKLLQE 58
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAG---GELFDRII--QRGHYTERKAADLTRIIV 239
L HPN+I ++ + +++V E + D+ I K+ + +
Sbjct: 59 LK-HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADI---KS--YMLMTL 112
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+E HS ++HRDLKP N L I LK DFGL+ F
Sbjct: 113 RGLEYLHSNWILHRDLKPNN-LLIASDGV--LKLADFGLARSF 152
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 3e-17
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
L+E F++ D D G I+ +ELK L+ +G L + EID +++ D D G +D+ EF+
Sbjct: 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLEL 61
Query: 408 M 408
M
Sbjct: 62 M 62
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 6e-17
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 134 RKLGQGQFGTTFLCV---EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
+KLG+G FG + + E A K++ ++ +EE+ +D +E R+M L GHPN
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTL--KEDASEEERKDFLKEARVMKKL-GHPN 57
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK------AADLTRIIVGVVEA 244
V++++G + +++V+E GG+L D + + DL + + A
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI--A 115
Query: 245 C-----HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRDL N L +K DFGLS
Sbjct: 116 KGMEYLASKKFVHRDLAARNCLVGEDLV---VKISDFGLS 152
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL-TTEEDVEDVRREIRIMHHLA 186
E+++L +G+G FG + ++K T + A K I L E+++ED+++EI+ +
Sbjct: 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVI---DLEEAEDEIEDIQQEIQFLSQCR 57
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P + + G++ + ++ME C GG D +++ G E A + R ++ +E H
Sbjct: 58 S-PYITKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLH 115
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G +HRD+K N L EE +K DFG+S
Sbjct: 116 EEGKIHRDIKAANILL---SEEGDVKLADFGVS 145
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
G+ +E+Y K+G+G G + ++AT KE A K + +L +++ E + EI IM
Sbjct: 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKM---RLR-KQNKELIINEILIMK 70
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY-TERKAADLTRIIVGVV 242
HPN++ +Y + VVME GG L D I Q E + A + R ++ +
Sbjct: 71 DCK-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGL 129
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
E HS V+HRD+K +N L +++ +K DFG +
Sbjct: 130 EYLHSQNVIHRDIKSDNIL-LSKDGS--VKLADFGFA 163
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 2e-16
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+ + +G FG+ +L +++T FA K + K + + V +V+ E IM P V +
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++ +++VME GG+ I G E A +V VE H G++HR
Sbjct: 62 LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
D+KPEN L + LK DFGLS
Sbjct: 122 DIKPENLLI---DQTGHLKLTDFGLS 144
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 3e-16
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE--EDVEDVRREIRIMHHLAG 187
+ G+ LGQG FG +LC + T +E A K + + E ++V + EI+++ +L
Sbjct: 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ- 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H ++Q G D + + ME GG + D++ G TE TR I+ VE HS
Sbjct: 63 HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHS 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+K N L + +K DFG S
Sbjct: 123 NMIVHRDIKGANIL---RDSAGNVKLGDFGAS 151
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 7e-16
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKA----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
LG+KLG+G FG + K T+ + A K++ ++ +EE+ E+ E IM L
Sbjct: 3 LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTL--KEGASEEEREEFLEEASIMKKL-S 59
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC-- 245
HPN+++++G +++V E GG+L D + + G + DL ++ + + +
Sbjct: 60 HPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGE--KLTLKDLLQMALQIAKGMEY 117
Query: 246 -HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRDL N L + + K DFGLS
Sbjct: 118 LESKNFVHRDLAARNCL-VTENLVV--KISDFGLS 149
|
Length = 258 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 9e-16
Identities = 45/152 (29%), Positives = 87/152 (57%), Gaps = 7/152 (4%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y +K+G+G FG L K K++ K I K++ +E E+ R+E+ ++ ++ HP
Sbjct: 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER-EESRKEVAVLSNMK-HP 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRG-HYTERKAADLTRIIVGVVEACHS 247
N++Q ++E+ +++VM+ C GG+L+ +I QRG + E + D I ++ H
Sbjct: 60 NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+K +N +F+ + + +K DFG++
Sbjct: 120 RKILHRDIKSQN-IFLTK--DGTIKLGDFGIA 148
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 1e-15
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
++GQG +G FL +K T + A K + K L +V V E I+ ++++
Sbjct: 8 QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSEWLVKL 66
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+ A++D +++ ME GG+ + G +E A + V+A H LG +HRD
Sbjct: 67 LYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126
Query: 255 LKPENFLFINQQEEAPLKTIDFGLS 279
LKPENFL +K DFGLS
Sbjct: 127 LKPENFLI---DASGHIKLTDFGLS 148
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+ LG+G G FL K T K FA K + K+++ V+ V E I+ L HP +
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPT 65
Query: 194 IVGAYEDAVAVHVVMELCAGGELFD-RIIQRGHYTERKAAD--LTRIIVGVVEACHSLGV 250
+ +++ + +VM+ C GGELF Q G + A +++ +E H LG+
Sbjct: 66 LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLA-LEYLHLLGI 124
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++RDLKPEN L E + DF LS
Sbjct: 125 VYRDLKPENILL---HESGHIMLSDFDLS 150
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 1e-15
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ +G LG G FG + K T + +A K + KR++ + V+ V +E I+ L+ HP
Sbjct: 20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HP 78
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++ ++ +++D V+ ++E GGELF + + G + A +V E HS
Sbjct: 79 FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD 138
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+++RDLKPEN L N+ +K DFG +
Sbjct: 139 IIYRDLKPENLLLDNK---GHVKVTDFGFA 165
|
Length = 329 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 1e-15
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED---VEDVRREIRIMHHLA 186
Y KLG+G +G + +K T + A K I +L EE+ +R EI ++ L
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI---RLDNEEEGIPSTALR-EISLLKELK 56
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFD--RII--QRGHYTERKAADLTRIIVGVV 242
HPN+++++ +++V E C D + + + G + + ++ +
Sbjct: 57 -HPNIVKLLDVIHTERKLYLVFEYCD----MDLKKYLDKRPGPLSPNLIKSIMYQLLRGL 111
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
CHS ++HRDLKP+N + IN + LK DFGL+ F
Sbjct: 112 AYCHSHRILHRDLKPQN-ILIN--RDGVLKLADFGLARAFGI 150
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 2e-15
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 12/154 (7%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E++ + KLG+G +G+ + + K T + A K + EED++++ +EI I+
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVV-----PVEEDLQEIIKEISILKQ-CD 56
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFD--RIIQRGHYTERKAADLTRIIVGVVEAC 245
P +++ G+Y + +VME C G + D +I + TE + A + + +E
Sbjct: 57 SPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK-TLTEEEIAAILYQTLKGLEYL 115
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS +HRD+K N L +N EE K DFG+S
Sbjct: 116 HSNKKIHRDIKAGNIL-LN--EEGQAKLADFGVS 146
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 2e-15
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E + + +G+G FG L +K T K +A K++ K ++ ++ + V+ E ++ +
Sbjct: 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SD 59
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVE 243
P V+ + +++DA ++++ME GG+L +I+ ++E D+TR V +E
Sbjct: 60 SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSE----DVTRFYMAECVLAIE 115
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
A H LG +HRD+KP+N L +K DFGLS F
Sbjct: 116 AVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGF 151
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 62 PAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKK------PAHVKRISSAGLQV 115
P P P+ ST K R+P +P Q++ S P SS+
Sbjct: 3 PIQPPPGVPLPSTARHTTKSRPRRRPDLTLPLPQRDPSLAVPLPLPPPSSSSSSSSSSSA 62
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE-D 174
+L E+ ++G G GT + + + T + +A K I E+ V
Sbjct: 63 SGSAPSAAKSLSEL-ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQ 118
Query: 175 VRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
+ REI I+ HPNV++ ++ + V++E GG L I E+ AD+
Sbjct: 119 ICREIEILRD-VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD----EQFLADV 173
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
R I+ + H ++HRD+KP N L IN + +K DFG+S
Sbjct: 174 ARQILSGIAYLHRRHIVHRDIKPSNLL-INSAKN--VKIADFGVS 215
|
Length = 353 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 26/161 (16%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
+G+G FGT K+ K K I +T +E + V E+ I+ L HPN I
Sbjct: 7 TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLV-SEVNILRELK-HPN---I 61
Query: 195 VGAYE-----DAVAVHVVMELCAGGELFDRIIQRGHYTERKAAD---LTRIIVGVVEA-- 244
V Y+ +++VME C GG+L ++IQ+ ERK + + RI+ ++ A
Sbjct: 62 VRYYDRIIDRSNQTLYIVMEYCEGGDL-AQLIQKC-KKERKYIEEEFIWRILTQLLLALY 119
Query: 245 -CHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
CH+ V+HRDLKP N +F++ L DFGL+
Sbjct: 120 ECHNRSDPGNTVLHRDLKPAN-IFLDANNNVKLG--DFGLA 157
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 3e-15
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 35/167 (20%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR---REIRIMHHLA 186
Y L + +G G +G V+K T ++ A K I+ +D+ D + REI+++ HL
Sbjct: 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISN----VFDDLIDAKRILREIKLLRHLR 57
Query: 187 GHPNVIQIV-----GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT------ 235
H N+I ++ + ED V++V EL +L ++I+ LT
Sbjct: 58 -HENIIGLLDILRPPSPEDFNDVYIVTEL-METDL-HKVIKSPQ-------PLTDDHIQY 107
Query: 236 ---RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+I+ G+ + HS V+HRDLKP N + +N + LK DFGL+
Sbjct: 108 FLYQILRGL-KYLHSANVIHRDLKPSN-ILVNSNCD--LKICDFGLA 150
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 3e-15
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E Y + + +G+G FG L K++QK +A K ++K ++ D E IM A
Sbjct: 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 101
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P V+Q+ A++D +++VME GG+L + ++ E+ A T +V ++A HS
Sbjct: 102 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHS 160
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+G++HRD+KP+N L + LK DFG M
Sbjct: 161 MGLIHRDVKPDNMLL---DKHGHLKLADFGTCM 190
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 8e-15
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y R +G+G FG LC KA QK K I ++T +E + E +++ L+ HP
Sbjct: 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDER-LAAQNECQVLKLLS-HP 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHS 247
N+I+ + + A+ +VME GG L + I +R + E I+ + H+
Sbjct: 60 NIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT 119
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLK +N L + + +K DFG+S
Sbjct: 120 KLILHRDLKTQNILL--DKHKMVVKIGDFGIS 149
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 9e-15
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L +K T +A K + K ++ +E V VR E I+ A +P V+++
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVKLY 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG----VVEACHSLGVM 251
+++D ++++ME GG++ ++++ +TE + TR + +++ H LG +
Sbjct: 68 YSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTE----EETRFYIAETILAIDSIHKLGYI 123
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
HRD+KP+N L + +K DFGL
Sbjct: 124 HRDIKPDNLLL---DAKGHIKLSDFGLCTGL 151
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 2e-14
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L EKAT K +A K + K + +++V E R++ + HP + +
Sbjct: 3 LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALK 61
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ + VME GGELF + + ++E +A IV + HS V++RDL
Sbjct: 62 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 122 KLENLML---DKDGHIKITDFGL 141
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+LG G G + + T K A K+I R E + + RE+ I+H P ++
Sbjct: 7 GELGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHK-CNSPYIVG 63
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEAC----HS 247
GA+ + + + ME GG L D+I++ G ER L +I V V++
Sbjct: 64 FYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERI---LGKIAVAVLKGLTYLHEK 119
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+KP N L +N + + +K DFG+S
Sbjct: 120 HKIIHRDVKPSNIL-VNSRGQ--IKLCDFGVS 148
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 3e-14
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + K+G+G F + T K +A K + K + E+ REI+ + L+ HP
Sbjct: 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNN--LREIQALRRLSPHP 58
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHY-TERKAADLTRIIVGVVEACH 246
N+++++ D + +V EL L++ I R E++ ++ ++ H
Sbjct: 59 NILRLIEVLFDRKTGRLALVFEL-MDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH 117
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
G+ HRD+KPEN L I LK DFG
Sbjct: 118 RNGIFHRDIKPENIL-IKDDI---LKLADFG 144
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 4e-14
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKAT----QKEFACKSIAKRKLTTEED-VEDVRREIRIMHH 184
+ L + LG G +G FL V K T K +A K + K L + VE R E ++ H
Sbjct: 2 FELLKVLGTGAYGKVFL-VRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV-- 242
+ P ++ + A++ +H++++ +GGE+F + QR +++E D R G +
Sbjct: 61 VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSE----DEVRFYSGEIIL 116
Query: 243 --EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
E H LG+++RD+K EN L E + DFGLS F
Sbjct: 117 ALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEF 155
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 6e-14
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L K++++ +A K ++K ++ D E IM H A ++Q+
Sbjct: 51 IGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-ANSEWIVQLH 109
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHY--TERKAADLTRIIVGVVEACHSLGVMHR 253
A++D +++VME GG+L + + +Y E+ A T +V ++A HS+G +HR
Sbjct: 110 YAFQDDKYLYMVMEYMPGGDLVNLM---SNYDIPEKWARFYTAEVVLALDAIHSMGFIHR 166
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSM 280
D+KP+N L + LK DFG M
Sbjct: 167 DVKPDNMLL---DKSGHLKLADFGTCM 190
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 71.9 bits (176), Expect = 7e-14
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
G+ K+ Y+ K+GQG GT + ++ AT +E A K + L + E + EI +M
Sbjct: 15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQM---NLQQQPKKELIINEILVMR 71
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN++ + +Y + VVME AGG L D ++ E + A + R + +E
Sbjct: 72 ENK-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 129
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
HS V+HRD+K +N L + +K DFG P
Sbjct: 130 FLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 167
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 8e-14
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG + EKAT +A K + K L +E V E I+ ++ P + Q+
Sbjct: 9 VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL-SISNSPWIPQLQ 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHSLGVM 251
A++D +++VME GG+L ++ R Y ++ D+ + +V + + H +G +
Sbjct: 68 YAFQDKDNLYLVMEYQPGGDLLS-LLNR--YEDQFDEDMAQFYLAELVLAIHSVHQMGYV 124
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFG 277
HRD+KPEN L +K DFG
Sbjct: 125 HRDIKPENVLI---DRTGHIKLADFG 147
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 1e-13
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y++ R +G+G FG L + +++A K I R + VED R+E ++ + HP
Sbjct: 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEI--RLPKSSSAVEDSRKEAVLLAKMK-HP 58
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGH-YTERKAAD-LTRIIVGVVEACH 246
N++ ++E +++VME C GG+L +I +QRG + E ++ +G V+ H
Sbjct: 59 NIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG-VQHIH 117
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
V+HRD+K +N +F+ Q +K DFG
Sbjct: 118 EKRVLHRDIKSKN-IFLTQN--GKVKLGDFG 145
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 1e-13
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKA----TQKEFACKSIAKRKLTTE-EDVEDVRREIRIMHH 184
+ L + LG G +G FL V K + K +A K + K + + + E R E +++ H
Sbjct: 2 FELLKVLGTGAYGKVFL-VRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
+ P ++ + A++ +H++++ GGELF + QR + E++ + IV +E
Sbjct: 61 IRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEH 120
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
H LG+++RD+K EN L + DFGLS F R +
Sbjct: 121 LHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHEDEVERAY 164
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 1e-13
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E Y + + +G+G FG L K+T+K +A K ++K ++ D E IM A
Sbjct: 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 101
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P V+Q+ A++D +++VME GG+L + ++ E+ A T +V ++A HS
Sbjct: 102 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 160
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+G +HRD+KP+N L + LK DFG M
Sbjct: 161 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCM 190
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 2e-13
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
Y R LG+G FG L K + +L+ E++ D EI I+ L H
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQ-H 58
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACH 246
PN+I + D + + ME GG L+D+I+++ + E IV V H
Sbjct: 59 PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH 118
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G++HRD+K N +F+ + +K DFG+S
Sbjct: 119 KAGILHRDIKTLN-IFLTK--AGLIKLGDFGIS 148
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 3e-13
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
G K+G G FG + V T + A K I + + ++++ E++++ L HPN
Sbjct: 4 RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPK-TIKEIADEMKVLELLK-HPN- 60
Query: 192 IQIVGAYEDAVAVH-----VVMELCAGGELFD-----RIIQRGHYTERKAADLTRIIVGV 241
+V Y V VH + ME C+GG L + RI+ H L
Sbjct: 61 --LVKYY--GVEVHREKVYIFMEYCSGGTLEELLEHGRILDE-HVIRVYTLQLLE----G 111
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ HS G++HRD+KP N +K DFG +
Sbjct: 112 LAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCA 146
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 5e-13
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ L +G+G +G + K T + A K + + +E+ E+++ E I+ + HP
Sbjct: 8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIM---DIIEDEE-EEIKEEYNILRKYSNHP 63
Query: 190 NVIQIVGAY------EDAVAVHVVMELCAGG---ELFDRIIQRGH-YTERKAADLTRIIV 239
N+ GA+ + + +VMELC GG +L + ++G E A + R +
Sbjct: 64 NIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETL 123
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H V+HRD+K +N L + A +K +DFG+S
Sbjct: 124 RGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDFGVS 160
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 69.0 bits (168), Expect = 5e-13
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E+++ K+G+G FG F ++ TQK A K I + E+++ED+++EI ++
Sbjct: 3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQ-C 59
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P V + G+Y + ++ME GG D +++ G E + A + R I+ ++ H
Sbjct: 60 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 118
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E +K DFG++
Sbjct: 119 SEKKIHRDIKAANVLL---SEHGEVKLADFGVA 148
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 6e-13
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + +++V E R++ + HP + +
Sbjct: 3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 61
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 62 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 122 KLENLML---DKDGHIKITDFGL 141
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 7e-13
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ--LEDIIREVD 462
+A L +I AFS FDKDG G IT EL T + G + T+ L+D+I EVD
Sbjct: 1 MADQLTEEQIAE---FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 57
Query: 463 QDNDGRIDYSEFVAMMQ 479
D +G ID+ EF+ +M
Sbjct: 58 ADGNGTIDFPEFLTLMA 74
|
Length = 149 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 7e-13
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 427 FDKDGSGYITPDELQTACQQFGLD------DTQLEDIIREVDQDNDGRIDYSEFVAMM 478
DKDG GYI +EL+ + GL + +E E+D+D DGRI + EF+ M
Sbjct: 3 LDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 8e-13
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIA--KRKLTTEEDVEDVRREIRIMHHLAG 187
+ LG+ LGQG FG +LC + T +E A K + T ++V + EI+++ +L
Sbjct: 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL- 62
Query: 188 HPNVIQIVGAYEDAV--AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H ++Q G D + + + ME GG + D++ G TE TR I+ V
Sbjct: 63 HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYL 122
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS ++HRD+K N L + +K DFG S
Sbjct: 123 HSNMIVHRDIKGANIL---RDSVGNVKLGDFGAS 153
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 70.5 bits (172), Expect = 9e-13
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + +K+G G+FG FL K TQ+ F K+I+ R L E + V E+ +M L H
Sbjct: 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLV-IEVNVMRELK-HK 72
Query: 190 NVIQIVGAYEDAV--AVHVVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVV 242
N+++ + + + ++++ME C G+L R IQ+ G E D+TR ++ +
Sbjct: 73 NIVRYIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVDITRQLLHAL 131
Query: 243 EACHSLG-------VMHRDLKPENFLF-------------INQQEEAPLKTI-DFGLS 279
CH+L V+HRDLKP+N N P+ I DFGLS
Sbjct: 132 AYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLS 189
|
Length = 1021 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 1e-12
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKE----FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
LGQG FG FL V K T + +A K + K L + V + E I+ + HP +
Sbjct: 4 LGQGSFGKVFL-VRKITGPDAGQLYAMKVLKKATLKVRDRVR-TKMERDILAEV-NHPFI 60
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
+++ A++ ++++++ GG+LF R+ + +TE + ++ HSLG++
Sbjct: 61 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 120
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLS 279
+RDLKPEN L EE +K DFGLS
Sbjct: 121 YRDLKPENILL---DEEGHIKLTDFGLS 145
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 1e-12
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 131 SLGRKL---GQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED-VEDVRREIRIMHHL- 185
SL ++L G+G +G + T + A K I L T +D V D++RE+ ++ L
Sbjct: 1 SLYQRLELIGRGAYGAVYRGKHVPTGRVVALKII---NLDTPDDDVSDIQREVALLSQLR 57
Query: 186 -AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVE 243
+ PN+ + G+Y + ++ME GG + R + + G E+ + + R ++ ++
Sbjct: 58 QSQPPNITKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALK 115
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H +GV+HRD+K N L N +K DFG++
Sbjct: 116 YIHKVGVIHRDIKAANILVTN---TGNVKLCDFGVA 148
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 1e-12
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 133 GRKLGQGQFGTTFLCVEKATQKEFACK--SIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
G LG G FG+ + + FA K S+A T +E V+ + +EI ++ L HPN
Sbjct: 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPN 63
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGV 250
++Q +G + +++ +EL GG L + + G + E TR I+ +E H
Sbjct: 64 IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS---MFFRPGLTFR 289
+HRD+K N L +K DFG++ + F +F+
Sbjct: 124 VHRDIKGANILVDTNGV---VKLADFGMAKQVVEFSFAKSFK 162
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
+G+G +G C KAT + A K K ED EDV+ RE++++ L H N
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIK-----KFKESEDDEDVKKTALREVKVLRQLR-HEN 61
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV--------GVV 242
++ + A+ +++V E L E L V +
Sbjct: 62 IVNLKEAFRRKGRLYLVFEYVERTLL--------ELLEASPGGLPPDAVRSYIWQLLQAI 113
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
CHS ++HRD+KPEN L +++ LK DFG
Sbjct: 114 AYCHSHNIIHRDIKPENIL-VSESGV--LKLCDFG 145
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 2e-12
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
E ++ R LG G FG L K A K K K+ ++ V+ V E +I++++
Sbjct: 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI- 88
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HP + + G+++D +++V+E GGE F + + + IV + E
Sbjct: 89 NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQ 148
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
SL +++RDLKPEN L ++ +K DFG +
Sbjct: 149 SLNIVYRDLKPENLLL---DKDGFIKMTDFGFA 178
|
Length = 340 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y L +G G + + ++ A K I K T V+++R+E++ M HP
Sbjct: 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCN-HP 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFD---RIIQRGHYTERKAADLTRIIVGVVEACH 246
NV++ ++ + +VM +GG L D RG E A + + ++ +E H
Sbjct: 60 NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS-MFFRPG 285
S G +HRD+K N L E+ +K DFG+S G
Sbjct: 120 SNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGG 156
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 2e-12
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
M+ + +G G FG L + T +A K++ K + V+ E I+ A +
Sbjct: 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADN 60
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
V+++ +++D ++ VM+ GG++ +I+ G + E A + +E+ H +
Sbjct: 61 EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM 120
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
G +HRD+KP+N L I++ + +K DFGL FR
Sbjct: 121 GFIHRDIKPDNIL-IDR--DGHIKLTDFGLCTGFR 152
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
M+ + LG G FG L + T +A K++ K+ + V V+ E I+ A +
Sbjct: 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADN 60
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
V+++ +++D ++ VM+ GG++ +I+ + E A + +E+ H +
Sbjct: 61 EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM 120
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLHFLFFQKQRQSVLQ 308
G +HRD+KP+N L + +K DFGL FR W + ++QK
Sbjct: 121 GFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFR-------WTH-NSKYYQK------G 163
Query: 309 TRLVRNLNEPGSLWPDKVAVPPIGDRV 335
+ + ++ EP LW D V+ GDR+
Sbjct: 164 SHIRQDSMEPSDLW-DDVSNCRCGDRL 189
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+ LG+G FG L K T + +A K + K + ++DVE E R++ HP + Q
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ ++ + VME GG+L I + G + E +A IV ++ H G+++R
Sbjct: 61 LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLK +N L E +K DFG+
Sbjct: 121 DLKLDNVLL---DSEGHIKIADFGMC 143
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 3e-12
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E+++ ++G+G FG F ++ TQ+ A K I + E+++ED+++EI ++
Sbjct: 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQ-C 59
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P V + G+Y + ++ME GG D +++ G + E + A + + I+ ++ H
Sbjct: 60 DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLH 118
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E+ +K DFG++
Sbjct: 119 SEKKIHRDIKAANVLL---SEQGDVKLADFGVA 148
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 3e-12
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 134 RKLGQGQFGTTFLCVEKATQKE----FACKSIAKRKL-TTEEDVEDVRREIRIMHHLAGH 188
+ LG+G +G F V K T + FA K + K + ++D + E I+ + H
Sbjct: 2 KVLGKGGYGKVFQ-VRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-H 59
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
P ++ ++ A++ +++++E +GGELF + + G + E A I +E H
Sbjct: 60 PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ 119
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
G+++RDLKPEN L Q +K DFGL
Sbjct: 120 GIIYRDLKPENILLDAQGH---VKLTDFGL 146
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 4e-12
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R LG+G FG L K + + +A K + K + ++DVE E RI+ HP + Q
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ ++ + VME GG+L I + + E +A I + H G+++R
Sbjct: 61 LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120
Query: 254 DLKPENFLFINQQEEAPLKTIDFGL 278
DLK +N L E K DFG+
Sbjct: 121 DLKLDNVLL---DHEGHCKLADFGM 142
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 4e-12
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
M+ + LG G FG L + T+ +A K++ K+ + V V+ E I+ A +
Sbjct: 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADN 60
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
V+++ +++D ++ VM+ GG++ +I+ G + E A + VE+ H +
Sbjct: 61 EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM 120
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
G +HRD+KP+N L + +K DFGL FR
Sbjct: 121 GFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFR 152
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 66.7 bits (162), Expect = 4e-12
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
G+ K+ Y+ K+GQG GT F ++ AT +E A K I L + E + EI +M
Sbjct: 15 GDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQI---NLQKQPKKELIINEILVMK 71
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
L +PN++ + ++ + VVME AGG L D ++ E + A + R + +E
Sbjct: 72 ELK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALE 129
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
H+ V+HRD+K +N L + +K DFG P
Sbjct: 130 FLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITP 167
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 6e-12
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH--HLAGHPNVIQ 193
LG+G FG L K T + +A K++ K + ++VE + E RI + HP ++
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ ++ V VME AGG+L I ++E +A +V ++ H +++R
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLM-MHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYR 125
Query: 254 DLKPENFLFINQQEEAPLKTIDFGL 278
DLK +N L E +K DFGL
Sbjct: 126 DLKLDNLLL---DTEGFVKIADFGL 147
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 6e-12
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
N +E + L +++G G +G + T + A K I KL ED V++EI IM
Sbjct: 6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVI---KLEPGEDFAVVQQEI-IMMK 61
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
H N++ G+Y + + ME C GG L D G +E + A ++R + +
Sbjct: 62 DCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYY 121
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS G MHRD+K N L + +K DFG+S
Sbjct: 122 LHSKGKMHRDIKGANILL---TDNGHVKLADFGVS 153
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 7e-12
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+KLG+G +G+ + + + +A K + ++ +E ED EIRI+ + HPN+I
Sbjct: 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKER-EDAVNEIRILASVN-HPNIIS 63
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTER--KAADLTRIIVGVVE---ACHSL 248
A+ D + +VME G+L + I + + ++ RI + ++ A H
Sbjct: 64 YKEAFLDGNKLCIVMEYAPFGDLS-KAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ 122
Query: 249 GVMHRDLKPEN-FLFINQQEEAPLKTIDFGLS 279
++HRDLK N L N +K D G+S
Sbjct: 123 KILHRDLKSANILLVANDL----VKIGDLGIS 150
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 1e-11
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 125 NLKEMYS-LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED--------- 174
++ E Y G LG+G +G + T K A K + +++ + +
Sbjct: 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIH 64
Query: 175 --VRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERK 230
RE++IM+ + H N++ +V Y + +++VM++ A ++ DR I+ TE +
Sbjct: 65 FTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIR---LTESQ 120
Query: 231 AADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ I+ + H MHRDL P N +FIN + K DFGL+
Sbjct: 121 VKCILLQILNGLNVLHKWYFMHRDLSPAN-IFINSKGIC--KIADFGLA 166
|
Length = 335 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 2e-11
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG C KAT K +ACK + K++L + + E + + ++ +
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNE-KKILEKVSSRFIVSLA 59
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHR 253
A+E + +VM L GG+L I G + E +A I+ +E H +++R
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
DLKPEN L + ++ D GL++ + G
Sbjct: 120 DLKPENVLL---DDHGNVRISDLGLAVELKGG 148
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 65.1 bits (158), Expect = 2e-11
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L +K T +A K + K + +E V +R E I+ A V+++
Sbjct: 9 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVKMF 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++D + ++++ME GG++ ++++ TE + V +++ H LG +HRD+
Sbjct: 68 YSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDI 127
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KP+N L + +K DFGL
Sbjct: 128 KPDNLLL---DSKGHVKLSDFGL 147
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 2e-11
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K T + +A K + K + ++DV+ E RI+ A HP + +
Sbjct: 3 LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ + VME GG+L +I + + E ++ + + H GV++RDL
Sbjct: 63 CCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K +N L E K DFG+
Sbjct: 123 KLDNILL---DAEGHCKLADFGM 142
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 2e-11
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + +K+G+G FG +L K+ + K I K+ +E E ++E+ ++ + HP
Sbjct: 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEK-EASKKEVILLAKMK-HP 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRG-HYTERKAAD-LTRIIVGVVEACH 246
N++ ++++ + +VME C GG+L RI QRG ++E + +I +G ++ H
Sbjct: 60 NIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG-LKHIH 118
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+K +N A L DFG++
Sbjct: 119 DRKILHRDIKSQNIFLSKNGMVAKLG--DFGIA 149
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 3e-11
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + +K+G+GQF + +K A K + ++ + +D +EI ++ L HP
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHP 62
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRII----QRGHYTERKAADLTRIIVGVVEAC 245
NVI+ + ++ + +++V+EL G+L I Q+ ER + VE
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
HS VMHRD+KP N +FI L D GL FF
Sbjct: 123 HSRRVMHRDIKPAN-VFITATGVVKLG--DLGLGRFF 156
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV-EDVRREIRIMHHL--A 186
Y ++G+G +GT + + T + A K + R +EE + REI ++ L
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKV--RVPLSEEGIPLSTLREIALLKQLESF 58
Query: 187 GHPNVIQI-----VGAYEDAVAVHVVMELC----AGGELFDRIIQRGHYTERKAADLTRI 237
HPN++++ + + + +V E A + + G DL R
Sbjct: 59 EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLAT--YLSKCPKPG-LPPETIKDLMRQ 115
Query: 238 IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ V+ HS ++HRDLKP+N L + + +K DFGL+
Sbjct: 116 LLRGVDFLHSHRIVHRDLKPQNILVTSDGQ---VKIADFGLA 154
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 3e-11
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L +K T +A K + K + +E V +R E I+ G V+++
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG-AWVVKMF 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++D ++++ME GG++ ++++ +E V ++A H LG +HRD+
Sbjct: 68 YSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDI 127
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KP+N L + +K DFGL
Sbjct: 128 KPDNLLL---DAKGHVKLSDFGL 147
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 3e-11
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDV--RREIRIMHHLAGHPNVIQ 193
+G+G FG + +K T++ +A K ++K+++ +++V R I + L P ++
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ +++ +++V + +GGELF + + G ++E +A +V +E H +++R
Sbjct: 61 LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
DLKPEN L + DFGLS + LT
Sbjct: 121 DLKPENILL---DATGHIALCDFGLS---KANLT 148
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 4e-11
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+LG+G G+ C K T FA K+I + + + RE+ I P +++
Sbjct: 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTD--PNPDLQKQILRELEINKSCK-SPYIVK 63
Query: 194 IVGAY--EDAVAVHVVMELCAGGEL---FDRIIQRGHYTERKAADLTRIIVGVVEAC--- 245
GA+ E + ++ + ME C GG L + ++ +RG K L +I V++
Sbjct: 64 YYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKV--LGKIAESVLKGLSYL 121
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS ++HRD+KP N L + +K DFG+S
Sbjct: 122 HSRKIIHRDIKPSNILL---TRKGQVKLCDFGVS 152
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 4e-11
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
K+G+G +G F C + T + A K K ED ++ REIR++ L HPN
Sbjct: 8 KIGEGSYGVVFKCRNRETGQIVAIK-----KFVESEDDPVIKKIALREIRMLKQLK-HPN 61
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLG 249
++ ++ + +H+V E C + + + + E + + V CH
Sbjct: 62 LVNLIEVFRRKRKLHLVFEYC-DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+HRD+KPEN L Q + +K DFG +
Sbjct: 121 CIHRDVKPENILITKQGQ---IKLCDFGFARILTGP 153
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 4e-11
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + +K+G+GQF + + + A K + ++ + +D +EI ++ L HP
Sbjct: 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHP 62
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRII-----QRGHYTERKAADLTRIIVGVVEA 244
NVI+ + ++ + +++V+EL G+L R+I Q+ ER + +E
Sbjct: 63 NVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
HS +MHRD+KP N +FI +K D GL FF
Sbjct: 122 MHSKRIMHRDIKPAN-VFITAT--GVVKLGDLGLGRFF 156
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 5e-11
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K T + FA K++ K + ++DVE E R++ HP + +
Sbjct: 3 LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF 62
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ + VME GG+L I G + E +A I+ ++ H G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL 122
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K +N L ++ +K DFG+
Sbjct: 123 KLDNVLL---DKDGHIKIADFGM 142
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 5e-11
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K T + +A K + K + ++DVE E R++ P + Q+
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLH 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ ++ VME GG+L I Q G + E A I + HS G+++RDL
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K +N + E +K DFG+
Sbjct: 128 KLDNVML---DAEGHIKIADFGM 147
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 63.6 bits (154), Expect = 5e-11
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L EKA+ K +A K + K + +++V E R++ + HP + +
Sbjct: 3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTSLK 61
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ + VME GGELF + + ++E + IV ++ HS +++RDL
Sbjct: 62 YSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL 121
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K EN + ++ +K DFGL
Sbjct: 122 KLENLML---DKDGHIKITDFGL 141
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 5e-11
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y +G G +G + T ++ A K ++ R + + RE+R++ H+ H
Sbjct: 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLS-RPFQSAIHAKRTYRELRLLKHMD-HE 74
Query: 190 NVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
NVI ++ + ED V++V L G +L + I++ ++ L I+ ++
Sbjct: 75 NVIGLLDVFTPASSLEDFQDVYLVTHL-MGADL-NNIVKCQKLSDDHIQFLVYQILRGLK 132
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS G++HRDLKP N + +N E+ LK +DFGL+
Sbjct: 133 YIHSAGIIHRDLKPSN-IAVN--EDCELKILDFGLA 165
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 6e-11
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKR-KLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
LG G FG V KA KE + AK ++ +EE++ED EI I+ HPN++ +
Sbjct: 13 LGDGAFGK----VYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK-HPNIVGL 67
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLGVMHR 253
AY + +++E C GG L +++ TE + + R ++ + HS V+HR
Sbjct: 68 YEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
DLK N L + +K DFG+S
Sbjct: 128 DLKAGNILL---TLDGDVKLADFGVS 150
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.9 bits (154), Expect = 6e-11
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 38/181 (20%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHLAGHPNV 191
++G+G +G + K T + A K I ++ E++ + REI+++ L HPN+
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVALKKI---RMENEKEGFPITAIREIKLLQKL-RHPNI 60
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELF--------D--RIIQRG--HYTERKAADLTRIIV 239
+++ E ++ G ++ D ++ +TE + + ++
Sbjct: 61 VRL---KE-------IVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLL 110
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF----RPGLTFRV---WL 292
++ HS G++HRD+K N L IN LK DFGL+ + T RV W
Sbjct: 111 EGLQYLHSNGILHRDIKGSNIL-INNDGV--LKLADFGLARPYTKRNSADYTNRVITLWY 167
Query: 293 R 293
R
Sbjct: 168 R 168
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 6e-11
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L KA +K +A K + K+ + +++ + + E ++ HP ++ +
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ A ++ V++ GGELF + + + E +A I + HSL +++RDL
Sbjct: 63 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KPEN L +Q + DFGL
Sbjct: 123 KPENILLDSQGH---IVLTDFGL 142
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 8e-11
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
G+ K+ Y+ K+GQG GT + ++ AT +E A I + L + E + EI +M
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMR 72
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
+PN++ + +Y + VVME AGG L D ++ E + A + R + +E
Sbjct: 73 E-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
HS V+HRD+K +N L + +K DFG P
Sbjct: 131 FLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 168
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 9e-11
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+ LG+G FG FL K T + FA K++ K + ++DVE E R++ HP +
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL--TRIIVGVVEACHSLGVM 251
+ ++ + VME GG+L IQ H + A II G ++ HS G++
Sbjct: 61 LYCTFQTKENLFFVMEYLNGGDLMFH-IQSCHKFDLPRATFYAAEIICG-LQFLHSKGIV 118
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGL 278
+RDLK +N L + +K DFG+
Sbjct: 119 YRDLKLDNILL---DTDGHIKIADFGM 142
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 1e-10
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 353 KMIDTDNSGYITLEELKKGLQRVGANLMDSE----IDGLMQAGDIDNSGTMDYGEFIAAM 408
K++D D GYI +EEL+K L+ +G L D E I+ D D G + + EF+ AM
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 1e-10
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN-VIQI 194
LG+G FG C +AT K +ACK + K++L + E E RI+ + H ++ +
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV--HSRFIVSL 58
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRII----QRGHYTERKAADLTRIIVGVVEACHSLGV 250
A++ + +VM + GG+L I + + E +A T I+ +E H +
Sbjct: 59 AYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI 118
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++RDLKPEN L N + ++ D GL++ + G
Sbjct: 119 IYRDLKPENVLLDN---DGNVRISDLGLAVELKDG 150
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-10
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R LG+G FG C +AT K +ACK + K+++ + E +I+ + V+
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR-FVVS 64
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVM 251
+ AYE A+ +V+ L GG+L I G + E +A I +E H ++
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+RDLKPEN L + ++ D GL++ G T +
Sbjct: 125 YRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIK 159
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 1e-10
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED-------VEDVRREIRIMHHL 185
G +G+G +G +L + T + A K + V+ +R EI + L
Sbjct: 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H N++Q +G + + +E GG + + G + E+ T ++ +
Sbjct: 66 D-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYL 124
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS G++HRDLK +N L ++ K DFG+S
Sbjct: 125 HSKGILHRDLKADNLL-VDAD--GICKISDFGIS 155
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 1e-10
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIA--KRKLTTEEDVEDVRREIRIMHHLAGHPN 190
G+ LGQG FG +LC + T +E A K + T ++V + EI+++ +L H
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HER 65
Query: 191 VIQIVGAYEDAV--AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
++Q G D + + ME GG + D++ G TE TR I+ + HS
Sbjct: 66 IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN 125
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+K N L + +K DFG S
Sbjct: 126 MIVHRDIKGANIL---RDSAGNVKLGDFGAS 153
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-10
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E+++ ++G+G FG + ++ T++ A K I + E+++ED+++EI ++
Sbjct: 3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQ-C 59
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
P + + G+Y + ++ME GG D +++ G E A + R I+ ++ H
Sbjct: 60 DSPYITRYYGSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLH 118
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+K N L E+ +K DFG++
Sbjct: 119 SERKIHRDIKAANVLL---SEQGDVKLADFGVA 148
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 1e-10
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K + FA K++ K + ++DVE E R++ +P + +
Sbjct: 3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ + VME GG+L I +G + +A IV ++ HS G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL 122
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K +N + + +K DFG+
Sbjct: 123 KLDNVML---DRDGHIKIADFGM 142
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-10
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 139 GQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAY 198
G +G +L K T++ FA K I K+ L ++ V E I+ A +P V+ + ++
Sbjct: 12 GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILT-FAENPFVVSMFCSF 70
Query: 199 EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHSLGVMHRD 254
E + +VME GG+ + G D+ R+ V +E H+ G++HRD
Sbjct: 71 ETKRHLCMVMEYVEGGDCATLLKNIGAL----PVDMARMYFAETVLALEYLHNYGIVHRD 126
Query: 255 LKPENFLFINQQEEAPLKTIDFGLS 279
LKP+N L + +K DFGLS
Sbjct: 127 LKPDNLLITSMGH---IKLTDFGLS 148
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 61.9 bits (150), Expect = 1e-10
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K T + +A K + K + ++DVE E R++ P + Q+
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLH 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ ++ VME GG+L +I Q G + E A I + HS G+++RDL
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K +N + E +K DFG+
Sbjct: 128 KLDNVML---DSEGHIKIADFGM 147
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 1e-10
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
G+ K+ Y+ K+GQG GT + ++ AT +E A K + L + E + EI +M
Sbjct: 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQM---NLQQQPKKELIINEILVMR 71
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
+PN++ + +Y + VVME AGG L D ++ E + A + R + ++
Sbjct: 72 E-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALD 129
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
HS V+HRD+K +N L + +K DFG P
Sbjct: 130 FLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 167
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 2e-10
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R LG+G FG C +AT K +ACK + K+++ + E +I+ + V+
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ-FVVN 64
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVM 251
+ AYE A+ +V+ + GG+L I G+ + E +A I+ +E H +
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+RDLKPEN L + ++ D GL++ G + R
Sbjct: 125 YRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIR 159
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 2e-10
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 133 GRKLGQGQFGTTFLCVEKATQKEFACKSI------AKRKLTTEEDVEDVRREIRIMHHLA 186
G +G G FG+ +L + ++ + A K + A K ++ + REI ++ L
Sbjct: 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ 64
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
H N++Q +G+ DA +++ +E GG + + G + E + R I+ + H
Sbjct: 65 -HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLH 123
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ G++HRD+K N L N+ +K DFG+S
Sbjct: 124 NRGIIHRDIKGANILVDNK---GGIKISDFGIS 153
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 30/163 (18%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIR 180
Y +G G +G ++ + K+ A K I AKR L RE++
Sbjct: 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL----------RELK 56
Query: 181 IMHHLAGHPNVIQIVGAY----EDAVAVHVVMELCAGGELFDRIIQRGHYTERKA-ADLT 235
I+ H H N+I I D V+VVM+L +L I TE L
Sbjct: 57 ILRHFK-HDNIIAIRDILRPPGADFKDVYVVMDL-MESDLHHIIHSDQPLTEEHIRYFLY 114
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+++ G+ + HS V+HRDLKP N L +N+ E L+ DFG+
Sbjct: 115 QLLRGL-KYIHSANVIHRDLKPSN-LLVNEDCE--LRIGDFGM 153
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 2e-10
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + +++V E R++ + + HP + +
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 61
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRD 254
+++ + VME GGELF + + ++E +A IV ++ HS V++RD
Sbjct: 62 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 121
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
LK EN + ++ +K DFGL
Sbjct: 122 LKLENLML---DKDGHIKITDFGL 142
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
K+G+G G + +K+T ++ A K K L ++ E + E+ IM HPN++++
Sbjct: 26 KIGEGSTGIVCIATDKSTGRQVAVK---KMDLRKQQRRELLFNEVVIMRDYQ-HPNIVEM 81
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 82 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140
Query: 255 LKPENFLFINQQEEAPLKTIDFG 277
+K ++ L + +K DFG
Sbjct: 141 IKSDSILL---TSDGRVKLSDFG 160
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 3e-10
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIA--KRKLTTEEDVEDVRREIRIMHHLAG 187
+ LG+ LG+G FG +LC + T +E A K + T ++V + EI+++ +L
Sbjct: 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR- 62
Query: 188 HPNVIQIVGAYEDAV--AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H ++Q G D + + +E GG + D++ G TE TR I+ V
Sbjct: 63 HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYL 122
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS ++HRD+K N L + +K DFG S
Sbjct: 123 HSNMIVHRDIKGANIL---RDSAGNVKLGDFGAS 153
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 4e-10
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG ++ TQ+ +A K+I K + + +V E ++ + P ++ +
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLK 59
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ +++V+ GGELF + + G + +A T ++ +E H V++RDL
Sbjct: 60 FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KPEN L Q A DFGL
Sbjct: 120 KPENILLDYQGHIA---LCDFGL 139
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 4e-10
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 20/134 (14%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIM-HHL-AGHPNVI 192
KL G+FG + K TQK F K I + I M H L +PN I
Sbjct: 23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----------AIEPMVHQLMKDNPNFI 72
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG-VVEACHSL--- 248
++ + ++M+ G+LFD + + G +E + I+ +VEA + L
Sbjct: 73 KLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSE----AEVKKIIRQLVEALNDLHKH 128
Query: 249 GVMHRDLKPENFLF 262
++H D+K EN L+
Sbjct: 129 NIIHNDIKLENVLY 142
|
Length = 267 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 4e-10
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L KA K +A K + K+ + +++ + + E ++ HP ++ +
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ A ++ V++ GGELF + + + E +A I + HSL +++RDL
Sbjct: 63 YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KPEN L +Q + DFGL
Sbjct: 123 KPENILLDSQ---GHVVLTDFGL 142
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K T + +A K + K + ++DVE E R++ P + Q+
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ ++ VME GG+L I Q G + E +A I + H G+++RDL
Sbjct: 68 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDL 127
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
K +N + E +K DFG+
Sbjct: 128 KLDNVML---DSEGHIKIADFGM 147
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 5e-10
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-TEEDVEDVRREI 179
R+ + E++ + +LG G FG + KA KE + AK T +EE++ED EI
Sbjct: 5 RRDLDPNEVWEIIGELGDGAFGKVY----KAKNKETGALAAAKVIETKSEEELEDYMVEI 60
Query: 180 RIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRI---IQRGHYTERKAADLTR 236
I+ HP +++++GA+ + +++E C GG + D I + RG TE + + R
Sbjct: 61 EILAT-CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVICR 117
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ ++ HS+ ++HRDLK N L + +K DFG+S
Sbjct: 118 QMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVS 157
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 5e-10
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E + + + + +G FG +L +K K +A K + K + + V V+ E R L+
Sbjct: 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAE-RDALALSK 62
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P ++ + + + A V++VME GG++ + G++ E A + ++ H
Sbjct: 63 SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G++HRDLKP+N L N E +K DFGLS
Sbjct: 123 HGIIHRDLKPDNMLISN---EGHIKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 6e-10
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV-EDVRREIRIMHHL 185
+E +LGR +G+GQFG + V + + E ++ K T V E +E IM
Sbjct: 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF 64
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY--TERKAADLTRIIVGVVE 243
HP++++++G + V +VMEL GEL Y + + DL +I+ +
Sbjct: 65 -DHPHIVKLIGVITEN-PVWIVMELAPLGEL-------RSYLQVNKYSLDLASLILYSYQ 115
Query: 244 AC------HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRD+ N L + +K DFGLS
Sbjct: 116 LSTALAYLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLS 154
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 6e-10
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIA---KRKLTTEEDVEDVRREIRIMHHL 185
++ G LG+G +GT + C + A K + L E++ E ++ E+ ++ L
Sbjct: 1 EWTKGEVLGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL 59
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H N++Q +G D + + ME GG + + + G E T+ I+ V
Sbjct: 60 K-HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYL 118
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
H+ V+HRD+K N + + +K IDFG
Sbjct: 119 HNNCVVHRDIKGNNVMLM---PNGIIKLIDFG 147
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 6e-10
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R LG G G F V+ K A K I LT + V+ REI+I+ L H N+++
Sbjct: 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIV---LTDPQSVKHALREIKIIRRLD-HDNIVK 66
Query: 194 IVGAY--------EDAVAVHVVMELCAGGELFD----RIIQRGHYTERKAADLTRIIVGV 241
+ ED ++ + + E + ++++G +E A ++
Sbjct: 67 VYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRG 126
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++ HS V+HRDLKP N +FIN E+ LK DFGL+ P
Sbjct: 127 LKYIHSANVLHRDLKPAN-VFIN-TEDLVLKIGDFGLARIVDP 167
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 8e-10
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 134 RKLGQGQFGTTFLCV---EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
++LG G FG+ V + + E A K++ + + + + RE +M L HP
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKK--EFLREASVMAQL-DHPC 57
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL-TRIIVGV--VEACHS 247
+++++G + + +VMEL G L + +R +L ++ +G+ +E+ H
Sbjct: 58 IVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH- 115
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+HRDL N L +N+ + K DFG+S G
Sbjct: 116 --FVHRDLAARNVLLVNRHQ---AKISDFGMSRALGAG 148
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 53.3 bits (129), Expect = 1e-09
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 431 GSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
G IT +EL+ A G L + +++ + RE D D DG+I + EF ++Q
Sbjct: 1 EKGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQR 52
|
Length = 53 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 1e-09
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+++++ R++G G FG + + T + A K ++ + E +D+ +E+R + L
Sbjct: 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR 73
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
HPN I+ G Y +VME C G ++ + + + E + A + + +
Sbjct: 74 -HPNTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAY 130
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
HS +HRD+K N L E +K DFG + P +F
Sbjct: 131 LHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSPANSF 171
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
++G G FG + T + A K ++ T E +D+ +E++ + L HPN I+
Sbjct: 28 EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEY 86
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
G Y +VME C G + + E + A +T + + HS ++HRD
Sbjct: 87 KGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRD 146
Query: 255 LKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
+K N L E +K DFG + P +F
Sbjct: 147 IKAGNILL---TEPGQVKLADFGSASKSSPANSF 177
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 2e-09
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEEEI KE FK+ D D +G+I+ EL+ + +G L D E+D +++ D+
Sbjct: 75 RKMKDTDSEEEI---KEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 132 DGDGQINYEEFVKMMM 147
|
Length = 149 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 2e-09
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R LG+G FG C +AT K +ACK + K+++ + E +I+ + V+
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVS 64
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVM 251
+ AYE A+ +V+ L GG+L I G+ + E +A I +E H ++
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+RDLKPEN L + ++ D GL++ G T R
Sbjct: 125 YRDLKPENILL---DDYGHIRISDLGLAVEIPEGETIR 159
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R LG+G FG C +AT K +ACK + K+++ + E RI+ + V+
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSR-FVVS 64
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVM 251
+ AYE A+ +V+ + GG+L I G+ + E++A + +E ++
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+RDLKPEN L + ++ D GL++ G T R
Sbjct: 125 YRDLKPENILL---DDRGHIRISDLGLAVQIPEGETVR 159
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 58.6 bits (141), Expect = 2e-09
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+++++ R++G G FG + + T + A K ++ + E +D+ +E++ + +
Sbjct: 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK 83
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HPN I+ G Y +VME C G + + E + A +T + + H
Sbjct: 84 -HPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH 142
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
S ++HRD+K N L E +K DFG + P +F
Sbjct: 143 SHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPANSF 181
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 47/180 (26%)
Query: 130 YSLGRKLGQGQFGTTFLC----VEKATQKEFACKSI---------AKRKLTTEEDVEDVR 176
Y L ++LGQG +G +C E + ++ A K I AKR L
Sbjct: 2 YELIKELGQGAYGI--VCSARNAETSEEETVAIKKITNVFSKKILAKRAL---------- 49
Query: 177 REIRIMHHLAGHPNVIQIVGAYE-DAVAVHVVMELCAGGELFD----RIIQRG------H 225
RE++++ H GH N I Y+ D V EL EL + +II+ G H
Sbjct: 50 RELKLLRHFRGHKN---ITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAH 106
Query: 226 YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ + + +I+ G+ + HS V+HRDLKP N L +N E LK DFGL+ F
Sbjct: 107 FQ----SFIYQILCGL-KYIHSANVLHRDLKPGNLL-VNADCE--LKICDFGLARGFSEN 158
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L K K +A K + K+ + ++ + + E ++ HP ++ +
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ ++ V++ GGELF + + + E +A I + HS+ +++RDL
Sbjct: 63 YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KPEN L +Q + DFGL
Sbjct: 123 KPENILLDSQGH---VVLTDFGL 142
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + K+G+G FG F V KA ++ +A K I K+ E E + E R++ L
Sbjct: 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAI-DEARVLAKL-DSS 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGH-YTERKAADL-TRIIVGVVEACH 246
+I+ ++ D +++VME G+L + +QRG E + +I++G + H
Sbjct: 60 YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG-LAHLH 118
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
S ++HRD+K N LF++ + +K D G++ F
Sbjct: 119 SKKILHRDIKSLN-LFLDAYDN--VKIGDLGVAKLLSDNTNF 157
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 2e-09
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
N +E + + +LG G FG + K T A K I + +EE++ED EI I+
Sbjct: 2 NPEEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILAS 58
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVE 243
HPN+++++ A+ + +++E CAGG + +++ TE + + + + +
Sbjct: 59 -CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALN 117
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H ++HRDLK N LF + +K DFG+S
Sbjct: 118 YLHENKIIHRDLKAGNILF---TLDGDIKLADFGVS 150
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
+LG+G +G+ + + + T A K I R E + E+ I+H A P ++
Sbjct: 8 ELGKGNYGSVYKVLHRPTGVTMAMKEI--RLELDESKFNQIIMELDILHK-AVSPYIVDF 64
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR-----IIVGVVEACHSLG 249
GA+ AV++ ME G L D++ G TE D+ R ++ G+
Sbjct: 65 YGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+KP N L +N + +K DFG+S
Sbjct: 124 IIHRDVKPTNVL-VNGNGQ--VKLCDFGVS 150
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 3e-09
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
K+G+G FG + V K E A K+ R + +E I+ HPN+++
Sbjct: 1 EKIGKGNFGDVYKGVLK-GNTEVAVKTC--RSTLPPDLKRKFLQEAEILKQYD-HPNIVK 56
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT--RIIVGVVEAC------ 245
++G +++VMEL GG L + +K LT +++ ++A
Sbjct: 57 LIGVCVQKQPIYIVMELVPGGSLLT-------FLRKKKNRLTVKKLLQMSLDAAAGMEYL 109
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRDL N L E LK DFG+S
Sbjct: 110 ESKNCIHRDLAARNCLV---GENNVLKISDFGMS 140
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 3e-09
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L K+ +A K + K+ + +++ + E ++ HP ++ +
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ A ++ V++ GGELF + + + E +A + + HSL +++RDL
Sbjct: 63 YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122
Query: 256 KPENFLFINQQEEAPLKTIDFGL 278
KPEN L +Q + DFGL
Sbjct: 123 KPENILLDSQGH---VVLTDFGL 142
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-09
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + +K+G+GQF + A K + L + D +EI ++ L HP
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHP 62
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRII-----QRGHYTERKAADLTRIIVGVVEA 244
NVI+ ++ + +++V+EL G+L R+I Q+ E+ + +E
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
HS VMHRD+KP N +FI +K D GL FF T
Sbjct: 122 MHSRRVMHRDIKPAN-VFITAT--GVVKLGDLGLGRFFSSKTT 161
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 57.8 bits (139), Expect = 4e-09
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R +G+G + L K T++ +A K + K + +ED++ V+ E + + HP ++
Sbjct: 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ ++ + V+E GG+L + ++ E A + I + H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120
Query: 254 DLKPENFLFINQQEEAPLKTIDFGL-SMFFRPGLT 287
DLK +N L E +K D+G+ RPG T
Sbjct: 121 DLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDT 152
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 4e-09
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR-REIRIMHHLAGHPNVIQ 193
KLG+G + T + + T + A K I L EE REI +M L H N
Sbjct: 7 KLGEGTYATVYKGRNRTTGEIVALKEI---HLDAEEGTPSTAIREISLMKELK-HEN--- 59
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRI------IVGVVEAC 245
IV ++ +H +L E D+ +++ + R A D + ++ + C
Sbjct: 60 IVRLHD---VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC 116
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
H V+HRDLKP+N L IN++ E LK DFGL+ F
Sbjct: 117 HENRVLHRDLKPQN-LLINKRGE--LKLADFGLARAF 150
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 5e-09
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG K T K +ACK + K++L + + E I+ + P ++ +
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLA 59
Query: 196 GAYEDAVAVHVVMELCAGGELFDRII---QRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
A+E + +VM L GG+L I +RG ER +I G++ HS+ +++
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILH-LHSMDIVY 118
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
RD+KPEN L +Q + D GL++ + G T
Sbjct: 119 RDMKPENVLLDDQGN---CRLSDLGLAVELKDGKT 150
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 5e-09
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 107 RISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
R+S + L G+ +E K+G+G G + EK T K+ A K + RK
Sbjct: 1 RVSHEQFRAALQLVVSPGDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK- 59
Query: 167 TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY 226
++ E + E+ IM H NV+ + +Y + VVME GG L D I+
Sbjct: 60 --QQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRM 115
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
E + A + ++ + H+ GV+HRD+K ++ L + + +K DFG
Sbjct: 116 NEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGF 164
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 6e-09
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKAT-QKEFACKSI-------AKRKLTTEEDVEDVRREIRI 181
Y++ LG G FG + +K Q A K I K K ++ + D+ E+ I
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG---GELFDRIIQRG-HYTERKAADLTRI 237
+ HPN+++ + + +++VM+L G GE F+ + ++ +TE + + I
Sbjct: 62 IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEER---IWNI 118
Query: 238 IVGVVEACHSLG----VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V +V A L ++HRDL P N I E+ + DFGL+
Sbjct: 119 FVQMVLALRYLHKEKRIVHRDLTPNN---IMLGEDDKVTITDFGLA 161
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 7e-09
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
N + Y L +++G G +G + T + A K I KL +D +++EI M
Sbjct: 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEI-FMVK 61
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
H N++ G+Y + + ME C GG L D G +E + A + R + +
Sbjct: 62 ECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAY 121
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS G MHRD+K N L + + +K DFG++
Sbjct: 122 LHSKGKMHRDIKGANILLTDNGD---VKLADFGVA 153
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 7e-09
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R++G G FG + + + A K ++ + E +D+ +E+R + L HPN IQ
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
G Y +VME C G + + E + A +T + + HS ++HR
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
D+K N L E +K DFG + P F
Sbjct: 140 DVKAGNILL---SEPGLVKLGDFGSASIMAPANXF 171
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
+LK + ++LG+G FG LC + T ++ A KS+ E+ D REI
Sbjct: 5 HLKFI----KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL--NHSGEEQHRSDFEREIE 58
Query: 181 IMHHLAGHPNVIQIVG-AYEDAVAVH-VVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
I+ L H N+++ G + ++ME G L R + H R +L R++
Sbjct: 59 ILRTLD-HENIVKYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRH---RDQINLKRLL 112
Query: 239 VGVVEAC------HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+ + C S +HRDL N L + E +K DFGL+
Sbjct: 113 LFSSQICKGMDYLGSQRYIHRDLAARNILVES---EDLVKISDFGLAKV 158
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 1e-08
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT---EEDVEDVRREIRIMHHLAGHP 189
G++LG G F + + + T A K + + T+ EE VE +R+EIR+M L HP
Sbjct: 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHP 63
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I+++GA + ++ +E AGG + + + G + E + T ++ + H
Sbjct: 64 HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ 123
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFG 277
++HRD+K N L + + L+ DFG
Sbjct: 124 IIHRDVKGANLLIDSTGQR--LRIADFG 149
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 2e-08
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 360 SGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411
G IT EELK+ L +G +L + E+D L + D D G + + EF + L
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQRL 53
|
Length = 53 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR-REIRIMHHLAGHPNVIQ 193
K+G+G +G + K T + A K I R + EE V REI ++ L HPN++
Sbjct: 7 KIGEGTYGVVYKGRNKKTGQIVAMKKI--RLESEEEGVPSTAIREISLLKELQ-HPNIVC 63
Query: 194 IVGAYEDAVAVHVVME-LCAGGELFDRIIQRGHYTERKAAD--LTRIIVGVVEACHSLGV 250
+ ++++ E L + + + +G Y + + L +I+ G++ CHS V
Sbjct: 64 LQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGIL-FCHSRRV 122
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
+HRDLKP+N L I+ + +K DFGL+ F G+ RV+
Sbjct: 123 LHRDLKPQN-LLIDNK--GVIKLADFGLARAF--GIPVRVY 158
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-08
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F D DG G I+ DE + + GL + L I D D DG++D EF M
Sbjct: 5 FRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAM 59
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 2e-08
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED-VRREIRIMHHLAGHPNVIQ 193
+LG G FG V K +K+ +I K E+ V D + RE IMH L +P +++
Sbjct: 2 ELGSGNFGCVKKGVYKMRKKQIDV-AIKVLKNENEKSVRDEMMREAEIMHQLD-NPYIVR 59
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH--SLGV- 250
++G E A A+ +VME+ +GG L + K ++T + VVE H S+G+
Sbjct: 60 MIGVCE-AEALMLVMEMASGGPL-------NKFLSGKKDEIT--VSNVVELMHQVSMGMK 109
Query: 251 -------MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L +NQ K DFGLS
Sbjct: 110 YLEGKNFVHRDLAARNVLLVNQHYA---KISDFGLS 142
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 30/161 (18%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-EDVEDVR-REIRIMHHLAGHPNVI 192
K+G+G +G + K T + A K I +L TE E V REI ++ L HPN++
Sbjct: 7 KIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNIV 62
Query: 193 QIVGAYEDAVAVHVV-----------MELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+++ +++V M+ + +I+ + L +++ G+
Sbjct: 63 KLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIK---------SYLFQLLQGL 113
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CHS V+HRDLKP+N L IN E +K DFGL+ F
Sbjct: 114 A-FCHSHRVLHRDLKPQN-LLIN--TEGAIKLADFGLARAF 150
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 4e-08
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
K+G+G +GT F + T + A K ++ ++D E V REI ++ L H N
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVALK-----RVRLDDDDEGVPSSALREICLLKELK-HKN 60
Query: 191 VIQIVGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
++++ + +V E C + FD G ++ + CHS
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSH 118
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
V+HRDLKP+N L IN+ E LK DFGL+ F
Sbjct: 119 NVLHRDLKPQNLL-INKNGE--LKLADFGLARAF 149
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL 185
L ++ +LG ++G G G + K T A K + R+ +E+ + + ++ ++
Sbjct: 14 LNDLENLG-EIGSGTCGQVYKMRFKKTGHVMAVKQM--RRTGNKEENKRILMDLDVVLKS 70
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVE 243
P +++ G + V + MEL + D++++R G E +T V +V+
Sbjct: 71 HDCPYIVKCYGYFITDSDVFICMELMS--TCLDKLLKRIQGPIPEDILGKMT---VAIVK 125
Query: 244 ACHSL----GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
A H L GV+HRD+KP N L +K DFG+S
Sbjct: 126 ALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGIS 162
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 5e-08
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 18/153 (11%)
Query: 132 LGRKLGQGQFGTTFLCV---EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
LG +G+G+FG L +K K S A + E V M L H
Sbjct: 10 LGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASV---------MTTLR-H 59
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACH 246
PN++Q++G +++V E A G L D + RG T + + +E
Sbjct: 60 PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E+ K DFGL+
Sbjct: 120 EKNFVHRDLAARNVLV---SEDLVAKVSDFGLA 149
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 5e-08
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL 185
+ + Y +++G G +GT +++ T + A K + R +E + RE+R++ H+
Sbjct: 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHM 71
Query: 186 AGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H NVI ++ + + ++VM G ++++ +E + L ++
Sbjct: 72 K-HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQML 128
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ H+ G++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 129 KGLKYIHAAGIIHRDLKPGN-LAVN--EDCELKILDFGLA 165
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 6e-08
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R +G+G + L K T++ +A K I K + +ED++ V+ E + + HP ++
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ ++ + V+E +GG+L + ++ E A + I + H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120
Query: 254 DLKPENFLFINQQEEAPLKTIDFGL-SMFFRPGLT 287
DLK +N L E +K D+G+ RPG T
Sbjct: 121 DLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDT 152
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 6e-08
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKE---FACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
Y L ++LG+G FGT +L +K E K I +L E V+ +E +++ L
Sbjct: 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQ-ANQEAQLLSKLD 60
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAD------LTRIIVG 240
HP +++ ++ + A ++ E C G +L ++ + H T + ++ ++++G
Sbjct: 61 -HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLG 118
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
V H ++HRDLK +N N LK DFG+S
Sbjct: 119 -VHYMHQRRILHRDLKAKNIFLKNNL----LKIGDFGVSRLL 155
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 7e-08
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH---PNVI 192
+G+G FG + C + T K +A K + K+++ ++ E + RIM L P ++
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFIV 60
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-DLTRIIVGVVEACHSLGVM 251
+ A+ + +++L GG+L + Q G ++E++ T II+G+ E H+ V+
Sbjct: 61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGL-EHMHNRFVV 119
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+RDLKP N L E ++ D GL+ F
Sbjct: 120 YRDLKPANILL---DEHGHVRISDLGLACDF 147
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 7e-08
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
K+G+G G + K++ K A K + RK ++ E + E+ IM H NV+++
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEM 82
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + VVME GG L D I+ E + A + ++ + H+ GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + + +K DFG
Sbjct: 142 IKSDSILLTH---DGRVKLSDFGF 162
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 152 TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV--GAYEDAVAVHVVME 209
T E A K + E RRE + L HPN++ ++ G + + V E
Sbjct: 2 TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLY-HPNIVALLDSGEAPPGL-LFAVFE 59
Query: 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA---CHSLGVMHRDLKPENFLFINQQ 266
G L + + G A + R+++ V++A H+ G++HRDLKP+N +
Sbjct: 60 YVPGRTLREVLAADGALP---AGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTG 116
Query: 267 EEAPLKTIDFGLS 279
K +DFG+
Sbjct: 117 VRPHAKVLDFGIG 129
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 14/170 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
Y + +G G FG ++ T + A K I K +T + RE++++ HL
Sbjct: 10 NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMK-PFSTPVLAKRTYRELKLLKHLR- 67
Query: 188 HPNVIQI----VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H N+I + + ED ++ V EL G R++ ++ I+ ++
Sbjct: 68 HENIISLSDIFISPLED---IYFVTELL--GTDLHRLLTSRPLEKQFIQYFLYQILRGLK 122
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLR 293
HS GV+HRDLKP N L IN E LK DFGL+ P +T V R
Sbjct: 123 YVHSAGVVHRDLKPSNIL-IN--ENCDLKICDFGLARIQDPQMTGYVSTR 169
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 131 SLGRKLGQGQFGTTFLCV---EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+L R LG G FG + + E + +E+D D E IM
Sbjct: 9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN- 67
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA----DLTRIIVGVVE 243
H N+++++G + + +++EL AGG+L + + ER ++ DL V +
Sbjct: 68 HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAK 127
Query: 244 ACHSL---GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
C L +HRD+ N L + K DFG++
Sbjct: 128 GCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA 166
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
K+G+G G + EK + ++ A K + RK ++ E + E+ IM H NV+++
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HQNVVEM 83
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRD 254
+Y + V+ME GG L D I+ + E + A + ++ + HS GV+HRD
Sbjct: 84 YKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 255 LKPENFLFINQQEEAPLKTIDFGL 278
+K ++ L + +K DFG
Sbjct: 143 IKSDSILL---TLDGRVKLSDFGF 163
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 46/171 (26%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI--AKRKLTTEEDVEDVRREIRIMHHLAG 187
Y + +KLG+G +G + +++ T++ A K I A R T D + REI + L
Sbjct: 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT---DAQRTFREIMFLQELGD 65
Query: 188 HPNVIQIVGAY--EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII------- 238
HPN+++++ E+ +++V E Y E DL +I
Sbjct: 66 HPNIVKLLNVIKAENDKDIYLVFE----------------YME---TDLHAVIRANILED 106
Query: 239 ----------VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++ HS V+HRDLKP N + +N + +K DFGL+
Sbjct: 107 VHKRYIMYQLLKALKYIHSGNVIHRDLKPSN-ILLNS--DCRVKLADFGLA 154
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH---PNVI 192
+G+G FG + C + T K +A K + K+++ ++ E + RIM L P ++
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFIV 60
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-DLTRIIVGVVEACHSLGVM 251
+ A+ + +++L GG+L + Q G ++E + II+G+ E H+ V+
Sbjct: 61 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGL-EHMHNRFVV 119
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+RDLKP N L E ++ D GL+ F
Sbjct: 120 YRDLKPANILL---DEHGHVRISDLGLACDF 147
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV-EDVRREIRIMHHLAGHPNVIQI 194
+G+G +G F + K + A K L D+ E++ E I+ L+ HPNV++
Sbjct: 26 IGKGTYGKVFKVLNKKNGSKAAVKI-----LDPIHDIDEEIEAEYNILKALSDHPNVVKF 80
Query: 195 VGAY--EDAV---AVHVVMELCAGGELFDRI---IQRGHYTERK--AADLTRIIVGVVEA 244
G Y +D + +V+ELC GG + D + ++RG E A L ++G ++
Sbjct: 81 YGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMG-LQH 139
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H +HRD+K N L E +K +DFG+S
Sbjct: 140 LHVNKTIHRDVKGNNILLTT---EGGVKLVDFGVS 171
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRK-LTTEEDVEDVRREIRI 181
++ +LG+ LG+G FG + ++K KE ++ K TE+D+ D+ E+ +
Sbjct: 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 73
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI---- 237
M + H N+I ++GA ++V++E + G L + + R + D+ R+
Sbjct: 74 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133
Query: 238 ------------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E +K DFGL+
Sbjct: 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLA 184
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 39/173 (22%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI--------AKRKLTTEEDVEDVR 176
++ Y +G+G +G K T + A K I +R L
Sbjct: 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL---------- 51
Query: 177 REIRIMHHLAGHPNVI-----QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA 231
REI+I+ H N+I ++E V++V EL + + + T+ +
Sbjct: 52 REIKILRRFK-HENIIGILDIIRPPSFESFNDVYIVQEL------METDLYKLIKTQHLS 104
Query: 232 AD-----LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
D L +I+ G+ + HS V+HRDLKP N L +N LK DFGL+
Sbjct: 105 NDHIQYFLYQILRGL-KYIHSANVLHRDLKPSNLL-LN--TNCDLKICDFGLA 153
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 22/156 (14%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV-EDVRREIRIMHHLAGHPNVIQI 194
+G+G +G + K T K+ + A + L DV E++ E I+ L HPNV++
Sbjct: 30 IGKGTYGKVY----KVTNKKDGSLA-AVKILDPISDVDEEIEAEYNILQSLPNHPNVVKF 84
Query: 195 VGAYEDA-----VAVHVVMELCAGG---ELFDRIIQRGHYTERKAADLTRIIVGV---VE 243
G + A + +V+ELC GG EL ++ G + A ++ I+ G ++
Sbjct: 85 YGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDE--AMISYILYGALLGLQ 142
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H+ ++HRD+K N L E +K +DFG+S
Sbjct: 143 HLHNNRIIHRDVKGNNILLTT---EGGVKLVDFGVS 175
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y R +G+G +G L + K++ K + R + E + +E +++ L HP
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRER-KAAEQEAQLLSQLK-HP 59
Query: 190 NVIQIVGAYE-DAVAVHVVMELCAGGELFDRII-QRGH-YTERKAADLTRIIVGVVEACH 246
N++ ++E + +++VM C GG+L+ ++ Q+G E + + I ++ H
Sbjct: 60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH 119
Query: 247 SLGVMHRDLKPEN 259
++HRDLK +N
Sbjct: 120 EKHILHRDLKTQN 132
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 3e-07
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL 185
L E Y+ +++G G +G+ ++K T ++ A K ++ R +E + RE+ ++ H+
Sbjct: 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLS-RPFQSEIFAKRAYRELTLLKHM 71
Query: 186 AGHPNVIQIVGAYEDAVAVH------VVMELCAGGELFDRI----IQRGHYTERKAADLT 235
H NVI ++ + AV+ +VM + + I +E K L
Sbjct: 72 Q-HENVIGLLDVFTSAVSGDEFQDFYLVMP-------YMQTDLQKIMGHPLSEDKVQYLV 123
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ ++ HS G++HRDLKP N L +N+ E LK +DFGL+
Sbjct: 124 YQMLCGLKYIHSAGIIHRDLKPGN-LAVNEDCE--LKILDFGLA 164
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 29/158 (18%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSI---AKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
LG G G+ T A K + AK + + + RE++IMH P
Sbjct: 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQ-----ILRELQIMHE-CRSPY 64
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-----RIIVGVVEAC 245
++ GA+ + + + ME G L DRI +K + +I V VVE
Sbjct: 65 IVSFYGAFLNENNICMCMEFMDCGSL-DRIY-------KKGGPIPVEILGKIAVAVVEGL 116
Query: 246 HSL----GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +MHRD+KP N L ++ + +K DFG+S
Sbjct: 117 TYLYNVHRIMHRDIKPSNILVNSRGQ---IKLCDFGVS 151
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMHHLAG 187
+LG+ LG+G FG ++A + L TE+D+ D+ E+ +M +
Sbjct: 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 74
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG------V 241
H N+I ++G ++VV+E A G L D + R E + D R +
Sbjct: 75 HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL 134
Query: 242 VEACH----------SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V + S +HRDL N L E+ +K DFGL+
Sbjct: 135 VSFAYQVARGMEFLASKKCIHRDLAARNVLV---TEDHVMKIADFGLA 179
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 4e-07
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHLAG 187
Y + R +G+G G +L + + A K I R+ +E + R RE +I L
Sbjct: 4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKI--REDLSENPLLKKRFLREAKIAADLI- 60
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFD--------RIIQRGHYTERKAADLTRI-- 237
HP ++ + D V+ M G L + + + I
Sbjct: 61 HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120
Query: 238 -IVGVVEACHSLGVMHRDLKPENFL 261
I +E HS GV+HRDLKP+N L
Sbjct: 121 KICATIEYVHSKGVLHRDLKPDNIL 145
|
Length = 932 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHLAG 187
Y + KLG+G FG + + T + A K I + E+D + REI+I+ L
Sbjct: 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKIL---MHNEKDGFPITALREIKILKKLK- 65
Query: 188 HPNVIQIVG-AYEDA------------VAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
HPNV+ ++ A E V ++ +L G L + TE +
Sbjct: 66 HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLEN---PSVKLTESQIKCY 120
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
++ + H ++HRD+K N L NQ LK DFGL
Sbjct: 121 MLQLLEGINYLHENHILHRDIKAANILIDNQ---GILKIADFGL 161
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 6e-07
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
++ L +G G +G + T + A K + TE++ E+++ EI ++ + H
Sbjct: 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINMLKKYSHH 72
Query: 189 PNVIQIVGAY-EDAVAVH-----VVMELCAGGELFDRI--IQRGHYTERKAADLTRIIVG 240
N+ GA+ + + H +VME C G + D + + E A + R I+
Sbjct: 73 RNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILR 132
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H+ V+HRD+K +N L E A +K +DFG+S
Sbjct: 133 GLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVS 168
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 6e-07
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 136 LGQGQFG-------TTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
LG G FG T L + A K++ RK T+++ ++ +E +M + H
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIR-VAVKTL--RKGATDQEKKEFLKEAHLMSNF-NH 58
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTER------KAADLTRIIVGVV 242
PN+++++G +++MEL GG+L + R ER +L I + V
Sbjct: 59 PNIVKLLGVCLLNEPQYIIMELMEGGDLLSYL--RDARVERFGPPLLTLKELLDICLDVA 116
Query: 243 EACHSLGVM---HRDLKPENFLFINQQEEAP--LKTIDFGLS 279
+ C L M HRDL N L + +A +K DFGL+
Sbjct: 117 KGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 18/153 (11%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSI--AKRKLTTE---EDVEDVRREIRIMHHLAGHP 189
KLG G FG V + K I A + L ++ + ++D +E IMH L H
Sbjct: 2 KLGDGSFGV----VRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD-HE 56
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHS 247
N+I++ G + +V EL G L DR+ + GH+ D I + S
Sbjct: 57 NLIRLYGVVLTHPLM-MVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES 115
Query: 248 LGVMHRDLKPEN-FLFINQQEEAPLKTIDFGLS 279
+HRDL N L + + +K DFGL
Sbjct: 116 KRFIHRDLAARNILLASDDK----VKIGDFGLM 144
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 7e-07
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 36/172 (20%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
K+G+G +G + +K T + A K I +L TE+ E V REI ++ L HPN
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVALKKI---RLETED--EGVPSTAIREISLLKELN-HPN 59
Query: 191 VIQIVGAYEDAVAVHVV-----------MELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
+++++ +++V M+ L +I+ Y +++
Sbjct: 60 IVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLY---------QLLQ 110
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
G+ CHS V+HRDLKP+N L I++ E LK DFGL+ F G+ R +
Sbjct: 111 GIA-YCHSHRVLHRDLKPQNLL-IDR--EGALKLADFGLARAF--GVPVRTY 156
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 7e-07
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
L + + E Y +G G +G+ + +++ A K ++ R + RE
Sbjct: 6 LNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLS-RPFQSLIHARRTYRE 64
Query: 179 IRIMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
+R++ H+ H NVI ++ + E+ V++V L G +L + I++ ++
Sbjct: 65 LRLLKHMK-HENVIGLLDVFTPATSIENFNEVYLVTNL-MGADL-NNIVKCQKLSDEHVQ 121
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L ++ ++ HS G++HRDLKP N + +N E+ L+ +DFGL+
Sbjct: 122 FLIYQLLRGLKYIHSAGIIHRDLKPSN-VAVN--EDCELRILDFGLA 165
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 7e-07
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F DK+ G +T + + + GL T L I D DNDG +D EF M
Sbjct: 16 FRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAM 70
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 7e-07
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 14/122 (11%)
Query: 164 RKLTTEEDVEDVRREIRIMHHLAGHPNVI-QIVGAYEDAVAVHVVMELCAGGELFDRIIQ 222
+ + E D RE+ I+ LA + +++ + E +++ME G L
Sbjct: 27 KINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL------ 80
Query: 223 RGHYTERKAADLTRIIVGVVEACHSL---GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+E + D+ + ++ H L + H DL P N L + + L ID+ +
Sbjct: 81 -DEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKI---LGIIDWEYA 136
Query: 280 MF 281
+
Sbjct: 137 GY 138
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 8e-07
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMH 183
E Y +G+G +G C K T + A K K ED + V+ REIR++
Sbjct: 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIK-----KFLESEDDKMVKKIAMREIRMLK 55
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFD-RIIQRGHYTERKAADLTRIIVGVV 242
L H N++ ++ + +++V E L D G R L +I+ G+
Sbjct: 56 QLR-HENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGI- 113
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
E CHS ++HRD+KPEN L + +K DFG +
Sbjct: 114 EFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFART 149
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 8e-07
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVG 376
L+E FK+ D D GYI+ EEL+K L+ +G
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 8e-07
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
+G T + + Y + +G G G + ++ A K ++ R + + RE
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRE 73
Query: 179 IRIMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ +M H N+I ++ + E+ V++VMEL ++IQ ER +
Sbjct: 74 LVLMK-CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY 130
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +++ G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 131 LLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 8e-07
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 19/160 (11%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG + K + ++ +E D D E+ ++ L HPN+I ++
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69
Query: 196 GAYEDAVAVHVVMELCAGGELFD-----RII--------QRGHYTERKAADLTRIIVGVV 242
GA E+ +++ +E G L D R++ + G + + L + V
Sbjct: 70 GACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA 129
Query: 243 EACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +HRDL N L E K DFGLS
Sbjct: 130 TGMQYLSEKQFIHRDLAARNVLV---GENLASKIADFGLS 166
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 50.5 bits (120), Expect = 1e-06
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
+G T + + Y + +G G G + + A K ++ R + + RE
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRE 66
Query: 179 IRIMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ +M H N+I ++ + E+ V++VMEL ++IQ ER +
Sbjct: 67 LVLMK-CVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSY 123
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +++ G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 124 LLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 166
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G G +G+ + T A K ++ R + + RE+R++ H+ H NVI ++
Sbjct: 25 VGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMK-HENVIGLL 82
Query: 196 GAYEDAVA------VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+ A + V++V L G +L + I++ T+ L I+ ++ HS
Sbjct: 83 DVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 140
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKP N L +N E+ LK +DFGL+
Sbjct: 141 IIHRDLKPSN-LAVN--EDCELKILDFGLA 167
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
+ ++LG GQFG L + + + A K I + ++ ++ +E E ++M L+ HPN
Sbjct: 7 TFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIE----EAKVMMKLS-HPN 60
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL-- 248
++Q+ G + +V E A G L + + +R + L + V EA L
Sbjct: 61 LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLES 118
Query: 249 -GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
G +HRDL N L E+ +K DFGL+ +
Sbjct: 119 NGFIHRDLAARNCLV---GEDNVVKVSDFGLARY 149
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 1e-06
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED-VRREIRIMHHLAGHPNVIQ 193
++G+G FG F +A A KS + T D++ +E RI+ + HPN+++
Sbjct: 2 RIGRGNFGEVFSGRLRADNTPVAVKSC---RETLPPDLKAKFLQEARILKQYS-HPNIVR 57
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII---VGVVEACHSLGV 250
++G +++VMEL GG+ + G K +L +++ +E S
Sbjct: 58 LIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESKHC 115
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E+ LK DFG+S
Sbjct: 116 IHRDLAARNCLV---TEKNVLKISDFGMS 141
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R +G+G + L K + +A K + K + +ED++ V+ E + + +P ++
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
+ ++ + +V+E GG+L + ++ E A I + H G+++R
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120
Query: 254 DLKPENFLFINQQEEAPLKTIDFGL-SMFFRPGLT 287
DLK +N L + +K D+G+ PG T
Sbjct: 121 DLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDT 152
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED--VEDVRREIRIMHHLAGHPNVI 192
K+G+G +G + +K T K A K K +L +E+ REI ++ L+ ++
Sbjct: 8 KIGEGTYGKVYKARDKNTGKLVALK---KTRLEMDEEGIPPTALREISLLQMLSESIYIV 64
Query: 193 QI-----VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT------RIIVGV 241
++ V ++++V E +L + G R T +++ GV
Sbjct: 65 RLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGV 123
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CH GVMHRDLKP+N L Q+ LK D GL F
Sbjct: 124 AH-CHKHGVMHRDLKPQNLLVDKQKGL--LKIADLGLGRAF 161
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 1e-06
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
+LG G FGT + K + E K++A + L + + ++ RE +M L +P
Sbjct: 2 ELGSGNFGTVKKGMYKMKKSE---KTVAVKILKNDNNDPALKDELLREANVMQQL-DNPY 57
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGV 250
+++++G E A + +VMEL G L + + H TE+ +L + ++
Sbjct: 58 IVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF 116
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L + Q K DFGLS
Sbjct: 117 VHRDLAARNVLLVTQHYA---KISDFGLS 142
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G +G + + +TQ A K I +R V+ + EI + +L H N++Q +
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLK-HRNIVQYL 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHSLGVMH 252
G+ + + ME GG L + + E+ T+ I+ ++ H ++H
Sbjct: 72 GSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVH 131
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLS 279
RD+K +N L +N +K DFG S
Sbjct: 132 RDIKGDNVL-VNTY-SGVVKISDFGTS 156
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 23/114 (20%)
Query: 177 REIRIMHHLAGHPNVIQIVGAY------EDAVAVHVVME-----LCAGGELFDRIIQRGH 225
RE+ +M L H N+I ++ + E+ V++VME LC ++IQ
Sbjct: 64 RELVLMK-LVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLC-------QVIQMDL 115
Query: 226 YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
ER + L +++ G+ + HS G++HRDLKP N I + + LK +DFGL+
Sbjct: 116 DHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSN---IVVKSDCTLKILDFGLA 165
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
++ KLG GQ+G + V K A K++ + + +VE+ +E +M + HPN
Sbjct: 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 63
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL----TRIIVGVVEACH 246
++Q++G +++ E G L D ++ + E A L T+I +E
Sbjct: 64 LVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSA-MEYLE 121
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+HRDL N L E +K DFGLS
Sbjct: 122 KKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMT 155
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 43.9 bits (105), Expect = 2e-06
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRV 375
LKE F++ D D G I EE K L+ +
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 3e-06
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRV 375
LKE FK D D G I+ EE K+ L+++
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 31/157 (19%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPNV 191
LG G G + + + I RKL E +R RE++++H P +
Sbjct: 9 LGAGNGGVVTKVLHRPSG------LIMARKLIHLEIKPAIRNQIIRELKVLHE-CNSPYI 61
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG-- 249
+ GA+ + + ME GG L D+++ +KA + I+G + G
Sbjct: 62 VGFYGAFYSDGEISICMEHMDGGSL-DQVL-------KKAGRIPENILGKISIAVLRGLT 113
Query: 250 -------VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 114 YLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVS 147
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 37/189 (19%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE----DVRREIRIMHHL 185
Y K+GQG FG F K T++ A K K+ E + E REI+I+ L
Sbjct: 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALK-----KVLMENEKEGFPITALREIKILQLL 68
Query: 186 AGHPNVIQIV--------GAYEDAVAVHVVMELCA---GGELFDRIIQRGHYTERKAADL 234
H NV+ ++ + ++V E C G L ++ ++ +T + +
Sbjct: 69 K-HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK---FTLSEIKKV 124
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF-------RPGLT 287
++++ + H ++HRD+K N L ++ LK DFGL+ F T
Sbjct: 125 MKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFGLARAFSLSKNSKPNRYT 181
Query: 288 FRV---WLR 293
RV W R
Sbjct: 182 NRVVTLWYR 190
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 4e-06
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+L++ R D+D DG+ID+ EF +++
Sbjct: 1 ELKEAFRLFDKDGDGKIDFEEFKDLLK 27
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 48.2 bits (114), Expect = 4e-06
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
++ L +G G +G + T + A K + T ++ E++++EI ++ + H
Sbjct: 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHH 62
Query: 189 PNVIQIVGAY--------EDAVAVHVVMELCAGGELFDRIIQRGHYT--ERKAADLTRII 238
N+ GA+ +D + +VME C G + D I T E A + R I
Sbjct: 63 RNIATYYGAFIKKNPPGMDDQL--WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 120
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ + H V+HRD+K +N L E A +K +DFG+S
Sbjct: 121 LRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVS 158
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV---EDVRREIRIMHHLAG 187
S G+ LG G FG K A +A + L E + E++IM HL
Sbjct: 38 SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGN 97
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV---VEA 244
H N++ ++GA + V+ E C G+L + ++R + DL V +
Sbjct: 98 HENIVNLLGACTIGGPILVITEYCCYGDLLN-FLRRKRESFLTLEDLLSFSYQVAKGMAF 156
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRDL N L + + +K DFGL+
Sbjct: 157 LASKNCIHRDLAARNVLLTHGK---IVKICDFGLA 188
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 5e-06
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIM 182
++ E L R +G+G +G + + + + A K K ++ E D + REI ++
Sbjct: 5 SVTEFEKLNR-IGEGTYGIVYRARDTTSGEIVALK---KVRMDNERDGIPISSLREITLL 60
Query: 183 HHLAGHPNVIQ----IVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTR 236
+L HPN+++ +VG + D++ +VME C L D + ++E + L
Sbjct: 61 LNLR-HPNIVELKEVVVGKHLDSI--FLVMEYCEQDLASLLDNMPTP--FSESQVKCLML 115
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ ++ H ++HRDLK N L ++ LK DFGL+
Sbjct: 116 QLLRGLQYLHENFIIHRDLKVSNLLLTDKGC---LKIADFGLA 155
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 42.4 bits (101), Expect = 6e-06
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+L++ +E D+D DG+I + EF +++
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 7e-06
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373
+ + E LSEEEI EM + +D D G I EE + +
Sbjct: 27 KSLGEGLSEEEI---DEMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 7e-06
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQK-------EFACKS--IAKRKL---TTEEDVEDVRREI 179
L KLG+GQFG LC + + EF + +A + L T+ D +EI
Sbjct: 9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68
Query: 180 RIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAD------ 233
+IM L +PN+I+++G + ++ E G+L + QR + A+
Sbjct: 69 KIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVS 127
Query: 234 ------LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+ I ++ SL +HRDL N L N +K DFG+S G
Sbjct: 128 IANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYT---IKIADFGMSRNLYSGDY 184
Query: 288 FRV 290
+R+
Sbjct: 185 YRI 187
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 7e-06
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
++ +G +G + +K T + A K KL E++ E REI I+ L HPN
Sbjct: 12 RIEEGTYGVVYRARDKKTGEIVALK-----KLKMEKEKEGFPITSLREINILLKL-QHPN 65
Query: 191 VIQI----VGAYEDAVAVHVVMELCAGGE-----LFDRIIQRGHYTERKAADLTRIIVGV 241
++ + VG+ D + ++VME E L + + Q +E K L ++
Sbjct: 66 IVTVKEVVVGSNLDKI--YMVMEYV---EHDLKSLMETMKQPFLQSEVKC--LMLQLLSG 118
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
V H ++HRDLK N L N+ LK DFGL
Sbjct: 119 VAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGL 152
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 7e-06
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 33/170 (19%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMH 183
+ Y K+G+G +G + ++ T + +IA +K+ E++ E V REI ++
Sbjct: 2 DQYEKVEKIGEGTYGVVYKARDRVTNE-----TIALKKIRLEQEDEGVPSTAIREISLLK 56
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVV-----------MELCAGGELFDRIIQRGHYTERKAA 232
+ H N++++ +++V M+ R+I+ Y
Sbjct: 57 EMQ-HGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLY------ 109
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+I+ G+ CHS V+HRDLKP+N L I+++ A LK DFGL+ F
Sbjct: 110 ---QILRGIA-YCHSHRVLHRDLKPQN-LLIDRRTNA-LKLADFGLARAF 153
|
Length = 294 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 1e-05
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
++F+ +D D G I+ +E + L + + L S + + D D G +D EF AM
Sbjct: 2 DQIFRSLDPDGDGLISGDEARPFLGK--SGLPRSVLAQIWDLADTDKDGKLDKEEFAIAM 59
Query: 409 LHL 411
HL
Sbjct: 60 -HL 61
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 130 YSLGRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
Y++ L G G F+C + +K+ K++ K REI I+ ++
Sbjct: 94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTIS- 144
Query: 188 HPNVIQIVGAYEDAVAVHVVMEL--CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H +I ++ AY V +VM C +LF + + G +A + R ++ +
Sbjct: 145 HRAIINLIHAYRWKSTVCMVMPKYKC---DLFTYVDRSGPLPLEQAITIQRRLLEALAYL 201
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
H G++HRD+K EN +F+++ E A L DFG
Sbjct: 202 HGRGIIHRDVKTEN-IFLDEPENAVLG--DFG 230
|
Length = 392 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 1e-05
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
++LG GQFG L +A K A K+I + ++ E+ +E E ++M L+ HP ++Q
Sbjct: 10 KELGSGQFGVVHLGKWRAQIK-VAIKAINEGAMSEEDFIE----EAKVMMKLS-HPKLVQ 63
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMH 252
+ G +++V E G L + + QR G ++ + + + +E +H
Sbjct: 64 LYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIH 123
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMF 281
RDL N L +K DFG++ +
Sbjct: 124 RDLAARNCLV---SSTGVVKVSDFGMTRY 149
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 61/174 (35%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIRIMHHLA 186
+G+G +G T ++ A K I AKR L REI+++ HL
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTL----------REIKLLRHLD 62
Query: 187 GHPNVIQIVG--------AYEDAVAVHVVMELCAGGELFD----RIIQRGHYTERKAADL 234
H NVI I A+ D V++V EL D +II R + L
Sbjct: 63 -HENVIAIKDIMPPPHREAFND---VYIVYEL------MDTDLHQII-------RSSQTL 105
Query: 235 T---------RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +++ G+ + HS V+HRDLKP N L +N LK DFGL+
Sbjct: 106 SDDHCQYFLYQLLRGL-KYIHSANVLHRDLKPSNLL-LN--ANCDLKICDFGLA 155
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
NL+++ +LG +G+G+FG Q E+ + +A + + + + E +M
Sbjct: 4 NLQKL-TLGEIIGEGEFGAVL-------QGEYTGQKVAVKNIKCDVTAQAFLEETAVMTK 55
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
L H N+++++G +++VMEL + G L + + RG L + + V E
Sbjct: 56 LH-HKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALV-SVIQLLQFSLDVAEG 112
Query: 245 CHSL---GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286
L ++HRDL N L E+ K DFGL+ G+
Sbjct: 113 MEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMGV 154
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 2e-05
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACK--SIAKRKL---TTEEDVEDVRREIRIMHHL 185
+LG+ LG+G FG + K+ K ++A + L T++D+ D+ E+ +M +
Sbjct: 15 TLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMI 74
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI-------- 237
H N+I ++GA ++V++E + G L + + R + D ++
Sbjct: 75 GKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFK 134
Query: 238 --------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E+ +K DFGL+
Sbjct: 135 DLVSCAYQVARGMEYLASQKCIHRDLAARNVLV---TEDNVMKIADFGLA 181
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 33/191 (17%)
Query: 127 KEMYSLGRKLGQGQFGTTFLC----VEKATQKEFACKSIAKRKL-----TTEEDVE---- 173
++ + KLG+GQFG LC +EK K+F+ + + ED
Sbjct: 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNAR 63
Query: 174 -DVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
D +EI+IM L PN+I+++ + + ++ E G+L ++ + R H + A
Sbjct: 64 NDFLKEIKIMSRLK-DPNIIRLLAVCITSDPLCMITEYMENGDL-NQFLSR-HEPQEAAE 120
Query: 233 DLTRIIVGVVEACH-------------SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ + SL +HRDL N L + +K DFG+S
Sbjct: 121 KADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV---GKNYTIKIADFGMS 177
Query: 280 MFFRPGLTFRV 290
G +R+
Sbjct: 178 RNLYSGDYYRI 188
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQ 193
LG+G FG+ LC Q + +A +KL +T E + D REI I+ L H N+++
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTG-EVVAVKKLQHSTAEHLRDFEREIEILKSLQ-HDNIVK 69
Query: 194 IVGAYEDA--VAVHVVMELCAGGELFDRIIQRGHYTE-RKAADLTRIIVGVVEACHSLGV 250
G A + +VME G L D + + + RK I +E S
Sbjct: 70 YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY 129
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L + E +K DFGL+
Sbjct: 130 VHRDLATRNILV---ESENRVKIGDFGLT 155
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E + + + +G+G FG + K K FA K + K ++ + R E ++ +
Sbjct: 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GD 59
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVE 243
+ + + A++D +++VM+ GG+L + + +R D+ R +V ++
Sbjct: 60 NQWITTLHYAFQDENNLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYLAEMVIAID 116
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ H L +HRD+KP+N L ++ DFG
Sbjct: 117 SVHQLHYVHRDIKPDNILM---DMNGHIRLADFG 147
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPNV 191
LG+G FG F K T K+ K+ K E+ ++++ E RI+ HPN+
Sbjct: 3 LGKGNFGEVF----KGTLKD---KTPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNI 54
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA---CHSL 248
++++G +++VMEL GG+ + R E K L + + S
Sbjct: 55 VKLIGVCTQRQPIYIVMELVPGGDFLSFL--RKKKDELKTKQLVKFALDAAAGMAYLESK 112
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E LK DFG+S
Sbjct: 113 NCIHRDLAARNCLV---GENNVLKISDFGMS 140
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 2e-05
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVI 192
+ +G G+FG K K +I K TE+ D E IM HPN+I
Sbjct: 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNII 68
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGV 250
+ G + V +V E G L D +++ G +T + + R I ++ +G
Sbjct: 69 HLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY 127
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L +N K DFGLS
Sbjct: 128 VHRDLAARNIL-VNSN--LVCKVSDFGLS 153
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHLAGHPNVI- 192
+G+G +G + +K T + A K K +L E++ + REI+I+ L H N++
Sbjct: 15 IGEGTYGQVYKARDKDTGELVALK---KVRLDNEKEGFPITAIREIKILRQLN-HRNIVN 70
Query: 193 --QIVGAYEDAV-------AVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGV 241
+IV +DA+ A ++V E +L +++ G H++E + ++
Sbjct: 71 LKEIVTDKQDALDFKKDKGAFYLVFEY-MDHDLMG-LLESGLVHFSEDHIKSFMKQLLEG 128
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ CH +HRD+K N L N+ + +K DFGL+ +
Sbjct: 129 LNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLY 166
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 3e-05
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
+ T + + Y + +G G G + A K ++ R + + RE
Sbjct: 12 VADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRE 70
Query: 179 IRIMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ ++ H N+I ++ + E+ V++VMEL ++I ER +
Sbjct: 71 L-VLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSY 127
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +++ G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 128 LLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 170
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 24/169 (14%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACK--SIAKRKL---TTEEDVEDVRREIRIMHHLA 186
LG+ LG+G FG + KE + +A + L TE+D+ D+ E+ +M +
Sbjct: 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 81
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-----------GHYTERKAA--D 233
H N+I ++GA ++V++E + G L + + R E + + D
Sbjct: 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141
Query: 234 LTRIIVGV---VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L V +E S +HRDL N L E+ +K DFGL+
Sbjct: 142 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLA 187
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE-DVRREIRIMHHLA 186
E Y KLG+G + T F K T+ A K I +L EE RE+ ++ L
Sbjct: 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKDLK 62
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-----GHYTERKAAD--LTRIIV 239
H N++ + D V H L E D+ +++ G+ L +I+
Sbjct: 63 -HANIVTL----HDIV--HTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILR 115
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ CH V+HRDLKP+N L IN++ E LK DFGL+
Sbjct: 116 GLA-YCHRRKVLHRDLKPQN-LLINERGE--LKLADFGLA 151
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 48/170 (28%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE-DVEDVRREIRIMHHLAGHPN 190
L RKLG GQFG + + T +A + L D +D E +IM L HP
Sbjct: 10 LLRKLGAGQFGEVWEGLWNNT------TPVAVKTLKPGTMDPKDFLAEAQIMKKLR-HPK 62
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGV 250
+IQ+ +++V EL G L + +Q G K L + V L
Sbjct: 63 LIQLYAVCTLEEPIYIVTELMKYGSLLE-YLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121
Query: 251 M---HRDLKPENFLFINQQEEAPLKTIDFGLSMFF-------RPGLTFRV 290
HRDL N L E K DFGL+ R G F +
Sbjct: 122 QNYIHRDLAARNVLV---GENNICKVADFGLARVIKEDIYEAREGAKFPI 168
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 4e-05
Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 19/160 (11%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG K ++ +++D D E+ ++ L HPN+I ++
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62
Query: 196 GAYEDAVAVHVVMELCAGGELFD-----RIIQ------RGHYTER--KAADLTRIIVGVV 242
GA E +++ +E G L D R+++ + T + L V
Sbjct: 63 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122
Query: 243 EACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +HRDL N L E K DFGLS
Sbjct: 123 RGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS 159
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED---VEDVRREIRI 181
NL+E+ +LGR G+FG FL K ++E + + L +D + RRE+ +
Sbjct: 6 NLQEITTLGR----GEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDM 61
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGEL--FDRIIQRGHY--------TERKA 231
L+ H NV++++G +A ++++E G+L F R + T++K
Sbjct: 62 FRKLS-HKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKV 120
Query: 232 ADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267
A T+I +G ++ + +HRDL N L +Q+E
Sbjct: 121 ALCTQIALG-MDHLSNARFVHRDLAARNCLVSSQRE 155
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 4e-05
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 134 RKLGQGQFGTTFLCVEKA----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
R LG+G FG LC T ++ A KS+ + + + D+++EI I+ +L H
Sbjct: 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEILRNLY-HE 66
Query: 190 NVIQIVGAYED--AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+++ G + + ++ME G L + + + + K + V + +
Sbjct: 67 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLK--QQLKYAVQICKGMDY 124
Query: 248 LG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
LG +HRDL N L ++ + +K DFGL+
Sbjct: 125 LGSRQYVHRDLAARNVLVESEHQ---VKIGDFGLT 156
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+ + + + +G+G FG + K T++ +A K + K ++ + R E ++ + G
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL--VNG 58
Query: 188 HPNVIQIVG-AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG----VV 242
I + A++D +++VM+ GG+L + + +R D+ R + +
Sbjct: 59 DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYIAEMVLAI 115
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ H L +HRD+KP+N L ++ DFG
Sbjct: 116 HSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFG 147
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 5e-05
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G +G C K T++ A K K EE E RE++++ L N++++
Sbjct: 9 VGEGAYGVVLKCRHKETKEIVAIKKF-KDSEENEEVKETTLRELKMLRTLK-QENIVELK 66
Query: 196 GAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHR 253
A+ +++V E EL + + G E+ + + ++I + CH ++HR
Sbjct: 67 EAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLI-KAIHWCHKNDIVHR 124
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLS 279
D+KPEN L LK DFG +
Sbjct: 125 DIKPENLLI---SHNDVLKLCDFGFA 147
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 6e-05
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 420 MYAAFSYFDKDGSGYITPDELQTACQQFG 448
+ AF FDKDG GYI+ +EL+ A + G
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 6e-05
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT---EEDVEDVRREIRIMHHLAGH 188
LGR LG G FG + +A + L + + + + E++IM HL H
Sbjct: 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH 100
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH 225
N++ ++GA ++++ E C G+L D + + H
Sbjct: 101 LNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKH 137
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 30/141 (21%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACK-----SIAKRKLTT----EEDV--EDVRREIRIMHH 184
+G+G FG + K T + +A K + KR T E DV RR I +H+
Sbjct: 9 IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHY 68
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVG 240
A++D +++VM+ GG+L + + +R D+ R +V
Sbjct: 69 ------------AFQDENNLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYLAEMVL 113
Query: 241 VVEACHSLGVMHRDLKPENFL 261
+++ H LG +HRD+KP+N L
Sbjct: 114 AIDSVHQLGYVHRDIKPDNVL 134
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E L RKLG GQFG ++ T K A K++ + E +E +IM L
Sbjct: 5 RESLKLERKLGAGQFGEVWMGTWNGTTK-VAVKTLKPGTM----SPEAFLQEAQIMKKLR 59
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA-- 244
H ++Q+ + +++V E + G L D ++ G + + L + + E
Sbjct: 60 -HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD-FLKSGEGKKLRLPQLVDMAAQIAEGMA 117
Query: 245 -CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S +HRDL N L E K DFGL+
Sbjct: 118 YLESRNYIHRDLAARNILV---GENLVCKIADFGLA 150
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 42/163 (25%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE-DVRREIRIMHHLAGHPNVI- 192
KLG+G + T + K T + A K I +L EE RE ++ L H N++
Sbjct: 12 KLGEGSYATVYKGRSKLTGQLVALKEI---RLEHEEGAPFTAIREASLLKDLK-HANIVT 67
Query: 193 --QIVGAYEDAVAV--HVV------MELCAGG------ELFDRIIQRGHYTERKAADLTR 236
I+ + V ++ M+ C GG LF + RG
Sbjct: 68 LHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRG------------ 115
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ CH V+HRDLKP+N L I+++ E LK DFGL+
Sbjct: 116 -----LAYCHQRRVLHRDLKPQN-LLISERGE--LKLADFGLA 150
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 8e-05
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 43/199 (21%)
Query: 130 YSLGRKLGQGQFGT---TFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
++LGR LG+G+FG+ L E + ++ A K + K + + D+E+ RE M
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVK-MLKADIFSSSDIEEFLREAACMKEF- 58
Query: 187 GHPNVIQIVGAYEDAVAVH-----------VVMELCAGGE-----LFDRIIQRGHYTERK 230
HPNVI+++G V++ V++ G+ L RI + +
Sbjct: 59 DHPNVIKLIG-----VSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQ 113
Query: 231 AADLTRIIVGV---VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM------F 281
L R ++ + +E S +HRDL N + E + DFGLS +
Sbjct: 114 T--LVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDY 168
Query: 282 FRPGLTFRV---WLRLHFL 297
+R G ++ WL L L
Sbjct: 169 YRQGCASKLPVKWLALESL 187
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 9e-05
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
N+KE+ L + +G+G+FG L ++ +A + + + + E +M
Sbjct: 4 NMKEL-KLLQTIGKGEFGDVML-------GDYRGNKVAVKCIKNDATAQAFLAEASVMTQ 55
Query: 185 LAGHPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
L H N++Q++G E+ +++V E A G L D + RG R ++ ++
Sbjct: 56 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLD 110
Query: 244 ACHSL------GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
C ++ +HRDL N L E+ K DFGL+
Sbjct: 111 VCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLT 149
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 9e-05
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACK--SIAKRKL---TTEEDVEDVRREIRI 181
++ LG+ LG+G FG K + ++A + L T++D+ D+ E+ +
Sbjct: 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMEL 70
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI---- 237
M + H N+I ++G ++V++E A G L + + R D+T++
Sbjct: 71 MKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130
Query: 238 ------------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +E S +HRDL N L E+ +K DFGL+
Sbjct: 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV---TEDNVMKIADFGLA 181
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 1e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374
SLSEEE+ +F+ DTD G I+ EE LQR
Sbjct: 20 SLSEEEVD---ILFREFDTDGDGKISFEEFCVLLQR 52
|
Length = 53 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE-DVRREIRIM 182
G L+ L KLG+G + T F K T+ A K I +L EE RE+ ++
Sbjct: 2 GKLETYVKLD-KLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLL 57
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV- 241
+L H N++ + D + H L E D ++ Y + ++ V +
Sbjct: 58 KNLK-HANIVTL----HDII--HTERCLTLVFEYLDSDLK--QYLDNCGNLMSMHNVKIF 108
Query: 242 -------VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ CH ++HRDLKP+N L IN++ E LK DFGL+
Sbjct: 109 MFQLLRGLSYCHKRKILHRDLKPQN-LLINEKGE--LKLADFGLA 150
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
+LG G G F K + I RKL E +R RE++++H P
Sbjct: 12 ELGAGNGGVVFKVSHKPS------GLIMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 64
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT-RIIVGVVEACHSLG 249
++ GA+ + + ME GG L + + G E+ ++ +I G+
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 124
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E +K DFG+S
Sbjct: 125 IMHRDVKPSNIL-VNSRGE--IKLCDFGVS 151
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 23/163 (14%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV---EDVRREIRIMHHLAGHPNVI 192
LG+G FG + + + S+A + L + ++ R+E +M L HPN++
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ-HPNIV 71
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-------------DLTRIIV 239
++G ++ E A G+L + +++ +++ A D I +
Sbjct: 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 240 GVVEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ L +HRDL N L E +K DFGLS
Sbjct: 132 QIAAGMEYLSSHHFVHRDLAARNCLV---GEGLTVKISDFGLS 171
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
+LK++ +GR G FGT + K + A K I R E++ + + ++ ++
Sbjct: 5 DLKDLGEIGR----GAFGTVNKMLHKPSGTIMAVKRI--RSTVDEKEQKRLLMDLDVVMR 58
Query: 185 LAGHPNVIQIVGA-YEDAVAVHVVMELCAGG-ELFDRII---QRGHYTERKAADLTRIIV 239
+ P +++ GA + + + MEL + F + + + E L +I V
Sbjct: 59 SSDCPYIVKFYGALFREGDCW-ICMELMDISLDKFYKYVYEVLKSVIPEEI---LGKIAV 114
Query: 240 GVVEACH----SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+A + L ++HRD+KP N L +K DFG+S
Sbjct: 115 ATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGIS 155
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 36/174 (20%)
Query: 135 KLGQGQFGTTFLCVEKATQ--KEFACKSIAKRKLTTEEDVEDVRREI---RIMHHLAGHP 189
+G+G +G + K + KE+A K K + REI R + H
Sbjct: 7 CIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH----E 62
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFD-------RIIQRGHYTERKAADLTRIIV--- 239
NV+ +V + + V + LFD +II+ + + K + +V
Sbjct: 63 NVVSLVEVFLEHADKSVYL-------LFDYAEHDLWQIIK--FHRQAKRVSIPPSMVKSL 113
Query: 240 ------GVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFRPGL 286
GV HS V+HRDLKP N L + + E +K D GL+ F L
Sbjct: 114 LWQILNGV-HYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPL 166
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 132 LGRKLGQGQFG-----TTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
G+ LG G FG T F ++ A K + T E E + E++I+ HL
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDE--REALMSELKILSHLG 99
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFD 218
H N++ ++GA V V+ E C G+L +
Sbjct: 100 QHKNIVNLLGACTHGGPVLVITEYCCYGDLLN 131
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMHHLAG 187
++ + +G G+FG K K+ +A + L ++++ D E IM
Sbjct: 7 TIEKVIGGGEFGEVCRGRLKLPGKK--EIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD- 63
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN+I++ G + V ++ E G L D+ + R + + L ++ G+
Sbjct: 64 HPNIIRLEGVVTKSRPVMIITEYMENGSL-DKFL-RENDGKFTVGQLVGMLRGIASGMKY 121
Query: 248 LGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L M HRDL N L +N K DFGLS
Sbjct: 122 LSEMNYVHRDLAARNIL-VNSNLVC--KVSDFGLS 153
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 47/168 (27%), Positives = 68/168 (40%), Gaps = 39/168 (23%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y LG +G G FG + + T ++ A K + +D + RE+ IM +L H
Sbjct: 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVL-------QDPQYKNRELLIMKNL-NHI 119
Query: 190 NVIQIVGAY--------EDAVAVHVVMELCAGGELFDRIIQRGH----YTERKAADLTRI 237
N+I + Y E + ++VVME I Q H + R L
Sbjct: 120 NIIFLKDYYYTECFKKNEKNIFLNVVMEF---------IPQTVHKYMKHYARNNHALPLF 170
Query: 238 IVGVV--EAC------HSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+V + + C HS + HRDLKP+N L LK DFG
Sbjct: 171 LVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI--DPNTHTLKLCDFG 216
|
Length = 440 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG G GT + T++ A K I T E + + E+ I++ P +I
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVIPLD--ITVELQKQIMSELEILYKCDS-PYIIGFY 65
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH---SLGVMH 252
GA+ + + E GG L Y + L RI V VV+ SL ++H
Sbjct: 66 GAFFVENRISICTEFMDGGSL-------DVYRKIPEHVLGRIAVAVVKGLTYLWSLKILH 118
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLS 279
RD+KP N L +N + + +K DFG+S
Sbjct: 119 RDVKPSNML-VNTRGQ--VKLCDFGVS 142
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 131 SLGRKLGQGQFGTTFLC--------VEKATQKEF---ACKSIAKRKLTTEEDV---EDVR 176
+ KLG+GQFG LC EKA + A +A + L + ED
Sbjct: 8 NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFL 67
Query: 177 REIRIMHHLAGHPNVIQIVGA 197
+E++I+ L+ PN+ +++G
Sbjct: 68 KEVKILSRLS-DPNIARLLGV 87
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE----EDVEDVRREIRIMHHLA 186
L +G+ + + K +A +K+ + ED++ +++EI L
Sbjct: 1 ELLTLIGKCFEDLMIVHLAKHKPTN---TLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ 57
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR-IIVGVVEA- 244
HPN++ V ++ ++VV L A G D + + H+ E I+ V+ A
Sbjct: 58 -HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLNAL 114
Query: 245 --CHSLGVMHRDLK 256
HS G +HR +K
Sbjct: 115 DYIHSKGFIHRSVK 128
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE-DVRREIRIMHHLA 186
E Y KLG+G + T + K T A K I +L EE RE+ ++ L
Sbjct: 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK 62
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-----GHYTERKAADL--TRIIV 239
H N++ + D + H L E D+ +++ G+ L +++
Sbjct: 63 -HANIVTL----HDII--HTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLR 115
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+ CH V+HRDLKP+N L IN++ E LK DFGL+
Sbjct: 116 GL-NYCHRRKVLHRDLKPQN-LLINERGE--LKLADFGLA 151
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 37.3 bits (88), Expect = 4e-04
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 348 LKEMFKMIDTDNSGYITLEELKK 370
LK++F+ DT+ G I+ EELK+
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKR 23
|
Length = 25 |
| >gnl|CDD|219339 pfam07223, DUF1421, Protein of unknown function (DUF1421) | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 22/90 (24%), Positives = 29/90 (32%), Gaps = 5/90 (5%)
Query: 28 PPEDRLPPPPKNEPSDNTERSLKAKDQSKA---SDTAPAPAPTPTPIQSTPPPPVKINNN 84
PP + P + + + + + S P PA P Q PPP V
Sbjct: 93 PPSHQYPSQLPPQQVQSVPQQPTPQQEPYYPPPSQPQPPPAQQPQAQQPQPPPQVPQQQQ 152
Query: 85 RQPPAPVPQQQQEQSKKPAHVKRISSAGLQ 114
Q P PQ QQ P +GL
Sbjct: 153 YQSPPQQPQYQQNPP--PQAQSAPQVSGLY 180
|
This family represents a conserved region approximately 350 residues long within a number of plant proteins of unknown function. Length = 357 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 131 SLGRKLGQGQFGTTF---LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
LG+ LG+G+FG+ L + +Q + A K++ K + T ++E+ E M
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFD- 59
Query: 188 HPNVIQIVG 196
HPNV++++G
Sbjct: 60 HPNVMKLIG 68
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 24/162 (14%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E ++L RKLG G FG + + K + A K + K +D ++E++ + L
Sbjct: 5 REEFTLERKLGSGYFGEVWEGLWKNRVR-VAIKIL---KSDDLLKQQDFQKEVQALKRLR 60
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY---TERKAADLTRII---VG 240
H ++I + V+++ EL G L + E + + +I
Sbjct: 61 -HKHLISLFAVCSVGEPVYIITELMEKGSLL-------AFLRSPEGQVLPVASLIDMACQ 112
Query: 241 VVEACHSL---GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V E L +HRDL N L E+ K DFGL+
Sbjct: 113 VAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLA 151
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 36.3 bits (85), Expect = 8e-04
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQF 447
AF FDKDG G I+ +E + ++
Sbjct: 5 AFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 9e-04
Identities = 43/150 (28%), Positives = 60/150 (40%), Gaps = 8/150 (5%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQI 194
+G G+FG K K +I K TE+ D E IM HPN+I +
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHL 70
Query: 195 VGAYEDAVAVHVVMELCAGGEL--FDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMH 252
G + V ++ E G L F R G +T + + R I ++ + +H
Sbjct: 71 EGVVTKSRPVMIITEFMENGALDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVH 129
Query: 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
RDL N L +N K DFGLS F
Sbjct: 130 RDLAARNIL-VNSN--LVCKVSDFGLSRFL 156
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.001
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+S E+ A +++F+ +D + G +T + K L + + L + + + DIDN G +
Sbjct: 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK--SGLPQTLLAKIWNLADIDNDGEL 61
Query: 400 DYGEFIAAMLHLNK 413
D EF AM HL
Sbjct: 62 DKDEFALAM-HLIY 74
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 134 RKLGQGQFGTTFL-CVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
R LG+G FG L C + A T + A K++ ++ +++ ++EI I+ L H
Sbjct: 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTL--KRECGQQNTSGWKKEINILKTLY-HE 66
Query: 190 NVIQIVGAYEDA--VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC-- 245
N+++ G + + ++ME G L D Y + +L ++++ + C
Sbjct: 67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD-------YLPKHKLNLAQLLLFAQQICEG 119
Query: 246 ----HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS +HRDL N L N + +K DFGL+
Sbjct: 120 MAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLA 154
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 44/194 (22%)
Query: 127 KEMYSLGRKLGQGQFGTTF--------------LCVEKATQK-----------EFAC-KS 160
K+ + LG+KLG+G FG + ++KAT+ AC S
Sbjct: 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNS 190
Query: 161 IAKRKLTTEEDV-EDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM-----ELCAGG 214
A E V E ++ G + ++ + E V + +L G
Sbjct: 191 CADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGL 250
Query: 215 ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274
E ++IIQ + R I+ ++ HS G++HRD+KP+N +F + K I
Sbjct: 251 ERENKIIQT----------IMRQILFALDGLHSTGIVHRDVKPQNIIF--SEGSGSFKII 298
Query: 275 DFGLSMFFRPGLTF 288
D G + R G+ +
Sbjct: 299 DLGAAADLRVGINY 312
|
Length = 566 |
| >gnl|CDD|218977 pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/WaaP) family | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 8/108 (7%)
Query: 176 RREIRIMHHL--AGHPNVIQIVGAYEDAVAVH----VVMELCAGGELFDRIIQRGH-YTE 228
RE R++ L AG P V + V A V ++ E G + + + E
Sbjct: 59 FREFRLLRRLREAGVP-VPKPVAAGAVKVGGEYQADLLTERLEGAQDLVTWLAQWADPAE 117
Query: 229 RKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276
L R + ++ H GV H DL N L + + IDF
Sbjct: 118 ELRRALWRAVGRLIARMHRAGVNHTDLNAHNILLDTGEGGFKVWLIDF 165
|
These lipopolysaccharide kinases are related to protein kinases pfam00069. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of S. enterica. Length = 206 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMHHLAGH 188
LG+ LG+G FG +K +C+++A + L T + + + E++I+ H+ H
Sbjct: 11 LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH 70
Query: 189 PNVIQIVGA-YEDAVAVHVVMELCAGGEL 216
NV+ ++GA + + V++E C G L
Sbjct: 71 LNVVNLLGACTKPGGPLMVIVEYCKFGNL 99
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + +G+G +G ++ T ++ A K I D + REI+++ L HP
Sbjct: 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-NDVFEHVSDATRILREIKLLRLLR-HP 59
Query: 190 NVIQIVG-----AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR-------- 236
++++I + + ++VV EL +L H + DLT
Sbjct: 60 DIVEIKHIMLPPSRREFKDIYVVFEL-MESDL--------HQVIKANDDLTPEHHQFFLY 110
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ ++ H+ V HRDLKP+N L + LK DFGL+
Sbjct: 111 QLLRALKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLA 150
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 34.9 bits (82), Expect = 0.002
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
L+D+ R+ D + DG+I E ++
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKRLL 25
|
Length = 25 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMHHLAGH 188
LG+ LG+G FG K C+++A + L T + + E++I+ H+ H
Sbjct: 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 70
Query: 189 PNVIQIVGA-YEDAVAVHVVMELCAGGEL 216
NV+ ++GA + + V++E C G L
Sbjct: 71 LNVVNLLGACTKPGGPLMVIVEFCKFGNL 99
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 146 LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205
L ++ TQ+ F K + K + R I I H PN++ + +V
Sbjct: 11 LVMDTRTQQTFILKGLRK-----SSEYSRERLTI-IPH---CVPNMVCLHKYIVSEDSVF 61
Query: 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265
+V++ GG+L+ I + + E +V ++A H G++ RDL P N L ++
Sbjct: 62 LVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNIL-LDD 120
Query: 266 Q 266
+
Sbjct: 121 R 121
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.002
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 19/167 (11%)
Query: 133 GRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
G K+G+G +G + K +KE+A K I ++ REI ++ L HPN
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMS-----ACREIALLRELK-HPN 59
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ--RGHYTERKAADLTRIIVG-----VVE 243
VI + + V + II+ R +K L R +V +++
Sbjct: 60 VIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILD 119
Query: 244 ACHSLG---VMHRDLKPENFLFINQ-QEEAPLKTIDFGLSMFFRPGL 286
H L V+HRDLKP N L + + E +K D G + F L
Sbjct: 120 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 166
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 132 LGRKLGQGQFG-----TTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
LGR LG G FG T + + A K + ++E+ + + E++IM HL
Sbjct: 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEK--QALMSELKIMTHLG 98
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFD 218
H N++ ++GA + ++++ E C G+L +
Sbjct: 99 PHLNIVNLLGACTKSGPIYIITEYCFYGDLVN 130
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 14/72 (19%), Positives = 22/72 (30%)
Query: 28 PPEDRLPPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQP 87
+ P S S + + +S + + P P+ QS PPP +
Sbjct: 176 DADPASASPSDPPSSSPGVPSFPSPPEDPSSPSDSSLPPAPSSFQSDTPPPSPESPTNPS 235
Query: 88 PAPVPQQQQEQS 99
P P P
Sbjct: 236 PPPGPAAPPPPP 247
|
Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. Length = 315 |
| >gnl|CDD|237082 PRK12373, PRK12373, NADH dehydrogenase subunit E; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 19/112 (16%), Positives = 31/112 (27%), Gaps = 11/112 (9%)
Query: 19 VTAAVWRTRPPEDRLPPPPKNEPSDNTERS--LKAKDQSKASDTAPAPAPTPTPIQST-- 74
V P S + E + LK + + A AP P+ T
Sbjct: 228 VPLLAPWQGDAAPVPPSEAARPKSADAETNAALKTPATAPKAAAKNAKAPEAQPVSGTAA 287
Query: 75 --PPPPVKINNNRQPPAPVPQQQQ-----EQSKKPAHVKRISSAGLQVGSVL 119
P P P + + + +K IS G ++ + L
Sbjct: 288 AEPAPKEAAKAAAAAAKPALEDKPRPLGIARPGGADDLKLISGVGPKIEATL 339
|
Length = 400 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMH 183
++ LG+ LG G FG K+ +C ++A + L T + + + E++I+
Sbjct: 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILI 65
Query: 184 HLAGHPNVIQIVGAYEDAVA-VHVVMELCAGGEL 216
H+ H NV+ ++GA + V++E C G L
Sbjct: 66 HIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNL 99
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 234 LTRIIVGVVEACH----SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L +I V +V+A L V+HRD+KP N L IN+ + +K DFG+S
Sbjct: 105 LGKIAVSIVKALEYLHSKLSVIHRDVKPSNVL-INRNGQ--VKLCDFGIS 151
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 34 PPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQ 93
P P + + A Q A +A PA TP + PP V +N P V
Sbjct: 390 PQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVRP 449
Query: 94 QQQEQSKKPAHVKRISSAGLQV 115
Q ++ KK V ++SS G
Sbjct: 450 AQFKEEKKIP-VSKVSSLGPST 470
|
Length = 614 |
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 25/87 (28%), Positives = 27/87 (31%), Gaps = 4/87 (4%)
Query: 17 QSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPP 76
RPP RL P S +TE DQ + AP P P P PP
Sbjct: 2870 SPAAKPAAPARPPVRRLARPA---VSRSTESFALPPDQPERPPQPQAPPP-PQPQPQPPP 2925
Query: 77 PPVKINNNRQPPAPVPQQQQEQSKKPA 103
PP PP P P A
Sbjct: 2926 PPQPQPPPPPPPRPQPPLAPTTDPAGA 2952
|
Length = 3151 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.003
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 161 IAKRKLTTEEDVEDVR----REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGEL 216
I RKL E +R RE++++H P ++ GA+ + + ME GG L
Sbjct: 32 IMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGSL 90
Query: 217 FDRIIQRGHYTERKAADLTRIIVGVVEACHSL----GVMHRDLKPENFLFINQQEEAPLK 272
D++++ + L ++ + V+ L +MHRD+KP N L +N + E +K
Sbjct: 91 -DQVLKEAKRIPEEI--LGKVSIAVLRGLAYLREKHQIMHRDVKPSNIL-VNSRGE--IK 144
Query: 273 TIDFGLS 279
DFG+S
Sbjct: 145 LCDFGVS 151
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE-DVRREIRIMHHLAG--HPNV 191
++G G +GT + + + A KS+ R T E+ + RE+ ++ L HPN+
Sbjct: 7 EIGVGAYGTVYKARDPHSGHFVALKSV--RVQTNEDGLPLSTVREVALLKRLEAFDHPNI 64
Query: 192 IQIVGAYEDA----------VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
++++ + V HV +L D++ G E DL R +
Sbjct: 65 VRLMDVCATSRTDRETKVTLVFEHVDQDLRT---YLDKVPPPGLPAE-TIKDLMRQFLRG 120
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
++ H+ ++HRDLKPEN L + + +K DFGL+ +
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQ---VKLADFGLARIY 158
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.004
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 19/167 (11%)
Query: 133 GRKLGQGQFGTTFLCVEKATQ--KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
G K+G+G +G + K + +++A K I ++ REI ++ L HPN
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMS-----ACREIALLRELK-HPN 59
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ--RGHYTERKAADLTR-----IIVGVVE 243
VI + + V + II+ R +K L R ++ +++
Sbjct: 60 VISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 119
Query: 244 ACHSLG---VMHRDLKPENFLFINQ-QEEAPLKTIDFGLSMFFRPGL 286
H L V+HRDLKP N L + + E +K D G + F L
Sbjct: 120 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 166
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|235124 PRK03427, PRK03427, cell division protein ZipA; Provisional | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 19/79 (24%), Positives = 26/79 (32%), Gaps = 9/79 (11%)
Query: 26 TRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNR 85
+PPE ++PP P + + + Q P P Q P P
Sbjct: 106 QQPPEAQVPPQHAPRP---AQPAPQPVQQPAYQPQPEQPLQQPVSPQVAPAPQP------ 156
Query: 86 QPPAPVPQQQQEQSKKPAH 104
AP P QQ Q +P
Sbjct: 157 VHSAPQPAQQAFQPAEPVA 175
|
Length = 333 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 489 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.98 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.98 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.98 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.98 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.98 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.98 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.98 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.98 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.97 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.97 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.97 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.97 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.97 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.96 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.96 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.96 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.96 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.96 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.96 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.96 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.96 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.96 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.96 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.96 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.96 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.96 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.96 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.95 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.95 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.95 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.95 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.95 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.95 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.95 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.95 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.95 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.95 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.95 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.95 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.95 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.95 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.95 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.95 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.95 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.95 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.95 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.95 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.95 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.95 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.95 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.95 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.95 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.95 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.95 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.94 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.94 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.94 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.94 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.94 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.94 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.94 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.94 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.94 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.94 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.94 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.94 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.94 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.94 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.94 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.94 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.94 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.94 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.94 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.94 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.94 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.94 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.94 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.94 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.94 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.94 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.94 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.94 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.94 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.94 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.94 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.94 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.94 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.94 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.94 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.94 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.94 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.94 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.94 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.94 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.94 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.94 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.94 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.94 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.94 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.94 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.94 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.93 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.93 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.93 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.93 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.93 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.93 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.93 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.93 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.93 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.93 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.93 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.93 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.93 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.93 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.93 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.93 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.93 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.93 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.93 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.93 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.93 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.93 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.93 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.93 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.93 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.93 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.93 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.93 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.93 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.93 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.93 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.93 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.93 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.93 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.93 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.92 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.92 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.92 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.92 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.92 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.92 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.92 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.92 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.92 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.92 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.92 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.92 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.92 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.92 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.92 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.92 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.92 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.92 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.91 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.91 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.91 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.91 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.91 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.91 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.91 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.91 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.91 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.91 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.9 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.9 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.9 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.9 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.89 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.89 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.88 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.88 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.87 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.87 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.87 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.87 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.87 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.87 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.86 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.86 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.86 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.86 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.85 | |
| PTZ00183 | 158 | centrin; Provisional | 99.84 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.84 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.84 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.83 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.83 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.83 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.82 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.82 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.8 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.79 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.79 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.76 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.76 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.75 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.74 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.74 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.73 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.71 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.68 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.64 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.59 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.58 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.57 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.57 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.55 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.52 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.51 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.48 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.43 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.43 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.43 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.4 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.39 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.36 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.36 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.33 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.28 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.27 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.26 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.18 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.17 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.17 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.15 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 99.13 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.11 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.09 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.09 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 99.09 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 99.08 | |
| PTZ00183 | 158 | centrin; Provisional | 99.06 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 99.06 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.06 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 99.05 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.04 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.03 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 99.02 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 99.02 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.0 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 99.0 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.0 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.0 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.0 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.96 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 98.95 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 98.94 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.93 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.93 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.91 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.91 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.88 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.88 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 98.87 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.87 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.86 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.84 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 98.84 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.81 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.81 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.77 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.77 | |
| KOG0040 | 2399 | consensus Ca2+-binding actin-bundling protein (spe | 98.72 | |
| KOG2562 | 493 | consensus Protein phosphatase 2 regulatory subunit | 98.72 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.71 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 98.69 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.69 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 98.67 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=318.02 Aligned_cols=226 Identities=31% Similarity=0.453 Sum_probs=185.3
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH----HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE----EDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.++..... .....+.+|++||++| +|||||+++++|..
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFEV 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeeec
Confidence 356779999999999999999999999999999999988765431 1234568999999999 89999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+..||||||++||+|++.+..++.+.+...+.+++|++.|+.|||++||+||||||+|||+.++.++..+||+|||+|+
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887788999999999999
Q ss_pred ccCCCCceee------------------------------------eeeccCCCCcchhHH-HHHHHhcccccCCCCCCC
Q 040003 281 FFRPGLTFRV------------------------------------WLRLHFLFFQKQRQS-VLQTRLVRNLNEPGSLWP 323 (489)
Q Consensus 281 ~~~~~~~~~~------------------------------------~~~~~ypf~~~~~~~-~~~~i~~~~~~~~~~~~~ 323 (489)
+...+..+.. .|++.-||....... +.+.|+.|+|.|....|
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w- 406 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW- 406 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh-
Confidence 8754332211 233333666544333 66666777777766666
Q ss_pred CCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 324 DKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..++.+.++.+. .++-.|++.|.+.+|..
T Consensus 407 --------------~~Iseea~dlI~---~mL~VdP~~R~s~~eaL 435 (475)
T KOG0615|consen 407 --------------DRISEEALDLIN---WMLVVDPENRPSADEAL 435 (475)
T ss_pred --------------hhhhHHHHHHHH---HhhEeCcccCcCHHHHh
Confidence 235555555555 45788999999999864
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=326.99 Aligned_cols=236 Identities=28% Similarity=0.352 Sum_probs=200.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|..++.||+|||+.||.+++..+|+.||+|+|.++.+......+.+.+||+|.++| +|||||+++++|++..++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEE
Confidence 4599999999999999999999999999999999998888888999999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
+|+|..++|..++++++.++|.+++.+++||+.||.|||+++|||||||..|++| +++.+|||+|||||..+.....
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence 9999999999999989999999999999999999999999999999999999999 7888999999999999975432
Q ss_pred --eeeeeeccC-------------CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 288 --FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 288 --~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
++..++..| .-+-|+.+++++.++.|+++|......+...--+...+.++..++.+..+-|+
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~--- 250 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIR--- 250 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHH---
Confidence 222333333 44456778999999999988876532221111223345556677777777776
Q ss_pred hhhcCCCCCCccHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKK 370 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~ 370 (489)
+.++.|+.-|++++++..
T Consensus 251 ~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 251 KLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHhcCCcccCCCHHHHhc
Confidence 558999999999999753
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=310.84 Aligned_cols=161 Identities=35% Similarity=0.599 Sum_probs=147.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
....|.+.++||+|+||+||+|+++.++..||||.|.++++ ....++.+..||.||+.| +|||||++++++.+.+.+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeEE
Confidence 34569999999999999999999999999999999988765 566778899999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC---CCeEEEeecccccc
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE---APLKTIDFGLSMFF 282 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~---~~~kl~DFGla~~~ 282 (489)
||||||.||+|.+++..++.+++..++.++.||+.||++||+++||||||||.||||...... ..+||+|||+|+.+
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999764223 67999999999999
Q ss_pred CCCCce
Q 040003 283 RPGLTF 288 (489)
Q Consensus 283 ~~~~~~ 288 (489)
.++...
T Consensus 166 ~~~~~a 171 (429)
T KOG0595|consen 166 QPGSMA 171 (429)
T ss_pred CchhHH
Confidence 866543
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=305.76 Aligned_cols=154 Identities=35% Similarity=0.610 Sum_probs=146.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.+|..++.||+|+|++|++|+++.+++.||||++.++.+..+..+.-+.+|-.+|.+|.+||.||+||..|+|...+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 35999999999999999999999999999999999888777777788899999999998999999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||+++|+|.++|.+.|.|++..++.++.+|+.||+|||++|||||||||+|||| +.++++||+|||.|+.+.+
T Consensus 153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCCh
Confidence 9999999999999999999999999999999999999999999999999999999 8899999999999998754
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=290.31 Aligned_cols=187 Identities=22% Similarity=0.378 Sum_probs=160.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.+.++|+|+||+||+|+++.||+.||||++.... .++.-.+-.+|||++|++| +|+|+|.+++.|.....++||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEEE
Confidence 45888999999999999999999999999999986432 2344445578999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC-CC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR-PG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~-~~ 285 (489)
+|||+.. +.+.|.+ ...++...+..++.|++.|+.|||++++|||||||+|||+ ...+.+||||||+|+.+. ++
T Consensus 80 FE~~dhT-vL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 80 FEYCDHT-VLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eeecchH-HHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCCc
Confidence 9999874 4455544 3568999999999999999999999999999999999999 778899999999999998 77
Q ss_pred Cceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 286 LTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 286 ~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.++. +.+++| |.+.+..+|++.+++.|+.-+|++
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~ 205 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR 205 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc
Confidence 76665 444444 667777899999999999888864
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=299.53 Aligned_cols=193 Identities=36% Similarity=0.549 Sum_probs=167.5
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.+.+|++.+.||+|+||+|-+|+....|+.||||.|++.++.+++++-.+++||+||..| +||||+.+|+.|+..+.
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDK 127 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCce
Confidence 35566799999999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+.|||||..+|.|+||+.+++.+++.+++.+++||+.|+.|||.++|+|||||.+|||| |.++++||+||||+..|.
T Consensus 128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 888999999999999887
Q ss_pred CCCceee-----------eeeccCCCCc-----chhHHHHHHHhcccccCCCCC
Q 040003 284 PGLTFRV-----------WLRLHFLFFQ-----KQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 284 ~~~~~~~-----------~~~~~ypf~~-----~~~~~~~~~i~~~~~~~~~~~ 321 (489)
.+..+.. +..+ -||.| ++.+.+++.++.|..+|++.+
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG-~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D 257 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNG-TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD 257 (668)
T ss_pred cccHHHHhcCCcccCCccccCC-CCCCCCccchhhHHHHHHHHhhcccccCCch
Confidence 6654332 1111 13332 344555566666666665543
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=293.34 Aligned_cols=188 Identities=26% Similarity=0.397 Sum_probs=168.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+++++||+|+||+||.++.+.|++.||+|+++++.+....+......|..||.++ +||.||.++..|++...+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEE
Confidence 4599999999999999999999999999999999999888888889999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC-
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL- 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~- 286 (489)
+||+.||+|+.+|.+.+.+++..++.++..|+.||.|||++|||||||||+|||| +.+|+++|+|||||+......
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999 889999999999999665432
Q ss_pred -ceeeeeeccC---------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 287 -TFRVWLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 287 -~~~~~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+.+..++..| .|| +.+.++++++.|..+|..+.
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWW--sLGillYeML~G~pPF~~~~ 229 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWW--SLGILLYEMLTGKPPFYAED 229 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchH--hHHHHHHHHhhCCCCCcCcc
Confidence 2222333333 454 44888899999988887654
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=298.47 Aligned_cols=188 Identities=24% Similarity=0.369 Sum_probs=159.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.+.|+.+++||+|+||.||+|++..+|+.||+|+++.... .+....-..|||.||++| +|||||+|.+...+. ..+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCceE
Confidence 4569999999999999999999999999999999986543 234456678999999999 899999999988776 789
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+|||++ +|.-++... -+|++.++.++++||+.||+|||.+||+|||||.+|||| +.+|.+||+|||||+++.
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeecc
Confidence 999999987 787777653 379999999999999999999999999999999999999 888999999999999887
Q ss_pred CCCc--ee-eeeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLT--FR-VWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~--~~-~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... ++ .|.+.+| -.+.++-+||+.+++.|++-+++.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~ 323 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR 323 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc
Confidence 6542 22 2555555 334456699999999998888763
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=283.94 Aligned_cols=224 Identities=30% Similarity=0.543 Sum_probs=195.7
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++.+.||+|.|+.||++.+..+|+.+|+|+|..+++... ..+.+.+|++|.+.| +|||||++.+.+...+..
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-QHPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhc-CCCcEeehhhhhccccee
Confidence 355779999999999999999999999999999999987766544 778999999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+|+|.|++|..-+..+--++|..+..+++||+.+|.|||.+||||||+||+|+||...+....+||+|||+|..+..
T Consensus 86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 99999999999998888887899999999999999999999999999999999999999888888999999999998875
Q ss_pred CCceee---------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCC
Q 040003 285 GLTFRV---------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPI 331 (489)
Q Consensus 285 ~~~~~~---------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 331 (489)
+..... +|.+.-|||+.+...+++.|+.|.|++++..|+.
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~------- 238 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDT------- 238 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCc-------
Confidence 543322 1233339999999999999999999999999965
Q ss_pred cchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHH
Q 040003 332 GDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEEL 368 (489)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el 368 (489)
++++....++ +++..|+..+|+..|-
T Consensus 239 --------is~~Ak~Lvr---rML~~dP~kRIta~EA 264 (355)
T KOG0033|consen 239 --------VTPEAKSLIR---RMLTVNPKKRITADEA 264 (355)
T ss_pred --------CCHHHHHHHH---HHhccChhhhccHHHH
Confidence 4455444555 4578899999999873
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=275.11 Aligned_cols=233 Identities=24% Similarity=0.368 Sum_probs=183.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.+|...++||+|.||+||+|++..||+.||||+|+.....+.-. ....|||.+|+.+ +|+||+.++++|.....+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~-~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGIN-RTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCcc-HHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEE
Confidence 35888999999999999999999999999999998765443323 3567899999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
+|||+. +|...++.. ..++..++..|+.+++.||+|||++.|+||||||.|+|+ +.+|.+||+|||+|+.+.+..
T Consensus 80 fEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCC
Confidence 999964 898888665 358999999999999999999999999999999999999 778999999999999997544
Q ss_pred cee--eeeeccC--------------CCCcchhHHHHHHHhcccccCCC-------------------CCCCCCCCCC--
Q 040003 287 TFR--VWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPG-------------------SLWPDKVAVP-- 329 (489)
Q Consensus 287 ~~~--~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~-------------------~~~~~~~~~~-- 329 (489)
... .+.+++| ..+.++.+||+.+++.+.+-||+ +.||+-..+.
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 322 2555555 44556779999999999888886 3555543221
Q ss_pred -------CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 330 -------PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 330 -------~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+.....+....+.+.++-+. +++..|+..+|+..|..
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~---~m~~ynP~~Rita~qaL 279 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLS---KMLTYNPKKRITASQAL 279 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHH---hhhccCchhcccHHHHh
Confidence 11112122233444454444 45677888899888864
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=279.45 Aligned_cols=189 Identities=28% Similarity=0.487 Sum_probs=170.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.++.||.|+||+|.+++++.+|..||+|++.+..+..-.+.+...+|..+|+.+ .||+++++++.|.+..++|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEEEE
Confidence 4599999999999999999999999999999999998888888889999999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||++||.|+.++++.+++++..++.++.+|+.||+|||+++||+|||||+|||| |.+|.+||+|||+|+..... +
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r-T 198 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR-T 198 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc-E
Confidence 9999999999999999999999999999999999999999999999999999999 88999999999999988654 5
Q ss_pred eeeeeeccC--------------------------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 288 FRVWLRLHF--------------------------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 288 ~~~~~~~~y--------------------------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
++..++..| ||.+.+...++..|+.|++.||...
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f 264 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF 264 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc
Confidence 544222222 7777777777888888888887654
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=280.74 Aligned_cols=233 Identities=21% Similarity=0.230 Sum_probs=182.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 207 (489)
..+.+..||+|..|+||+|+|+.|++.+|+|+|.. ..++...+++.+|++|++++ +||+||.+||+|...+ .++|+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEee
Confidence 46667899999999999999999999999999943 24567778999999999999 8999999999999999 59999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.||+|.+.+...++++|.....++.++++||.|||+ ++||||||||+|||+ +..|.|||||||.++.+....
T Consensus 157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS~ 233 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNSI 233 (364)
T ss_pred hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhhh
Confidence 9999999999999988999999999999999999999995 999999999999999 678899999999999987765
Q ss_pred ceeeeeeccC-------------CCCcchhHHHHHHHhcccccCCCC--CCCCCCC-CCCCc---chhhhh-hccHHHHH
Q 040003 287 TFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS--LWPDKVA-VPPIG---DRVIAE-SLSEEEIA 346 (489)
Q Consensus 287 ~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~-~~~~~---~~~~~~-~~~~~~~~ 346 (489)
..+.+++..| .-+-|+.+..+-++..|+|+++.. .|.+... +..++ -...+. .++++-..
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~ 313 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRS 313 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence 5555555555 122245577778888888888764 2221110 00000 001111 24444333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+. .|+.+|++.|-+..||..
T Consensus 314 FV~---~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 314 FVS---CCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHH---HHhcCCcccCCCHHHHhc
Confidence 333 567888888888888753
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=296.08 Aligned_cols=229 Identities=45% Similarity=0.761 Sum_probs=195.5
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
...+.+.|++.+.||+|.||+||+|+++.+|+.+|+|++.+.........+.+.+|++||++|..|||||.+++.|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 34556779999999999999999999999999999999998887766677899999999999966999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFGla~~ 281 (489)
.+|+|||+|.||.|++.+... .+++..+..+++|++.++.|||+.||+||||||+|+|+..... .+.+|++|||+|.+
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999999999999999887 4999999999999999999999999999999999999976544 45899999999999
Q ss_pred cCCCCceee---------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCC
Q 040003 282 FRPGLTFRV---------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAV 328 (489)
Q Consensus 282 ~~~~~~~~~---------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 328 (489)
+..+..+.. ++.+.-|||+.+...++..|+.|++.|+...|+..
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~i--- 265 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDI--- 265 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcccc---
Confidence 987544433 12222299999999999999999999999999763
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+..-.+-++ .++..|+..|++..+..+
T Consensus 266 ------------s~~akd~i~---~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 266 ------------SESAKDFIR---KLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ------------CHHHHHHHH---HhcccCcccCCCHHHHhc
Confidence 222222233 446778888998888654
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=295.60 Aligned_cols=236 Identities=24% Similarity=0.359 Sum_probs=185.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AV 204 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~ 204 (489)
+.++|.++++||.|+||.||+|+.+.++..||||.++++.. .-++... +||+..|++|..|||||++.+.+.+.+ .+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 34679999999999999999999999999999999976543 3333333 589999999944999999999999888 99
Q ss_pred EEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||+. +|+++++.++ .|++..++.|+.||++||+|+|.+|+.||||||+|||+ .....|||+|||+||.+.
T Consensus 86 ~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi---~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI---SGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe---cccceeEecccccccccc
Confidence 999999965 9999998764 59999999999999999999999999999999999999 446679999999999998
Q ss_pred CCCceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCC-------------------CCCCCCC--
Q 040003 284 PGLTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS-------------------LWPDKVA-- 327 (489)
Q Consensus 284 ~~~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~~~~-- 327 (489)
...-++. |.+++| |.+.+..+|++.+|..-+.-||+. .|+....
T Consensus 162 SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La 241 (538)
T KOG0661|consen 162 SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA 241 (538)
T ss_pred cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence 7666655 444444 777777899999999888888863 2322110
Q ss_pred ---------CCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 328 ---------VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 328 ---------~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+......+..+.+.+-+.-+. +++-.|++.|.++.+..+
T Consensus 242 ~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~---~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 242 SAMNFRFPQVKPSPLKDLLPNASSEAASLIE---RLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHhccCCCcCCCCChHHhCcccCHHHHHHHH---HHhcCCCccCccHHHHhc
Confidence 0111111122224444444444 567788899999998754
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=299.44 Aligned_cols=236 Identities=31% Similarity=0.444 Sum_probs=192.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.-|++++.||.|+-|.|-+|++..||+.+|||+|.+...........+.+||.||+-| .||||+++|+.|++..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEEEE
Confidence 3499999999999999999999999999999999887444455567889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
+||++||.|++++..+|.+++.+++.+++||+.|+.|||..+|+||||||+|+|| +..++|||+|||+|..-.++.-
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCcc
Confidence 9999999999999999999999999999999999999999999999999999999 7777899999999998776654
Q ss_pred eee-eeeccC---------CCCc-----chhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 288 FRV-WLRLHF---------LFFQ-----KQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 288 ~~~-~~~~~y---------pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
+.. .+..+| ||+| |+=+.|+..++.|.++|.++.-...-.--+.+..-++..++.+..+.|+
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr--- 244 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLR--- 244 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHH---
Confidence 433 233333 3333 2336788888888888875432100000112223445667777777776
Q ss_pred hhhcCCCCCCccHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKK 370 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~ 370 (489)
+++|+|+..+|+.+|+..
T Consensus 245 ~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 245 RMLDVDPSTRITTEEILK 262 (786)
T ss_pred HHhccCccccccHHHHhh
Confidence 668999999999999865
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=293.01 Aligned_cols=237 Identities=33% Similarity=0.486 Sum_probs=183.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH--HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE--EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...|.+++.||+|+||+|++|++..+++.||+|++.++..... ...+.+.+|+.+++.+..||||+++++++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 3469999999999999999999999999999998876533211 34456779999999994499999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~DFGla~~~~ 283 (489)
|+|||||.||+|++++...+++.|..++.+++|++.|++|||++||+||||||+|||+ +.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---d~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---DGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---cCCCCCEEEeccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999 555 899999999999883
Q ss_pred -CCCceee-----------eeec-c-C---CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhc-cHHHH
Q 040003 284 -PGLTFRV-----------WLRL-H-F---LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESL-SEEEI 345 (489)
Q Consensus 284 -~~~~~~~-----------~~~~-~-y---pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 345 (489)
.+..... ++.+ . | +-+-++-+.++..++.|.++|.+..-+............++..+ +.+-.
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~ 252 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEAR 252 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHH
Confidence 3332222 2222 2 3 22234557788888888888876321110000011122233344 55555
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..++ ++++.|+..++++.|+.
T Consensus 253 ~Li~---~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 253 SLIE---KMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHH---HHcCCCcccCCCHHHHh
Confidence 5555 56889999999999986
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=273.60 Aligned_cols=187 Identities=21% Similarity=0.286 Sum_probs=157.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 205 (489)
+.|+.+.+|++|+||.||+|+++.|++.||+|+++...-.. ..--.-+|||.+|.++ +|||||.+-++... -+.+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILLKA-RHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccceee
Confidence 45999999999999999999999999999999997654221 1122456899999999 79999999888754 45799
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||||+. +|..++...+ +|...+++.++.|++.|++|||.+.|+|||||++|+|+ ...|.+||+|||||+.+..
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREYGS 229 (419)
T ss_pred eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhhhcC
Confidence 99999976 8888776654 89999999999999999999999999999999999999 6788999999999999976
Q ss_pred CCc-eee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 285 GLT-FRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~-~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ++. +.+.+| +.+.++.+||+.+++.+++-|++.
T Consensus 230 p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~ 281 (419)
T KOG0663|consen 230 PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK 281 (419)
T ss_pred CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence 632 222 444444 788888999999999999999875
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=277.99 Aligned_cols=219 Identities=29% Similarity=0.458 Sum_probs=170.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----------HHHHHHHHHHHHHHHhcCCCCeeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----------EDVEDVRREIRIMHHLAGHPNVIQIVG 196 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----------~~~~~~~~E~~~l~~l~~hpniv~~~~ 196 (489)
+.|++++.||+|.||+|-+|++..+++.||||++.+..+... ...+++++||.||++| .|||||+|++
T Consensus 97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~LiE 175 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKLIE 175 (576)
T ss_pred hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEEEE
Confidence 469999999999999999999999999999999987544221 1246889999999999 8999999999
Q ss_pred EEEe--CCeEEEEEeecCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 197 AYED--AVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 197 ~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
+..+ ...+|||+|||..|.+... -..+. +.+.+++.+++.++.||+|||.+|||||||||+|+|| +.++++||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~-p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWC-PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccC-CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCCcEEe
Confidence 9876 4689999999999887432 22234 8899999999999999999999999999999999999 77799999
Q ss_pred EeeccccccCCCCceee-------------------------------------------eeeccCCCCcchhHHHHHHH
Q 040003 274 IDFGLSMFFRPGLTFRV-------------------------------------------WLRLHFLFFQKQRQSVLQTR 310 (489)
Q Consensus 274 ~DFGla~~~~~~~~~~~-------------------------------------------~~~~~ypf~~~~~~~~~~~i 310 (489)
+|||.+..+..+..... ++-+.+||.+....+++..|
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 99999987743321110 22344477777666777777
Q ss_pred hcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHH
Q 040003 311 LVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKG 371 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~ 371 (489)
+...+.||... .+.++-.+.|. +++++|+..+|++.+++.-
T Consensus 332 vn~pL~fP~~p-----------------e~~e~~kDli~---~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 332 VNDPLEFPENP-----------------EINEDLKDLIK---RLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred hcCcccCCCcc-----------------cccHHHHHHHH---HHhhcChhheeehhhheec
Confidence 76666666431 12222233333 5688999999999998753
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=286.18 Aligned_cols=152 Identities=29% Similarity=0.446 Sum_probs=143.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.++++||+|+||+|++|..+.+++.||||++++..+-..++++..+.|.+|+....+||.+++++.+|+...++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 56999999999999999999999999999999999998888899999999999999997899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.||++. ++...+.+++..++.++..|+.||+|||++||||||||.+|||| |.+|++||+|||+++.-.
T Consensus 448 mey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 448 MEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccC
Confidence 9999999954 34555789999999999999999999999999999999999999 899999999999998654
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=273.70 Aligned_cols=158 Identities=29% Similarity=0.492 Sum_probs=140.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEE-EEEeCCe-EE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVG-AYEDAVA-VH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~-~~ 205 (489)
..|++.++||+|+||+||++.+..+|+.+|.|.|.-. .-+....+.+..|+.+|++| +|||||++++ .|.+... ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhH
Confidence 4599999999999999999999999999999999743 34567788899999999999 8999999998 5655555 99
Q ss_pred EEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 206 VVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHS--LG--VMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~--~~--iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
||||||.+|+|...++. +..+++..++.++.|++.||..||+ .+ |+||||||+||+| +..|.+||+|||
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfG 173 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDFG 173 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccch
Confidence 99999999999998864 3569999999999999999999999 55 9999999999999 788999999999
Q ss_pred cccccCCCCceee
Q 040003 278 LSMFFRPGLTFRV 290 (489)
Q Consensus 278 la~~~~~~~~~~~ 290 (489)
|++++....++..
T Consensus 174 L~r~l~s~~tfA~ 186 (375)
T KOG0591|consen 174 LGRFLSSKTTFAH 186 (375)
T ss_pred hHhHhcchhHHHH
Confidence 9999987666543
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=284.05 Aligned_cols=152 Identities=30% Similarity=0.492 Sum_probs=145.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|+++++||+|+||.||+|+.+.||..||+|++++.......+++.++.|-.||... ++|+||+||..|++..++||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEE
Confidence 46799999999999999999999999999999999998888888889999999999996 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||++||++..+|.+.+.+++..++.++.+++.|++.+|.+|+|||||||+|+|| |..|++||+|||||.-+
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999 89999999999999643
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=264.31 Aligned_cols=221 Identities=29% Similarity=0.455 Sum_probs=187.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC-----CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL-----TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~-----~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
-+.|.-.+.||+|..++|.+|.++.+|+.+|+|+|..... ...+-++.-++|+.||+++.+||+|+.+.++|+..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3458888899999999999999999999999999864321 12334566789999999999999999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..+++|+|+|+.|.|+|+|...-.+++...+.+++|++.|++|||.++||||||||+|||+ +++.++||+|||+|..
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFACQ 172 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceeec
Confidence 9999999999999999999988889999999999999999999999999999999999999 7788999999999999
Q ss_pred cCCCCceee---------------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 282 FRPGLTFRV---------------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 282 ~~~~~~~~~---------------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
+.+|..++. +|.|.-|||..-.-..+..|+.|+|.|.+..|
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW 252 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW 252 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch
Confidence 988876544 12222299999888888999999999999999
Q ss_pred CCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHH
Q 040003 323 PDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEEL 368 (489)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el 368 (489)
.+. +.+..+.+. +++-.|+..+|+.+|.
T Consensus 253 adi---------------s~~~KdLIs---rlLqVdp~~Ritake~ 280 (411)
T KOG0599|consen 253 ADI---------------SATVKDLIS---RLLQVDPTKRITAKEA 280 (411)
T ss_pred hhc---------------cccHHHHHH---HHHeeCchhcccHHHH
Confidence 663 222222232 3466788889999884
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=261.54 Aligned_cols=221 Identities=32% Similarity=0.541 Sum_probs=178.8
Q ss_pred cCcccceeec-ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--
Q 040003 124 GNLKEMYSLG-RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-- 200 (489)
Q Consensus 124 ~~~~~~y~~~-~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 200 (489)
..+.+.|.+. ++||-|-.|.|..|.++.|++.+|+|++.- ....++|+++.-..+.|||||.+++.|+.
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~ 128 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--------SPKARREVELHWMASGHPHIVSIIDVYENSY 128 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--------CHHHHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence 3455668775 679999999999999999999999998842 25667899887777789999999998854
Q ss_pred --CCeEEEEEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 201 --AVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 201 --~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
...+.||||+|+||.|+..+..++. |+|.++..|++||..|+.|||+.+|.||||||+|+|..+...+..+||+||
T Consensus 129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccc
Confidence 5678899999999999999998876 999999999999999999999999999999999999998888999999999
Q ss_pred ccccccCCCCceee--------------------------------eeeccC-CCCcchh----HHHHHHHhcccccCCC
Q 040003 277 GLSMFFRPGLTFRV--------------------------------WLRLHF-LFFQKQR----QSVLQTRLVRNLNEPG 319 (489)
Q Consensus 277 Gla~~~~~~~~~~~--------------------------------~~~~~y-pf~~~~~----~~~~~~i~~~~~~~~~ 319 (489)
|+|+.-.....+.. ++-.+| ||+...- -..-.+|..|.|.||.
T Consensus 209 GFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~ 288 (400)
T KOG0604|consen 209 GFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPE 288 (400)
T ss_pred ccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCC
Confidence 99986542221111 233334 6765422 2456788889999999
Q ss_pred CCCCCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 320 SLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.|. +++++..+.++. .+-.++..+++++|+..
T Consensus 289 pEWs---------------~VSe~aKdlIR~---LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 289 PEWS---------------CVSEAAKDLIRK---LLKTEPTERLTIEEVMD 321 (400)
T ss_pred hhHh---------------HHHHHHHHHHHH---HhcCCchhheeHHHhhc
Confidence 9884 456666666663 46789999999999864
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=255.72 Aligned_cols=159 Identities=31% Similarity=0.570 Sum_probs=144.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++++.||+|.||.||+|+.+.++-.||+|++-+..+.......++++|++|-+.| +||||.++|++|.+....||+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeEEE
Confidence 5699999999999999999999999999999999887766555567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRII--QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||..+|+|+..|. ..+++++..+..++.|++.||.|||.++||||||||+|+|+ +..+.+||+|||-+..-..+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSN 177 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCceeecCCC
Confidence 99999999999998 55679999999999999999999999999999999999999 77788999999999877655
Q ss_pred Cceee
Q 040003 286 LTFRV 290 (489)
Q Consensus 286 ~~~~~ 290 (489)
...+.
T Consensus 178 kR~tl 182 (281)
T KOG0580|consen 178 KRKTL 182 (281)
T ss_pred Cceee
Confidence 44433
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=264.02 Aligned_cols=203 Identities=26% Similarity=0.351 Sum_probs=167.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCC-eeEEEEEEEeCC----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN-VIQIVGAYEDAV---- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~---- 202 (489)
..|..+++||+|+||+||+|+.+.+|+.||+|+++..... +..-....+|+.+|+.| +|+| ||.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecccccc
Confidence 3488888999999999999999999999999999765321 11224567999999999 7999 999999998877
Q ss_pred --eEEEEEeecCCCchHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 --AVHVVMELCAGGELFDRIIQRG----HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.+++|+||+. .+|..++.... .++...++.+++||+.||.|||++||+||||||.|||+ +..|.+||+||
T Consensus 89 ~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeeecc
Confidence 8999999995 59999987654 47778999999999999999999999999999999999 67899999999
Q ss_pred ccccccC-CCCceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhc
Q 040003 277 GLSMFFR-PGLTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESL 340 (489)
Q Consensus 277 Gla~~~~-~~~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (489)
|+|+.+. +...++. |.+..| +.+.++.+||+.++..++.-|+++.
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s------------------- 225 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS------------------- 225 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc-------------------
Confidence 9999887 3333332 555544 5666788999999999888888653
Q ss_pred cHHHHHHHHHHHhhhcCC
Q 040003 341 SEEEIAGLKEMFKMIDTD 358 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d 358 (489)
+.+++..+|+.+..-
T Consensus 226 ---e~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 226 ---EIDQLFRIFRLLGTP 240 (323)
T ss_pred ---HHHHHHHHHHHcCCC
Confidence 266677777777554
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=277.32 Aligned_cols=231 Identities=24% Similarity=0.357 Sum_probs=180.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+.+.||+|+||+||+|+.+.+.+.||||.+.+.. ..+.++..+++|++|+++| +|||||.++++|+...++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g-r~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG-RNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC-CchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEEE
Confidence 45888999999999999999999999999999998765 4567788999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
.|||.| +|+.+|...+.++|..++.+..+++.||.|||+++|+|||+||.|||| +..+.+|+||||+|+....+..
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce
Confidence 999987 999999999999999999999999999999999999999999999999 8889999999999998876544
Q ss_pred eeeeeec--cC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHH
Q 040003 288 FRVWLRL--HF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 288 ~~~~~~~--~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
...-..| -| ||.. ++.+|+++++..|+++|-........ .++..... +...+..-+..+.
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~--p~~~S~~f~nfl~- 232 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKP--PSTASSSFVNFLQ- 232 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCC--cccccHHHHHHHH-
Confidence 3221111 12 4433 45688999999888887543211100 00000000 0123333333333
Q ss_pred HHhhhcCCCCCCccHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~ 369 (489)
..+..|+..+|+..+|.
T Consensus 233 --gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 233 --GLLIKDPAQRLTWTDLL 249 (808)
T ss_pred --HHhhcChhhcccHHHHh
Confidence 34567777888887764
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=261.96 Aligned_cols=192 Identities=25% Similarity=0.367 Sum_probs=161.9
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED---- 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 200 (489)
.....|...+.||+|+||.|+.|.++.+|+.||||++.. .+...-..++..||+.+|+++ +|+|||.+++.+..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRD 96 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHh-cCCCcceEEeeccccccc
Confidence 344557778999999999999999999999999999863 345566778899999999999 79999999998855
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
-..+|+|+|+| +.+|...++....+++..+..++.||+.||+|+|+.+|+||||||+|+|+ +.++.+||||||+|
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLA 172 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccccce
Confidence 45799999999 56888887776669999999999999999999999999999999999999 77888999999999
Q ss_pred cccCC---CCc-eeeeeeccC--------------CCCcchhHHHHHHHhcccccCCCCCC
Q 040003 280 MFFRP---GLT-FRVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 280 ~~~~~---~~~-~~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
+.... ... ...+.+++| -.+.++.+||+.+++.|+.-||+...
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~ 233 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY 233 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch
Confidence 99863 222 222555665 33456679999999999999998653
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=266.97 Aligned_cols=186 Identities=26% Similarity=0.424 Sum_probs=154.9
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.++....|....+||+|+.|.||.|+...+++.||||.+..+... ..+-+.+|+.+|+.+ +|+|||.+++.|...+
T Consensus 268 ~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~d 343 (550)
T KOG0578|consen 268 QGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDL-HHPNIVNFLDSYLVGD 343 (550)
T ss_pred CCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhc-cchHHHHHHHHhcccc
Confidence 355667799999999999999999999999999999999876433 346788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|+|||||+||+|.|.+.. ..++|.+++.+++.+++||+|||.+||||||||.+|||+ +.++.+||+|||++..+
T Consensus 344 eLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi 419 (550)
T KOG0578|consen 344 ELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQI 419 (550)
T ss_pred eeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeecc
Confidence 99999999999999987654 469999999999999999999999999999999999999 77888999999999999
Q ss_pred CCCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 283 RPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 283 ~~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
......+..+. +.|||...+ .+.+..|.+..++|
T Consensus 420 ~~~~~KR~TmV-GTPYWMAPE-----Vvtrk~YG~KVDIW 453 (550)
T KOG0578|consen 420 SEEQSKRSTMV-GTPYWMAPE-----VVTRKPYGPKVDIW 453 (550)
T ss_pred ccccCcccccc-CCCCccchh-----hhhhcccCccccch
Confidence 87665443222 236666522 22334455555555
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=259.32 Aligned_cols=280 Identities=25% Similarity=0.349 Sum_probs=210.5
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+...|.+.+.||+|.|.+|-+|++..||..||||+|.+.++.. .....+.+|+++|+-+ +|||||+||+......
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLV-QHpNiVRLYEViDTQT 90 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLV-QHPNIVRLYEVIDTQT 90 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHh-cCcCeeeeeehhcccc
Confidence 4556677999999999999999999999999999999999877644 3445678899999998 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
.+|||+|+-.+|+|+++|.++ ..+.+..++.++.||+.|+.|||...||||||||+|+++. ..-|-|||.|||++..
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNK 168 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeecccccc
Confidence 999999999999999999876 4689999999999999999999999999999999999885 4568899999999999
Q ss_pred cCCCCceee------------eeeccC--C-CCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHH
Q 040003 282 FRPGLTFRV------------WLRLHF--L-FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 282 ~~~~~~~~~------------~~~~~y--p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (489)
|.+|..++. +|...| | .+.|+.+.|++.++.|+.+|....-.+.-..-...++.++..++.+-.+
T Consensus 169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrd 248 (864)
T KOG4717|consen 169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRD 248 (864)
T ss_pred CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHH
Confidence 999987665 333345 2 3335667888888888888864321111111112234555566666555
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH--HHHHhCC------------CCCHHHH---------------HHHHHccCCCCCc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK--GLQRVGA------------NLMDSEI---------------DGLMQAGDIDNSG 397 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~--~l~~lg~------------~~~~~~i---------------~~l~~~~D~d~~g 397 (489)
.|. .++-.|+..+-+++|+.. ||+.... .+.+++- +++++.++.|.-.
T Consensus 249 LI~---sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~iPLvsr~~L~ee~Ha~IIq~Mv~G~IAs~e~Il~aLe~n~YN 325 (864)
T KOG4717|consen 249 LIQ---SMLVRDPKKRASLEEIVSTSWLQAGDRGLSTAIPLVSRHHLPEEAHATIIQQMVAGAIASEEDILRALENNEYN 325 (864)
T ss_pred HHH---HHHhcCchhhccHHHHhccccccCCCCCccccCceeehhhCChHHHHHHHHHHhcccccCHHHHHHHHhccccc
Confidence 554 456677778888888752 4433211 1112111 3355566677777
Q ss_pred ceehHHHHHHHH
Q 040003 398 TMDYGEFIAAML 409 (489)
Q Consensus 398 ~I~f~eF~~~~~ 409 (489)
.|+-.-|+.+-.
T Consensus 326 hiTATYfLLAEr 337 (864)
T KOG4717|consen 326 HITATYFLLAER 337 (864)
T ss_pred hhhhHHHHHHHH
Confidence 777777765544
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=254.54 Aligned_cols=182 Identities=25% Similarity=0.337 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----Ce
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-----VA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~~ 203 (489)
.|.-.+++|.|+||.||+|....+++.||||.+-..+.. -.+|+++|+.+ +|||||++.-+|... -.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-------knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-------KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-------CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhH
Confidence 488889999999999999999999999999988544321 23799999998 899999999888543 24
Q ss_pred EEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 204 VHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|||||+. +|...++. +.+++...++-++.||+.||.|||+.||+||||||.|+|++ ...+.+||||||.|
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcc
Confidence 5689999975 89888874 46789999999999999999999999999999999999994 34589999999999
Q ss_pred cccCCCCceee-eeeccC--------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+.+..+..-.. +.++-| -.+-|+.+|++.+++.|.+-|+++.
T Consensus 174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s 230 (364)
T KOG0658|consen 174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS 230 (364)
T ss_pred eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC
Confidence 99977664333 333333 2334566999999999999999864
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=253.80 Aligned_cols=157 Identities=34% Similarity=0.588 Sum_probs=143.9
Q ss_pred ccCcccceee-cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 123 TGNLKEMYSL-GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 123 ~~~~~~~y~~-~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.+.+.|++ .+.||+|+|+.|--|....+|.+||||+|.+. ....+.++.||++++.++.+|+||++|+++|+++
T Consensus 72 ~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 72 SGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred cchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3456677877 46799999999999999999999999999875 3456788999999999999999999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..+|||||-|.||.|..+|.++..|++.++..+.+.|..||.|||.+||.||||||+|||-...+.-..||||||-|+.-
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999997777778899999988764
Q ss_pred c
Q 040003 282 F 282 (489)
Q Consensus 282 ~ 282 (489)
+
T Consensus 229 ~ 229 (463)
T KOG0607|consen 229 I 229 (463)
T ss_pred c
Confidence 4
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=260.65 Aligned_cols=232 Identities=28% Similarity=0.336 Sum_probs=168.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--eEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--AVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~~~l 206 (489)
.|..++.||+|+||+||++.+..+|..+|||.+.... ....+.+.+|+.+|++| +|||||+++|...... .++|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEe
Confidence 3778899999999999999999999999999987642 12267789999999999 5999999999855544 6999
Q ss_pred EEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFGla~~~~~ 284 (489)
.|||+.+|+|.+++.+.+ .+++..++.+.+||+.||.|||++|||||||||+|||+ +. ++.+||+|||+++....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl---~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL---DPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE---eCCCCeEEeccCcccccccc
Confidence 999999999999998877 79999999999999999999999999999999999999 55 58899999999987764
Q ss_pred CCce-e-eeeeccCCCCcc-----------------hhHHHHHHHhcccccCCCC-CCCCCC--CCCCCcchhhhhhccH
Q 040003 285 GLTF-R-VWLRLHFLFFQK-----------------QRQSVLQTRLVRNLNEPGS-LWPDKV--AVPPIGDRVIAESLSE 342 (489)
Q Consensus 285 ~~~~-~-~~~~~~ypf~~~-----------------~~~~~~~~i~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~ 342 (489)
.... . .....+.|+|.. +.+|++-+++.|+.++... .+.... .........++..++.
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSD 250 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCH
Confidence 1111 0 000111133332 3344444444443333321 100000 0001112244556666
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+-.+.++ ++|..|+..|.+++||..
T Consensus 251 ~a~~Fl~---~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 251 EAKDFLR---KCFKRDPEKRPTAEELLE 275 (313)
T ss_pred HHHHHHH---HHhhcCcccCcCHHHHhh
Confidence 7666666 456678888999988754
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=254.20 Aligned_cols=233 Identities=24% Similarity=0.339 Sum_probs=181.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||.|..++||+|++..++..||||++...+..+ ++..+++|+..|+.+ +||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEe
Confidence 45999999999999999999999999999999998776543 478999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.||.+|++.+.++.. ..+.|..+..++++++.||.|||.+|.||||||+.|||| +.+|.|||+|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeeccc
Confidence 9999999999998764 348999999999999999999999999999999999999 88999999999998877654
Q ss_pred Cceeeeee----ccCCCCcchhHHHHHHHhcccccCCCCCCCCCC----------CCCC-------------Ccchhhhh
Q 040003 286 LTFRVWLR----LHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV----------AVPP-------------IGDRVIAE 338 (489)
Q Consensus 286 ~~~~~~~~----~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~-------------~~~~~~~~ 338 (489)
. .+.+.. .+.|+|... +++..-+.| |+|..++|.... -..+ ..-.....
T Consensus 180 G-~R~~~rf~tfvgtp~wmAP--Evl~q~~~G-YdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~ 255 (516)
T KOG0582|consen 180 G-DRQVTRFNTFVGTPCWMAP--EVLMQQLHG-YDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTS 255 (516)
T ss_pred C-ceeeEeeccccCcccccCh--HHhhhcccC-ccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccc
Confidence 3 222222 223787763 443333444 888888884321 0000 00000011
Q ss_pred hccHHHHHHHHHHHh-----hhcCCCCCCccHHHHHH
Q 040003 339 SLSEEEIAGLKEMFK-----MIDTDNSGYITLEELKK 370 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~-----~~D~d~~g~i~~~el~~ 370 (489)
.+..++...+.+.|+ |++.|++.|.+.++|..
T Consensus 256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 334555555444443 67899999999999853
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=264.31 Aligned_cols=187 Identities=25% Similarity=0.373 Sum_probs=156.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+|+++ +||||+++++++.+.+.+|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEE
Confidence 4599999999999999999999999999999999765444445567789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCCcc
Confidence 9999999999999888889999999999999999999999999999999999999 6788999999999987644321
Q ss_pred eeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| .-+-++.++++.+++.|..+|..
T Consensus 174 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 174 -TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred -eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 11111111 11123447777788887777654
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=269.08 Aligned_cols=150 Identities=27% Similarity=0.469 Sum_probs=139.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.+ +||||+++++++.+...+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence 488999999999999999999999999999999876555556677899999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +..+.+||+|||+++.+
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGF 151 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccc
Confidence 999999999999888889999999999999999999999999999999999999 67789999999998644
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.9e-31 Score=261.75 Aligned_cols=181 Identities=22% Similarity=0.306 Sum_probs=147.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.+++||+|+||.||+|++..+++.||||++.... .......+.+|+++|+.+ +|+||+++++++.+.+.+|+|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEE
Confidence 34888899999999999999999999999999986432 344557789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.+|+|... ....+..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceecccccc
Confidence 999999998643 345677888999999999999999999999999999999 6778899999999987653321
Q ss_pred ee--eeeeccC------------------CCCcchhHHHHHHHhcccccCC
Q 040003 288 FR--VWLRLHF------------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 288 ~~--~~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.. .+.+..| .-+-++.+.++.+++.|+..|.
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 10 0111111 1122455888899999988876
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=268.05 Aligned_cols=188 Identities=24% Similarity=0.341 Sum_probs=162.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-----CCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-----PNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pniv~~~~~~~~~~~ 203 (489)
+|++.+.||+|+||.|.+|++..|++.||||+|+.++ ....+...|+.||..|.+| -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 6899999999999999999999999999999997543 4456667899999999534 389999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|||+|++ ..+|+++++.++ .++...++.+++||+.+|.+||++||||+|||||||||.+.. ...|||+|||.|.+
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFGSSCF 340 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEecccccc
Confidence 99999999 569999998763 588999999999999999999999999999999999998755 45899999999998
Q ss_pred cCCCCceee----------eeeccC--CCCcchhHHHHHHHhcccccCCCCCC
Q 040003 282 FRPGLTFRV----------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 282 ~~~~~~~~~----------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
......... +|...| +.+.|+.+||+.++..|.+-||++.-
T Consensus 341 ~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 341 ESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred cCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 776655221 455555 67788899999999999999998754
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-31 Score=260.79 Aligned_cols=145 Identities=31% Similarity=0.462 Sum_probs=133.5
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+++ +||||+++++++...+.+|||||||.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999865544455667788999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEG 145 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCccc
Confidence 9999999888889999999999999999999999999999999999999 67788999999999764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-31 Score=262.37 Aligned_cols=234 Identities=29% Similarity=0.425 Sum_probs=180.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|.+.+.||+|.|+.|.+|++..++..||||.|.+..+.. ..++.+.+|+++|+.| +|||||+++.+.+....+|+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEEE
Confidence 45999999999999999999999999999999998876554 3445589999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+|.+++++.+++++.+..++.++.|++.|++|||+++|||||||.+|||| +.+.++||+|||++.++..+..
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeeccccc
Confidence 9999999999999999999999999999999999999999999999999999999 8888899999999999986654
Q ss_pred eeee-eeccC---------CCC-----cchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 288 FRVW-LRLHF---------LFF-----QKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 288 ~~~~-~~~~y---------pf~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
...+ ....| .+. .++.+.+++.++.|.++|.+..-+....-....+.-+..-++.+-..-|+
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLr--- 287 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLR--- 287 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHH---
Confidence 4331 11222 111 12335667777777777776544332211111222333344444444444
Q ss_pred hhhcCCCCCCccHHHHH
Q 040003 353 KMIDTDNSGYITLEELK 369 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~ 369 (489)
+.+-.+++.+.+.+++.
T Consensus 288 k~lvl~Pskr~~~dqim 304 (596)
T KOG0586|consen 288 KFLVLNPSKRGPCDQIM 304 (596)
T ss_pred HhhccCccccCCHHHhh
Confidence 22445666666666654
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.4e-31 Score=266.34 Aligned_cols=150 Identities=29% Similarity=0.499 Sum_probs=138.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+||+|.+..+++.||||++.+...........+.+|+++|+.+ +|||||+++++|.+...+||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEE
Confidence 589999999999999999999999999999999765444445567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||+||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+|+.+
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~ 151 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGF 151 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeeccccccc
Confidence 999999999999888889999999999999999999999999999999999999 67788999999999754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-31 Score=259.84 Aligned_cols=236 Identities=25% Similarity=0.273 Sum_probs=176.9
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv~ 208 (489)
..+.+.||+|+||+||+|.++.+. .||+|++......... .+.|.+|+.+|.+| +|||||+++|++.+.. .++|||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~-~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDES-RKAFRREASLLSRL-RHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHH-HHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCceEEEE
Confidence 445567999999999999886442 2999999765544333 78999999999999 8999999999999887 799999
Q ss_pred eecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLG-VMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
|||++|+|.+++.. .+.++...+..++.+|+.|++|||+++ ||||||||+|||+ +.+. ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCccceeecc
Confidence 99999999999987 578999999999999999999999999 9999999999999 6675 999999999987764
Q ss_pred C-Ccee-e----------eeec-cCCCCcc----hhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchhhhhhccHHH
Q 040003 285 G-LTFR-V----------WLRL-HFLFFQK----QRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 285 ~-~~~~-~----------~~~~-~ypf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 344 (489)
. ...+ . ++++ .-+|..+ +.+.++.+++.|+.+|.+... ... .+.......++....+..
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p~~~~~~l 275 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPIPKECPPHL 275 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCCCccCCHHH
Confidence 3 1111 1 2332 1233332 346677888888888775542 111 011111222233333333
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...+. .+++.|+..+.+..|+...|..+
T Consensus 276 ~~l~~---~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 276 SSLME---RCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHHH---HhCCCCCCcCCCHHHHHHHHHHH
Confidence 33333 38999999999999998888765
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=266.00 Aligned_cols=151 Identities=26% Similarity=0.472 Sum_probs=139.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEEE
Confidence 589999999999999999999999999999999765444445567788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+||+|.+++...+.+++..++.++.|++.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCccccc
Confidence 999999999999888899999999999999999999999999999999999999 677899999999998653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=258.63 Aligned_cols=186 Identities=24% Similarity=0.324 Sum_probs=155.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+|+++ +||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEE
Confidence 489999999999999999999999999999999765443444566788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~~~- 156 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRTW- 156 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCCcc-
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999987654321
Q ss_pred eeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 289 RVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~ 200 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFD 200 (291)
T ss_pred cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11111111 12234557788888888777654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=264.98 Aligned_cols=150 Identities=26% Similarity=0.473 Sum_probs=137.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+++|+++ +||||+++++.|.+.+.+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence 499999999999999999999999999999999764433344556788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|..+
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~ 151 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGF 151 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 67889999999998643
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=251.46 Aligned_cols=151 Identities=30% Similarity=0.484 Sum_probs=141.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|.-|+||+|+.+.++..+|+|++.+..+.......++..|-+||+.+ +||.++.||..|+.....|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEE
Confidence 3589999999999999999999999999999999988877778888999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||.||+|..+.+++ +.+++..++.++..++.||+|||-+|||.|||||+|||| .++|+|-|+||-|+...
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRC 229 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccC
Confidence 9999999999887664 579999999999999999999999999999999999999 78999999999987643
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=259.73 Aligned_cols=187 Identities=25% Similarity=0.372 Sum_probs=153.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+.|++.+.||+|+||.||+|.+..++ ..||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+...+|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEE
Confidence 45999999999999999999876655 68999999765544455567788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||.+|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCCCc
Confidence 99999999999999888889999999999999999999999999999999999999 678899999999998764322
Q ss_pred ceeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| .-+-++.+.++.+++.|..+|..
T Consensus 186 -~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 186 -YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred -ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 111111111 11123446777777777776653
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=257.37 Aligned_cols=187 Identities=27% Similarity=0.323 Sum_probs=155.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|..+ +||||+++++++.+....||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEEE
Confidence 499999999999999999999999999999999865444444567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
|||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~~~~- 156 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVTYAN- 156 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCcccccccC-
Confidence 999999999999888889999999999999999999999999999999999999 6778899999999986643111
Q ss_pred eeeee-----------ccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 289 RVWLR-----------LHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 289 ~~~~~-----------~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..+.+ ..| .-+-++.++++.+++.|..+|...
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 00111 111 112234477788888887777543
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=254.16 Aligned_cols=194 Identities=27% Similarity=0.449 Sum_probs=165.0
Q ss_pred ccceee--cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 127 KEMYSL--GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 127 ~~~y~~--~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...|++ .+.||.|.||+||-|.++.+|+.||||+|.+.++....+ ..+++|+.||+.+ .||.||.+...|+..+.+
T Consensus 561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqe-sqlR~EVaILq~l-~HPGiV~le~M~ET~erv 638 (888)
T KOG4236|consen 561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQE-SQLRNEVAILQNL-HHPGIVNLECMFETPERV 638 (888)
T ss_pred HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchH-HHHHHHHHHHHhc-CCCCeeEEEEeecCCceE
Confidence 344665 478999999999999999999999999999887765444 7899999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 205 HVVMELCAGGELFDRII--QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
++|||-+.| +..+.+. +.+++++.....++.||+.||.|||.++|+|.||||+||||.+.+.--.+||||||+|+++
T Consensus 639 FVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI 717 (888)
T KOG4236|consen 639 FVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII 717 (888)
T ss_pred EEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence 999999954 6656553 4589999999999999999999999999999999999999988777788999999999987
Q ss_pred CCCCcee---------------------------------eeeeccCCCCcchhHHHHHHHhcccccCCCCCCCCC
Q 040003 283 RPGLTFR---------------------------------VWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDK 325 (489)
Q Consensus 283 ~~~~~~~---------------------------------~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 325 (489)
....... +.|++.|||.-. +.|-..|.+..+-||...|.+.
T Consensus 718 gEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 718 GEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEI 791 (888)
T ss_pred chhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhc
Confidence 5422111 135677798655 6778889999999999999663
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=258.32 Aligned_cols=182 Identities=24% Similarity=0.316 Sum_probs=149.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+++|+.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999865544455667888999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee--ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR--VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~--~~ 291 (489)
|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......... ..
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccccccccc
Confidence 9999999888889999999999999999999999999999999999999 677889999999997643221111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~ 197 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCC
Confidence 11111 11123446777777777776654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=262.15 Aligned_cols=150 Identities=28% Similarity=0.494 Sum_probs=138.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.+ +|||||+++++|.+...+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence 488999999999999999999999999999999765444455667889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||++|+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~ 151 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGF 151 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 77889999999998643
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=255.01 Aligned_cols=181 Identities=22% Similarity=0.318 Sum_probs=149.8
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+++ +||||+++++++.+....|+|||||.+|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999999765544555667888999999999 89999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--eee
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--WLR 293 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--~~~ 293 (489)
|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......... ..+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence 99999888889999999999999999999999999999999999999 6778899999999986432221111 111
Q ss_pred ccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 294 LHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 294 ~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..| .-+-++.+.++.+++.|..+|...
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 122 112234477788888887777543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=262.00 Aligned_cols=151 Identities=26% Similarity=0.497 Sum_probs=139.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|++..+++.||||++.+...........+.+|+.+|+.+ +||||++++++|.+...+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence 589999999999999999999999999999999765444445567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||.||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceecc
Confidence 999999999999888889999999999999999999999999999999999999 778899999999997653
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=257.58 Aligned_cols=188 Identities=28% Similarity=0.350 Sum_probs=153.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 5699999999999999999999999999999999765444444556788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|..+.....
T Consensus 122 ~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 122 MEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecccCCc
Confidence 999999999998854 468999999999999999999999999999999999999 6778999999999987643222
Q ss_pred ee---eeeecc---------------C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FR---VWLRLH---------------F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~---~~~~~~---------------y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. ...+.. | .-+-++.++++.+++.|..+|...
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 11 011111 1 112234477888888888777543
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=253.80 Aligned_cols=146 Identities=28% Similarity=0.411 Sum_probs=133.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
++||+|+||.||+|++..+++.||+|++.+.........+.+..|++++..+.+||||+++++++.+.+.+|+|||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999998654444556677888999998876899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEG 146 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceec
Confidence 9999999888889999999999999999999999999999999999999 67789999999999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=257.33 Aligned_cols=182 Identities=26% Similarity=0.341 Sum_probs=149.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+++++.+ +||||++++++|.....+|||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3699999999999999999999999999865444455667788999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-ee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT-FR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~-~~-~~ 291 (489)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....... .. ..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 6778899999999876422211 11 01
Q ss_pred ee-----------ccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LR-----------LHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~-----------~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+ ..| .-+-++.+.++.+++.|..+|..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 197 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCC
Confidence 11 111 11223457788888888877754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=252.26 Aligned_cols=145 Identities=30% Similarity=0.466 Sum_probs=132.6
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+++++.+ +||||+++++++.....+|||||||.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999875544455567788999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|..++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEG 146 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeec
Confidence 9999998888889999999999999999999997 799999999999999 67788999999998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=248.17 Aligned_cols=187 Identities=24% Similarity=0.322 Sum_probs=153.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+|+++ +|+||+.+++++.+.+..|+|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEE
Confidence 78889999999999999999999999999999765444334445678999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||.+|+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||++..+..+..
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCCe
Confidence 99999998887643 358899999999999999999999999999999999999 6678899999999987654332
Q ss_pred eee-eeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... +.+..| --+-++.+.++.+++.|..+|...
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 211 111112 112234578888888888877643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=248.97 Aligned_cols=185 Identities=24% Similarity=0.296 Sum_probs=146.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||+||+|++..+++.||+|++..... ......+.+|+++++.+ +||||+++++++.+....|+|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEE
Confidence 359999999999999999999999999999999865422 22234677899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCC
Confidence 999975 8988886654 47889999999999999999999999999999999999 677889999999997653221
Q ss_pred ce--eeeeeccC----------C----CCcchhHHHHHHHhcccccCCC
Q 040003 287 TF--RVWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~--~~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ....+..| + -+.++.+.++.+++.|...|..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~ 206 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPG 206 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 00111111 1 1123446777788888777654
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=256.76 Aligned_cols=188 Identities=26% Similarity=0.326 Sum_probs=153.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEE
Confidence 4599999999999999999999999999999999764443444456678999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 122 ~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 122 MEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCCCc
Confidence 999999999998754 468999999999999999999999999999999999999 7788999999999987643221
Q ss_pred ee---eeeecc---------------CC--CCcchhHHHHHHHhcccccCCCC
Q 040003 288 FR---VWLRLH---------------FL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~---~~~~~~---------------yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. .+.+.. |. -+-++.++++.+++.|..+|...
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 250 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC
Confidence 10 011111 11 11234478888888888887654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=254.34 Aligned_cols=187 Identities=25% Similarity=0.294 Sum_probs=153.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+..|++++..+.+|++|+.+++++.+.+.+|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 88999999999999999999999999999999865444455667788999999999545678999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc--
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT-- 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~-- 287 (489)
||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCCce
Confidence 99999999999888889999999999999999999999999999999999999 6778899999999875422111
Q ss_pred eeeeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| ++ +-++.++++.+++.|..+|..
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 111112222 11 223457788888888877754
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=248.93 Aligned_cols=235 Identities=20% Similarity=0.298 Sum_probs=172.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
...++..||+|.||+||+|++.. .||||++..... .++..+.|++|+.++++- +|.||+-++||+..... .||.
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred Hhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eeee
Confidence 35678899999999999998764 699999987654 456889999999999998 89999999999998877 9999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC---C
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR---P 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~---~ 284 (489)
.+|+|.+|+.+|.- +.+|.....+.|++||++|+.|||.++|||||||..||+| .+++.|||+||||+..-. .
T Consensus 467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeeeecc
Confidence 99999999999854 3578889999999999999999999999999999999999 667899999999986421 1
Q ss_pred CCceee------ee-----e--ccCCCCcc----hhHHHHHHHhcccccCCCCCCCCCCCC---CC-Ccc-hhhhhhccH
Q 040003 285 GLTFRV------WL-----R--LHFLFFQK----QRQSVLQTRLVRNLNEPGSLWPDKVAV---PP-IGD-RVIAESLSE 342 (489)
Q Consensus 285 ~~~~~~------~~-----~--~~ypf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~ 342 (489)
...+.. |+ + ...||.-. ..+.++++++.|.++|.. ...+...+ .. ... ........+
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIifmVGrG~l~pd~s~~~s~~p 622 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQIIFMVGRGYLMPDLSKIRSNCP 622 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheEEEecccccCccchhhhccCH
Confidence 111111 11 1 11255433 347899999999999983 22332211 00 000 111123334
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.++++|.. .|+..+.+-+....++...|..+
T Consensus 623 k~mk~Ll~--~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 623 KAMKRLLS--DCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred HHHHHHHH--HHHhcCcccCccHHHHHHHHHHh
Confidence 44444433 45566666788888877755544
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-31 Score=256.22 Aligned_cols=235 Identities=23% Similarity=0.336 Sum_probs=183.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe-EEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA-VHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-~~l 206 (489)
+.|..++++|+|+||.+++++++..++.|++|.|.......+ ......+|+.+++++ .|||||.+.+.|..++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEEE
Confidence 459999999999999999999999999999999987765544 444778999999999 89999999999999888 999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+||+||+|.+.+.+. ..+++..+..|+.|++.|+.|||+++|+|||||+.||++ ..+..|||.|||+|+...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl---tk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL---TKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc---cccCceeecchhhhhhcCC
Confidence 99999999999999764 358999999999999999999999999999999999999 6677799999999999988
Q ss_pred CCc--eeeeeeccC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHH
Q 040003 285 GLT--FRVWLRLHF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 285 ~~~--~~~~~~~~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
... .+.+.+..| ||.. ++.+|+++++..-++.|....|.... -+.. +.+...++......++
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li--~ki~-~~~~~Plp~~ys~el~ 235 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELI--LKIN-RGLYSPLPSMYSSELR 235 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHH--HHHh-hccCCCCCccccHHHH
Confidence 753 333444444 4443 34477888888888888776664311 0000 0111122222333344
Q ss_pred HHH-hhhcCCCCCCccHHHHHH
Q 040003 350 EMF-KMIDTDNSGYITLEELKK 370 (489)
Q Consensus 350 ~~F-~~~D~d~~g~i~~~el~~ 370 (489)
.++ .++..++.-+++..+|..
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhh
Confidence 333 467788888999999854
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=254.15 Aligned_cols=240 Identities=20% Similarity=0.232 Sum_probs=168.3
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA- 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 201 (489)
++|+++++||+|+||.||+|.+. .+++.||+|++... ........+.+|+.+|..+.+|||||++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG--ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc--cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 56999999999999999999753 34578999998643 23345567899999999997799999999988764
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
..+|+|||||++|+|.+++...
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4689999999999999988643
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---------
Q 040003 224 ----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--------- 290 (489)
Q Consensus 224 ----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--------- 290 (489)
..++...+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+........
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 136677888899999999999999999999999999999 6678899999999986543222110
Q ss_pred ------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCC
Q 040003 291 ------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDN 359 (489)
Q Consensus 291 ------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~ 359 (489)
+....| .-+-++.+.++.+++. |..+|+........ .+..-.........+.+-.. -+.+++..|+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---li~~cl~~dp 318 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYR---IMLACWQGDP 318 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHH---HHHHHccCCh
Confidence 111111 1122345778888875 77777653221100 00000000011122222221 2336778888
Q ss_pred CCCccHHHHHHHHHHh
Q 040003 360 SGYITLEELKKGLQRV 375 (489)
Q Consensus 360 ~g~i~~~el~~~l~~l 375 (489)
+.|.+..|+...|..+
T Consensus 319 ~~RPs~~el~~~l~~~ 334 (338)
T cd05102 319 KERPTFSALVEILGDL 334 (338)
T ss_pred hhCcCHHHHHHHHHHH
Confidence 8899999988877654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-30 Score=251.06 Aligned_cols=187 Identities=25% Similarity=0.283 Sum_probs=152.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|++..+++.||+|++.+...........+..|..++..+.+|++|+.+++++.+.+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 88899999999999999999999999999999875444445556778899999888678999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
||.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.........
T Consensus 82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCcc
Confidence 99999999999888889999999999999999999999999999999999999 777889999999998643211111
Q ss_pred e--eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 290 V--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 290 ~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. ..+..| ++ +-++.++++.+++.|..+|..
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 1 111111 11 123446777777777776654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=254.89 Aligned_cols=187 Identities=28% Similarity=0.345 Sum_probs=153.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 5699999999999999999999999999999999764443444556688999999998 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 122 ~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 122 MEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcCcCCc
Confidence 999999999998754 468999999999999999999999999999999999999 6778899999999987643221
Q ss_pred ee---eeeeccC-----------------CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FR---VWLRLHF-----------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~---~~~~~~y-----------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ...+..| .-+-++.+.++.+++.|..+|..
T Consensus 198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 11 1111111 11223447788888888877754
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=251.83 Aligned_cols=153 Identities=22% Similarity=0.394 Sum_probs=138.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||+||+|++..+++.||+|++.+.........+.+.+|+.++..+ +|+||+.++++|.+.+++|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEEE
Confidence 599999999999999999999999999999999764434444566788999999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||.||+|.+++.+ ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCC
Confidence 99999999999876 4578999999999999999999999999999999999999 67788999999999876543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=253.16 Aligned_cols=151 Identities=26% Similarity=0.463 Sum_probs=138.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 488999999999999999999999999999999765443445567888999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+||+|.+++...+.+++..++.++.|++.||+|||++|||||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCcccc
Confidence 999999999999888889999999999999999999999999999999999999 678899999999987653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=251.33 Aligned_cols=183 Identities=25% Similarity=0.295 Sum_probs=148.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++..+.+||||+++++++.+...+|+|||||.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999997654444455667788999998876799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee--ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR--VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~--~~ 291 (489)
|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......... ..
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 677889999999987642211111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| .-+-++.+.++.+++.|..+|..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 11111 11223447777788888777754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=252.63 Aligned_cols=183 Identities=25% Similarity=0.326 Sum_probs=148.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
++||+|+||.||+|.+..+++.||+|++++.........+.+..|..++..+.+||||+++++++.....+|+|||||+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998654434445566777888887766899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--e
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--W 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--~ 291 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.......... .
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 6778899999999986543222111 1
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| .-+-++.+.++.+++.|..+|..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC
Confidence 11112 12223457788888888777654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=248.99 Aligned_cols=153 Identities=22% Similarity=0.365 Sum_probs=137.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..+ +|+||+++++++.+.+..|+||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 599999999999999999999999999999999764333344556688899999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||.||+|.+++.. .+.+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCC
Confidence 99999999999976 4678999999999999999999999999999999999999 67788999999999876543
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=249.23 Aligned_cols=153 Identities=28% Similarity=0.422 Sum_probs=139.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.+.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+....||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEE
Confidence 489999999999999999999999999999999875544445567788999999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCC
Confidence 999999999999776 679999999999999999999999999999999999999 77889999999999876543
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=216.92 Aligned_cols=185 Identities=24% Similarity=0.356 Sum_probs=151.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.-.++||+|.||+||+|+++.+++.||+|.++...- ++..-....+||.+|+.| +|.|||++++....+..+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkel-khknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEeH
Confidence 36667899999999999999999999999999976432 222335678999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||. .+|..+... +|.+....++.++.|++.||.+||+++++||||||.|+|+ +.+|.+||+|||+|+.+.-...
T Consensus 81 e~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 81 EFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCceE
Confidence 9995 478777654 5789999999999999999999999999999999999999 7789999999999998876654
Q ss_pred eee--eeeccC--------------CCCcchhHHHHHHHhc-ccccCCC
Q 040003 288 FRV--WLRLHF--------------LFFQKQRQSVLQTRLV-RNLNEPG 319 (489)
Q Consensus 288 ~~~--~~~~~y--------------pf~~~~~~~~~~~i~~-~~~~~~~ 319 (489)
... +.+..| -...++.++|+.++-. |.+-||+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 332 333333 2334566888888775 4555665
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=250.16 Aligned_cols=182 Identities=21% Similarity=0.313 Sum_probs=151.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++++...........+.+|+.++..+.+||||++++++|.+...+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999998765555556677889999999997799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC-CCCcee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR-PGLTFR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~-~~~~~~-~~ 291 (489)
|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... .+.... ..
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCcccccc
Confidence 9999998888899999999999999999999999999999999999999 677889999999997532 111111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.+..| .-+-++.+.++.+++.|..+|.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 11112 1222445888889999988875
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=250.46 Aligned_cols=186 Identities=26% Similarity=0.308 Sum_probs=148.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHH---HhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH---HLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~---~l~~hpniv~~~~~~~~~~~~~l 206 (489)
|++.+.||+|+||.||+|.+..+++.||||++.+.........+.+.+|++++. .+ +||||+++++++.+...+|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l-~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSE-RHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcccc-CCCChhceeeEEEcCCEEEE
Confidence 678899999999999999999999999999998654434445667778877765 44 69999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||.+++|..++. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 v~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 80 VMEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 999999999988764 4579999999999999999999999999999999999999 677899999999987543221
Q ss_pred cee--eeeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 287 TFR--VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~~~--~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ...+..| .-+-++.+.++.+++.|..+|...
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 111 1111111 112234477888888888777543
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=252.19 Aligned_cols=184 Identities=24% Similarity=0.305 Sum_probs=148.1
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|+++.+++.||+|++.+...........+..|+.++..+.+||||+++++++.+.+.+|+|||||.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999997654333344566778988888766899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--e
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--W 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--~ 291 (489)
|+|..++...+.+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++....+..... .
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceeccC
Confidence 9999999888889999999999999999999999999999999999999 6778899999999875432211111 1
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.+..| .-+-++.+.++.+++.|..+|...
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 11111 112234477888888887777543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=251.07 Aligned_cols=227 Identities=22% Similarity=0.359 Sum_probs=176.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|+..+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+.+|+.+|.++ +++||.++|+.|..+..+|++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHH
Confidence 34888899999999999999999999999999997653 345678899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||++.+.+...+.+.+..+..+++.++.||.|||..+.||||||+.|||+ ...+.+||+|||+|........
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~---s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL---SESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE---eccCcEEEEecceeeeeechhh
Confidence 9999999999999877777999999999999999999999999999999999999 5568899999999998876655
Q ss_pred eeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC--------------CCCCCCCcchhhhh--------hccHHHH
Q 040003 288 FRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD--------------KVAVPPIGDRVIAE--------SLSEEEI 345 (489)
Q Consensus 288 ~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--------~~~~~~~ 345 (489)
.+..+ .+.|||+..+ + |....|+...++|.- ....+..+...|+. .+++.-.
T Consensus 167 rr~tf-vGTPfwMAPE--V---I~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~k 240 (467)
T KOG0201|consen 167 RRKTF-VGTPFWMAPE--V---IKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFK 240 (467)
T ss_pred ccccc-cccccccchh--h---hccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHH
Confidence 44222 2348887632 1 223356666666621 11111111222222 2333222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+.+. .|++.|+.-|.++.+|.
T Consensus 241 EFV~---~CL~k~P~~RpsA~~LL 261 (467)
T KOG0201|consen 241 EFVE---ACLDKNPEFRPSAKELL 261 (467)
T ss_pred HHHH---HHhhcCcccCcCHHHHh
Confidence 2222 46899999999999985
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=242.49 Aligned_cols=151 Identities=30% Similarity=0.483 Sum_probs=143.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
-+.|..+++||+|.||+|.+|+.+.+++.||+|++++..+....++..-+.|-++|+.. +||.+..+...|+..+.+|+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCceEEE
Confidence 35688999999999999999999999999999999998888888888889999999998 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
||||..||.|+-+|.+...+++..++.+...|+.||.|||+++||.||||.+|+|| |.+|++||+||||++.
T Consensus 246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchh
Confidence 99999999999999988899999999999999999999999999999999999999 8999999999999985
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=255.49 Aligned_cols=153 Identities=27% Similarity=0.522 Sum_probs=140.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|++..+++.||||++.+...........+.+|+.++..+ +||||+++++++.+...+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEE
Confidence 599999999999999999999999999999999865444445567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCccc
Confidence 999999999999888889999999999999999999999999999999999999 77888999999999876544
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=248.94 Aligned_cols=144 Identities=26% Similarity=0.467 Sum_probs=129.4
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
||+|+||+||+|++..+++.||||++.+..............|..++..+. +||||+.+++++.+...+|+|||||.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999997654444444556667888887764 699999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKAN 146 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCC
Confidence 9999999888899999999999999999999999999999999999999 66788999999998764
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=249.74 Aligned_cols=231 Identities=23% Similarity=0.302 Sum_probs=172.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.+++++.||+|.||.||+|.++.+ ..||+|.++..... .+.+.+|+++|++| +|+|||++++++...+.+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~----~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMS----PEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccC----hhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEEE
Confidence 466789999999999999998754 37999999765433 25677999999999 8999999999999988999999
Q ss_pred eecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||..|+|.++|.. .+.+...+...++.||+.|++||+++++|||||-..|||+ +++..+||+|||||+.+ ...
T Consensus 281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~-~d~ 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLI-GDD 356 (468)
T ss_pred EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEccccccccc-CCC
Confidence 99999999999987 4578999999999999999999999999999999999999 77889999999999943 334
Q ss_pred ceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCCCC----------------------CcchhhhhhccHHH
Q 040003 287 TFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPP----------------------IGDRVIAESLSEEE 344 (489)
Q Consensus 287 ~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~ 344 (489)
.++.--.+.+|..-...+ .+..+++...++.|+.-..+-. .+-++-.....+++
T Consensus 357 ~Y~~~~~~kfPIkWtAPE----a~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~ 432 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPE----ALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDE 432 (468)
T ss_pred ceeecCCCCCCceecCHH----HHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHH
Confidence 444333445553322222 3345556666777754331100 01112222233444
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-++ +-.++..++..|.|.+.|...+..+
T Consensus 433 vY~l--M~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 433 VYEL--MKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred HHHH--HHHHhhCCcccCCCHHHHHHHHHHh
Confidence 4333 2356778888899988777766554
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=253.07 Aligned_cols=218 Identities=22% Similarity=0.326 Sum_probs=178.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|..++.||-|+||.|.+++...|...||+|.+++..+-....+..++.|-.||... +.+.||+||..|++.+.+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEE
Confidence 488899999999999999999999999999999988777777788899999999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC--C
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG--L 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~--~ 286 (489)
+|++||++..+|.+.+.|.|..++.++..+..|+++.|..|+|||||||+|||| |.+|+|||+||||+.-++-. .
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceecccc
Confidence 999999999999999999999999999999999999999999999999999999 89999999999999755311 0
Q ss_pred ceee------------------------------------------eeeccC---------------CCCcchhHHHHHH
Q 040003 287 TFRV------------------------------------------WLRLHF---------------LFFQKQRQSVLQT 309 (489)
Q Consensus 287 ~~~~------------------------------------------~~~~~y---------------pf~~~~~~~~~~~ 309 (489)
.+.. +.++.| .||.. +.|+.+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~--gvil~e 863 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV--GVILYE 863 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh--hHHHHH
Confidence 0000 344444 56555 889999
Q ss_pred HhcccccCCCCCCCCCC----CCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 310 RLVRNLNEPGSLWPDKV----AVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 310 i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
++.|..+|-.+.--... .|..........+++++....|.++.
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc 910 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC 910 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh
Confidence 99999999765432211 12222222223466777666666554
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=248.65 Aligned_cols=187 Identities=19% Similarity=0.255 Sum_probs=152.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.++||+|+||.||+++++.+++.||+|++.+...........+.+|+.++..+ +|+||+.+++++.+...+|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999754333344455688899999998 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||.+|+|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+.....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCCc
Confidence 99999999999976 4678999999999999999999999999999999999999 6778899999999976543222
Q ss_pred eee---eeecc----------------C--CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV---WLRLH----------------F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~---~~~~~----------------y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... ..+.. | .-+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 111 11111 1 11223447788888888777754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=248.89 Aligned_cols=186 Identities=25% Similarity=0.394 Sum_probs=150.8
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
|++++.||+|+||+||+|++. .+++.||+|++.+.... .....+.+.+|+.+++.+.+||||+++++++...+.+|
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 889999999999999998864 47899999999754322 23345678899999999977999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+|||||.+|+|.+++..++.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCcccccc
Confidence 999999999999999888889999999999999999999999999999999999999 66788999999999875432
Q ss_pred Cce---eeeeeccC--------------CCCcchhHHHHHHHhcccccCC
Q 040003 286 LTF---RVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~---~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
... ....+..| .-+-++.+.++.+++.|..+|.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCC
Confidence 211 11111111 1122344777888888877765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=249.74 Aligned_cols=187 Identities=24% Similarity=0.281 Sum_probs=152.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|+..+.||+|+||+||+|.++.+++.||+|++.+.........+.+..|+.++..+.+|++|+++++++.+.+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 67889999999999999999999999999999865444445566788899999988667889999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.........
T Consensus 82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCccc
Confidence 99999999999888889999999999999999999999999999999999999 677889999999998643221111
Q ss_pred e--eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 290 V--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 290 ~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. ..+..| + -+-++.+.++.+++.|..+|..
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 1 111111 1 1223447778888888777654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-29 Score=248.77 Aligned_cols=224 Identities=26% Similarity=0.345 Sum_probs=170.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc---E-EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK---E-FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---~-~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.-.+.++||+|+||.||+|+.+..+. . ||+|..+.........+..+.+|+++|+.+ +|||||++||+......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCc
Confidence 334567899999999999998776432 3 899988754445677889999999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|||||+|.||+|.++|.+.+ .++..+...++.+++.||+|||++++|||||-..|+|+ .....+||+|||||+.-
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---SKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---cCCCeEEeCccccccCC
Confidence 999999999999999999876 49999999999999999999999999999999999999 55666899999998765
Q ss_pred CCCCcee-------eee---------------------------e-ccCCCCcchhHHHHHHHhcccccCCCCCCCCCCC
Q 040003 283 RPGLTFR-------VWL---------------------------R-LHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVA 327 (489)
Q Consensus 283 ~~~~~~~-------~~~---------------------------~-~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 327 (489)
..-.... .|| . +..||.+.....+...|....+..+.
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-------- 384 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-------- 384 (474)
T ss_pred cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC--------
Confidence 3100000 011 1 11144444444444444333332221
Q ss_pred CCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 328 VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
....+..+..+.. +++..|++-|.++.++...+..+
T Consensus 385 ----------~~~~p~~~~~~~~--~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 385 ----------PSKTPKELAKVMK--QCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred ----------CCCCHHHHHHHHH--HhccCChhhccCHHHHHHHHHHH
Confidence 1234455555544 77888888999999998888765
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=260.37 Aligned_cols=234 Identities=22% Similarity=0.296 Sum_probs=169.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEE-EEe------C
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGA-YED------A 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~-~~~------~ 201 (489)
.++|.+.|.+|||+.||+|.+...+..||+|++-. .++..++.+++||++|+.|++|+|||.+++. ... .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 47889999999999999999998889999998853 4778889999999999999999999999993 221 2
Q ss_pred CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
-.++|+||||.||.|.|++..+ ..|++.++..|+.+++.||.+||.+. |||||||-||||| ..++..||||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl---s~~g~~KLCDFG 191 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL---SADGNYKLCDFG 191 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE---cCCCCEEeCccc
Confidence 3678999999999999999754 46999999999999999999999998 9999999999999 667889999999
Q ss_pred cccccCCCC-ceee----------eeeccC------------CCCc----chhHHHHHHHhcccccCCCCCCCCCCCCCC
Q 040003 278 LSMFFRPGL-TFRV----------WLRLHF------------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKVAVPP 330 (489)
Q Consensus 278 la~~~~~~~-~~~~----------~~~~~y------------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 330 (489)
.|.-..... .... .-+..| |..- |..+++++.+....-+|....- .++-
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---laIl- 267 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---LAIL- 267 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---eeEE-
Confidence 987543222 1111 111122 2221 2236777776665555543210 0000
Q ss_pred Ccchhhhh--hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 331 IGDRVIAE--SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 331 ~~~~~~~~--~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+.+.++. ..+..-...|+ .++..|++-|+++.++...+.++
T Consensus 268 ng~Y~~P~~p~ys~~l~~LI~---~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 268 NGNYSFPPFPNYSDRLKDLIR---TMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred eccccCCCCccHHHHHHHHHH---HHhccCcccCCCHHHHHHHHHHH
Confidence 00111111 12222222222 56889999999999988776665
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=247.06 Aligned_cols=182 Identities=20% Similarity=0.279 Sum_probs=151.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++.++.+||||+++++++.+...+|+|||||.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998765555566677889999998886899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC-Ccee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG-LTFR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~-~~~~-~~ 291 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..... .... ..
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999998888889999999999999999999999999999999999999 77789999999999764221 1111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.+..| .-+-++.+.++.+++.|..+|.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 11111 1223445788888888887774
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=250.00 Aligned_cols=184 Identities=26% Similarity=0.338 Sum_probs=151.0
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|++..+++.||+|++.+...........+.+|++++..+.+||||+++++++.+.+.+|+|||||.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998765444555677889999999887799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc--eeee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT--FRVW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~--~~~~ 291 (489)
|+|..++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++....... ...+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence 9999999888889999999999999999999999999999999999999 6778899999999975422211 1111
Q ss_pred eeccC---------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 292 LRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 292 ~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.+..| ++ +-++.+.++.+++.|..+|...
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~ 199 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC
Confidence 11122 11 2234577888888888877543
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=248.79 Aligned_cols=183 Identities=25% Similarity=0.315 Sum_probs=147.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|++..+++.||+|++.+..............|..++..+.+||||+++++++.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998654333344566778888888765899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc--eeee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT--FRVW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~--~~~~ 291 (489)
|+|.+++.....+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++....+.. ....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCCceeeec
Confidence 9999999887789999999999999999999999999999999999999 6778899999999976432221 1111
Q ss_pred eeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 292 LRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 292 ~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+..| + -+-++.++++.+++.|..+|..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence 11122 1 1223447888888888877754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=251.88 Aligned_cols=241 Identities=19% Similarity=0.243 Sum_probs=172.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||.||+|++..++ ..||+|++.... .....+.+.+|+++|+.+.+|+|||++++++...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 346999999999999999999865443 579999986542 2344677889999999996799999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
..+|+|||||.+|+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999988542
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-
Q 040003 224 ------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV- 290 (489)
Q Consensus 224 ------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~- 290 (489)
..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+..+.....
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~---~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE---eCCCeEEEeeceeeeeccCCcceeec
Confidence 136777889999999999999999999999999999999 5677899999999987644332211
Q ss_pred --------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 291 --------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 291 --------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
+....| .-+-++.+.++.+++. |..+|+........ .+............+.+-.+.+.
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~-- 349 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMK-- 349 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHH--
Confidence 011111 1122345778888875 88777654321100 00000000011112222222222
Q ss_pred HhhhcCCCCCCccHHHHHHHHHHh
Q 040003 352 FKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+++..|+..|++..++.++|.++
T Consensus 350 -~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 350 -MCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred -HHcCCChhhCcCHHHHHHHHHHH
Confidence 56778888899999998888764
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=245.18 Aligned_cols=182 Identities=20% Similarity=0.249 Sum_probs=144.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 207 (489)
.|.-...||+|+||.||+|.... +..||||.+....... ..+|.+|+.+|.++ +|||+|+|+|||.+.+ +.+||
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred CCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEEEE
Confidence 46666789999999999998764 4899999876543221 34599999999999 6999999999999998 59999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLG---VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|||.+|+|.++|.... .+++.....|+..++.||+|||+.. |||||||++|||| |.+..+||+|||+|+..
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~ 227 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAKLG 227 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcccC
Confidence 99999999999997654 7899999999999999999999854 9999999999999 88999999999999766
Q ss_pred CC-CCceee--eeeccC--C-CC----------cchhHHHHHHHhcccccCC
Q 040003 283 RP-GLTFRV--WLRLHF--L-FF----------QKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 283 ~~-~~~~~~--~~~~~y--p-f~----------~~~~~~~~~~i~~~~~~~~ 318 (489)
.. ...... ..+.+| | |. --+.+.++.+++.|+....
T Consensus 228 ~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d 279 (361)
T KOG1187|consen 228 PEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVD 279 (361)
T ss_pred CccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccC
Confidence 54 222211 223333 1 00 0133667778888885444
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=248.47 Aligned_cols=183 Identities=25% Similarity=0.357 Sum_probs=146.9
Q ss_pred ceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+|+.+ +||||++++++|...+.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEe
Confidence 57999999999999864 47889999999764322 223345678999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
|+.+++|.+++...+.+.+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCcc
Confidence 99999999999888889999999999999999999999999999999999999 677899999999997543222211
Q ss_pred e--eeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 290 V--WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 290 ~--~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. ..+..| .-+-++.+.++.+++.|..+|...
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~ 203 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE 203 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC
Confidence 1 111111 111234477888888888877643
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-30 Score=272.87 Aligned_cols=152 Identities=28% Similarity=0.433 Sum_probs=141.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|.++++||+|+||.|.+++++.|++.||+|++.+-..-...+...|..|-.||..- +.+.||.++..|++..++|+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEE
Confidence 5699999999999999999999999999999999875444445557788899999886 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||+||+|..++.+.+++++..++.|+..|+.||..||+.|+|||||||+|||| |..|+|||+|||.+..+.
T Consensus 154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcC
Confidence 9999999999999998899999999999999999999999999999999999999 899999999999998876
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-30 Score=258.49 Aligned_cols=188 Identities=24% Similarity=0.331 Sum_probs=155.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC------
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV------ 202 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~------ 202 (489)
.|...+.||+|+||.||+++++.+|+.||||.+++.. ....+++..+|+++|++| +|+|||++++.-++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccc
Confidence 3667788999999999999999999999999987643 334567889999999999 6999999998765543
Q ss_pred eEEEEEeecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeecc
Q 040003 203 AVHVVMELCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGL 278 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGl 278 (489)
...+|||||.||+|...+.+. ..+++.+...++..+..|+.|||++|||||||||+||++.... ....-||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 567999999999999999643 4599999999999999999999999999999999999985433 445689999999
Q ss_pred ccccCCCCceee-eeeccC--C--------C----CcchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTFRV-WLRLHF--L--------F----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~~~-~~~~~y--p--------f----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
|+-+.++..+.. +++..| | | +-++.+.+++....|..+|-.
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 999988886665 455555 1 1 123558888888888888864
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=243.69 Aligned_cols=147 Identities=31% Similarity=0.495 Sum_probs=130.3
Q ss_pred ceeccCCceEEEEEEE---cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVE---KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~---~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
+.||+|+||.||++++ ..+++.||+|++.+.... ......+.+|+++|+++ +||||+++++++.+.+.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999876 357899999999764322 23345677899999999 899999999999999999999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 211 CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 211 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.+|+|.+++.+...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~ 151 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDH 151 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCC
Confidence 9999999999888889999999999999999999999999999999999999 67788999999999865443
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-30 Score=255.89 Aligned_cols=188 Identities=24% Similarity=0.411 Sum_probs=165.4
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+....|.-++.||.|+||.||-|++..+.+.||||.+.-......+..+.++.|+..|++| .|||+|.+-|+|......
T Consensus 23 DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 23 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTA 101 (948)
T ss_pred CHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchH
Confidence 3445688899999999999999999999999999999876667778889999999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRII-QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||||||-| +-.|++. .++.+.+.++..|+.+.+.||.|||+++.||||||..|||| .+.|.|||+|||.|....
T Consensus 102 WLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 102 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMA 177 (948)
T ss_pred HHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcC
Confidence 999999965 6666663 34578999999999999999999999999999999999999 778999999999999988
Q ss_pred CCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 284 PGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 284 ~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
+..++ .+.|||... +++-.+=.|.|+-..++|+-
T Consensus 178 PAnsF-----vGTPywMAP--EVILAMDEGqYdgkvDvWSL 211 (948)
T KOG0577|consen 178 PANSF-----VGTPYWMAP--EVILAMDEGQYDGKVDVWSL 211 (948)
T ss_pred chhcc-----cCCccccch--hHheeccccccCCccceeec
Confidence 87776 356999984 55556677999999999953
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=250.55 Aligned_cols=239 Identities=19% Similarity=0.240 Sum_probs=166.9
Q ss_pred cceeecceeccCCceEEEEEEE-----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE-----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
++|++++.||+|+||.||+|.+ ..++..||+|+++... .....+.+.+|+.+|+.+.+|||||++++++.+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 4599999999999999999974 3466789999986432 23345678899999999977999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------------------------------------------------
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---------------------------------------------------------- 224 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 224 (489)
..|+|||||.+|+|.+++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999999999999886432
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 225 -----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 225 -----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE---ECCCcEEEecCccceeccCccc
Confidence 35677788999999999999999999999999999999 5567899999999987654322
Q ss_pred eee--------------ee-eccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHH
Q 040003 288 FRV--------------WL-RLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 288 ~~~--------------~~-~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 347 (489)
... ++ ...| .-+-++.+.++.+++. |..+|......... .+............+. ++..
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 348 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPS-EMYD 348 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCH-HHHH
Confidence 111 00 1111 1112344777777775 66655432211000 0000000000111122 2222
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+ +-.+++.|++.|.++.|+...|.+
T Consensus 349 l--i~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 349 I--MKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred H--HHHHccCChhHCcCHHHHHHHHHh
Confidence 2 225677888888888888777754
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=238.84 Aligned_cols=187 Identities=21% Similarity=0.287 Sum_probs=151.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||+||+|+++.+++.||+|++..... .....+.+.+|+++++.+ +||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEE
Confidence 59999999999999999999999999999999975432 233456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.++.+..+....+.+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++..+..+...
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCcccccccccc
Confidence 999987776554445678999999999999999999999999999999999999 67788999999999876533211
Q ss_pred e---eeeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 289 R---VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 289 ~---~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. ...+..| .-+-++.+.++.+++.|...|+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 1 1111111 112235578888899998877653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=239.47 Aligned_cols=186 Identities=24% Similarity=0.378 Sum_probs=155.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
....++++||+|-||.|.+|.-. .+..||+|.++.. .....+..|.+||++|.+| +|||||+++|.|..++.+++|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~--a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI 613 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPD--ATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMI 613 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcc--cchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHH
Confidence 45778899999999999999854 4689999998654 3445568999999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||++|+|..++..+. .........++.||..|+.||.+.++|||||.+.|+|+ +.++++||+|||+++-+..+
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccccC
Confidence 99999999999998763 23445566799999999999999999999999999999 88999999999999999888
Q ss_pred CceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 286 LTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 286 ~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
..+..-.+.-.|..-. -.+.|+.|++...++.|..
T Consensus 691 ~yy~vqgr~vlpiRwm----awEsillgkFttaSDvWaf 725 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWM----AWESILLGKFTTASDVWAF 725 (807)
T ss_pred Cceeeecceeeeeeeh----hHHHHHhccccchhhhhhh
Confidence 8877633322342211 2356788999888888843
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=238.52 Aligned_cols=186 Identities=25% Similarity=0.326 Sum_probs=150.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||+||++.+..+++.||+|++.............+.+|+.+++.+ +||||+.+++++.....+|+|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEEe
Confidence 88899999999999999999999999999999765443334445678899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||.+|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +..+.++|+|||++..+..+..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCCc
Confidence 99999999887653 358999999999999999999999999999999999999 6678899999999987654332
Q ss_pred eee-eeeccC-----------C--CCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... +.+..| . -+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence 211 111111 0 1112347778888888777653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-28 Score=250.91 Aligned_cols=231 Identities=19% Similarity=0.217 Sum_probs=168.8
Q ss_pred cceeecceeccCCceEEEEEEEcCC-CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT-QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
..|.+.+.||+|+||.||+|.+..+ ++.||+|.+.. ........+.+|+.+|+.+ +|||||++++++...+.+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~---~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML---NDERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc---CCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEE
Confidence 3499999999999999999998877 78899987643 2344556788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||||.||+|.+++.. ...+++..+..++.||+.||+|||++|||||||||+|||+ +..+.+||+|||+|+.+
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCceec
Confidence 9999999999987754 3468899999999999999999999999999999999999 67788999999999877
Q ss_pred CCCCcee----eeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFR----VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~----~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 343 (489)
....... ...+..| .+ +-++.++++.+++.|..+|......... ...... ......++.+
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~s~~ 298 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-DPFPCPVSSG 298 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCccCCHH
Confidence 5432211 1112222 11 1234577888888887776543210000 000000 0011123333
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
-.+.+. .++..|++.|.+..++.
T Consensus 299 ~~~li~---~~L~~dP~~Rps~~~~l 321 (478)
T PTZ00267 299 MKALLD---PLLSKNPALRPTTQQLL 321 (478)
T ss_pred HHHHHH---HHhccChhhCcCHHHHH
Confidence 333333 46778889999988864
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=241.85 Aligned_cols=186 Identities=20% Similarity=0.263 Sum_probs=153.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|.+..++..+|+|.+.... .......+.+|+++|+.+ +||||++++++|.+.+.+|+|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEE
Confidence 56999999999999999999999999999999986532 344557789999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.+|+|.+++...+.+++..+..++.+++.||.|||+. +|+||||||+|||+ +.++.+||+|||++..+....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhhhc
Confidence 99999999999998888899999999999999999999985 79999999999999 667789999999998654321
Q ss_pred ceeeeeec-----------cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRL-----------HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~-----------~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+. .| .-+.++.++++.+++.|..+|+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 11111111 11 11223457788888888877753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=242.77 Aligned_cols=145 Identities=25% Similarity=0.452 Sum_probs=128.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI-MHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||+||+|.+..+|+.||+|++.+...........+.+|..+ ++.+ +||||+++++++...+.+|+|||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 369999999999999999999999999976544344445566667664 5566 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEG 146 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccC
Confidence 99999999888889999999999999999999999999999999999999 67788999999998754
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=242.97 Aligned_cols=145 Identities=27% Similarity=0.467 Sum_probs=128.2
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHH-HHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI-MHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||+||+|++..+++.||+|++.+...........+.+|..+ ++.+ +||||+++++++.+....|+|||||.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 369999999999999999999999999976543333444556666654 5667 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEG 146 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCccc
Confidence 99999999888889999999999999999999999999999999999999 67788999999998764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=243.47 Aligned_cols=182 Identities=19% Similarity=0.277 Sum_probs=151.3
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.++.++.+||||+.+++++.+...+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998765555566778899999999997799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC-CCcee-ee
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP-GLTFR-VW 291 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~-~~~~~-~~ 291 (489)
|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.... +.... .+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceeccc
Confidence 9999998888889999999999999999999999999999999999999 6678899999999975322 11111 11
Q ss_pred eeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 292 LRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 292 ~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.+..| .-+-++.+.++.+++.|..+|.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~ 197 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 197 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence 11122 1122345788888888888774
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=239.88 Aligned_cols=186 Identities=19% Similarity=0.219 Sum_probs=154.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..++..||+|++... ......+.+.+|+++|+++ +||||+++++++...+.+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 5699999999999999999999999999999998653 2344567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++..+....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCcccccccccc
Confidence 99999999999998878899999999999999999999986 69999999999999 667889999999998664332
Q ss_pred ceeeeeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+..| . -+-++.+.++.+++.|+.+|..
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 2111111112 1 1123447788888888888753
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=236.24 Aligned_cols=180 Identities=25% Similarity=0.356 Sum_probs=147.3
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||+||+|.+..+++.||+|.+.+.........+.+..|+++|+.+ +|+||+++.+++.....+|+|||||++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 79999999999999999999999999765444444556788999999999 89999999999999999999999999999
Q ss_pred hHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-
Q 040003 216 LFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV- 290 (489)
Q Consensus 216 L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~- 290 (489)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+..+.....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCccccc
Confidence 9887743 3468999999999999999999999999999999999999 6678899999999987654432211
Q ss_pred -eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 291 -WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 -~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 111111 12223557888888888888764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=242.50 Aligned_cols=182 Identities=22% Similarity=0.299 Sum_probs=143.8
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHH-HHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR-IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+. +++.+ +||||+++++++.+.+..|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999999999999999997654333344455666665 56777 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
||+|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..........
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCccccc
Confidence 99999998887889999999999999999999999999999999999999 6778899999999876422211111
Q ss_pred eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 291 WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+..| + -+-++.++++.+++.|..+|..
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC
Confidence 111111 1 1122346777777777777654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=236.99 Aligned_cols=153 Identities=25% Similarity=0.385 Sum_probs=131.3
Q ss_pred cceeecceeccCCceEEEEEEEcC----------------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----------------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 191 (489)
+.|++.++||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+|.++ +||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD--ANKNARNDFLKEVKILSRL-KDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC--CCHHHHHHHHHHHHHHhhc-CCCCe
Confidence 469999999999999999997532 3457999998653 2344567789999999999 89999
Q ss_pred eEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 040003 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-------------------HYTERKAADLTRIIVGVVEACHSLGVMH 252 (489)
Q Consensus 192 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiH 252 (489)
+++++++.+....|+|||||.+|+|.+++.... .++...+..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999999886532 2566778899999999999999999999
Q ss_pred cCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 253 RDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 253 rDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||+|||+ +.++.+||+|||+++.+..+.
T Consensus 162 ~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~ 192 (304)
T cd05096 162 RDLATRNCLV---GENLTIKIADFGMSRNLYAGD 192 (304)
T ss_pred cCcchhheEE---cCCccEEECCCccceecccCc
Confidence 9999999999 667889999999998765544
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=256.79 Aligned_cols=193 Identities=23% Similarity=0.378 Sum_probs=164.3
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
-+..+.|.|+..||.|+||.||+|..+.++-..|.|+|.. ...+.++.++-||+||..+ +||+||+|++.|...+.
T Consensus 28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~C-dHP~ivkLl~ayy~enk 103 (1187)
T KOG0579|consen 28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENK 103 (1187)
T ss_pred CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCc
Confidence 3456779999999999999999999999998899999854 4577889999999999999 79999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+||+.|||.||-....+..- ..+.+.++..+++|++.||.|||+++|||||||..|||+ +.+|.|+|+|||++...
T Consensus 104 LwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~---TldGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 104 LWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL---TLDGDIRLADFGVSAKN 180 (1187)
T ss_pred eEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE---EecCcEeeecccccccc
Confidence 99999999999887766554 468999999999999999999999999999999999999 67788999999999876
Q ss_pred CCCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 283 RPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 283 ~~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
.........+ -+.|||...+...+.......|++..++|.-
T Consensus 181 ~~t~qkRDsF-IGTPYWMAPEVvmCET~KD~PYDykaDiWSl 221 (1187)
T KOG0579|consen 181 KSTRQKRDSF-IGTPYWMAPEVVMCETFKDQPYDYKADIWSL 221 (1187)
T ss_pred hhHHhhhccc-cCCcccccchheeeccccCCCchhhhhHHhh
Confidence 5443332222 2349999876666666777888888999953
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-30 Score=236.95 Aligned_cols=166 Identities=23% Similarity=0.432 Sum_probs=146.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|.++.+||+|+||.||+|.++.+|..+|||.+.. +.+++.+..||.||+++ +.|+||++||.|.....+||
T Consensus 32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-----~sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWI 105 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-----DTDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWI 105 (502)
T ss_pred HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-----cchHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEe
Confidence 4569999999999999999999999999999998853 45788999999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||..|+..+.+..+ +.+.+.++..+++..+.||+|||...-||||||..|||| +.+|..||+|||+|..+.+.
T Consensus 106 VMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred ehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhh
Confidence 99999999999998754 679999999999999999999999999999999999999 67889999999999887654
Q ss_pred CceeeeeeccCCCCcch
Q 040003 286 LTFRVWLRLHFLFFQKQ 302 (489)
Q Consensus 286 ~~~~~~~~~~ypf~~~~ 302 (489)
...+... -+.|||...
T Consensus 183 MAKRNTV-IGTPFWMAP 198 (502)
T KOG0574|consen 183 MAKRNTV-IGTPFWMAP 198 (502)
T ss_pred HHhhCcc-ccCcccccH
Confidence 4332211 234899873
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=242.53 Aligned_cols=182 Identities=23% Similarity=0.308 Sum_probs=142.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHH-HHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR-IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.+ +||||+++++++...+.+|+|||||.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 36999999999999999999999999997654333333344555554 45667 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce--ee
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF--RV 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~--~~ 290 (489)
+|+|.+++...+.+.+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++........ ..
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCCCcccc
Confidence 99999999888889999999999999999999999999999999999999 66788999999999764322111 11
Q ss_pred eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 291 WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.+..| .-+-++.++++.+++.|..+|..
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC
Confidence 111112 11223447777888888777654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=245.76 Aligned_cols=241 Identities=19% Similarity=0.241 Sum_probs=168.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCC-----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT-----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|.++++||+|+||.||+|.+... +..||||++... ......+.+.+|+++|+++..|||||++++++.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT--ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC--CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 35699999999999999999987533 346999998643 23445578899999999995599999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
...|||||||++|+|.+++...
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 9999999999999999988542
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC
Q 040003 224 --------------------------------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265 (489)
Q Consensus 224 --------------------------------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~ 265 (489)
..+++..+..++.|++.||.|||+.+|+||||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill--- 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL--- 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE---
Confidence 135667778899999999999999999999999999999
Q ss_pred CCCCCeEEEeeccccccCCCCceee---------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-
Q 040003 266 QEEAPLKTIDFGLSMFFRPGLTFRV---------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV- 326 (489)
Q Consensus 266 ~~~~~~kl~DFGla~~~~~~~~~~~---------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~- 326 (489)
+.++.+||+|||+++.+........ +....| .-+-++.+.++.+++. |..+++...-....
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 5677899999999987643221110 011111 1112344777777764 66666532211000
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-.+. +.+++..|++.|.+..++...|.++
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~l---i~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 351 NKIKSGYRMAKPDHATQEVYDI---MVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHhcCCCCCCCccCCHHHHHH---HHHHCccCHhHCcCHHHHHHHHHHH
Confidence 000000000111222222222 3356788888899999988888765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=246.96 Aligned_cols=187 Identities=20% Similarity=0.275 Sum_probs=144.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc-----CCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA-----GHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~~~~~ 201 (489)
.+.|++.++||+|+||+||+|.+..+++.||||+++.. .........|+++++.+. +|.+|+.++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 46799999999999999999999999999999998642 122345567888888772 234589999988764
Q ss_pred -CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCC-------------
Q 040003 202 -VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQ------------- 266 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~------------- 266 (489)
.++|||||++ |++|.+++.+.+.+++..+..++.||+.||.|||+ .|||||||||+|||+...+
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 5789999998 77999999888899999999999999999999998 5999999999999995422
Q ss_pred CCCCeEEEeeccccccCCCCceeeeeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 267 EEAPLKTIDFGLSMFFRPGLTFRVWLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+.+||+|||++........ ..+.+..| + -+-++.++++.+++.|+..|..
T Consensus 283 ~~~~vkl~DfG~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERHSRT-AIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred CCceEEECCCCccccCccccc-cccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 123599999998865432211 11122222 1 1234568899999999988864
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=238.68 Aligned_cols=186 Identities=24% Similarity=0.279 Sum_probs=148.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+.++||+|+||.||+|++..+++.||+|.+..... ......+.+|+++++++ +||||+++++++...+..|+|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEE
Confidence 459999999999999999999999999999999875432 12234567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+ +|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPT 158 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCCc
Confidence 999975 888877654 357889999999999999999999999999999999999 667889999999997653322
Q ss_pred cee--eeeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 287 TFR--VWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~~~--~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ...+..| .+ +-++.+.++.+++.|...|+..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 208 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGS 208 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 111 1111111 11 1234477888888888877654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-28 Score=240.40 Aligned_cols=186 Identities=23% Similarity=0.319 Sum_probs=148.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----Ce
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-----VA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~~ 203 (489)
+|++.++||+|+||.||+|++..+++.||||++.... ........+.+|+.+|+.+ +||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence 4899999999999999999999999999999986432 2233445788999999999 899999999988543 35
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+|||||. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 899999995 6899998887889999999999999999999999999999999999999 778899999999998653
Q ss_pred CCCcee-----eeeeccC-----------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLTFR-----VWLRLHF-----------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~~~-----~~~~~~y-----------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...... .+.+..| . -+-++.++++.+++.|+..|+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 221110 0111111 1 11235578888999998877653
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-28 Score=231.87 Aligned_cols=241 Identities=21% Similarity=0.236 Sum_probs=175.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|++..+++.||||.+.............+.+|+++++.+ +||||+++++++.+.+..|+||
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEEE
Confidence 599999999999999999999999999999998765445556667789999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~---~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE---cCCCCEEECccccceeccc
Confidence 99999999887753 2447889999999999999999999999999999999999 6678899999999987653
Q ss_pred CCceee------------e-eeccCC--CCcchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcch-hhhhhccHHHH
Q 040003 285 GLTFRV------------W-LRLHFL--FFQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDR-VIAESLSEEEI 345 (489)
Q Consensus 285 ~~~~~~------------~-~~~~yp--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~ 345 (489)
...... + ....+. -+.++.+.++.+++.|..++....-.... .+...... ......+.+-.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLR 238 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHH
Confidence 221110 0 011111 11123467778888877766432111000 00000000 00011122212
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
+. +-++++.+++.|++..|+...++.+.
T Consensus 239 ~l---i~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 239 EL---VSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HH---HHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 22 22577889999999999988887764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-28 Score=217.27 Aligned_cols=149 Identities=24% Similarity=0.351 Sum_probs=128.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.+.+..||.|+.|+|++++.+.+|...|||.+.+. ...++.+++++.+.++....+.|.||+.+|||..+..++|.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 45567899999999999999999999999999765 4566778999999998877568999999999999999999999
Q ss_pred ecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 210 LCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 210 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
.|. ..+..+++. .+.++|..+-.+...++.||.||.+ +||||||+||+|||+ |+.|++||||||++.++.+
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeec
Confidence 983 344444433 3679999999999999999999964 589999999999999 8999999999999987654
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=228.74 Aligned_cols=239 Identities=13% Similarity=0.109 Sum_probs=167.5
Q ss_pred cceeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
..|++.+.||+|+||.||+|.+. ..+..||+|.++.. ........+.+|+.+++.+ +||||+++++++......
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG--CSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC--CCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCc
Confidence 35999999999999999999865 34568999998653 2334456788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCccccccc
Confidence 9999999999999988764 578999999999999999999999999999999999999 667889999999876543
Q ss_pred CCCceee--------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHH
Q 040003 284 PGLTFRV--------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~--------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 345 (489)
....... +....| .-+-++.+.++.+++. |..+|......... .+.................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLH 238 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHH
Confidence 2211110 001111 1112234666666553 66555432111000 0000000001111222211
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+. +.+++..+++.+.+.+++...|.++
T Consensus 239 ~l---i~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QL---MLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HH---HHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11 2357788899999999998887653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=234.95 Aligned_cols=186 Identities=27% Similarity=0.401 Sum_probs=154.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+++|+++ +||||+++++++.+....|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEEE
Confidence 489999999999999999999999999999999765444445567889999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~~~- 156 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGRTY- 156 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCCCC-
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999987754421
Q ss_pred eeeeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 289 RVWLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| + -+-.+.+.++.+++.|..+|..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 200 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD 200 (290)
T ss_pred CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 11111111 1 1112346677788888776654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=238.14 Aligned_cols=185 Identities=21% Similarity=0.260 Sum_probs=148.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||+|.+..+++.||+|++..... ......+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEE
Confidence 569999999999999999999999999999999865432 12234567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||. ++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCCC
Confidence 99995 5787777654 568999999999999999999999999999999999999 677889999999997543211
Q ss_pred ce--eeeeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 287 TF--RVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~--~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ....+..| .+ +-++.+.++.+++.|..+|.+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 206 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPG 206 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 10 01111111 11 223457888888888888764
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=230.91 Aligned_cols=180 Identities=23% Similarity=0.326 Sum_probs=145.0
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||.||+++++.+|+.||+|.+.............+..|+++++++ +||||+++++++.+...+|+||||+.|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 79999999999999999999999999764443333344566799999999 89999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-ee
Q 040003 216 LFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-WL 292 (489)
Q Consensus 216 L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-~~ 292 (489)
|.+++...+ .+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++..+..+..... ..
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccCC
Confidence 988876543 47888889999999999999999999999999999999 6678899999999987754432221 11
Q ss_pred eccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 293 RLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 293 ~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+..| .-+-++.+.++.+++.|..+|..
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 1111 11223457888888888877653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=233.00 Aligned_cols=149 Identities=28% Similarity=0.440 Sum_probs=136.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+++++.+ +||||+++++++.....+|+||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEE
Confidence 488999999999999999999999999999998765433344566788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
||++|++|.+++...+.+++..+..++.+++.||.|||++||+||||||+||++ +..+.+||+|||+++.
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKI 150 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=226.55 Aligned_cols=241 Identities=20% Similarity=0.236 Sum_probs=177.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+++++++ +|+||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence 3599999999999999999999999999999998765444555567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+++++|..++.. ...+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||++..+.
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeecc
Confidence 999999999998854 2457899999999999999999999999999999999999 677889999999998764
Q ss_pred CCCcee--eeeecc-----------CC--CCcchhHHHHHHHhcccccCCCCCCCCCCCCCC----CcchhhhhhccHHH
Q 040003 284 PGLTFR--VWLRLH-----------FL--FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPP----IGDRVIAESLSEEE 344 (489)
Q Consensus 284 ~~~~~~--~~~~~~-----------yp--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 344 (489)
...... ...... |. -+.++.+.++.+++.|..++............. ..........+.+.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEEL 237 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHH
Confidence 332111 111111 11 122345778888888877765432110000000 00000001122222
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+. +-++++.+++.|++..++...|+.+
T Consensus 238 ~~~---i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 238 RDL---VSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred HHH---HHHHcCCCcccCCCHHHHHHHHHHh
Confidence 222 2357788899999999998888764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=253.79 Aligned_cols=151 Identities=25% Similarity=0.357 Sum_probs=133.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++.++||+|+||.||+|++..+++.||+|++...........+++.+|+++++++ +||||+++++++.+.+..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEE
Confidence 3599999999999999999999999999999999765444445567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 208 MELCAGGELFDRIIQR-----------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
||||+||+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEec
Confidence 9999999999988642 124456678899999999999999999999999999999 67788999999
Q ss_pred cccccc
Q 040003 277 GLSMFF 282 (489)
Q Consensus 277 Gla~~~ 282 (489)
|+|+..
T Consensus 158 GLAk~i 163 (932)
T PRK13184 158 GAAIFK 163 (932)
T ss_pred Ccceec
Confidence 999876
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=230.30 Aligned_cols=186 Identities=25% Similarity=0.345 Sum_probs=151.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.+ +|+||+.+++.+.+....|+|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEEE
Confidence 77788999999999999999999999999998765544444456678899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+.|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +..+.++|+|||++.....+..
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCCcc
Confidence 99999999888544 358899999999999999999999999999999999999 6678899999999987654332
Q ss_pred eee-eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... +.+..| . -+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~ 203 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 203 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 211 111111 1 1223447777888888777753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=246.43 Aligned_cols=235 Identities=18% Similarity=0.227 Sum_probs=170.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV----- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 202 (489)
++|.+.+.||+|+||+||+|++..+++.||||++..... .......+.+|+.+|..+ +|+||+++++.+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccCcc
Confidence 569999999999999999999999999999999976543 445667788999999999 8999999988775432
Q ss_pred ---eEEEEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 203 ---AVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
.+++||||+.+|+|.+++..+ ..+++..+..++.|++.||.|||++|||||||||+|||+ +.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCCEEEEe
Confidence 378999999999999988653 468999999999999999999999999999999999999 6678899999
Q ss_pred eccccccCCCCce----eeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhh
Q 040003 276 FGLSMFFRPGLTF----RVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIA 337 (489)
Q Consensus 276 FGla~~~~~~~~~----~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 337 (489)
||+++.+...... ....+..| ++. -++.+.++.+++.|..+|......... .+.......+.
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 266 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLP 266 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 9999876432111 11111122 111 234477888888888777643221100 00000000112
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
..++.+-...+. .++..|++.|++..++..
T Consensus 267 ~~~~~~l~~li~---~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 267 PSISPEMQEIVT---ALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCHHHHHHHH---HHcccChhhCcCHHHHHh
Confidence 233333333333 456778889999988754
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-27 Score=227.51 Aligned_cols=233 Identities=13% Similarity=0.087 Sum_probs=168.4
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----AVAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~lv~e 209 (489)
..||+|++|.||+|.. +|+.||+|.+...........+.+.+|+.+|+++ +|||||++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEE
Confidence 4699999999999987 6889999999765444444467788999999999 89999999999877 457899999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||.+|+|.+++...+.++......++.+++.|+.|||+ .+++||||||+|||+ +.++.+||+|||+++........
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~~~ 179 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPPFK 179 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccccc
Confidence 99999999999888889999999999999999999998 599999999999999 67788999999999865432211
Q ss_pred e---------eeeec---cC--CCCcchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchhhhhhccHHHHHHHHHHH
Q 040003 289 R---------VWLRL---HF--LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 289 ~---------~~~~~---~y--pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
. .++.+ .| .-+-++.+.++.+++.|..+|......... .+ ............+. ....+ +-
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~l~~l--i~ 256 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPL-EIKCI--VE 256 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcH-HHHHH--HH
Confidence 0 02211 12 222345578888888888777643211000 00 00000001111222 22222 12
Q ss_pred hhhcCCCCCCccHHHHHHHHHHh
Q 040003 353 KMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+++..|++.|.+.+|+...|..+
T Consensus 257 ~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 257 ACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HHhcCCcccCcCHHHHHHHHHHH
Confidence 56778888889999988877665
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-28 Score=243.06 Aligned_cols=142 Identities=20% Similarity=0.365 Sum_probs=129.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
...|++++.||+|+||.||+|++..+++.||+|.... ..+.+|+++|++| +|||||+++++|......++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEE
Confidence 3569999999999999999999999999999997532 3467899999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||++. ++|..++.....+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+|+..
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFP 232 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCccccc
Confidence 999995 6899998887889999999999999999999999999999999999999 66788999999999754
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=232.85 Aligned_cols=148 Identities=24% Similarity=0.363 Sum_probs=129.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcE--EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKE--FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.|++.+.||+|+||.||+|.+..++.. +|+|.+.. .........+.+|+.++.++.+||||+++++++...+..|+
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 488999999999999999998877765 46666542 23345567788999999999779999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC
Q 040003 207 VMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~ 270 (489)
||||+++++|.+++...+ .+++..+..++.|++.|++|||++||+||||||+|||+ +.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCCCc
Confidence 999999999999986543 46888999999999999999999999999999999999 66788
Q ss_pred eEEEeeccccc
Q 040003 271 LKTIDFGLSMF 281 (489)
Q Consensus 271 ~kl~DFGla~~ 281 (489)
+||+|||++..
T Consensus 163 ~kl~dfg~~~~ 173 (303)
T cd05088 163 AKIADFGLSRG 173 (303)
T ss_pred EEeCccccCcc
Confidence 99999999864
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=240.23 Aligned_cols=185 Identities=22% Similarity=0.304 Sum_probs=151.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----eE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-----AV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~ 204 (489)
|++++.||+|+||+||+|.+..+++.||+|.+... ........++.+|+.+|+.+ +||||+++++++.... ..
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceE
Confidence 77889999999999999999999999999998643 22334556788999999999 8999999999998776 89
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+||||+. ++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeeccc
Confidence 99999996 5888888777889999999999999999999999999999999999999 6778999999999986543
Q ss_pred CCcee---eeeecc------------C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 285 GLTFR---VWLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~~~---~~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..... .+.+.. | ..+-++.++++.+++.|+..|...
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 22110 011111 2 122345588899999998888653
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=227.98 Aligned_cols=240 Identities=21% Similarity=0.224 Sum_probs=175.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.+|||.+.............+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEE
Confidence 488899999999999999999999999999988765444455567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++.. ...+++..+..++.+++.||.|||++||+|+||||+||++ +.++.+||+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhcccc
Confidence 99999999998763 3458999999999999999999999999999999999999 6678899999999987654
Q ss_pred CCceee--eeeccC---------C----CCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCc---ch-hhhhhccHHHH
Q 040003 285 GLTFRV--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIG---DR-VIAESLSEEEI 345 (489)
Q Consensus 285 ~~~~~~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~ 345 (489)
...... .....| + -+..+.+.++.+++.|..+|...........+... .. ......+.+-.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHH
Confidence 322111 111111 1 12234477888888887776432211000000000 00 00011222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.. +-++++.|++.|+++.++...++++
T Consensus 239 ~l---i~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 239 QL---VNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HH---HHHhcCCCcccCCCHHHHHHHHhhh
Confidence 22 2256788889999999988887765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=228.37 Aligned_cols=186 Identities=24% Similarity=0.336 Sum_probs=150.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|+..+.||+|+||+||+|.+..+++.||+|.+.+...........+.+|+++|+.+ +|+||+.+++++...+..|+|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEE
Confidence 67788999999999999999999999999999765544444456678899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+.+++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCCCc
Confidence 99999998887654 358999999999999999999999999999999999999 6677899999999976543322
Q ss_pred eee-eee-----------ccCC--CCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WLR-----------LHFL--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~~-----------~~yp--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... +.+ ..|- -+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 111 111 1111 1123447777888888777653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=226.13 Aligned_cols=230 Identities=20% Similarity=0.272 Sum_probs=163.3
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|.+..+++.||+|.+... ........+.+|+++++.+ +||||+++++++......|+||||+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 3699999999999999999999999987543 2344556789999999999 899999999999999999999999999
Q ss_pred CchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 214 GELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 214 g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.....+.....
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccccCC
Confidence 99999987644 58899999999999999999999999999999999999 6677899999999986543221100
Q ss_pred eee--ccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHH-
Q 040003 291 WLR--LHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMF- 352 (489)
Q Consensus 291 ~~~--~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F- 352 (489)
... ..| .+ +-++.+.++.+++. |..++......... .+............+.. +.+++
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~li~ 230 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDA----VYRLME 230 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHH----HHHHHH
Confidence 000 001 01 11234677777775 66555422110000 00000000011112222 22222
Q ss_pred hhhcCCCCCCccHHHHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~ 373 (489)
+++..+++.|++.+|+..+|+
T Consensus 231 ~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 231 RCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHcCCChhhCcCHHHHHHHHh
Confidence 667788888999988877764
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=244.02 Aligned_cols=182 Identities=22% Similarity=0.278 Sum_probs=140.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
..|+++++||+|+||+||+|.+..+++.||||++.... ....+|+.+|+.+ +|||||+++++|...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEeecccccCC
Confidence 46999999999999999999999999999999885431 2345799999999 899999999887432
Q ss_pred --CeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 202 --VAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..+++|||||++ +|.+++.. ...+++..++.++.||+.||.|||++|||||||||+|||+.. ..+.+||+|
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--~~~~vkL~D 214 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKLCD 214 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--CCCceeeec
Confidence 257899999975 67666542 356899999999999999999999999999999999999932 234699999
Q ss_pred eccccccCCCCceee-e----------eec--cCC--CCcchhHHHHHHHhcccccCCCC
Q 040003 276 FGLSMFFRPGLTFRV-W----------LRL--HFL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 276 FGla~~~~~~~~~~~-~----------~~~--~yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
||+|+.+..+..... + +.+ .|. -+-++.++++.+++.|...|.+.
T Consensus 215 FGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 274 (440)
T PTZ00036 215 FGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQ 274 (440)
T ss_pred cccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987654332111 1 111 121 11234578888898888877654
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=250.87 Aligned_cols=149 Identities=30% Similarity=0.493 Sum_probs=127.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE------
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE------ 199 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~------ 199 (489)
....|+.++.||+||||.||+++++-+|+.||||+|.... .......+.+|+.+|++| +|||||+++..|.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCcc
Confidence 3456888999999999999999999999999999997653 455667899999999999 8999999987663
Q ss_pred --------------------------------------------------------------------------------
Q 040003 200 -------------------------------------------------------------------------------- 199 (489)
Q Consensus 200 -------------------------------------------------------------------------------- 199 (489)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -------------------------eC--------CeEEEEEeecCCCchHHHHHHcCCC--CHHHHHHHHHHHHHHHHH
Q 040003 200 -------------------------DA--------VAVHVVMELCAGGELFDRIIQRGHY--TERKAADLTRIIVGVVEA 244 (489)
Q Consensus 200 -------------------------~~--------~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~i~~~l~~ 244 (489)
.. ..+||-||||+...|.+++ .++.+ ....++.++++|+.||.|
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI-~~N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDII-RRNHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHH-HhcccchhhHHHHHHHHHHHHHHHH
Confidence 00 2478999999886665555 44455 377889999999999999
Q ss_pred HHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 245 lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|+.|||||||||.||+| +.+..|||+|||+|..
T Consensus 713 IH~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATD 746 (1351)
T ss_pred HHhCceeeccCCcceeEE---cCCCCeeecccccchh
Confidence 999999999999999999 7788899999999987
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=237.32 Aligned_cols=143 Identities=21% Similarity=0.318 Sum_probs=127.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++|++| +|+|||++++++...+..|+|
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEE
Confidence 359999999999999999999999999999996421 2356899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||++. ++|..++... +.+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++.+..
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceeccc
Confidence 99995 6888888654 468999999999999999999999999999999999999 6678899999999987643
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-29 Score=237.15 Aligned_cols=188 Identities=25% Similarity=0.390 Sum_probs=165.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+.-++||+||||.||-|+.+.||+.||+|.+.++++.....-...++|-.||.++ +.+.||.+-..|+..+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence 4577888999999999999999999999999999888777666667788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|..|.||+|.-+|...| .|++..++.++.+|+.||++||..+||.|||||+|||| |+.|+++|+|+|||..+..+
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence 99999999988887776 79999999999999999999999999999999999999 88999999999999999888
Q ss_pred Cceee-eeeccC-----------CCC--cchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV-WLRLHF-----------LFF--QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~-~~~~~y-----------pf~--~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... +.+.+| .|. .+..++++++++.|.-+|..
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 76655 555554 222 13448999999999888764
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=233.91 Aligned_cols=239 Identities=15% Similarity=0.177 Sum_probs=167.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcE----EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKE----FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
..|++.+.||+|+||.||+|.+..++.. ||+|++... ......+.+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-C
Confidence 3599999999999999999998766654 899988532 2344567788999999999 899999999998765 5
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++|+||+.+|+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccccc
Confidence 78999999999999998764 458888899999999999999999999999999999999 66778999999999977
Q ss_pred CCCCceeee----eeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCCC-CCCCcchhhhhhccHH
Q 040003 283 RPGLTFRVW----LRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKVA-VPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~~----~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 343 (489)
......... .+..| ++ +-++.+.++.+++. |..++.+........ +............+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 239 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHH
Confidence 543321110 00011 11 12334667777765 666665432211000 0000000001111222
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.. .-+..++..|++.|.+..++...+..+.
T Consensus 240 ~~---~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 240 VY---MIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred HH---HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 21 2234567778888999999888776653
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=229.97 Aligned_cols=185 Identities=19% Similarity=0.237 Sum_probs=152.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++.+..++..+|+|.+... ........+.+|+++++++ +||||+++++++.+.+.+|+||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE--IKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc--cCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEe
Confidence 489999999999999999999999999999998643 2344556788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+++++|.+++...+.+++..+..++.|++.||.|||+ .+|+||||||+|||+ +.++.+||+|||++........
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE---ecCCcEEEccCCCccccccccc
Confidence 999999999999888889999999999999999999997 699999999999999 6677899999999876543221
Q ss_pred eeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| .-+-++.+.++.+++.|..+|+.
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 111111111 11123457788888888887753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=229.50 Aligned_cols=238 Identities=19% Similarity=0.226 Sum_probs=170.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||+|.+...+ ..||+|.+... ........+.+|+.+++.+ +||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~--~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN--AEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC--CCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCC
Confidence 35889999999999999999876655 67999988643 2344566789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC
Q 040003 203 AVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ 266 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~ 266 (489)
..|++|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~---~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---G 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE---c
Confidence 999999999999999998764 457788899999999999999999999999999999999 6
Q ss_pred CCCCeEEEeeccccccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-C
Q 040003 267 EEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-A 327 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~ 327 (489)
.++.+||+|||+++.......... ..+..| .+ +-++.+.++.+++. |..+|.+....+.. .
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 677899999999986543322111 111111 11 11244677777775 65555432211100 0
Q ss_pred CCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 328 VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+.+..........+.+-.+. +..+++.|++.|.+..|+...|+.
T Consensus 239 i~~~~~~~~~~~~~~~~~~l---~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IRSRQLLPCPEDCPARVYAL---MIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcCCCcccCCHHHHHH---HHHHccCChhhCcCHHHHHHHHhc
Confidence 00000001111222222222 236788899999999999888764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=228.16 Aligned_cols=185 Identities=21% Similarity=0.296 Sum_probs=139.8
Q ss_pred ceeecceeccCCceEEEEEEEcC-CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEE-----e
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKA-TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYE-----D 200 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~-----~ 200 (489)
.|++.+.||+|+||+||+|++.. +++.||+|.+...... ......+.+|+.+++.+. +||||+++++++. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 59999999999999999999854 4688999998754322 222345667888887763 5999999999885 3
Q ss_pred CCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
...+++||||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccccc
Confidence 456899999996 5898888653 358899999999999999999999999999999999999 6678899999999
Q ss_pred ccccCCCCceee-eeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 279 SMFFRPGLTFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 279 a~~~~~~~~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
++.......... ..+..| .-+-++.+.++.+++.|...|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 987653321111 111111 1222344667777777766654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=234.31 Aligned_cols=187 Identities=19% Similarity=0.302 Sum_probs=147.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|++.+.. ........+.+|+.+++.+ +||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCcc
Confidence 4467999999999999999999999999999999986542 2344556788999999999 8999999999986543
Q ss_pred ---eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 ---AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.+|+||||+.+ +|...+. ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~a 170 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 170 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCCc
Confidence 57999999965 5666553 358889999999999999999999999999999999999 67789999999999
Q ss_pred cccCCCCcee-eeeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFR-VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~-~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+......... ...+..| .-+-++.+.++.+++.|...|...
T Consensus 171 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 171 RTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 7654322111 1111112 112235578888999888887643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=235.25 Aligned_cols=240 Identities=21% Similarity=0.247 Sum_probs=163.9
Q ss_pred cceeecceeccCCceEEEEEEE-----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE-----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 201 (489)
++|++++.||+|+||.||+|.+ ..+++.||||+++... .......+.+|+.+|.++.+||||+++++++.. .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 5699999999999999999985 3467899999986532 234456788999999999778999999998765 4
Q ss_pred CeEEEEEeecCCCchHHHHHHcC---------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG--------------------------------------------------------- 224 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 224 (489)
..+++|||||.+|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56899999999999999886421
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceeee---
Q 040003 225 ----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW--- 291 (489)
Q Consensus 225 ----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~--- 291 (489)
.++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcchhhcCCC
Confidence 25667778899999999999999999999999999999 66788999999999875432221110
Q ss_pred ------------eeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhh
Q 040003 292 ------------LRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKM 354 (489)
Q Consensus 292 ------------~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 354 (489)
....|. -+-++.+.++.+++. |..+++........ .+............+.+. ..-+..+
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~c 318 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---YQTMLDC 318 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHH---HHHHHHH
Confidence 011110 011233666777764 66555432111000 000000000011122221 2233456
Q ss_pred hcCCCCCCccHHHHHHHHHHh
Q 040003 355 IDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 355 ~D~d~~g~i~~~el~~~l~~l 375 (489)
+..|+..|.+..|+...|..+
T Consensus 319 l~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 319 WHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred ccCChhhCcCHHHHHHHHHHH
Confidence 777888888888887777654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-27 Score=225.74 Aligned_cols=238 Identities=20% Similarity=0.222 Sum_probs=168.0
Q ss_pred eeecceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe---
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA--- 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~--- 203 (489)
|.+++.||+|+||.||+|.... ++..||+|.+.... ........+.+|+.+++.+ +||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCcccc
Confidence 5678899999999999998765 34789999987543 2345567889999999999 89999999998865544
Q ss_pred ---EEEEEeecCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 204 ---VHVVMELCAGGELFDRIIQR------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 204 ---~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
.++||||+.+|+|..++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEEC
Confidence 79999999999999888542 358889999999999999999999999999999999999 667889999
Q ss_pred eeccccccCCCCceee--------------eee-ccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchh
Q 040003 275 DFGLSMFFRPGLTFRV--------------WLR-LHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRV 335 (489)
Q Consensus 275 DFGla~~~~~~~~~~~--------------~~~-~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~ 335 (489)
|||+++.+........ .+. ..+ .-+-++.+.++.+++. |..+|......... .+..-....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK 235 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9999987654332211 010 111 1222345778888876 66666543211100 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.......+-.+.+. +++..|++.|++..|+...|..+
T Consensus 236 ~~~~~~~~~~~li~---~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMY---SCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHhh
Confidence 11222333333333 46778888889999888877654
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=224.16 Aligned_cols=190 Identities=27% Similarity=0.342 Sum_probs=150.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCC----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~ 202 (489)
..|+++..||+|+||.||+|..+.++ +.+|||.++..+-.+ .-.....||+.+++.| +|||||.+..+|.. +.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLREL-KHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHh-cCCcchhHHHHHhccCc
Confidence 45999999999999999999766543 378999987543222 2224667999999999 79999999999877 88
Q ss_pred eEEEEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEee
Q 040003 203 AVHVVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDF 276 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DF 276 (489)
.+|+++||.+. +|.+.|..+ ..++...++.++.||+.|+.|||++=|+||||||+|||+..+ .+.|.|||+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999999976 888888643 358889999999999999999999999999999999999643 35689999999
Q ss_pred ccccccCCCCcee-----eee------------eccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 277 GLSMFFRPGLTFR-----VWL------------RLHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 277 Gla~~~~~~~~~~-----~~~------------~~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+|+.+.....-- ++. ..+| ..+.+..+|||.+++.-++-|..+
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9999987543211 122 2334 233455699999999988888654
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=223.95 Aligned_cols=185 Identities=23% Similarity=0.268 Sum_probs=151.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
...|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEE
Confidence 346999999999999999999999999999999986432 23345678999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeecccc
Confidence 99999999999999877889999999999999999999999999999999999999 667889999999998764322
Q ss_pred ceee--eeeccC------------C----CCcchhHHHHHHHhcccccCC
Q 040003 287 TFRV--WLRLHF------------L----FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 287 ~~~~--~~~~~y------------p----f~~~~~~~~~~~i~~~~~~~~ 318 (489)
.... ..+..| + -+-++.+.++.+++.|..++.
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~ 210 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 1110 111111 1 112345778888888877664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-27 Score=222.98 Aligned_cols=187 Identities=26% Similarity=0.348 Sum_probs=153.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC--HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT--EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|.+....... ......+.+|+++++++ +||||+++++++.+....|+
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEEE
Confidence 4889999999999999999999999999999987543222 23456788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||+++.+....
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceeccccc
Confidence 99999999999999888889999999999999999999999999999999999999 667889999999997654321
Q ss_pred ceee---------------eeec-cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV---------------WLRL-HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~---------------~~~~-~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ++.+ .+ .-+-++.+.++.+++.|+.+|..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 209 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE 209 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 1100 1111 11 11223457888999998877653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=225.28 Aligned_cols=236 Identities=19% Similarity=0.214 Sum_probs=172.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+++++.+ +||||+++++++.....+++||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEEE
Confidence 488899999999999999999999999999998643 23456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+.+++|.+++... ..+++..+..++.|++.+|.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccce
Confidence 999999999998654 357888999999999999999999999999999999999 667889999999998765432
Q ss_pred ceee---eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 287 TFRV---WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 287 ~~~~---~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
.... .....| ++ +-++.+.++.+++. |..+++........ .+............+.+..+.+
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 238 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELM 238 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 2110 001112 11 11244778888886 77776543221100 0000000011112223322222
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-++++.|++.|++..++.+.|..+
T Consensus 239 ---~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 239 ---RACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---HHHccCCcccCCCHHHHHHHHHhh
Confidence 266778888999999998877653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-27 Score=226.12 Aligned_cols=237 Identities=21% Similarity=0.238 Sum_probs=166.6
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.+.||+|+||.||+|.+.. +++.||+|.+.... .....+.+.+|+++|+.+ +|+||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNF-QHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhc-CCCCchheeeEEecCC
Confidence 358899999999999999998753 46789999986532 233457899999999999 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRG--------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
..|+||||+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCC
Confidence 9999999999999999987542 36788899999999999999999999999999999999 667
Q ss_pred CCeEEEeeccccccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCC
Q 040003 269 APLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVP 329 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~ 329 (489)
+.+||+|||+++.......... .....| ++ +-++.+.++.+++. |..+|....-.... .+.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 8999999999986533221110 000111 11 11244677777776 76665422110000 000
Q ss_pred CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 330 PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
...........+.+..+. +-+++..|++.|++..|+...|.
T Consensus 239 ~~~~~~~~~~~~~~~~~l---i~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 QGRLLQRPRTCPSEVYDI---MLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred cCCcCCCCCCCCHHHHHH---HHHHcCCCcccCCCHHHHHHHhh
Confidence 000000111222222222 23567788888888888877663
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=221.41 Aligned_cols=150 Identities=27% Similarity=0.502 Sum_probs=134.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.++||+|+||.||++.+..+++.||+|.+.... .....+.+.+|+.+++.+ +|+||+++++++.+...+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 3888999999999999999999999999999986432 234567788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+|||+ +.++.++|+|||++.....
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTS 152 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeecc
Confidence 999999999988643 357899999999999999999999999999999999999 6678899999999987643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=232.94 Aligned_cols=240 Identities=21% Similarity=0.267 Sum_probs=167.9
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 201 (489)
++|++.+.||+|+||.||+|++.. +++.||+|++.... .....+.+.+|+.++.++.+|+||+++++++.. .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 469999999999999999997543 45789999986432 234456788999999999779999999998764 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------------------------------------------------
Q 040003 202 VAVHVVMELCAGGELFDRIIQR---------------------------------------------------------- 223 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------------------------- 223 (489)
..++++|||+.+++|.+++...
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 6789999999999999988542
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC
Q 040003 224 ---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF 296 (489)
Q Consensus 224 ---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y 296 (489)
..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+........ .....|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 256788899999999999999999999999999999999 5677899999999987643221110 001111
Q ss_pred ---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCC
Q 040003 297 ---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNS 360 (489)
Q Consensus 297 ---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~ 360 (489)
++ +.++.++++.+++. |..+|......... .+............+.+-.+. +..++..++.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~cl~~~p~ 318 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSI---MLDCWHNNPE 318 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHH---HHHHccCChh
Confidence 11 22345788888875 87776542211100 000000001111122222222 2356778888
Q ss_pred CCccHHHHHHHHHHh
Q 040003 361 GYITLEELKKGLQRV 375 (489)
Q Consensus 361 g~i~~~el~~~l~~l 375 (489)
.|.+.+|+...|..+
T Consensus 319 ~RPs~~ell~~l~~~ 333 (337)
T cd05054 319 DRPTFSELVEILGDL 333 (337)
T ss_pred hCcCHHHHHHHHHHH
Confidence 899999988877654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=224.47 Aligned_cols=183 Identities=21% Similarity=0.273 Sum_probs=142.5
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh--cCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL--AGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l--~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||++.+..+++.+|+|.+.+.............+|..+++.+ .+||||+.+++++...+..|+||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999999765443333333344555444433 269999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceeeee
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWL 292 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~~ 292 (489)
+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.............
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVG 157 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccCccCcCC
Confidence 99999999888889999999999999999999999999999999999999 677889999999997654322211111
Q ss_pred ecc------------CC--CCcchhHHHHHHHhcccccCCCC
Q 040003 293 RLH------------FL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 293 ~~~------------yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.. |. .+-++.+.++.+++.|..+|...
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 199 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence 111 11 12234477888888888877543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=225.64 Aligned_cols=148 Identities=38% Similarity=0.650 Sum_probs=133.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++++.||+|+||+||+|.+..+++.||+|++..... .........+|+.+++++ +||||+++++++.+....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI-EEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH-HHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc-cccccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 7889999999999999999999999999999976532 122233445699999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+.+++|.+++...+.++...+..++.|++.||.+||++||+||||||+|||+ +.++.++|+|||++...
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKL 148 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEES
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence 99999999999878899999999999999999999999999999999999999 67888999999999864
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=245.06 Aligned_cols=233 Identities=22% Similarity=0.342 Sum_probs=169.7
Q ss_pred eeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
....+.||+|+||+||+|.... ....||||.++.. ...+..++|+||+++|..| +|||||+|+|.+..++.+
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAEL-QHPNIVRLLGVCREGDPL 564 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCCee
Confidence 4557889999999999997543 3467999998654 3455788999999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC
Q 040003 205 HVVMELCAGGELFDRIIQRG--------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~ 270 (489)
|+|+|||..|||.++|..++ .++..+...|+.||+.|++||-++.+|||||-..|+|+ .++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---ccceE
Confidence 99999999999999997542 16778899999999999999999999999999999999 78899
Q ss_pred eEEEeeccccccCCCCceeeeeeccCC-CCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcc------------hh--
Q 040003 271 LKTIDFGLSMFFRPGLTFRVWLRLHFL-FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGD------------RV-- 335 (489)
Q Consensus 271 ~kl~DFGla~~~~~~~~~~~~~~~~yp-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------------~~-- 335 (489)
|||+||||++.+...+.+..-...--| -|.. -+.|+.|++.-.+|+|..-..+..+-. ..
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMp-----pEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMP-----PESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCC-----HHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 999999999987766655431011112 1122 123445555555555533221100000 00
Q ss_pred ---------hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 336 ---------IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 336 ---------~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.+++... ++..| +-.++..++..|.+..|+...|+...
T Consensus 717 ~i~~g~lL~~Pe~CP~-~vY~L--M~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 717 CIRAGQLLSCPENCPT-EVYSL--MLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred HHHcCCcccCCCCCCH-HHHHH--HHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 0111122 22222 23567788889999999999988865
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=223.46 Aligned_cols=181 Identities=21% Similarity=0.226 Sum_probs=147.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|++..+++.||+|.+.... .......+.+|+++++++ +||||+++++++......++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEE
Confidence 4788899999999999999999999999999986542 334456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||+ +.++.+||+|||++..+......
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~~~~ 151 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNSIAK 151 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceeccccccc
Confidence 99999988644 357889999999999999999999999999999999999 67788999999999876443221
Q ss_pred eeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 289 RVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....+..| .-+-++.+.++.+++.|..+|..
T Consensus 152 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 11111111 11223457888889888887753
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-27 Score=227.39 Aligned_cols=233 Identities=18% Similarity=0.200 Sum_probs=170.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||.||+|.+..+++.||+|.+... ........+.+|+.+++++ +||||+++++++...+..|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEE
Confidence 488999999999999999999999999999998643 2344557888999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||++++|..++... ..+++..+..++.+++.||.|||+ .||+||||||+||++ +.++.+||+|||++..+..
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE---CCCCCEEEeecCCcccccC
Confidence 999999998877653 378999999999999999999997 599999999999999 6678899999999976643
Q ss_pred CCceeeeeeccC-------------------CCCcchhHHHHHHHhcccccCCCCCCCCCC-C---CCCCcchhhhhhcc
Q 040003 285 GLTFRVWLRLHF-------------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-A---VPPIGDRVIAESLS 341 (489)
Q Consensus 285 ~~~~~~~~~~~y-------------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~ 341 (489)
...........| .-+-++.+.++.+++.|..+|....+.... . +.......+...++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd06622 156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYS 235 (286)
T ss_pred CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccC
Confidence 222111111111 012234578888999998887654322110 0 00000001111233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+....+. +++..+++++++.+++..
T Consensus 236 ~~~~~li~---~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 236 DDAQDFVA---KCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHH---HHcccCcccCCCHHHHhc
Confidence 33333333 456677888888877754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=223.10 Aligned_cols=236 Identities=18% Similarity=0.167 Sum_probs=165.0
Q ss_pred ceeecceeccCCceEEEEEEEc----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEK----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.|++.+.||+|+||+||+|... .+++.||+|.+... ........+.+|+++++.+ +||||+++++++......
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCce
Confidence 4888999999999999999853 45678999998643 3345557788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 205 HVVMELCAGGELFDRIIQRG-----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
|+||||+.+++|.+++.... .+++..+..++.+++.||.|||++||+||||||+|||+ +.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---cC
Confidence 99999999999999885332 36778888999999999999999999999999999999 66
Q ss_pred CCCeEEEeeccccccCCCCceee--------------eee-ccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV--------------WLR-LHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~--------------~~~-~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||+++.......... ++. ..| --+-++.+.++.+++. |..+|....-.... .+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 77899999999987643321110 000 111 0111234667777776 66555332100000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
............+.+....+ -.+++.|+..|++..++...|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li---~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 240 RKRQLLPCSEDCPPRMYSLM---TECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HcCCcCCCCCCCCHHHHHHH---HHHcccCcccCcCHHHHHHHhh
Confidence 00000001112222222222 2567888899999998877664
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-27 Score=226.54 Aligned_cols=153 Identities=27% Similarity=0.418 Sum_probs=133.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||++.+.... ..+|+|.+... ........+.+|+.+++.+.+|+||+++++++...+
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC--CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 45999999999999999999876443 78999988643 234455678899999999967999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC
Q 040003 203 AVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ 266 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~ 266 (489)
.+|+||||+.+|+|..++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~---~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV---T 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE---c
Confidence 999999999999999998642 357888999999999999999999999999999999999 6
Q ss_pred CCCCeEEEeeccccccCCC
Q 040003 267 EEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~ 285 (489)
.++.+||+|||+++.+...
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~ 185 (293)
T cd05053 167 EDHVMKIADFGLARDIHHI 185 (293)
T ss_pred CCCeEEeCccccccccccc
Confidence 6788999999999876543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=219.44 Aligned_cols=150 Identities=24% Similarity=0.379 Sum_probs=133.1
Q ss_pred cceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++.+.||+|+||+||+|.+..+ ...||+|.+... ........+.+|+.+++.+ +||||+++++++......
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG--SSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCC--CChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCce
Confidence 3589999999999999999988654 457999988643 2344556788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+.+++|.+++... +.++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhccc
Confidence 9999999999999998664 578999999999999999999999999999999999999 667889999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-27 Score=250.91 Aligned_cols=237 Identities=22% Similarity=0.295 Sum_probs=170.9
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~ 204 (489)
.+.|+++++||+|+||+||+|.+..++..||+|++..... .......+.+|+.+|+.| +|||||+++++|.+ ...+
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCCCEE
Confidence 4569999999999999999999999999999999876543 344567889999999999 89999999999854 4579
Q ss_pred EEEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCCEeeeeC--------
Q 040003 205 HVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSL-------GVMHRDLKPENFLFINQ-------- 265 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~-------~iiHrDlKp~Nill~~~-------- 265 (489)
|||||||.+|+|.++|... +.+++..++.|+.||+.||.|||+. +||||||||+||||...
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999988652 5799999999999999999999985 49999999999999532
Q ss_pred ------CCCCCeEEEeeccccccCCCCceee-eeecc-------------C--CCCcchhHHHHHHHhcccccCCCCCCC
Q 040003 266 ------QEEAPLKTIDFGLSMFFRPGLTFRV-WLRLH-------------F--LFFQKQRQSVLQTRLVRNLNEPGSLWP 323 (489)
Q Consensus 266 ------~~~~~~kl~DFGla~~~~~~~~~~~-~~~~~-------------y--pf~~~~~~~~~~~i~~~~~~~~~~~~~ 323 (489)
+....+||+|||++..+........ +.+.. | ..+.++.++++.+++.|..+|....-.
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~ 249 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF 249 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH
Confidence 2234599999999987643221111 11111 1 123356688999999999888532110
Q ss_pred CCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 324 DKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 324 ~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
... .+... ........+.+-...|. .++..++..+++..|+.
T Consensus 250 ~qli~~lk~~-p~lpi~~~S~eL~dLI~---~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 250 SQLISELKRG-PDLPIKGKSKELNILIK---NLLNLSAKERPSALQCL 293 (1021)
T ss_pred HHHHHHHhcC-CCCCcCCCCHHHHHHHH---HHhcCChhHCcCHHHHh
Confidence 000 00000 00000112222222222 56788888999998876
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=231.06 Aligned_cols=188 Identities=24% Similarity=0.291 Sum_probs=160.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|..+.+||+|+||+|.+|..+.+.+.||||++++..+....+++--..|-++|+-..+-|.++++..+|+..+.+|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 47888999999999999999999999999999998877777778888889999987767889999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.||+|.-++.+-|++.+..+..++..|+.||-+||++|||.||||.+|||| +.+|++||+|||+++.-.-+...
T Consensus 430 EyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred EEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCcc
Confidence 999999999999999999999999999999999999999999999999999999 88999999999999865433332
Q ss_pred ee--eeecc-----------C----CCCcchhHHHHHHHhcccccCCCCC
Q 040003 289 RV--WLRLH-----------F----LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 289 ~~--~~~~~-----------y----pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+. ..+.. | .||. .+.++.+++.|+.+|.++.
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa--~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWA--FGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHH--HHHHHHHHHcCCCCCCCCC
Confidence 22 22222 2 3333 3667777777777777654
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=222.58 Aligned_cols=236 Identities=23% Similarity=0.317 Sum_probs=169.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC---HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT---EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
|+..+.||+|+||.||+|.+..+++.||+|++....... ....+.+.+|+.+++.+ +|+||+++++++.+.+..++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEEE
Confidence 778899999999999999999999999999987543221 23457889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~DFGla~~~~~~ 285 (489)
||||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.+ ..+||+|||++..+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~---~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI---DSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEEcccccccccccc
Confidence 99999999999999887889999999999999999999999999999999999999 434 35999999999876543
Q ss_pred Ccee------eeeeccC-----------C--CCcchhHHHHHHHhcccccCCCCCCCCCCC-CCCCcchhhhhhccHHHH
Q 040003 286 LTFR------VWLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPGSLWPDKVA-VPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 286 ~~~~------~~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 345 (489)
.... .+.+..| . -+-++.+.++.+++.|..+|....+..... +...........+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 1100 0111111 1 112344778888888888775433221110 000000000011111111
Q ss_pred HHHHHHH-hhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMF-KMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F-~~~D~d~~g~i~~~el~ 369 (489)
..+.+++ ++++.+++.|++..|+.
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHh
Confidence 2233333 56778888888888764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=228.89 Aligned_cols=233 Identities=19% Similarity=0.249 Sum_probs=174.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+||.+.||++..- +...||+|.+... ..+...+..+++||.+|.+|++|.+||+|++|-..++.+|+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4999999999999999999754 4457787776543 3567778899999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHY-TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||- ..+|...|.++... +...++.++.|++.++.++|.+||||.||||+|+|+. .|.+||+|||+|..+....+
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred ecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCcccc
Confidence 974 56999999877554 4468889999999999999999999999999999994 57899999999998876543
Q ss_pred ee----eeeeccC------------------------CCCcchhHHHHHHHhcccccCCCCC--CCCCCCCCCCcchhhh
Q 040003 288 FR----VWLRLHF------------------------LFFQKQRQSVLQTRLVRNLNEPGSL--WPDKVAVPPIGDRVIA 337 (489)
Q Consensus 288 ~~----~~~~~~y------------------------pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 337 (489)
-- .+++..| |-+.|+-+||++.++.|+.+|-.-. |....++....-.+-.
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Ief 594 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEF 594 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccc
Confidence 21 1444444 5566777999999999998886432 2111111111111111
Q ss_pred hhccHHH-HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 338 ESLSEEE-IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 338 ~~~~~~~-~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
..+++.. +-.+ +=.|+-.|++.|++..||.+
T Consensus 595 p~~~~~~~li~~--mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 595 PDIPENDELIDV--MKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cCCCCchHHHHH--HHHHHhcCcccCCCcHHHhc
Confidence 1122211 2222 22567788888999999854
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-26 Score=222.15 Aligned_cols=238 Identities=20% Similarity=0.219 Sum_probs=168.4
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
..|.+.+.||+|+||.||++.+. .++..+|+|.+... .......+.+|+++++++ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence 45899999999999999999853 34567999988542 344567789999999999 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRG-------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~ 269 (489)
..|+||||+.+++|.+++...+ .+++..+..++.|++.||+|||++||+||||||+|||+ +.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCC
Confidence 9999999999999999987543 38999999999999999999999999999999999999 6678
Q ss_pred CeEEEeeccccccCCCCceee--------------eee-ccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCC
Q 040003 270 PLKTIDFGLSMFFRPGLTFRV--------------WLR-LHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPP 330 (489)
Q Consensus 270 ~~kl~DFGla~~~~~~~~~~~--------------~~~-~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~ 330 (489)
.+||+|||+++.......... ++. ..+. .+-++.+.++.+++. |..+|....-.... .+..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 899999999986543322111 011 1111 112344677777776 66655422110000 0000
Q ss_pred CcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 331 IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..........+.+ +. .-+.+++..|+..|++..|+...|..+
T Consensus 238 ~~~~~~~~~~~~~-l~--~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 238 GRVLQRPRTCPKE-VY--DLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred CCcCCCCCCCCHH-HH--HHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 0000011122222 11 123367788888889998887777665
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=226.39 Aligned_cols=185 Identities=23% Similarity=0.272 Sum_probs=147.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|++..+++.||+|.+..... ......+.+|+.+++.+ +||||+++++++......|+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999865432 22234567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+. ++|..++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCCC
Confidence 99997 5888887654 468899999999999999999999999999999999999 667889999999997653221
Q ss_pred ce--eeeeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 287 TF--RVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~--~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. ....+..| ++ +-++.+.++.+++.|...|+.
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~ 207 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPG 207 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 11111111 11 123446778888888877754
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=251.90 Aligned_cols=153 Identities=27% Similarity=0.430 Sum_probs=140.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.++++||+|+||+||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++++.....+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEE
Confidence 4599999999999999999999999999999999876555566677899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||.|++|.+++...+.+++..++.++.||+.||.|||.+|||||||||+|||+ +.++.+||+|||+++....
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSKVTLN 156 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCccccC
Confidence 9999999999999887889999999999999999999999999999999999999 6678899999999987643
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-27 Score=226.95 Aligned_cols=238 Identities=18% Similarity=0.177 Sum_probs=166.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc--EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK--EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.|++.+.||+|+||.||+|+...++. .+++|.++. .......+.+.+|++++.++.+||||+++++++......|+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE--FASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc--cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 58999999999999999999877765 468887753 23344567789999999999679999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC
Q 040003 207 VMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP 270 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~ 270 (489)
||||+++++|.+++.... .+++..+..++.|++.||+|||++||+||||||+|||+ +.++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCCe
Confidence 999999999999986532 47788999999999999999999999999999999999 66788
Q ss_pred eEEEeeccccccCCCCcee-e-----------eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcch
Q 040003 271 LKTIDFGLSMFFRPGLTFR-V-----------WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDR 334 (489)
Q Consensus 271 ~kl~DFGla~~~~~~~~~~-~-----------~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~ 334 (489)
+||+|||++.......... . .....|. -+-++.+.++.+++. |..+|......... .+......
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~ 237 (297)
T cd05089 158 SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM 237 (297)
T ss_pred EEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC
Confidence 9999999986432110000 0 0011110 111244777888875 77766543221100 00000000
Q ss_pred hhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 335 ~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.....++.+-.+. +.+++..++..|.+.+++...|..
T Consensus 238 ~~~~~~~~~~~~l---i~~~l~~~p~~Rp~~~~i~~~l~~ 274 (297)
T cd05089 238 EKPRNCDDEVYEL---MRQCWRDRPYERPPFAQISVQLSR 274 (297)
T ss_pred CCCCCCCHHHHHH---HHHHcCCChhhCcCHHHHHHHHHH
Confidence 0111222222222 336778888889999888666544
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=219.53 Aligned_cols=232 Identities=20% Similarity=0.235 Sum_probs=163.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||++.... +..+|+|.+..... ....+.+|+.+|+.+ +||||+++++++......|+||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAM----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCc----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEE
Confidence 48889999999999999998754 56799998764322 235678899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+++|+|.+++... +.+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||+++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCce
Confidence 999999999988653 568899999999999999999999999999999999999 6678899999999986543222
Q ss_pred eee-------------ee-eccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 288 FRV-------------WL-RLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 288 ~~~-------------~~-~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
... ++ ...|. -+-++.+.++.+++. |..+|....-.... .+............+. .+..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~-- 232 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASM-TVYE-- 232 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH-HHHH--
Confidence 111 00 01110 111233667777776 66666432211000 0000000001111122 2211
Q ss_pred HHHhhhcCCCCCCccHHHHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l 372 (489)
-+-+++..++++|.+.+|+...|
T Consensus 233 li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 233 VMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHccCCcccCcCHHHHHHhh
Confidence 22357888899999999887654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=224.98 Aligned_cols=187 Identities=26% Similarity=0.368 Sum_probs=155.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+++++++ +||||+++++++.+....|+|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEEe
Confidence 88999999999999999999999999999999876555545678899999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
|+.|++|.+++.....+++..+..++.|++.+|.|||++||+|+||||+||++ +.++.++|+|||++..........
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~~ 157 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLTT 157 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCcccc
Confidence 99999999999877789999999999999999999999999999999999999 677889999999998765442211
Q ss_pred e-eeeccC-------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 290 V-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 290 ~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. .....| --+-.+.+.++.+++.|..++...
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 202 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGH 202 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCC
Confidence 1 111111 111123467777788777766543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=225.60 Aligned_cols=185 Identities=21% Similarity=0.297 Sum_probs=141.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEe-----C
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYED-----A 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~-----~ 201 (489)
.|++.+.||+|+||+||+|+++.+++.||+|.+...... ......+.+|+++++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 388999999999999999999999999999998754322 112234567888777763 69999999998864 3
Q ss_pred CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...++||||+.+ +|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcc
Confidence 468999999975 888887653 348999999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceee-eeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 280 MFFRPGLTFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
+.+........ ..+..| .-+-++.+.++.+++.|...|.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 87653322111 111111 1222344777777777766654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-27 Score=228.04 Aligned_cols=151 Identities=26% Similarity=0.411 Sum_probs=131.1
Q ss_pred cceeecceeccCCceEEEEEEEcCC-------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT-------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.|.+++.||+|+||.||+|.+... ...+|+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 4599999999999999999986542 3469999986532 234556788999999999779999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+..|+||||+.+|+|.+++...+ .++...+..++.|++.||+|||++||+||||||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-- 173 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-- 173 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE--
Confidence 999999999999999999997542 37788899999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccC
Q 040003 265 QQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~ 283 (489)
+.++.+||+|||+++.+.
T Consensus 174 -~~~~~~kL~dfg~a~~~~ 191 (307)
T cd05098 174 -TEDNVMKIADFGLARDIH 191 (307)
T ss_pred -cCCCcEEECCCccccccc
Confidence 667889999999998664
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=223.04 Aligned_cols=237 Identities=18% Similarity=0.215 Sum_probs=163.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCc--EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQK--EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
|.+++.||+|+||.||+|.+..++. .+|+|.++... ......+.+.+|+++++.+ +|+||+++++++...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCC
Confidence 3467889999999999999887765 58999886542 3455677889999999999 899999999977432
Q ss_pred CeEEEEEeecCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 202 VAVHVVMELCAGGELFDRIIQR------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
...++||||+.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence 3578999999999998887432 347889999999999999999999999999999999999 6678899999
Q ss_pred eccccccCCCCceee--e--eeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhh
Q 040003 276 FGLSMFFRPGLTFRV--W--LRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVI 336 (489)
Q Consensus 276 FGla~~~~~~~~~~~--~--~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 336 (489)
||+++.+..+..... . ....| ..+-++.+.++.+++. |..+|+...-.... .+..-.....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ 235 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 999988754332111 0 00011 1112344777777776 66666532110000 0000000000
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
...+...-.+.+ -+++..|++.|++++|+...|..
T Consensus 236 ~~~~~~~~~~li---~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 236 PPDCLDGLYSLM---SSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCCCHHHHHHH---HHHcCCCcccCcCHHHHHHHHHh
Confidence 111222222222 25677888889999998877755
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=221.91 Aligned_cols=235 Identities=20% Similarity=0.215 Sum_probs=167.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.+ +|+||+++++++.+....|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEE
Confidence 45999999999999999999865 55679999876432 2356788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++... ..++......++.+++.||.|||+++++||||||+||++ +.++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCCC
Confidence 9999999999988653 457888889999999999999999999999999999999 66788999999999876543
Q ss_pred Cceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... .....| .-+-.+.+.++.+++. |..+|+...-.... .+...........++.+-.+.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDI 236 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 22110 000111 0122344777888886 77766542110000 000000000001122222222
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+-+++..+++.|.+++++..+|..
T Consensus 237 ---i~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 237 ---MKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---HHHHccCCcccCcCHHHHHHHHhc
Confidence 235677788888888888887754
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=231.14 Aligned_cols=188 Identities=20% Similarity=0.320 Sum_probs=148.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.+ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHh-CCCchhceeeeeecccccc
Confidence 4467999999999999999999999999999999986532 2344556788999999999 899999999988643
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|+|||||.+ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~~ 166 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 166 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCccc
Confidence 357999999965 67666643 58888999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceee-eeeccC---------C----CCcchhHHHHHHHhcccccCCCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+.......... +.+..| . -+-++.+.++.+++.|...|....
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 222 (355)
T cd07874 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222 (355)
T ss_pred ccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 87644322111 122222 1 122345788888888888876543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-27 Score=235.32 Aligned_cols=151 Identities=25% Similarity=0.408 Sum_probs=128.2
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.++++||+|+||.||+|++. .+++.||+|++.... .....+.+.+|+.+|.++..|||||++++++....
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 35888999999999999999864 345689999996532 23344678899999999944999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------------------------------------------------
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---------------------------------------------------------- 224 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 224 (489)
..|+|||||.+|+|.+++...+
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 9999999999999999986432
Q ss_pred ----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 225 ----------------------------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 225 ----------------------------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.++...+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl-- 272 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI-- 272 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE--
Confidence 24556677889999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccC
Q 040003 265 QQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~ 283 (489)
+..+.+||+|||+++.+.
T Consensus 273 -~~~~~~kL~DfGla~~~~ 290 (401)
T cd05107 273 -CEGKLVKICDFGLARDIM 290 (401)
T ss_pred -eCCCEEEEEecCcceecc
Confidence 557789999999998654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=221.07 Aligned_cols=151 Identities=27% Similarity=0.394 Sum_probs=132.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
++|++.+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++++ +||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcc
Confidence 358999999999999999998865543 69999886432 344567889999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+++++|.+++... +.++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCcccccc
Confidence 9999999999999998764 468999999999999999999999999999999999999 667889999999998765
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 158 ~ 158 (267)
T cd05066 158 D 158 (267)
T ss_pred c
Confidence 4
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=221.16 Aligned_cols=233 Identities=23% Similarity=0.262 Sum_probs=167.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|... ++.||+|.+.... ...+++.+|+.+++.+ +|+||+++++++.+....|+|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDS----TAAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccch----hHHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEE
Confidence 35889999999999999999864 7899999986432 1457889999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEcccccccccccc
Confidence 99999999999987665 68999999999999999999999999999999999999 66788999999999876433
Q ss_pred CceeeeeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHH
Q 040003 286 LTFRVWLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 286 ~~~~~~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
.... .....| .+ +-++.+.++.+++. |..+|....+.... .+.+..........+.+-.+.+.
T Consensus 156 ~~~~-~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~- 233 (256)
T cd05039 156 QDSG-KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMK- 233 (256)
T ss_pred cccC-CCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHH-
Confidence 2211 001111 11 11233556666664 66665443221100 00000000011122222222222
Q ss_pred HHhhhcCCCCCCccHHHHHHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+++..+++.|++.+|+...|+.
T Consensus 234 --~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 234 --DCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --HHhccChhhCcCHHHHHHHHhc
Confidence 4677788888888888877754
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=223.43 Aligned_cols=184 Identities=22% Similarity=0.278 Sum_probs=146.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|++..++..||+|.+..... .......+.+|+.+++.+ +||||+++++++.+...+|+|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEEe
Confidence 8889999999999999999999999999999865322 222345678899999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 210 LCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 210 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|+. ++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCCc
Confidence 997 5888877542 468999999999999999999999999999999999999 677889999999997654321
Q ss_pred ceee------------eeeccCCC----CcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV------------WLRLHFLF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~------------~~~~~ypf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ++.+.-++ +-++.+.++.+++.|...|..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~ 204 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHG 204 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1100 11111011 123447788888888777653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=224.70 Aligned_cols=237 Identities=19% Similarity=0.234 Sum_probs=166.9
Q ss_pred eeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
|++.+.||+|+||.||+|+... ....+|+|.+... ........+.+|+.+++.+ +||||+++++.+...+..
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN--ASSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGPL 78 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC--CCHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCCc
Confidence 7788999999999999998753 2356888887643 2344567889999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 205 HVVMELCAGGELFDRIIQR------------------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~------------------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
|+||||+.+++|.+++... ..++...+..++.|++.||+|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999988642 2367788899999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLW 322 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~ 322 (489)
|+ +.++.+||+|||+++.+........ .....| . -+-++.+.++.+++. |..+|+....
T Consensus 159 ll---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 159 LV---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred EE---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99 5677899999999986543322110 000111 0 011234667777776 7766653221
Q ss_pred CCCC-CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 323 PDKV-AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 323 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.... .+.+..........+.+-.. -+..++..+++.|++..|+...|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 236 ERLFNLLKTGYRMERPENCSEEMYN---LMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHH---HHHHHccCCcccCCCHHHHHHHHHHH
Confidence 1000 00000000111122222222 23467788888999999998888765
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=226.64 Aligned_cols=240 Identities=20% Similarity=0.242 Sum_probs=166.5
Q ss_pred cceeecceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
++|.++++||+|+||.||+|.+.. ....+|+|.+... ........+.+|+++++.+.+||||+++++++.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN--ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC--CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 569999999999999999998642 3457999988643 2344567788999999999669999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+.+|+||||+.+|+|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-- 167 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV-- 167 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE--
Confidence 99999999999999999998653 247788889999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceee--eeec--cC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRV--WLRL--HF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~--~~~~--~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+++.......... .... .| ++ +-++.+.++.+++. |..+|.........
T Consensus 168 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 168 -TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred -cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 6677899999999986643221111 0000 11 01 11233666667665 55544332110000
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-.+ -+.+++..|++.|++..|+...|.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~---li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 247 KLLREGHRMDKPSNCTHELYM---LMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HHHHcCCCCCCCCCCCHHHHH---HHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 00000000001112222222 23367788888899998888877654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=226.46 Aligned_cols=151 Identities=31% Similarity=0.477 Sum_probs=137.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+++++.+ +||||+++++.+.+....|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEEE
Confidence 589999999999999999999999999999999876554445667889999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||+.+++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhccc
Confidence 999999999988654 468999999999999999999999999999999999999 667889999999987654
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=222.59 Aligned_cols=182 Identities=21% Similarity=0.276 Sum_probs=141.7
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHH---HHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR---IMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~---~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
.||+|+||.||+|.+..+++.||+|.+.+..............|.. +++.. +||||+.+++++.+....|+||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEEEEecC
Confidence 4899999999999999999999999997654432222223334443 34444 7999999999999999999999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceeee
Q 040003 212 AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291 (489)
Q Consensus 212 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~ 291 (489)
.|++|.+++...+.+++..+..++.|++.||.|||+.+|+||||||+|||+ +.++.+||+|||++..+.........
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV 156 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccCCcCcC
Confidence 999999999887889999999999999999999999999999999999999 66788999999999765432221111
Q ss_pred eeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 292 LRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 292 ~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.+..| .+ +-++.+.++.+++.|..+|...
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 11111 11 2234477888899888877643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=224.81 Aligned_cols=239 Identities=21% Similarity=0.259 Sum_probs=169.0
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.+.||+|+||.||+|.+. .++..||+|.++... .....+.+.+|+.+++++.+||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 45999999999999999999752 345689999886432 23455778999999999967999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..|+||||+.+|+|.+++.... .+++..+..++.+++.||.|||+++|+||||||+|||+ +.++.+||+|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCcccc
Confidence 9999999999999999986543 38999999999999999999999999999999999999 567789999999998
Q ss_pred ccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhc
Q 040003 281 FFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESL 340 (489)
Q Consensus 281 ~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 340 (489)
.+........ .....| .+ +-++.+.++.+++. |..+|....-.... .+............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHA 269 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCC
Confidence 7654332111 000111 01 12344677778775 77666432110000 00000000001112
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+.+-.+. +-++++.+++.|+++.|+...|.+
T Consensus 270 ~~~~~~l---i~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 270 PAEIYDI---MKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CHHHHHH---HHHHcCCCchhCcCHHHHHHHHHh
Confidence 2221121 225677888889999998877765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=217.95 Aligned_cols=186 Identities=21% Similarity=0.288 Sum_probs=152.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|.+..+++.|++|.+..... .......+.+|+++++.+ +||||+++++++.+....|+|||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEEE
Confidence 7888999999999999999999999999999875443 345567889999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+++++|.+++... ..+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili---~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---eCCCCEEEcccccceeccCccc
Confidence 99999999998764 568899999999999999999999999999999999999 6678899999999987755433
Q ss_pred eeeeeecc--C---------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 288 FRVWLRLH--F---------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~~~~~~~--y---------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
......+. | + -+-.+.+.++.+++.|..+|...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 204 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN 204 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 22111111 1 1 11123467778888887776543
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=220.56 Aligned_cols=183 Identities=26% Similarity=0.298 Sum_probs=142.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.||+|+||.||+|.+..+++.||+|.+.+...........+..|..++....+|+||+++++++...+..|+||||+.+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999999999999999987544333333445566666665554899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--- 290 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--- 290 (489)
++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++...........
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccccccCCCCcC
Confidence 9999999887889999999999999999999999999999999999999 6678899999999876532211100
Q ss_pred -----eeecc-C--CCCcchhHHHHHHHhcccccCCC
Q 040003 291 -----WLRLH-F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 -----~~~~~-y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
++.+. | .-+-.+.+.++.+++.|..+|..
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC
Confidence 11111 1 11112346777788888777753
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=222.66 Aligned_cols=151 Identities=25% Similarity=0.347 Sum_probs=130.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+|+.+ +||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCC
Confidence 46999999999999999999886543 789999985432 334456788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
..|+||||+.+|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCCEE
Confidence 9999999999999999986532 35677889999999999999999999999999999999 6778899
Q ss_pred EEeeccccccCC
Q 040003 273 TIDFGLSMFFRP 284 (489)
Q Consensus 273 l~DFGla~~~~~ 284 (489)
|+|||+++.+..
T Consensus 160 l~dfg~~~~~~~ 171 (277)
T cd05032 160 IGDFGMTRDIYE 171 (277)
T ss_pred ECCcccchhhcc
Confidence 999999986543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=219.68 Aligned_cols=149 Identities=30% Similarity=0.458 Sum_probs=136.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEE
Confidence 46999999999999999999999999999999986532 33445678999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQIT 157 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEcc
Confidence 9999999999999888899999999999999999999999999999999999999 667889999999987654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=221.19 Aligned_cols=235 Identities=24% Similarity=0.283 Sum_probs=167.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~ 204 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+.+|+.+++.+ +||||+++++++.+ ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence 388899999999999999999999999999998654322 234456788999999999 79999999999875 3678
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+++|||+.+++|.+++...+.+++.....++.|++.||.|||+++|+||||||+||++ +.++.+||+|||+++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccccc
Confidence 9999999999999999887789999999999999999999999999999999999999 6677899999999986542
Q ss_pred CCce----e-eeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHH
Q 040003 285 GLTF----R-VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~----~-~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (489)
.... . ...+..| .+ +-++.+.++.+++.|..+|....... .+...........+......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--AIFKIATQPTNPQLPSHISE 236 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH--HHHHHhcCCCCCCCchhcCH
Confidence 1110 0 0001111 01 11234778888888887765321100 00000000000111111122
Q ss_pred HHHHHHhhhcCCCCCCccHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.++.+..++..++++|++.+|+.
T Consensus 237 ~~~~li~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 237 HARDFLGCIFVEARHRPSAEELL 259 (266)
T ss_pred HHHHHHHHhcCChhhCcCHHHHh
Confidence 34444566677888888877764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=221.97 Aligned_cols=236 Identities=24% Similarity=0.259 Sum_probs=170.7
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
++....|++.+.||+|+||.||+|++..+++.||+|.+..... ...+.+.+|+.+++.+ +|+||+++++++.....
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~ 91 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDE 91 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCE
Confidence 3445679999999999999999999999999999999875432 2346788999999998 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+||||+.+++|.+++.. +.+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++....
T Consensus 92 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred EEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhcc
Confidence 9999999999999998754 468899999999999999999999999999999999999 667889999999988654
Q ss_pred CCCceee--eeeccC---------C----CCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchh--hhhhccHHHH
Q 040003 284 PGLTFRV--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRV--IAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 345 (489)
....... ..+..| . -+-++.+.++.+++.|..+|......... ......... ....+...-.
T Consensus 168 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (296)
T cd06654 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247 (296)
T ss_pred ccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHH
Confidence 3321111 011111 1 11234477888899998887543211100 000000000 0111222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+. ++++.++..|.+..|+..
T Consensus 248 ~li~---~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 248 DFLN---RCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHH---HHCcCCcccCcCHHHHhh
Confidence 2222 467778888888888754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=228.32 Aligned_cols=182 Identities=23% Similarity=0.316 Sum_probs=147.2
Q ss_pred ccceeecceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...|++++.||+|+||.||+|... .+++.||+|.+... ....+|+++|+.| +|||||+++++|......
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTI-SHRAIINLIHAYRWKSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhc-CCCCccceeeeEeeCCEE
Confidence 346999999999999999999764 35678999987542 2345799999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||++. ++|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++.+..
T Consensus 162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKLDA 237 (392)
T ss_pred EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccccccCc
Confidence 99999995 6898988777789999999999999999999999999999999999999 6778899999999987654
Q ss_pred CCce----eeeeeccC---------CC----CcchhHHHHHHHhcccccCCCCC
Q 040003 285 GLTF----RVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 285 ~~~~----~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
.... ..+.+..| +| +.++.++++.+++.|..+|....
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 3221 11122222 11 22345788889998888876543
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=221.18 Aligned_cols=151 Identities=32% Similarity=0.495 Sum_probs=134.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC--CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.|++++.||+|+||.||+|.+..+++.||+|.+..... ......+.+.+|+.+++++ +||||+++++++.+. ..+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCceE
Confidence 48999999999999999999999999999998864321 2234567889999999999 899999999998763 568
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+++++|.+++...+.+++..+..++.|++.+|.|||+.||+|+||||+|||+ +.++.+||+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCccccccc
Confidence 8999999999999999887788999999999999999999999999999999999999 667889999999998654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-26 Score=219.49 Aligned_cols=187 Identities=24% Similarity=0.355 Sum_probs=150.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.+ +||||+++++++......++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEEE
Confidence 58999999999999999999999999999999865432 222335678999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||++++.|..++.....+++..+..++.|++.+|.|||++||+||||||+||++ +.++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCccc
Confidence 999998887776666679999999999999999999999999999999999999 66788999999999877544311
Q ss_pred ee------------eee--ccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 289 RV------------WLR--LHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 289 ~~------------~~~--~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. .+. ..| .-+.++.+.++.+++.|..+|+..
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~ 204 (286)
T cd07847 157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGK 204 (286)
T ss_pred ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 10 010 111 112234477788888888777643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=221.94 Aligned_cols=239 Identities=18% Similarity=0.173 Sum_probs=167.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++.++||+|+||+||+|.+..+++ .||+|++... ........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN--TSPKANKEILDEAYVMAGV-GSPYVCRLLGICLT-ST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC--CCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcC-CC
Confidence 458999999999999999999877776 4799988643 2344556788999999999 79999999999875 45
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+++|||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~---~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCCCceeec
Confidence 78999999999999998764 568999999999999999999999999999999999999 55677999999999876
Q ss_pred CCCCceeee----eeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRVW----LRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~~----~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
......... ....| .+ +-++.++++.+++. |..++....-.... .+............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTI- 238 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCH-
Confidence 533221110 00111 11 12344677777665 66655432100000 0000000000111222
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
++.. -+.+++..|++.|.+..|+...|..+.
T Consensus 239 ~~~~--li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 239 DVYM--IMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred HHHH--HHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 2222 234678888899999999887776653
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=225.46 Aligned_cols=152 Identities=27% Similarity=0.416 Sum_probs=130.5
Q ss_pred cceeecceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.|.+.+.||+|+||.||+|++.. .+..||+|.+... ........+.+|+.+++.+.+||||+++++++..
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc--cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 569999999999999999997532 3457999988643 2344567889999999999779999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
....|+||||+.+|+|.+++.... .++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili-- 170 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV-- 170 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE--
Confidence 999999999999999999987642 35677888999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~ 284 (489)
+.++.+||+|||+++.+..
T Consensus 171 -~~~~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 171 -TENNVMKIADFGLARDVNN 189 (304)
T ss_pred -cCCCcEEECCCccceeccc
Confidence 6678899999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=222.51 Aligned_cols=239 Identities=17% Similarity=0.217 Sum_probs=166.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcE----EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKE----FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++.+.||+|+||+||+|.+..+++. +++|.+... ........+..|+.+++++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-Cc
Confidence 3588999999999999999998877764 666666422 2233456788899999999 89999999998754 56
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+++|||+.+|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 78999999999999999764 568999999999999999999999999999999999999 66788999999999876
Q ss_pred CCCCceee---------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCCCCCCCcchhhhhhccHHH
Q 040003 283 RPGLTFRV---------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKVAVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~---------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (489)
........ ...+.| .-+-++.+.++.+++. |..++.+..+.....+................
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTID 239 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHH
Confidence 43321100 001111 0122344777888876 77666543221100000000000000111111
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. ..-+-.+++.|++.|.+..|+...|..+
T Consensus 240 ~--~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 240 V--YMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred H--HHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1 2223478889999999999998877664
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=230.51 Aligned_cols=186 Identities=20% Similarity=0.336 Sum_probs=146.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.++|++.+.||+|+||.||+|.+..+++.||||++.+.. ........+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhc-CCCCccccceeeccccccc
Confidence 4467999999999999999999999999999999986533 2334456788999999999 899999999987543
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|+||||+.+ +|...+.. .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCCc
Confidence 457999999965 67776643 57888999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.......... +.+..| .+ +-++.++++.+++.|...|+.
T Consensus 174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred cccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 87644322111 122222 11 123457788888888877764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=228.22 Aligned_cols=240 Identities=21% Similarity=0.257 Sum_probs=166.7
Q ss_pred cceeecceeccCCceEEEEEEEcCC-------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT-------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
..|++++.||+|+||.||+|++... ...||+|.+... ......+.+.+|+++++++.+||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 3599999999999999999986542 236899987643 2344567889999999999679999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+..|+||||+.+|+|.+++.... .++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill-- 167 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV-- 167 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE--
Confidence 999999999999999999987532 35667788899999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceeee----eeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRVW----LRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~~----~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+++.+......... ....| .+ +.++.+.++.+++. |..+|....+....
T Consensus 168 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 168 -TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred -cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 66788999999999866432211110 00011 01 11234667777765 55555433221100
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-.. -+.+++..+++.|+++.|+...|..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~---li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 247 KLLKEGHRMDKPANCTHELYM---IMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred HHHHcCCCCCCCCCCCHHHHH---HHHHHcccChhhCcCHHHHHHHHHHH
Confidence 00000000011112222111 23356778888899999888877665
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=222.06 Aligned_cols=143 Identities=20% Similarity=0.337 Sum_probs=120.7
Q ss_pred ceeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 134 RKLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
+.||+|+||+||+|.... ....+|+|.+... ........+.+|+++++.+ +||||+++++++.+...+|+||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS--ATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc--CChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeC
Confidence 369999999999996533 3456888876532 2344456788999999999 8999999999999999999999999
Q ss_pred CCCchHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 212 AGGELFDRIIQRG-----HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 212 ~~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|+|.+++.... ..++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQ 150 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEecccccccc
Confidence 9999999986642 24567788999999999999999999999999999999 66788999999998754
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=220.41 Aligned_cols=150 Identities=30% Similarity=0.471 Sum_probs=136.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||.||+|.+..++..+|+|.+... .....+.+.+|+++++++ +||||+++++++......|+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEE
Confidence 45699999999999999999999889999999998643 445567888999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||+.+++|.+++... ..+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.+||+|||++....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNK 154 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhc
Confidence 99999999999988764 468999999999999999999999999999999999999 667889999999987654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-26 Score=217.93 Aligned_cols=238 Identities=16% Similarity=0.172 Sum_probs=168.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
..|++.+.||+|+||.||+|.++.+++ .+|+|.+.... .......+.+|+.+++++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-Cc
Confidence 358999999999999999999877665 58999876442 244567788999999999 89999999999887 78
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++||||+.+|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcccccc
Confidence 99999999999999998764 468999999999999999999999999999999999999 66778999999999876
Q ss_pred CCCCceeeeee----ccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRVWLR----LHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~~~~----~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........... ..| ++ +-++.+.++.+++. |..++......+.. .+.+..........+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTID 239 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHH
Confidence 54332111000 011 11 11233667777775 76665432211000 00000000001111111
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. ..-+.+++..|++.+.+..++...|..+
T Consensus 240 -~--~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 240 -V--YMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred -H--HHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1 1223466777888888888888877765
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=221.95 Aligned_cols=152 Identities=22% Similarity=0.354 Sum_probs=129.6
Q ss_pred ccceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~--~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 3569999999999999999998653 4567999988543 2233456788999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
...++||||+.+++|.+++.... .++...+..++.|++.||.|||+.|++||||||+|||+ +.++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~---~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE---cCCCCE
Confidence 99999999999999999986532 24567788899999999999999999999999999999 667889
Q ss_pred EEEeeccccccCC
Q 040003 272 KTIDFGLSMFFRP 284 (489)
Q Consensus 272 kl~DFGla~~~~~ 284 (489)
||+|||+++.+..
T Consensus 159 ~l~dfg~~~~~~~ 171 (277)
T cd05062 159 KIGDFGMTRDIYE 171 (277)
T ss_pred EECCCCCccccCC
Confidence 9999999986543
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-26 Score=222.13 Aligned_cols=236 Identities=24% Similarity=0.259 Sum_probs=171.9
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
++....|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+ +|+||+++++++.....
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~ 90 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDE 90 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCE
Confidence 4455679999999999999999999999999999999865332 2346688999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+||||+++++|.+++.. ..+++..+..++.|++.+|.|||+.||+||||||+|||+ +.++.+||+|||++....
T Consensus 91 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEcc
Confidence 9999999999999998754 468899999999999999999999999999999999999 677889999999998765
Q ss_pred CCCceee--eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchh--hhhhccHHHH
Q 040003 284 PGLTFRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRV--IAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 345 (489)
....... ..+..| .+ +-++.+.++.+++.|..+|......... ......... ....++....
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFR 246 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHH
Confidence 4332111 011111 11 1123477888899998877543211100 000000000 0112222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+ -+++..|++.|.+..|+..
T Consensus 247 ~li---~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 247 DFL---NRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHH---HHHccCChhhCcCHHHHhc
Confidence 222 2567778888999888764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=221.41 Aligned_cols=153 Identities=23% Similarity=0.355 Sum_probs=132.8
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.+ +|+||+++++++.+..
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERL 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence 458999999999999999999987 7788999987543 2334446788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 203 AVHVVMELCAGGELFDRIIQRG-------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..|+||||+.|++|.+++...+ .+++..+..++.||+.||+|||+++|+||||||+|||+...+....+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999999987643 478889999999999999999999999999999999996544445799999
Q ss_pred eccccccC
Q 040003 276 FGLSMFFR 283 (489)
Q Consensus 276 FGla~~~~ 283 (489)
||+++.+.
T Consensus 163 fg~~~~~~ 170 (277)
T cd05036 163 FGMARDIY 170 (277)
T ss_pred CccccccC
Confidence 99998763
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-26 Score=219.73 Aligned_cols=150 Identities=23% Similarity=0.319 Sum_probs=127.8
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
++|++.++||+|+||.||+|..+. .+..||+|.+.... .......+.+|+.+++.+ +||||+++++++.+..
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKGQ 82 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCC
Confidence 569999999999999999997652 35579999876432 233445678999999999 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
..|+||||+.+|+|.+++...+ ......+..++.|++.||.|||++||+||||||+|||+ +.++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili---~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---AHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE---cCCCcEE
Confidence 9999999999999999996532 23556788899999999999999999999999999999 6678899
Q ss_pred EEeeccccccC
Q 040003 273 TIDFGLSMFFR 283 (489)
Q Consensus 273 l~DFGla~~~~ 283 (489)
|+|||+++.+.
T Consensus 160 L~Dfg~~~~~~ 170 (288)
T cd05061 160 IGDFGMTRDIY 170 (288)
T ss_pred ECcCCcccccc
Confidence 99999998654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=221.04 Aligned_cols=233 Identities=18% Similarity=0.179 Sum_probs=161.6
Q ss_pred eeccCCceEEEEEEEcCCCcE--EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEKATQKE--FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||+|.+..++.. +|+|.+... ......+.+.+|++++.++.+||||+++++++...+..|+||||+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 589999999999999887764 577777532 2344557888999999999779999999999999999999999999
Q ss_pred CCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 213 GGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 213 ~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
+|+|.+++.... .++...+..++.|++.||+|||++||+||||||+|||+ +.++.+||+||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECCC
Confidence 999999987542 36788899999999999999999999999999999999 67788999999
Q ss_pred ccccccCCCCcee-------e-----eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhc
Q 040003 277 GLSMFFRPGLTFR-------V-----WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESL 340 (489)
Q Consensus 277 Gla~~~~~~~~~~-------~-----~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (489)
|++.......... . +....|. -+-++.+.++.+++. |..+|....+.... .+............
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 236 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcC
Confidence 9986322110000 0 0011110 112344777778875 77666443221100 00000000001112
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+.+-. .-+.+++..|+..|++..|+...|..+
T Consensus 237 ~~~~~---~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 237 DDEVY---DLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CHHHH---HHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 22211 223466778888889888887777553
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=220.15 Aligned_cols=181 Identities=25% Similarity=0.362 Sum_probs=147.1
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||+||+|.+..+++.||+|.+.+...........+.+|+++|+.+ +||||+++++++...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 69999999999999999999999999765444444456677899999999 79999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---
Q 040003 216 LFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV--- 290 (489)
Q Consensus 216 L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~--- 290 (489)
|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...........
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccC
Confidence 999987765 68999999999999999999999999999999999999 6678899999999987643221111
Q ss_pred ---------eeeccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 291 ---------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 291 ---------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+....+ .-+-++.+.++.+++.|..+|...
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 111111 112234477888888888877543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=219.13 Aligned_cols=235 Identities=21% Similarity=0.233 Sum_probs=167.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+. +++.||+|.+..... ..+.+.+|+.+++++ +||||+++++++......|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeeee
Confidence 45999999999999999999875 457899999865432 245688999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++.... .++...+..++.+++.||.+||++||+||||||+||++ +.++.+||+|||+++.+...
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEEEccCC
Confidence 99999999999987653 68999999999999999999999999999999999999 66788999999999876532
Q ss_pred Cceeee---eeccC--C-----------CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRVW---LRLHF--L-----------FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~~---~~~~y--p-----------f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
...... ....| | -+-.+.+.++.+++. |..+|......... .+............+..-.+
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 235 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYD- 235 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH-
Confidence 211100 00111 1 111234667777776 77766543211000 00000000001112222111
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+-+++..+++.|.+++++...|..
T Consensus 236 --li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 236 --IMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --HHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1235677788888988888877653
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=219.23 Aligned_cols=150 Identities=25% Similarity=0.488 Sum_probs=135.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH------HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE------EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~------~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
|.++..||+|+||.||+|.+..+++.||+|.+........ ...+.+.+|+.+++++ +||||+++++++.+...
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDADH 80 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCc
Confidence 7788899999999999999998999999998865433221 2345788999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.++||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+++.+.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCcccc
Confidence 99999999999999999888889999999999999999999999999999999999999 677889999999998775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=229.90 Aligned_cols=188 Identities=23% Similarity=0.356 Sum_probs=148.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.+.|++++.||+|+||+||+|.+..+++.||+|++.+.. ........+.+|+.+|+++ +||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhccccccc
Confidence 3467999999999999999999999999999999986532 2223445677999999999 799999999987543
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|++||++ +++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCccc
Confidence 4579999998 778877664 4579999999999999999999999999999999999999 67788999999999
Q ss_pred cccCCCCceee---------eeec--cC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFRV---------WLRL--HF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~~---------~~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.......... ++.+ .| .-+-++.+.++.+++.|...|+..
T Consensus 166 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 166 RQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred eecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 87654321110 1111 11 122345588888999988877654
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=222.19 Aligned_cols=152 Identities=25% Similarity=0.397 Sum_probs=133.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCC----------------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ----------------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~----------------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 191 (489)
+.|++++.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+++++.+ +||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRL-SDPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhc-CCCCE
Confidence 45999999999999999999876544 568999886542 235567889999999999 79999
Q ss_pred eEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 192 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
+++++++......++||||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999987655 688999999999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccCCC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
++ +.++.+||+|||+++.....
T Consensus 162 li---~~~~~~~l~dfg~~~~~~~~ 183 (296)
T cd05051 162 LV---GKNYTIKIADFGMSRNLYSS 183 (296)
T ss_pred ee---cCCCceEEccccceeecccC
Confidence 99 66688999999999876443
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=219.31 Aligned_cols=147 Identities=29% Similarity=0.455 Sum_probs=129.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+. ++..+|+|.+.+... ....+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEE
Confidence 3888999999999999999876 466899999864332 124577899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+++....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~ 152 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLD 152 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceeccc
Confidence 999999999998754 468899999999999999999999999999999999999 6678899999999986643
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-26 Score=219.86 Aligned_cols=151 Identities=28% Similarity=0.489 Sum_probs=135.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|+++++||+|+||.||+|.+..+++.||+|.+... .....+.+.+|+.+++.+ +||||+++++++.....+|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEE
Confidence 346699999999999999999999999999999998643 455677889999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+||||+.+++|..++.. ...+++..+..++.|++.+|.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNV 161 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceecc
Confidence 99999999999887754 4568999999999999999999999999999999999999 667889999999987643
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=223.16 Aligned_cols=152 Identities=28% Similarity=0.423 Sum_probs=130.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCC--------------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ--------------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~--------------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 193 (489)
.+|++.++||+|+||.||+|++..++ ..||+|.+... ......+.+.+|+++|+++ +|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~ei~~l~~l-~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD--VTKTARNDFLKEIKIMSRL-KNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC--CCHHHHHHHHHHHHHHHhC-CCCCcCe
Confidence 46999999999999999999875432 35899998653 2344566789999999999 8999999
Q ss_pred EEEEEEeCCeEEEEEeecCCCchHHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEe
Q 040003 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRG------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFL 261 (489)
Q Consensus 194 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nil 261 (489)
+++++......|+|||||.+++|.+++.... .++...+..++.+++.||.|||++||+||||||+|||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999886532 3577788899999999999999999999999999999
Q ss_pred eeeCCCCCCeEEEeeccccccCCC
Q 040003 262 FINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 262 l~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+ +.++.+||+|||++..+...
T Consensus 162 l---~~~~~~kl~dfg~~~~~~~~ 182 (295)
T cd05097 162 V---GNHYTIKIADFGMSRNLYSG 182 (295)
T ss_pred E---cCCCcEEecccccccccccC
Confidence 9 56778999999999876443
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-28 Score=218.37 Aligned_cols=184 Identities=23% Similarity=0.322 Sum_probs=144.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE--------e
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE--------D 200 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--------~ 200 (489)
.|+-..+||+|.||.||+|+.+.+|+.||+|++--... ....-....+|+.+|..| .|+|++.+++.|. +
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~l-kHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLL-KHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccCCcccc
Confidence 37778899999999999999999999999987643111 111224567899999999 7999999988763 3
Q ss_pred CCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...+|+||.+|+. +|.-+|... .+++..++..++++++.||.|+|...|+|||+|++|+|| +.++.+||+|||+|
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccccc
Confidence 4569999999976 888888765 579999999999999999999999999999999999999 78899999999999
Q ss_pred cccCCCC------ceeeeeeccC--------------CCCcchhHHHHHHHhcccccCC
Q 040003 280 MFFRPGL------TFRVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 280 ~~~~~~~------~~~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
+.+.... ....+.+..| |.+.+..+|++.++..+..-+.
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq 230 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ 230 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence 8775322 1222444444 4444555788887776654443
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=221.59 Aligned_cols=236 Identities=18% Similarity=0.215 Sum_probs=169.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|+++++||.|+||.||+|.+.. ++.+|+|++.... ......+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEE
Confidence 459999999999999999999987 8899999986532 23456788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+++++|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchhhcCCc
Confidence 9999999999998753 458889999999999999999999999999999999999 66788999999999876432
Q ss_pred Cceee------------e-eeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 286 LTFRV------------W-LRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 286 ~~~~~------------~-~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
..... . ....+ .-+-++.+.++.+++. |..+|....-.... .+............+.+..+
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYK-- 235 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHH--
Confidence 21111 0 00111 0111234667777776 66666533210000 00000000011112222221
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+.+++..|++.|++..++.+.|..
T Consensus 236 -~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 236 -IMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred -HHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2236677888889999998887754
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-26 Score=220.36 Aligned_cols=149 Identities=29% Similarity=0.491 Sum_probs=134.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..++..+|+|.+... .....+.+.+|+++++.+ +||||+++++++......|+|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEE
Confidence 4588999999999999999999999999999998543 345567888999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.+++|..++.. .+.+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNT 154 (282)
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEcccccccccc
Confidence 999999999887754 4568999999999999999999999999999999999999 667889999999997653
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=236.66 Aligned_cols=187 Identities=19% Similarity=0.247 Sum_probs=136.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCC-cEEEEE--------------EeecccCCCHHHHHHHHHHHHHHHHhcCCC
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQ-KEFACK--------------SIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~-~~~avK--------------~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp 189 (489)
.+.+.|+++++||+|+||+||+|..+... ..+++| .+.+...........+.+|+.+|+++ +||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CCC
Confidence 34567999999999999999998765432 222222 11111112233456788999999999 899
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
|||++++++.+.+..|+|||++. ++|..++... .......++.++.||+.||.|||++|||||||||+|||+
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl-- 300 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL-- 300 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE--
Confidence 99999999999999999999985 5777776532 223456778899999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCcee---eeeeccC---------CC----CcchhHHHHHHHhccccc
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFR---VWLRLHF---------LF----FQKQRQSVLQTRLVRNLN 316 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~---~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~ 316 (489)
+.++.+||+|||+++.+....... .+.+..| .| +-++.++++.+++.+.+.
T Consensus 301 -~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 301 -NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred -CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 667889999999998775432211 1122222 11 223457788888877653
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=215.36 Aligned_cols=186 Identities=25% Similarity=0.335 Sum_probs=150.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||.+++..+++.+++|.+...... ......+.+|+++++++ +|+||+++++++.+...+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEE
Confidence 388999999999999999999999999999998755433 34556788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||.+++|.+++... ..+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~---~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE---eCCCCEEECcCcceEEccccc
Confidence 999999999998764 468999999999999999999999999999999999999 667789999999998764433
Q ss_pred ceee--eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV--WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~--~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... +.+..| .-+-++.+.++.+++.|...|..
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA 203 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC
Confidence 1100 111111 11123447777788877666543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=217.63 Aligned_cols=230 Identities=25% Similarity=0.302 Sum_probs=166.7
Q ss_pred ceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
+.||+|+||.||+|.+... +..||+|.+..... ......+.+|+++++.+ +|+||+++++++.+....++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEe
Confidence 3699999999999999866 88999999875432 22467889999999999 699999999999999999999999
Q ss_pred cCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 211 CAGGELFDRIIQR---------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 211 ~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEcccccccc
Confidence 9999999999875 678999999999999999999999999999999999999 6678899999999988
Q ss_pred cCCCCceee----eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccH
Q 040003 282 FRPGLTFRV----WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSE 342 (489)
Q Consensus 282 ~~~~~~~~~----~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 342 (489)
......... ..+..| .-+-++.+.++.+++. |..+|....+.... .+............+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD 234 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCCh
Confidence 765431111 111111 1112344677777776 46666543221100 0000000011112222
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l 372 (489)
+-... +.+++..|++.|++..|+...|
T Consensus 235 ~~~~l---i~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 235 ELYEL---MLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHHHH---HHHHccCCcccCcCHHHHHHhh
Confidence 22222 3356778888889888887665
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=215.64 Aligned_cols=238 Identities=18% Similarity=0.184 Sum_probs=167.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
.|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+++++.+ +||||+++++++.+.+..|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCcE
Confidence 48888999999999999999876654 69999886432 344567789999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+++|.+++... +.+++..+..++.+++.|+.|||+.||+||||||+||++ +.++.+||+|||++.....
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceeccc
Confidence 999999999999988754 578999999999999999999999999999999999999 6678899999999986643
Q ss_pred CCceee----------------eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 285 GLTFRV----------------WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 285 ~~~~~~----------------~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
...... +....|. -+-++.+.++.+++. |..+|......... .+..............+-
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAV 239 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHH
Confidence 221111 0001110 011234667777665 66665432110000 000000000000111211
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..-+.+++..+++.|.+..++...|.++
T Consensus 240 ---~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 240 ---YQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1223356677888899999888877653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-26 Score=218.44 Aligned_cols=149 Identities=25% Similarity=0.374 Sum_probs=127.8
Q ss_pred eeecceeccCCceEEEEEE----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--Ce
Q 040003 130 YSLGRKLGQGQFGTTFLCV----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VA 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~ 203 (489)
|++.+.||+|+||+||++. ...+++.||+|.+.... .......+.+|+++|+++ +||||+++++++... ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCce
Confidence 3889999999999998865 33567899999986532 233456788999999999 899999999987653 46
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+||||+.+++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeecccccccC
Confidence 8999999999999998865 469999999999999999999999999999999999999 667889999999998765
Q ss_pred CC
Q 040003 284 PG 285 (489)
Q Consensus 284 ~~ 285 (489)
.+
T Consensus 159 ~~ 160 (283)
T cd05080 159 EG 160 (283)
T ss_pred Cc
Confidence 43
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=216.06 Aligned_cols=185 Identities=23% Similarity=0.364 Sum_probs=151.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+..+.||.|+||.||+|.+..++..||+|++.... .......+.+|+.+++++ +||||+++++++.+....|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEE
Confidence 45888999999999999999999999999999987542 234567889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.|++|.+++.. +.+++..+..++.|++.||.|||+.+++|+||+|+||++ +.++.++|+|||++..+.....
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCCcc
Confidence 999999999998754 578999999999999999999999999999999999999 6677899999999977654332
Q ss_pred eee--eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 FRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
... ..+..| ++. -.+.+.++.+++.|..++..
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCC
Confidence 111 001111 111 12347788888888877653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=218.27 Aligned_cols=150 Identities=27% Similarity=0.392 Sum_probs=133.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
.|++.+.||+|+||.||+|.+..+++ .||+|.+... ........+..|+.+++.+ +||||+++++++.+....+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceE
Confidence 48899999999999999999887665 5999998643 2455667899999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+++|.+++... +.++...+..++.|++.||.|||++|++||||||+|||+ +.++.+||+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCcccccccc
Confidence 999999999999988753 568999999999999999999999999999999999999 6678899999999986643
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=215.52 Aligned_cols=149 Identities=22% Similarity=0.373 Sum_probs=130.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||+|.+.. +..+|+|.+..... ....+.+|+.+++.+ +||||+++++++......|+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEE
Confidence 348999999999999999998754 45699998864332 235688999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+|+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCC
Confidence 9999999999998764 468999999999999999999999999999999999999 66778999999999866443
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=217.31 Aligned_cols=152 Identities=29% Similarity=0.397 Sum_probs=131.6
Q ss_pred cceeecceeccCCceEEEEEEE----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 201 (489)
+.|++.+.||+|+||.||+|.. ..+++.||+|.+... .....+.+.+|+++++.+ +||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCC
Confidence 3589999999999999999974 457889999998643 345567889999999999 89999999998643 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..+|+||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccc
Confidence 5689999999999999998654 468999999999999999999999999999999999999 667889999999999
Q ss_pred ccCCCC
Q 040003 281 FFRPGL 286 (489)
Q Consensus 281 ~~~~~~ 286 (489)
......
T Consensus 157 ~~~~~~ 162 (284)
T cd05081 157 VLPQDK 162 (284)
T ss_pred cccCCC
Confidence 775443
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-26 Score=217.89 Aligned_cols=234 Identities=21% Similarity=0.213 Sum_probs=161.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|.+..++ .||+|++..... ..+.+.+|+++++.+ +||||+++++++.. ...|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc----CHHHHHHHHHHHHhC-CCCCcceEEEEECC-CCcEEE
Confidence 45999999999999999999887654 699999875332 235688999999999 79999999998754 568999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+|+|.+++... ..+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||+++.+..+
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill---~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE---cCCCcEEeccCCceeecccc
Confidence 9999999999998753 357888999999999999999999999999999999999 66788999999999876433
Q ss_pred Cceee--------------eeeccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV--------------WLRLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~--------------~~~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... +....| .-+-++.+.++.+++. |..+|......... .+............+..-.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 233 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH-- 233 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHH--
Confidence 22110 001111 1111244677778876 66666533210000 0000000000011121111
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.-+-+++..|++.|++..++..+|..
T Consensus 234 -~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 234 -DLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred -HHHHHHccCCcccCCCHHHHHHHHHH
Confidence 11224556677788888887777654
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=237.15 Aligned_cols=157 Identities=24% Similarity=0.385 Sum_probs=137.6
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeeccc-CCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe--EEEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK-LTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA--VHVV 207 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~-~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~--~~lv 207 (489)
+...+||+|+|-+||+|.+..+|..||.-.++... ...+..+++|..|+.+|+.| +|||||++|++|.+... +.+|
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCCceeeee
Confidence 34568999999999999999999999976554332 34567789999999999999 89999999999987665 7889
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
.|++..|+|..|+++.+++....++.|++||+.||.|||++. |||||||.+||+|+ +..|.|||+|+|||...+..
T Consensus 122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhcc
Confidence 999999999999999999999999999999999999999986 99999999999996 45788999999999987655
Q ss_pred Cceee
Q 040003 286 LTFRV 290 (489)
Q Consensus 286 ~~~~~ 290 (489)
.....
T Consensus 200 ~aksv 204 (632)
T KOG0584|consen 200 HAKSV 204 (632)
T ss_pred cccee
Confidence 44443
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=226.78 Aligned_cols=159 Identities=28% Similarity=0.427 Sum_probs=140.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC----HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-e
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT----EEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-D 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~ 200 (489)
+.++|-++..||+|||+.||+|.+....+.||||+-...+... ....+...+|.+|.+.| +||.||++|+||. +
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFSLD 539 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeeeec
Confidence 4567999999999999999999999999999999865443322 22345678999999999 8999999999994 6
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
.+.+|-|+|||+|.+|.-+|+.+..+++.+++.|+.||+.||.||.+.. |||-||||.||||.+.+..|.+||+||||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 6788999999999999999999999999999999999999999998764 99999999999999988899999999999
Q ss_pred ccccCCC
Q 040003 279 SMFFRPG 285 (489)
Q Consensus 279 a~~~~~~ 285 (489)
++++...
T Consensus 620 SKIMddd 626 (775)
T KOG1151|consen 620 SKIMDDD 626 (775)
T ss_pred hhhccCC
Confidence 9988643
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-26 Score=215.94 Aligned_cols=231 Identities=19% Similarity=0.233 Sum_probs=162.4
Q ss_pred ceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
++||+|+||.||+|.+..++ ..+|+|.+...... ...+.+.+|+.+++.+ +|+||+++++++. ....++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876554 78999998755432 3456788999999999 8999999999876 4568999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee
Q 040003 211 CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290 (489)
Q Consensus 211 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~ 290 (489)
+.+++|.+++...+.+++..+..++.|++.+|.|||..||+||||||+|||+ +.++.+||+|||+++..........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcccc
Confidence 9999999999887789999999999999999999999999999999999999 6678899999999987754432211
Q ss_pred -eee----ccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHH
Q 040003 291 -WLR----LHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 291 -~~~----~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
... ..| .-+-++.+.++.+++. |..+|....-.... .+............+..-.+.+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~- 232 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIML- 232 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHH-
Confidence 000 011 0112244677777775 66666432110000 00000000011112222222222
Q ss_pred HHhhhcCCCCCCccHHHHHHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+++..+++.|++..++...|+.
T Consensus 233 --~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 233 --SCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred --HHhcCChhhCcCHHHHHHHHHh
Confidence 4566788888888888887765
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=222.58 Aligned_cols=180 Identities=23% Similarity=0.348 Sum_probs=138.2
Q ss_pred cceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEEEEE
Q 040003 133 GRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVHVVM 208 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~lv~ 208 (489)
+++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+++|+++ +||||++++++|.. ...+|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence 468999999999999976 4678999999865322 23567899999999 89999999999854 46789999
Q ss_pred eecCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEeecc
Q 040003 209 ELCAGGELFDRIIQR---------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDFGL 278 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DFGl 278 (489)
||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9985 5888776532 248889999999999999999999999999999999999543 3457899999999
Q ss_pred ccccCCCCce-----eeeeecc------------C--CCCcchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTF-----RVWLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~-----~~~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
|+.+...... ..+.+.. | .-+.++.++++.+++.|...|..
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9876533210 0111111 2 12234558888899988877753
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-26 Score=220.85 Aligned_cols=151 Identities=25% Similarity=0.391 Sum_probs=129.9
Q ss_pred cceeecceeccCCceEEEEEEEcC----------------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----------------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 191 (489)
++|++.++||+|+||.||+|.+.. ++..+|+|++... ........+.+|+.+|+.+ +|+||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~E~~~l~~l-~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED--ANKNARNDFLKEIKIMSRL-KDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhC-CCCCc
Confidence 459999999999999999986432 3457899988643 2344567889999999999 89999
Q ss_pred eEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-----------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 192 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
+++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999999987542 356678999999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccCC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+ +.++.+||+|||+++.+..
T Consensus 162 li---~~~~~~~l~dfg~~~~~~~ 182 (296)
T cd05095 162 LV---GKNYTIKIADFGMSRNLYS 182 (296)
T ss_pred EE---cCCCCEEeccCcccccccC
Confidence 99 5678899999999987644
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=214.03 Aligned_cols=231 Identities=19% Similarity=0.197 Sum_probs=163.5
Q ss_pred eeccCCceEEEEEEE--cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVE--KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
+||+|+||.||+|.+ ..++..+|+|++.... ......+.+.+|+.+++.+ +||||+++++++.. ...++||||+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQL-DNPYIVRMIGICEA-ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCcEEEEecCC
Confidence 589999999999965 4567899999986432 3344567889999999999 89999999998754 56799999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
+|+|.+++...+.+++..+..++.|++.||+|||++||+||||||.|||+ +.++.+||+|||+++.+........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCeeeec
Confidence 99999999887889999999999999999999999999999999999999 6678899999999987654432211
Q ss_pred -e--eeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 291 -W--LRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 291 -~--~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
. ....| + -+-++.+.++.+++. |..+|....-.... .+.+..........+.+-.+.+.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~--- 232 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMK--- 232 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH---
Confidence 0 00111 0 111244677888875 76666432100000 00000000111223333222222
Q ss_pred hhhcCCCCCCccHHHHHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.++..|++.|++.+++...|..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 5567788888999888877765
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-26 Score=221.04 Aligned_cols=150 Identities=28% Similarity=0.450 Sum_probs=133.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+..|+++++.+ +|+||+++++++.+....|+|
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEEE
Confidence 88889999999999999999999999999999765432 122335677899999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccC
Confidence 9999 889999987665 79999999999999999999999999999999999999 6678899999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-28 Score=216.11 Aligned_cols=146 Identities=25% Similarity=0.352 Sum_probs=125.0
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
+-+..||.|+||+|++..++.+|+..|||.|+... .+.+.++++.|.+...+-.+.||||++||..-.++..||+||+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34567999999999999999999999999997653 3667789999999888877899999999999999999999999
Q ss_pred cCCCchHHHH-----HHcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 211 CAGGELFDRI-----IQRGHYTERKAADLTRIIVGVVEACH-SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 211 ~~~g~L~~~l-----~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|. .+|..+. .+...++|..+..+..-.+.||.||- .+.||||||||+|||| +..|.+||||||++..+
T Consensus 145 Md-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 145 MD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQL 218 (361)
T ss_pred Hh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhH
Confidence 95 3553332 23457899988888888999999996 5689999999999999 88899999999998654
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=219.77 Aligned_cols=186 Identities=19% Similarity=0.174 Sum_probs=152.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||++.+..+++.||+|++.... .......+.+|+++++.+ +||||+++++++.....+|+|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEE
Confidence 45899999999999999999999999999999886432 234457889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+++++|.+++...+.++...+..++.+++.+|.|||+ .+|+||||||+||++ +.++.++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhhc
Confidence 9999999999988887889999999999999999999997 699999999999999 667889999999987653222
Q ss_pred ceeeeeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+..| .-+-++.+.++.+++.|..+|..
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~ 204 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAF 204 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence 1111111111 12223457788888888877764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-26 Score=218.76 Aligned_cols=186 Identities=22% Similarity=0.293 Sum_probs=148.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
.+.|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.+|+||+++++++...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 356899999999999999999999999999999986432 22356788999999986799999999998753
Q ss_pred -CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 202 -VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
..+|+||||+.+++|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||++ +.++.+||+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Dfg~ 157 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGV 157 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccCCC
Confidence 4689999999999999988763 358899999999999999999999999999999999999 6678899999999
Q ss_pred ccccCCCCceee------------eee------ccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTFRV------------WLR------LHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~~~------------~~~------~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+........... ++. ..| .-+-++.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~ 218 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 218 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 986543221110 110 011 12223457788888888877643
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=221.16 Aligned_cols=237 Identities=16% Similarity=0.185 Sum_probs=164.8
Q ss_pred ceeecceeccCCceEEEEEEEcCC-----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKAT-----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|++.++||+|+||.||+|.+..+ ++.||+|++.... .....+.+.+|+.++..+ +||||+++++++.+...
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCc
Confidence 488899999999999999987543 5789999986432 234456788999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 204 VHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
.++++||+.+++|.+++..+ ..++...+..++.|++.||.|||++||+||||||+|||+ +.
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~---~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV---FD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe---cC
Confidence 99999999999999988532 247788889999999999999999999999999999999 56
Q ss_pred CCCeEEEeeccccccCCCCceee----eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV----WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~----~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||+++.......... ..+..| . -+-++.+.++.+++. |...+....-.+.. .+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 67899999999887644332211 001111 1 111344667777775 55444321100000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
............+..-...+ -++++.+++.|.+..|+...|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li---~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNRQVLPCPDDCPAWVYTLM---LECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcCCcCCCCCCCCHHHHHHH---HHHhCCCcccCCCHHHHHHHhhC
Confidence 00000011112222222222 25778888889998888877653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-26 Score=215.56 Aligned_cols=235 Identities=20% Similarity=0.240 Sum_probs=167.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.++||+|+||.||+|.+. .+..+|+|.+... ......+.+|+++++.+ +|+||+++++++.+ ...|+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEE
Confidence 356999999999999999999854 4567999987643 23456788999999999 79999999999887 78899
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||+.+++|.+++... ..++...+..++.+++.||.|||+.|++||||||+||++ +..+.+||+|||++..+..
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIED 154 (260)
T ss_pred EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeeccC
Confidence 99999999999998763 357788889999999999999999999999999999999 6678899999999987654
Q ss_pred CCceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
+..... .....| .-+-++.+.++.+++. |..+|+........ .+............+.+-..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN 234 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHH
Confidence 322111 000111 1122344778888886 77777643321100 00000000001122222222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.+ -++++.+++.|++..++..+|..
T Consensus 235 ~i---~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 235 IM---MRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HH---HHHcccCcccCcCHHHHHHHHhc
Confidence 22 25677888888888888887754
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-26 Score=217.09 Aligned_cols=149 Identities=23% Similarity=0.332 Sum_probs=131.0
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++.+.||+|+||.||+|+.+. +.+.||+|.+.... .....+.+.+|+++++++ +|+||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCC
Confidence 458999999999999999999754 34679999875432 233567789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
..|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV---SSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE---eCCCcEEE
Confidence 9999999999999999987655 68999999999999999999999999999999999999 66788999
Q ss_pred Eeecccccc
Q 040003 274 IDFGLSMFF 282 (489)
Q Consensus 274 ~DFGla~~~ 282 (489)
+|||++...
T Consensus 159 ~~~~~~~~~ 167 (275)
T cd05046 159 SLLSLSKDV 167 (275)
T ss_pred ccccccccc
Confidence 999998754
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-26 Score=215.60 Aligned_cols=150 Identities=31% Similarity=0.500 Sum_probs=136.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|++.... ....+.+.+|+++++++ +||||+++++++.+...+|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEE
Confidence 56999999999999999999999999999999997542 23567889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhh
Confidence 9999999999988765 789999999999999999999999999999999999999 6678899999999987653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=218.73 Aligned_cols=143 Identities=22% Similarity=0.287 Sum_probs=121.5
Q ss_pred ceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 134 RKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
+.||+|+||.||+|... .++..+|+|.+.... .......+.+|+.+++.+ +||||+++++++.+....|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence 36999999999999754 355679999886442 233445788899999999 8999999999999999999999999
Q ss_pred CCCchHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 212 AGGELFDRIIQRG-----HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 212 ~~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
++|+|.+++.... ..+...+..++.|++.|+.|||+.||+||||||+||++ +..+.+||+|||+++..
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADLTVKIGDYGLSHNK 150 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEECCccccccc
Confidence 9999999986432 34566778899999999999999999999999999999 66788999999999754
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=218.04 Aligned_cols=238 Identities=20% Similarity=0.204 Sum_probs=168.7
Q ss_pred ceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|.+.+.||+|+||.||+|.+.. ++..+++|.+... .......+.+|+++++++ +|+||+++++++.....
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCc
Confidence 48899999999999999998543 4567889887532 334456788999999999 79999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 204 VHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
.++||||+.+++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---cc
Confidence 99999999999999998653 237888999999999999999999999999999999999 66
Q ss_pred CCCeEEEeeccccccCCCCceee----eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV----WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~----~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||++........... +....| . -+-++.+.++.+++. |..+|....-.... .+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 78899999999976543321110 001111 1 112344777888876 77765432110000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
............+.+-.+ -+-+++..|++.|++..++.+.|.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~---li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 239 TQGRVLERPRVCPKEVYD---IMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred hCCCCCCCCccCCHHHHH---HHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 000000001112222111 233667888899999999998887764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-26 Score=216.94 Aligned_cols=235 Identities=21% Similarity=0.236 Sum_probs=166.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|+++++||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++++ +|+||+++++++. ....|+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEE
Confidence 356999999999999999999865 567899999865432 235788999999999 7999999999874 457899
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||+.+++|.+++... ..++...+..++.|++.||+|||+.||+||||||+||++ +.++.++|+|||++..+..
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIED 154 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecCC
Confidence 99999999999988653 358888999999999999999999999999999999999 6678899999999987653
Q ss_pred CCceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... .....| .-+-++.+.++.+++. |..+|....-+... .+............+.+-.+
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYE 234 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 221110 000011 1122344777888886 77777543211100 00000000011112222222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
. +-+++..+++.|.+.+++..+|..
T Consensus 235 l---i~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 235 L---MRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred H---HHHHccCChhhCCCHHHHHHHhhc
Confidence 2 235678888888888888887754
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-26 Score=216.95 Aligned_cols=232 Identities=21% Similarity=0.205 Sum_probs=163.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEE-EeCCeEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAY-EDAVAVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~-~~~~~~~lv 207 (489)
.|++.+.||+|+||.||++... +..||+|.+... ...+.+.+|+.+++.+ +|+||+++++++ ......|+|
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-----chHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEEE
Confidence 5899999999999999999764 778999988532 2345788999999999 899999999975 455679999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+++++|.+++...+ .+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceecccc
Confidence 99999999999987654 37889999999999999999999999999999999999 66788999999999865432
Q ss_pred Cceee----------eeeccCC--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 286 LTFRV----------WLRLHFL--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 286 ~~~~~----------~~~~~yp--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
..... +....+. -+-++.+.++.+++. |+.+++...+.... .+.+..........+..-... +
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---i 232 (256)
T cd05082 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDV---M 232 (256)
T ss_pred CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHH---H
Confidence 21110 0011110 111244777888875 77766543321100 000000001111222222222 2
Q ss_pred HhhhcCCCCCCccHHHHHHHHHH
Q 040003 352 FKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+++..+++.|.+..++...|..
T Consensus 233 ~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 233 KQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred HHHhcCChhhCcCHHHHHHHHhc
Confidence 35677788889999998887754
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=215.27 Aligned_cols=148 Identities=26% Similarity=0.445 Sum_probs=132.5
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC---CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT---TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
|++++.||+|+||.||+|.. .+++.+|+|.+...... .......+.+|+++++++ +|+||+++++++.+....|+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred ccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEE
Confidence 78889999999999999986 47889999998654321 223446788999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||+.+++|.+++.+.+.+++..+..++.|++.+|.|||+.||+|+||||+||++ +.++.+||+|||++...
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRL 152 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhh
Confidence 99999999999999887889999999999999999999999999999999999999 67788999999999865
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-26 Score=216.50 Aligned_cols=234 Identities=19% Similarity=0.214 Sum_probs=163.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|.+. .+..+|+|.+..... ..+.+.+|+.+++++ +|+||+++++++. ....|+|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEEE
Confidence 56999999999999999999865 556799999875432 235688999999999 8999999999885 4568999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++... ..+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||++..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---eCCceEEeCCceeeeeccCc
Confidence 9999999999988653 358899999999999999999999999999999999999 56778999999999876443
Q ss_pred Cceee---eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... .....| .-+-.+.+.++.+++. |..+|....-.... .+............+..-.+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHE- 234 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH-
Confidence 21111 000011 1222344677777776 66666542210000 00000000001111221111
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+.+++..+++.|++..++...|..
T Consensus 235 --li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 235 --LMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --HHHHHcccCcccCcCHHHHHHHHhc
Confidence 1235677788888888888777653
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=214.22 Aligned_cols=233 Identities=20% Similarity=0.295 Sum_probs=170.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~l 206 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.+. .||||+++++++.+....|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 3788899999999999999999999999999986432 2344567889999999994 39999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+.+++|.+++.. +.+++..+..++.|++.+|.|||+.||+||||+|+||++ +..+.++|+|||++..+....
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV---TNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE---cCCCCEEEccCCceeecCCCc
Confidence 9999999999988754 578999999999999999999999999999999999999 667889999999998775433
Q ss_pred ceee------------eeecc--C--CCCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhh-hhccHHHHHHH
Q 040003 287 TFRV------------WLRLH--F--LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIA-ESLSEEEIAGL 348 (489)
Q Consensus 287 ~~~~------------~~~~~--y--pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l 348 (489)
.... .+... + .-+-++.+.++.+++.|..+|......... .+.......+. ...+.+-.+.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 235 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFV 235 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHH
Confidence 2111 11111 0 112234577888999998877543321111 11111000011 11233333333
Q ss_pred HHHHhhhcCCCCCCccHHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+ .++..|++.|++..|+..
T Consensus 236 ~---~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 236 A---ACLDEEPKERLSAEELLK 254 (277)
T ss_pred H---HHcCCCcccCcCHHHHhh
Confidence 3 467778888999888754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-26 Score=231.27 Aligned_cols=274 Identities=21% Similarity=0.311 Sum_probs=203.5
Q ss_pred eeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
..|.++||.|.||.||+|+.+..|+ .||||.++.. ..+..+..|+.|+.||.++ +||||++|.|.......+.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeEE
Confidence 4578899999999999999887664 6999998653 5677888999999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.|||++|+|..+|..+ |.|...++..+++-|..|++||-+.|+|||||-..|||+ +.+...|++||||++.+.++
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeecccC
Confidence 99999999999999765 789999999999999999999999999999999999999 78889999999999988543
Q ss_pred C-ceee----------------------------------eeeccC---CCCcchhHHHHHHHhcccccCCC-CCCCCCC
Q 040003 286 L-TFRV----------------------------------WLRLHF---LFFQKQRQSVLQTRLVRNLNEPG-SLWPDKV 326 (489)
Q Consensus 286 ~-~~~~----------------------------------~~~~~y---pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~ 326 (489)
. ..+. |-...| |||..++..++..|..| |..|. -+.|.
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-yRLPpPmDCP~-- 861 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-YRLPPPMDCPA-- 861 (996)
T ss_pred CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc-cCCCCCCCCcH--
Confidence 3 1111 112223 88888888888888766 33332 11111
Q ss_pred CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHH---------HHHHHHccCCCCCc
Q 040003 327 AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE---------IDGLMQAGDIDNSG 397 (489)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~---------i~~l~~~~D~d~~g 397 (489)
-+.+| +.+++-+|..-+....++...|.++-.++..-+ -..++..--.|...
T Consensus 862 -----------------aL~qL--MldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~~ 922 (996)
T KOG0196|consen 862 -----------------ALYQL--MLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFTP 922 (996)
T ss_pred -----------------HHHHH--HHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCcc
Confidence 12222 336667788889999999999888754442211 12233333344445
Q ss_pred ceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHH
Q 040003 398 TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTA 443 (489)
Q Consensus 398 ~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~ 443 (489)
..+..||+.++..- ..++.|. ..|+.+.+.+.++
T Consensus 923 f~sv~~WL~aIkm~-------rY~~~F~-----~ag~~s~~~V~q~ 956 (996)
T KOG0196|consen 923 FRSVGDWLEAIKMG-------RYKEHFA-----AAGYTSFEDVAQM 956 (996)
T ss_pred cCCHHHHHHHhhhh-------HHHHHHH-----hcCcccHHHHHhh
Confidence 56778888776421 1223342 3566666666555
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=213.86 Aligned_cols=185 Identities=18% Similarity=0.315 Sum_probs=147.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~lv~ 208 (489)
|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+++++++ +|+||+++++.+.. ...+|+||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEEe
Confidence 8999999999999999999999999999999865432 334556788999999999 89999999998864 44689999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+++++|.+++... ..+++..+..++.+++.+|.+||++||+||||||+||++ +.++.+||+|||++..+....
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEecccC
Confidence 999999999988763 458999999999999999999999999999999999999 667889999999998764322
Q ss_pred ceee--eeeccC-----------C--CCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV--WLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~--~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ..+..| . -+-.+.+.++.+++.|...|..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 204 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA 204 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 1111 011111 0 1122446777888888776653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=193.34 Aligned_cols=145 Identities=38% Similarity=0.636 Sum_probs=136.2
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQ 415 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~ 415 (489)
...++++++++++++|..+|.|++|.|+..||..+|+.+|..+++.++.+++..+|. +++.|+|.+|+.+|.... ...
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~ 89 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD 89 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCC
Confidence 357899999999999999999999999999999999999999999999999999999 999999999999997654 556
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.++++..+|+.||+|+||+|+..||+.+|+.+| +++++++.|++.+|.|+||.|+|++|++++...+
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~ 158 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSP 158 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccC
Confidence 689999999999999999999999999999999 8999999999999999999999999999887643
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=217.49 Aligned_cols=152 Identities=25% Similarity=0.406 Sum_probs=131.8
Q ss_pred ceeecceeccCCceEEEEEEE----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--C
Q 040003 129 MYSLGRKLGQGQFGTTFLCVE----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--V 202 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~ 202 (489)
.|++++.||+|+||.||+|.. ..+++.||+|.+... ........+.+|+++++.+ +||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc--ccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCC
Confidence 478999999999999999974 457889999998643 2344556789999999999 899999999998775 5
Q ss_pred eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..|+||||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKA 158 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE---cCCCCEEECCCccccc
Confidence 789999999999999988654 358899999999999999999999999999999999999 5678899999999987
Q ss_pred cCCCC
Q 040003 282 FRPGL 286 (489)
Q Consensus 282 ~~~~~ 286 (489)
+....
T Consensus 159 ~~~~~ 163 (284)
T cd05079 159 IETDK 163 (284)
T ss_pred cccCc
Confidence 75443
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=217.06 Aligned_cols=184 Identities=19% Similarity=0.186 Sum_probs=143.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+|+.||+|.+..... . .....+..|+.++.+..+||||+++++++......|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-S-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-c-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 48899999999999999999999999999999875432 2 223456667776545448999999999999999999999
Q ss_pred eecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||++ |+|.+++.. ...+++..+..++.|++.||.|||++ +++||||||+|||+ +.++.+||+|||++..+.
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecccccccc
Confidence 9996 578776653 23689999999999999999999997 99999999999999 677889999999998764
Q ss_pred CCCcee-e----------eee-----ccC--CCCcchhHHHHHHHhcccccCC
Q 040003 284 PGLTFR-V----------WLR-----LHF--LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 284 ~~~~~~-~----------~~~-----~~y--pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.....+ . ++. ..| .-+-++.+.++.+++.|.++|.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 208 (283)
T cd06617 156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD 208 (283)
T ss_pred cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence 322111 0 111 111 1122345788888888887764
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=208.88 Aligned_cols=177 Identities=24% Similarity=0.481 Sum_probs=146.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.+.|++.+++|+|.|+.||.|....+.+.++||+++.- ..+.+.||+.||..|++|||||++++...+. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 35699999999999999999999999999999998642 3478899999999998899999999998764 457
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
.||+||+.+.+...+. ..++..+++.++.+++.||.|||+.||+|||+||.|+++.. ....++|+|+|||.++.+
T Consensus 111 aLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh--~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech--hhceeeeeecchHhhcCC
Confidence 7999999887665443 35788899999999999999999999999999999999943 455699999999999999
Q ss_pred CCceeeeeeccC---------------CCCcchhHHHHHHHhccc
Q 040003 285 GLTFRVWLRLHF---------------LFFQKQRQSVLQTRLVRN 314 (489)
Q Consensus 285 ~~~~~~~~~~~y---------------pf~~~~~~~~~~~i~~~~ 314 (489)
+..+.+-....| -.+.++.+|++..++-.+
T Consensus 186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrk 230 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 230 (338)
T ss_pred CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhcc
Confidence 999887222221 233456688777665443
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=215.41 Aligned_cols=151 Identities=26% Similarity=0.460 Sum_probs=137.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|.+.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.+ +|+||+++++++.....+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEE
Confidence 388899999999999999999999999999998765432 45678899999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++...+.+++..+..++.+++.||.|||++||+||||||+||++ +..+.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKN 151 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEcccccccccCC
Confidence 999999999999877778999999999999999999999999999999999999 6678899999999987653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=215.50 Aligned_cols=153 Identities=25% Similarity=0.445 Sum_probs=131.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-----
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE----- 199 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----- 199 (489)
...+.|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+.+||||+++++++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 34567999999999999999999999999999999875421 123567789999999967999999999873
Q ss_pred eCCeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
.....|+||||++|++|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+||++ +.++.+||+|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL---TTEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE---CCCCCEEEcc
Confidence 45679999999999999987753 2468889999999999999999999999999999999999 6677899999
Q ss_pred eccccccCC
Q 040003 276 FGLSMFFRP 284 (489)
Q Consensus 276 FGla~~~~~ 284 (489)
||+++....
T Consensus 168 fg~~~~~~~ 176 (286)
T cd06638 168 FGVSAQLTS 176 (286)
T ss_pred CCceeeccc
Confidence 999987643
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=216.67 Aligned_cols=186 Identities=27% Similarity=0.326 Sum_probs=151.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
....|++.+.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++.....+|
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEE
Confidence 34569999999999999999999999999999999865432 2346788999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+.+++|..++.. ..+++..+..++.+++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 93 VVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhcccc
Confidence 99999999999987754 468999999999999999999999999999999999999 66788999999998876543
Q ss_pred Cceee--eeeccC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... ..+..| . -+-++.+.++.+++.|..+|..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~ 217 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 22111 011111 1 1123447788888888877753
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=222.04 Aligned_cols=150 Identities=27% Similarity=0.444 Sum_probs=131.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|++..+|+.||+|.+..... .......+.+|+++++++ +||||+++++++.+...+|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEE
Confidence 38889999999999999999999999999999865432 222335677899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+. ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++.+..
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~ 151 (284)
T cd07839 79 EYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGI 151 (284)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCC
Confidence 9996 478777765 4678999999999999999999999999999999999999 6678899999999986643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=217.12 Aligned_cols=152 Identities=27% Similarity=0.425 Sum_probs=132.6
Q ss_pred cceeecceeccCCceEEEEEEEcC----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 201 (489)
+.|++.+.||+|+||.||+|.... +++.+|+|++..... ....+.+.+|+++++.+ +|+||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE--EQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc--hHHHHHHHHHHHHHHhC-CCCChheEEeeeecCCC
Confidence 347888999999999999998653 478999999875432 24567899999999999 89999999999877 5
Q ss_pred CeEEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
...|+||||+++++|.+++.... .++...+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEccccccc
Confidence 68999999999999999987654 58999999999999999999999999999999999999 667889999999999
Q ss_pred ccCCC
Q 040003 281 FFRPG 285 (489)
Q Consensus 281 ~~~~~ 285 (489)
.....
T Consensus 158 ~~~~~ 162 (284)
T cd05038 158 VLPED 162 (284)
T ss_pred ccccC
Confidence 87643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-28 Score=235.47 Aligned_cols=186 Identities=25% Similarity=0.367 Sum_probs=165.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
++++..||-||||.|-++........+|+|++++..+.+..+.+.+..|-.||..+ +.|.||++|..|.+..++|++||
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhhhHH
Confidence 55667799999999999987766667999999999998888889999999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce-
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF- 288 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~- 288 (489)
-|-||.|...|..+|.|.+..++.++.-++.|++|||++|||.|||||+|+|| +.+|.+||.|||+|+.+..+...
T Consensus 501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~KTw 577 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRKTW 577 (732)
T ss_pred hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCcee
Confidence 99999999999999999999999999999999999999999999999999999 88999999999999999877654
Q ss_pred eeeeeccC---------------CCCcchhHHHHHHHhcccccCCCCC
Q 040003 289 RVWLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 289 ~~~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
+...+..| .||. .+.++.+++.|.++|.+..
T Consensus 578 TFcGTpEYVAPEIILnKGHD~avDyWa--LGIli~ELL~G~pPFs~~d 623 (732)
T KOG0614|consen 578 TFCGTPEYVAPEIILNKGHDRAVDYWA--LGILIYELLTGSPPFSGVD 623 (732)
T ss_pred eecCCcccccchhhhccCcchhhHHHH--HHHHHHHHHcCCCCCCCCc
Confidence 33334344 4544 4788899999999998643
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=215.13 Aligned_cols=151 Identities=25% Similarity=0.430 Sum_probs=134.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-------CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-------TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence 388899999999999999999999999999988642211 112245688999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
...++||||+.+++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||+++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccccc
Confidence 9999999999999999999888889999999999999999999999999999999999999 6778899999999976
Q ss_pred cC
Q 040003 282 FR 283 (489)
Q Consensus 282 ~~ 283 (489)
..
T Consensus 158 ~~ 159 (272)
T cd06629 158 SD 159 (272)
T ss_pred cc
Confidence 53
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=217.96 Aligned_cols=186 Identities=22% Similarity=0.280 Sum_probs=150.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.++||+|+||.||+|.+..+++.||+|.+.+.... ....+.+.+|+++++.+ +||||+++++++.+....|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEEE
Confidence 589999999999999999999989999999998654322 23446688999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|..+....+.+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.+||+|||++..+......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCccc
Confidence 999998888776666678999999999999999999999999999999999999 66788999999999876443221
Q ss_pred e-e-eeecc------------CC--CCcchhHHHHHHHhcccccCCC
Q 040003 289 R-V-WLRLH------------FL--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~-~-~~~~~------------yp--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. . +.... +. -+..+.+.++.+++.|...|+.
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 1 0 11111 11 1123447788888888776653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-27 Score=232.70 Aligned_cols=225 Identities=22% Similarity=0.246 Sum_probs=171.7
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCC
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGG 214 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g 214 (489)
+||+|+||+||.|+++.|....|||.|..+ .....+-+..||.+.++| +|.|||+++|++.+++++-|.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 599999999999999999999999999653 345667889999999999 7999999999999999999999999999
Q ss_pred chHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-
Q 040003 215 ELFDRIIQR-GHY--TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV- 290 (489)
Q Consensus 215 ~L~~~l~~~-~~~--~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~- 290 (489)
+|.++|... |++ .+.....+.+||+.||.|||++.|||||||-+|+|++ +-.|.+||.|||-++.+..-.-.+.
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCccccc
Confidence 999999754 666 7888999999999999999999999999999999996 4578999999999988754333222
Q ss_pred -eeeccC---------------CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcc----hhhhhhccHHHHHHHHH
Q 040003 291 -WLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGD----RVIAESLSEEEIAGLKE 350 (489)
Q Consensus 291 -~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 350 (489)
.++.+| +-+-++.+|.+-++-.|+++|-.-..|... .-+.+. .-++..++.+....+.
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-MFkVGmyKvHP~iPeelsaeak~Fil- 813 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-MFKVGMYKVHPPIPEELSAEAKNFIL- 813 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-hhhhcceecCCCCcHHHHHHHHHHHH-
Confidence 222233 223345577777778888887654433321 111111 1233445554444444
Q ss_pred HHhhhcCCCCCCccHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~ 369 (489)
++|..|+..+.+..+|.
T Consensus 814 --rcFepd~~~R~sA~~LL 830 (1226)
T KOG4279|consen 814 --RCFEPDPCDRPSAKDLL 830 (1226)
T ss_pred --HHcCCCcccCccHHHhc
Confidence 56777777787777763
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=218.17 Aligned_cols=150 Identities=25% Similarity=0.376 Sum_probs=128.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe-----
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA----- 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~----- 203 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.+.+||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4899999999999999999999999999999886532 1222335678899999999667999999999987665
Q ss_pred EEEEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeec
Q 040003 204 VHVVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFG 277 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFG 277 (489)
.|+|||||.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~---~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV---DKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---ecCCCeEEEeecc
Confidence 8999999986 788887543 347999999999999999999999999999999999999 44 6789999999
Q ss_pred cccccC
Q 040003 278 LSMFFR 283 (489)
Q Consensus 278 la~~~~ 283 (489)
+++.+.
T Consensus 157 ~~~~~~ 162 (295)
T cd07837 157 LGRAFS 162 (295)
T ss_pred cceecC
Confidence 998654
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=213.19 Aligned_cols=186 Identities=23% Similarity=0.291 Sum_probs=151.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC--CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
|+..+.||+|+||+||+|....+++.|++|.+..... ......+.+.+|+++++.+ +|+||+++++++.+...+|+|
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEEE
Confidence 7778899999999999999998999999999865432 2234557889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+++++|.+++...+.+++..+..++.|++.||.|||+.||+|+||||+||++ +.++.+||+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceecccccc
Confidence 9999999999999877778999999999999999999999999999999999999 6678899999999987644321
Q ss_pred eee-ee-----------ecc-C--CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FRV-WL-----------RLH-F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~-~~-----------~~~-y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... .. ... + .-+-.+.+.++.+++.|..+|..
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~ 204 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQ 204 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 110 00 111 1 11112347788888888877653
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=227.51 Aligned_cols=165 Identities=26% Similarity=0.415 Sum_probs=143.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeC
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDA 201 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~ 201 (489)
.|..++.||+|+||.|++|.++.....|+||.|.+.++-.. ..+-.+-.||+||..|. .|+||++++++|++.
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 39999999999999999999999999999999987654321 12234567999999993 299999999999999
Q ss_pred CeEEEEEeec-CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELC-AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
+++||+||-- +|.+|++++..+..++|.++..|++|++.|+++||+.||||||||-+|+.+ +.+|-+||+|||.|.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsaa 718 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSAA 718 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccchh
Confidence 9999999965 346999999988999999999999999999999999999999999999999 888999999999999
Q ss_pred ccCCCCceeeeeeccC
Q 040003 281 FFRPGLTFRVWLRLHF 296 (489)
Q Consensus 281 ~~~~~~~~~~~~~~~y 296 (489)
....|..-..+.+..|
T Consensus 719 ~~ksgpfd~f~gtv~~ 734 (772)
T KOG1152|consen 719 YTKSGPFDVFVGTVDY 734 (772)
T ss_pred hhcCCCcceeeeeccc
Confidence 9887766555555554
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=213.03 Aligned_cols=186 Identities=24% Similarity=0.308 Sum_probs=155.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.++.++ +|+||+++++++......++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEE
Confidence 48889999999999999999999999999999865432 24567889999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+.+++|.+++...+.+++..+..++.|++.++.|||+ .|++||||+|+||++ +.++.++|+|||++..+.....
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCC
Confidence 999999999999887889999999999999999999999 999999999999999 6778899999999987754333
Q ss_pred ee--eeeeccC-----------CC--CcchhHHHHHHHhcccccCCCC
Q 040003 288 FR--VWLRLHF-----------LF--FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~--~~~~~~y-----------pf--~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. ......| ++ +-.+.+.++.+++.|.+++...
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 21 1111111 11 2234577888888888877544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-26 Score=218.64 Aligned_cols=153 Identities=35% Similarity=0.592 Sum_probs=139.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++++.+||||+++++++.+....++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 48999999999999999999999999999999977555555556788899999999934999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++...+.+++..+..++.|++.||.+||++|++|+||||+||++ +.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 82 EYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCC
Confidence 999999999999888889999999999999999999999999999999999999 6678899999999987653
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-26 Score=216.39 Aligned_cols=180 Identities=27% Similarity=0.393 Sum_probs=148.1
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||.|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+....|+||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 79999999999999999999999999876554455567899999999999 89999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee-eeeec
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR-VWLRL 294 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~ 294 (489)
|.+++.+...+++..+..++.|++.||.|||++|++|+||||+||++ +.++.+||+|||++.......... ...+.
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 156 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTP 156 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccccccccCCc
Confidence 99999887788999999999999999999999999999999999999 667889999999998775542111 01111
Q ss_pred cC---------C----CCcchhHHHHHHHhcccccCCC
Q 040003 295 HF---------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 295 ~y---------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.| . -+-.+.+.++.+++.|..++..
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE 194 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence 11 0 1112346677778777776653
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-26 Score=220.84 Aligned_cols=219 Identities=22% Similarity=0.284 Sum_probs=161.0
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
++-||.|+.|.||+|+.. ++.||||+++.- -..+|+-|++| +|||||.+.|+|...-.+|||||||.
T Consensus 129 LeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhc-cCcceeeEeeeecCCceeEEeeeccc
Confidence 567999999999999864 678999987421 13588899999 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 213 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
.|-|+..|+....+.......|..+|+.|+.|||.+.|||||||.-||||. .+..|||+|||-++.+....+.-.
T Consensus 196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STkMSFa 272 (904)
T KOG4721|consen 196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTKMSFA 272 (904)
T ss_pred cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999994 455699999999998765433211
Q ss_pred ----ee-----ecc-C--CCCcchhHHHHHHHhcccccCCCC-----CCCCCCCCCCCcchh-hhhhccHHHHHHHHHHH
Q 040003 291 ----WL-----RLH-F--LFFQKQRQSVLQTRLVRNLNEPGS-----LWPDKVAVPPIGDRV-IAESLSEEEIAGLKEMF 352 (489)
Q Consensus 291 ----~~-----~~~-y--pf~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~F 352 (489)
|. +.. . -.+.++.+.++-+++.|+++|.+- +|.-. ...+.. ++....+--.-.++
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG----sNsL~LpvPstcP~GfklL~K--- 345 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG----SNSLHLPVPSTCPDGFKLLLK--- 345 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc----CCcccccCcccCchHHHHHHH---
Confidence 11 111 0 122345588899999999988753 34211 111111 11111121122222
Q ss_pred hhhcCCCCCCccHHHHHHHHHH
Q 040003 353 KMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+++...+..+.+..++..-|.-
T Consensus 346 qcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 346 QCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred HHHhcCCCCCccHHHHHHHHhh
Confidence 4556667778877776555443
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=219.50 Aligned_cols=152 Identities=22% Similarity=0.353 Sum_probs=130.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.+.|++.+.||+|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++++ +|+||+++++++.+. ..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCeE
Confidence 356999999999999999999999999999999987543221 2223456899999999 899999999998765 568
Q ss_pred EEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++..+.
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeecC
Confidence 999999965 78877765 3568999999999999999999999999999999999999 667889999999998765
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 160 ~ 160 (309)
T cd07845 160 L 160 (309)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=217.07 Aligned_cols=235 Identities=20% Similarity=0.232 Sum_probs=165.2
Q ss_pred ceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|.+.++||+|+||.||+|... .++..+|+|.+... .......+.+|+++++.+ +|+||+++++++.+...
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVL-QHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCCc
Confidence 4788899999999999999743 35678999987542 345567899999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 204 VHVVMELCAGGELFDRIIQRG---------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
.|+||||+.+++|.+++...+ .+++..+..++.|++.|+.|||++||+||||||+|||+ +.+
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~---~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV---GQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE---cCC
Confidence 999999999999999987643 47888899999999999999999999999999999999 567
Q ss_pred CCeEEEeeccccccCCCCceee----eeeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCC
Q 040003 269 APLKTIDFGLSMFFRPGLTFRV----WLRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVP 329 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~ 329 (489)
+.+||+|||+++.......... .....| . -+.++.+.++.+++. |..+|....-.... .+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 8899999999976543222111 001111 1 122344677777775 66655332110000 000
Q ss_pred CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 330 PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
...........+.. +..+ +..++..|+..|.+.+|+...|.
T Consensus 239 ~~~~~~~~~~~~~~-~~~l--i~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 239 QGRELERPRTCPPE-VYAI--MQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cCccCCCCCCCCHH-HHHH--HHHHccCChhhCCCHHHHHHHHh
Confidence 00000011122222 2222 23567788888999999887664
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=214.77 Aligned_cols=236 Identities=22% Similarity=0.249 Sum_probs=166.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.++||+|+||.||+|.+. .++.+|+|.+..... ....+.+|+.+++++ +|+||+++++++......|+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEE
Confidence 356999999999999999999875 457899999875432 235688999999999 79999999999999899999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||+.+++|.+++... ..++...+..++.+++.|+.|||++||+||||||+||++ +.++.+||+|||++..+..
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLARLIED 155 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECccccceeccc
Confidence 99999999999998764 368899999999999999999999999999999999999 6678899999999987653
Q ss_pred CCceee---eeeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... .....| + -+-++.+.++.+++. |..+|......... .+............+.+ ..
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 234 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEE-LY 234 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHH-HH
Confidence 211000 000111 0 111233667777776 77666532210000 00000000001111111 11
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.-+.+++..+++.|.+.+|+...|..
T Consensus 235 --~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 235 --DLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --HHHHHHcccCcccCCCHHHHHHHHhc
Confidence 12345677888888888888777643
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=221.07 Aligned_cols=187 Identities=26% Similarity=0.333 Sum_probs=147.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-----V 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~ 202 (489)
..|.+.+.||+|+||+||+|++..+++.||||.+.... ........+.+|+.+++.+ +|+||+++++++... .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhc-CCCCccchHHheecccccccC
Confidence 46999999999999999999999999999999986532 2233445677899999999 899999999987644 3
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
..|+||||+. ++|.+++...+.+++..+..++.|++.||.|||+++|+||||||+|||+ +.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCcccccc
Confidence 5899999995 6899888877889999999999999999999999999999999999999 66788999999999876
Q ss_pred CCCCceee--eeecc------------C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 283 RPGLTFRV--WLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 283 ~~~~~~~~--~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
........ ..+.. + .-+-++.+.++.+++.|...|+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 159 SEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred CCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 54321110 11111 1 111234467777777777766543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=214.48 Aligned_cols=238 Identities=21% Similarity=0.230 Sum_probs=164.2
Q ss_pred cceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|.+.++||+|+||.||+|.+... ...||+|..... ......+.+.+|+.+++.+ +||||+++++++.+ ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--TSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc--CCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCc
Confidence 4588999999999999999987654 356899987543 2245567889999999999 79999999998876 467
Q ss_pred EEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+.+|+|.+++.... .++...+..++.+++.||.|||++|++||||||+|||+ +..+.+||+|||+++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV---SSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE---ecCCCeEEccCceeeecc
Confidence 89999999999999987643 58999999999999999999999999999999999999 567789999999998764
Q ss_pred CCCceeee---eeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHH
Q 040003 284 PGLTFRVW---LRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~~---~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 345 (489)
....+... ....| . -+-++.+.++.+++. |..+|....-.... .+...........++.+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 238 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHH
Confidence 43221110 00011 1 112234666666663 66665432211000 0000000001112222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..+. +++..+++.|.+..|+...|..+
T Consensus 239 ~li~---~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 239 SLMT---KCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred HHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 2222 45677888888888888877664
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=216.51 Aligned_cols=232 Identities=22% Similarity=0.297 Sum_probs=167.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+.+.+|+.+++++ +||||+++++++......|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEE
Confidence 45888899999999999999999999999999986432 234557889999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+++|.+++. .+.+++..+..++.+++.|+.|||++||+|+||||+||++ +.++.+||+|||++..+.....
T Consensus 81 ~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 81 MEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEccCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE---eCCCCEEEccccccccccCcch
Confidence 99999999998775 4578999999999999999999999999999999999999 5677899999999987654321
Q ss_pred eee--eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHH
Q 040003 288 FRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 288 ~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
... .....| .+ +-.+.+.++.+++.|..++.... +... .+.......+....+.+-.+.+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li-- 233 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH-PMRVLFLIPKNSPPTLEGQYSKPFKEFV-- 233 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc-hhhHHhhhhcCCCCCCCcccCHHHHHHH--
Confidence 111 011111 11 11234778888888877664321 1100 0000000011111222222222
Q ss_pred HHhhhcCCCCCCccHHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~ 370 (489)
-.++..+++.|.+..|+..
T Consensus 234 -~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 234 -EACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -HHHccCCcccCcCHHHHHH
Confidence 2466778888888888765
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=211.74 Aligned_cols=199 Identities=22% Similarity=0.319 Sum_probs=157.5
Q ss_pred cccccccccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-C----C
Q 040003 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-P----N 190 (489)
Q Consensus 116 ~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-p----n 190 (489)
|..+-.....+..+|.+.+.+|+|+||.|-.|++..++..||+|+++.- ....+..+-|+++|.++..+ | -
T Consensus 77 GH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~r 152 (415)
T KOG0671|consen 77 GHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFR 152 (415)
T ss_pred ceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceE
Confidence 4444455566678899999999999999999999999999999998632 34556677899999999433 2 3
Q ss_pred eeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC--
Q 040003 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-- 266 (489)
Q Consensus 191 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-- 266 (489)
+|.+.+||...++.|||+|.+ |.++++++..++ +++...++.+..|++.++.+||+++++|-||||+|||+.+.+
T Consensus 153 cv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 153 CVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred EEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceE
Confidence 788999999999999999998 679999998754 689999999999999999999999999999999999996421
Q ss_pred ---------------CCCCeEEEeeccccccCCCCceeeeeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 267 ---------------EEAPLKTIDFGLSMFFRPGLTFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 267 ---------------~~~~~kl~DFGla~~~~~~~~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
....|||+|||.|++-.... .+.+.+++| |=+-++.+||+-++..|..-|.
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccCc-ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 13469999999999876555 334555555 3334455666666666665555
Q ss_pred CC
Q 040003 319 GS 320 (489)
Q Consensus 319 ~~ 320 (489)
..
T Consensus 311 tH 312 (415)
T KOG0671|consen 311 TH 312 (415)
T ss_pred cC
Confidence 43
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=202.74 Aligned_cols=235 Identities=23% Similarity=0.231 Sum_probs=173.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----CC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-----AV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-----~~ 202 (489)
++|++.+.||+|||+.||++....+++.||+|+|.-. ..++.+..++||+..+++ +||||++++++... ..
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCce
Confidence 5799999999999999999999999999999999654 356778899999999999 89999999887643 34
Q ss_pred eEEEEEeecCCCchHHHHHHc---C-CCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 AVHVVMELCAGGELFDRIIQR---G-HYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~---~-~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
..||++.|...|+|.+.+... | .+++.++..|+.+|+.||++||+.. ++||||||+|||+ ...+.++|.||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl---s~~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL---SDSGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe---cCCCceEEEec
Confidence 599999999999999998643 3 6899999999999999999999999 9999999999999 55778999999
Q ss_pred ccccccCCCCceee-----------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCC-
Q 040003 277 GLSMFFRPGLTFRV-----------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV- 326 (489)
Q Consensus 277 Gla~~~~~~~~~~~-----------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 326 (489)
|.+....-...-.. +++.....| +.+++++.++-|.-+|....-....
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIW--SLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIW--SLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchh--hhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 99876542111000 122222333 4488888888887777533221111
Q ss_pred --CCCCCcchhhh--hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 --AVPPIGDRVIA--ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 --~~~~~~~~~~~--~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
++... ...++ ...++.-.+.++ .++-+|+..|.+..||..-+..+
T Consensus 252 aLAv~n~-q~s~P~~~~yse~l~~lik---~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 252 ALAVQNA-QISIPNSSRYSEALHQLIK---SMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred EEeeecc-ccccCCCCCccHHHHHHHH---HHhcCCcccCCCHHHHHHHHHhh
Confidence 11110 00011 123333333333 45778888899999987766543
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=214.80 Aligned_cols=185 Identities=25% Similarity=0.389 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++...... ......+.+|+.+++++ +||||+++++++......|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEe
Confidence 388999999999999999999999999999998765422 33456788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+ +++|.+++... ..+++..++.++.||+.+|.|||++||+|+||||+||++ +..+.++|+|||++........
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCCC
Confidence 999 99999988653 568999999999999999999999999999999999999 6678899999999987754331
Q ss_pred --e-ee----------eeec--cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 288 --F-RV----------WLRL--HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 --~-~~----------~~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+ .. ++.+ .+ .-+-++.+.++.+++.|...|..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 203 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG 203 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence 1 11 1111 11 11223457788888888665543
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=212.39 Aligned_cols=144 Identities=28% Similarity=0.420 Sum_probs=123.9
Q ss_pred eeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||+|.+. .++..||+|++... ......+.+.+|+.+++++ +||||+++++++.. ...|+||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE--NEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc--cChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 4899999999999765 44567999988653 2344556789999999999 89999999998864 57899999999
Q ss_pred CCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 213 GGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 213 ~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+++|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~ 148 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGAD 148 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCC
Confidence 9999998875 4578999999999999999999999999999999999999 66788999999999866443
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-25 Score=210.46 Aligned_cols=186 Identities=23% Similarity=0.273 Sum_probs=152.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||.|+||+||+|....++..+|+|++...... .....+.+|+.+|+.+ +|+||+++++.+......|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEE
Confidence 589999999999999999999989999999998654322 2567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||+.+++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhccC
Confidence 999999999998763 458999999999999999999999999999999999999 66788999999999877644
Q ss_pred Ccee----e--eeec------------cCC--CCcchhHHHHHHHhcccccCCCC
Q 040003 286 LTFR----V--WLRL------------HFL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 286 ~~~~----~--~~~~------------~yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... . ..+. .+. -+-++.+.++.+++.|..+|...
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 210 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY 210 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence 3221 0 0111 111 11234477888888888777543
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=212.34 Aligned_cols=233 Identities=21% Similarity=0.328 Sum_probs=161.1
Q ss_pred eecceeccCCceEEEEEEEc----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEK----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
++.+.||.|.||.||+|... ..+..|+||.+.. .......+.+.+|+++++++ +||||+++++++......++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~--~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP--SSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST--TSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc--ccccccceeeeecccccccc-cccccccccccccccccccc
Confidence 45678999999999999987 4567899999943 23455678899999999999 89999999999998888999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||.+|+|.++|... ..++......++.||+.||.|||+++|+|+||+++|||+ +.++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill---~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL---DSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE---ETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc
Confidence 99999999999999886 678999999999999999999999999999999999999 6677899999999988743
Q ss_pred CCceee----eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCC-CCCCCCcchhhhhhccHHHH
Q 040003 285 GLTFRV----WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDK-VAVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 285 ~~~~~~----~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 345 (489)
...... .....| .+.. .+.+.++.+++. +..++....-... ..+.+..........+..-.
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIY 235 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccchhHHHH
Confidence 322211 111111 0111 133667777777 5555543210000 00000000111122233322
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l 372 (489)
. -+-.+++.|++.|.+..|+...|
T Consensus 236 ~---li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 236 S---LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp H---HHHHHT-SSGGGS--HHHHHHHH
T ss_pred H---HHHHHcCCChhhCcCHHHHHhcC
Confidence 2 24477888999999999886644
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=213.24 Aligned_cols=150 Identities=30% Similarity=0.515 Sum_probs=133.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++++ +||||+++++++..+...|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEE
Confidence 45888999999999999999999899999999886432 234456788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+.+++|.+++. .+.++...+..++.+++.++.+||+.||+|+||||+||++ +.++.++|+|||++..+..
T Consensus 81 ~e~~~~~~l~~~i~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 81 MEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTD 153 (277)
T ss_pred EEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceeccc
Confidence 99999999998875 4578999999999999999999999999999999999999 6678899999999976644
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=215.31 Aligned_cols=150 Identities=23% Similarity=0.361 Sum_probs=130.8
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++++ +||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEF-DHPNIVKLLGVCAVGK 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC--cCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCC
Confidence 459999999999999999998753 6788999998643 2344456788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Ni 260 (489)
..|+||||+.+|+|.+++.... .+++..+..++.|++.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999986432 367778899999999999999999999999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+ +.++.+||+|||++..+.
T Consensus 162 l~---~~~~~~~l~dfg~~~~~~ 181 (288)
T cd05050 162 LV---GENMVVKIADFGLSRNIY 181 (288)
T ss_pred Ee---cCCCceEECccccceecc
Confidence 99 667889999999998654
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=211.67 Aligned_cols=187 Identities=25% Similarity=0.315 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|.+..+++.+|+|.+...... ......+.+|+++|+.+ +||||+++++.+......++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEE
Confidence 388999999999999999999999999999999765433 34567889999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+++++|.+++... ..+++..+..++.+++.++.|||++||+||||||+||++.. ....+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccCCCceecCCCc
Confidence 999999999998764 34889999999999999999999999999999999999932 34468999999998765432
Q ss_pred ceee-eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... +....| .-+-++.+.++.+++.|...|..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 203 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA 203 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCccc
Confidence 2111 111111 11223446777788877766643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=214.23 Aligned_cols=151 Identities=30% Similarity=0.499 Sum_probs=133.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeeccc--CCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK--LTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~--~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 204 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .........+.+|+++++++ +|+||+++++++.+. ..+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCEE
Confidence 4999999999999999999999999999999875422 12234567889999999999 799999999998764 568
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++||||+.+++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECccccccccc
Confidence 9999999999999999877788999999999999999999999999999999999999 667789999999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=212.36 Aligned_cols=149 Identities=32% Similarity=0.507 Sum_probs=132.4
Q ss_pred eecceeccCCceEEEEEEEcCCC----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+..|+.+++.+ +|+||+++++++.+....|+
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEE
Confidence 46788999999999999998766 899999986442 223567889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||+.+++|.+++..... +++..+..++.|++.||.+||+.||+||||||+||++ +.++.+||+|||++.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceeccc
Confidence 9999999999999876543 8999999999999999999999999999999999999 6677899999999987765
Q ss_pred C
Q 040003 285 G 285 (489)
Q Consensus 285 ~ 285 (489)
.
T Consensus 156 ~ 156 (258)
T smart00219 156 D 156 (258)
T ss_pred c
Confidence 4
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=216.29 Aligned_cols=186 Identities=25% Similarity=0.398 Sum_probs=150.0
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
|++.+.||+|+||.||+|.+. .+|+.||+|++...... .....+.+.+|+++++.+.+|+||+.+++++......|
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 788999999999999999874 47899999998753321 12234667889999999977999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+++++|.+++.....+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceecccc
Confidence 999999999999999888889999999999999999999999999999999999999 66788999999999876543
Q ss_pred Ccee---eeeeccC---------------CCCcchhHHHHHHHhcccccCC
Q 040003 286 LTFR---VWLRLHF---------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~---~~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
.... ......| .-+-++.+.++.+++.|..++.
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 2111 0111111 1112344778888888887764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=213.45 Aligned_cols=184 Identities=23% Similarity=0.368 Sum_probs=151.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+.+|+++++.+ +|+||+++++++.+...+|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEEE
Confidence 4888999999999999999999999999999986542 234456788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|.+++... .+++..+..++.|++.|+.|||+.+|+||||+|+||++ +.++.++|+|||+++.+......
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeecccccc
Confidence 999999999988654 78999999999999999999999999999999999999 66788999999999887643211
Q ss_pred e--eeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 289 R--VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~--~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. ...+..| .+ +-++.+.++.+++.|..+|..
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~ 200 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSD 200 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 1 1111111 11 113447788888888887753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=213.06 Aligned_cols=234 Identities=19% Similarity=0.211 Sum_probs=161.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+..+||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+++++.+ +|+||+++++++.. ...|+|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKL-RHDKLVPLYAVVSE-EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-CCcEEE
Confidence 4599999999999999999987655 4699998764322 235678899999999 79999999998854 568999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+.+++|.+++... ..++...+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||+++....+
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCC
Confidence 9999999999998654 247888899999999999999999999999999999999 67788999999999876433
Q ss_pred Cceee---eeeccC-----------C--CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF-----------L--FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y-----------p--f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... ..+..| . -+-.+.+.++.+++. |..+|.+..-.... .+............+..-.+.
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHEL 235 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHH
Confidence 21110 001111 0 111234667777776 77666543210000 000000000111122221122
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+ -+++..|++.|.+.+++.+.|+.
T Consensus 236 i---~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 236 M---KLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred H---HHHccCCcccCcCHHHHHHHHhc
Confidence 2 24677788888888888877753
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=210.22 Aligned_cols=142 Identities=26% Similarity=0.412 Sum_probs=125.0
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCC
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGG 214 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g 214 (489)
.||+|+||.||+|... ++..+|+|.+.... .......+.+|+++++.+ +||||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 2 LLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred ccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 6899999999999864 67899999886432 334445788999999999 8999999999999999999999999999
Q ss_pred chHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 215 ELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 215 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|.+++... ..+.+..+..++.+++.+|.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~ 144 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQED 144 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceecc
Confidence 999988653 457899999999999999999999999999999999999 667889999999997654
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=219.92 Aligned_cols=239 Identities=16% Similarity=0.177 Sum_probs=165.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|+..+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-C
Confidence 358889999999999999999887776 46888775432 233345688999999999 899999999998754 5
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++++||+.+|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEccccccccc
Confidence 679999999999999987653 58889999999999999999999999999999999999 56678999999999876
Q ss_pred CCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........ .....| ++ +-++.+.++.+++. |..++....+.... .+............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTI- 238 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH-
Confidence 53322110 001111 11 11244666777664 65555432211100 0000000000011111
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.. ..-+..++..+++.+.++.|+...|.++.
T Consensus 239 ~~--~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 239 DV--YMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred HH--HHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 12 22245677788888999999888877653
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=212.03 Aligned_cols=186 Identities=24% Similarity=0.333 Sum_probs=149.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 206 (489)
.|++.+.||.|+||.||+|.+..++..||+|.+..... .....+.+.+|+++++.+ +||||+++++++.. ....|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEE
Confidence 38889999999999999999999999999999875443 345567889999999999 89999999998754 457899
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACH-----SLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH-----~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
+|||+.+++|.+++.. ...+++..+..++.+|+.||.||| +.+|+||||||+||++ +.++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili---~~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE---ecCCCEEEeccc
Confidence 9999999999998865 357899999999999999999999 8999999999999999 667889999999
Q ss_pred cccccCCCCceee--eeeccC-----------C--CCcchhHHHHHHHhcccccCCC
Q 040003 278 LSMFFRPGLTFRV--WLRLHF-----------L--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 278 la~~~~~~~~~~~--~~~~~y-----------p--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
++........... ..+..| . .+-.+.+.++.+++.|..++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 9988755442111 111111 1 1123446677788888776654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=211.06 Aligned_cols=151 Identities=26% Similarity=0.564 Sum_probs=134.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++++ +||||+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEE
Confidence 388999999999999999999999999999998754332 34456789999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+.+++|.+++.... .+++..+..++.|++.|+.|||++|++|+||+|+|||+ +.++.++|+|||++..+..
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCc
Confidence 9999999999886542 57889999999999999999999999999999999999 6677899999999987644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-26 Score=221.91 Aligned_cols=143 Identities=20% Similarity=0.185 Sum_probs=115.2
Q ss_pred cceeecceeccCCceEEEEEEEcC-CCcEEEEEEeecccC--CCHHHHHHHHHHHHHHHHhcCCCCeeE-EEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-TQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQ-IVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~~~avK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~-~~~~~~~~~~ 203 (489)
+.|.+.+.||+|+||+||+|+++. +++.||||++..... ......+.+.+|+++|++| +|+||+. ++++ +.
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~~----~~ 92 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLAT----GK 92 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEEc----CC
Confidence 459999999999999999999876 677789998753211 1233456799999999999 7999985 5432 46
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL-KPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDl-Kp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|||||||+|++|.. +. ... ...++.+++.+|.|||++||||||| ||+|||+ +.++.+||+|||+|+.+
T Consensus 93 ~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv---~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 93 DGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM---GPDGEAAVIDFQLASVF 162 (365)
T ss_pred cEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE---cCCCCEEEEECccceec
Confidence 899999999999963 21 111 1467899999999999999999999 9999999 56678999999999988
Q ss_pred CCC
Q 040003 283 RPG 285 (489)
Q Consensus 283 ~~~ 285 (489)
...
T Consensus 163 ~~~ 165 (365)
T PRK09188 163 RRR 165 (365)
T ss_pred ccC
Confidence 654
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-25 Score=214.98 Aligned_cols=238 Identities=20% Similarity=0.247 Sum_probs=168.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|...+.||+|+||.||+|.+..++..||+|.+.............+.+|+++++.+ +|||++++++++.+....|+
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 102 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWL 102 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEE
Confidence 34588899999999999999999999999999998765444455567889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||+.| +|.+.+.. ...+++..+..++.+++.|+.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 103 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 103 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPA 178 (317)
T ss_pred EEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCCc
Confidence 9999975 77777654 4568999999999999999999999999999999999999 66788999999998766543
Q ss_pred Cceee--------ee----eccCC--CCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCc-chhhhhhccHHHHHHHH
Q 040003 286 LTFRV--------WL----RLHFL--FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIG-DRVIAESLSEEEIAGLK 349 (489)
Q Consensus 286 ~~~~~--------~~----~~~yp--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~ 349 (489)
..... ++ .+.+. -+.++.+.++.+++.|..+|......... .+.... ........+..-.+.+.
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 258 (317)
T cd06635 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVD 258 (317)
T ss_pred ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHH
Confidence 22111 00 01111 11234477888888887765432110000 000000 00001112222122222
Q ss_pred HHHhhhcCCCCCCccHHHHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l 372 (489)
+++..++.+|++..++...+
T Consensus 259 ---~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 259 ---SCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ---HHccCCcccCcCHHHHHhCh
Confidence 46677888888888876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=216.58 Aligned_cols=185 Identities=24% Similarity=0.319 Sum_probs=148.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||.|+||.||+|.+..+++.||||.+..... .......+.+|+++++++ +||||+++++++.+....|+|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEee
Confidence 8889999999999999999999999999998865332 222345788999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+. ++|..++.. .+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++..+.....
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCcc
Confidence 995 588888755 3568999999999999999999999999999999999999 6778899999999876543221
Q ss_pred ee--e----------eeec-c-C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FR--V----------WLRL-H-F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~--~----------~~~~-~-y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.. . ++.+ . + .-+-++.+.++.+++.|...|+..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 10 0 1111 1 1 112234577888999998877643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-26 Score=216.36 Aligned_cols=146 Identities=32% Similarity=0.463 Sum_probs=132.5
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||.|+||.||+|++..+++.+|+|++...........+.+.+|+++++++ +||||+++++.+......|+||||+.+++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 68999999999999999999999999765444445667899999999999 79999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.+++...+.+++..+..++.|++.||.|||++||+||||+|+||++ +.++.+||+|||++......
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccC
Confidence 99999887789999999999999999999999999999999999999 67788999999998865443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-25 Score=214.16 Aligned_cols=188 Identities=23% Similarity=0.326 Sum_probs=150.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|.+.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+++++.+ +||||+++++++.+....|
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEE
Confidence 345699999999999999999999999999999998755444555667889999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+. |+|.+.+.. .+.+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.+||+|||++.....
T Consensus 92 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 92 LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCC
Confidence 9999997 467666653 4568999999999999999999999999999999999999 6678899999999976643
Q ss_pred CCceee--------ee----eccC--CCCcchhHHHHHHHhcccccCC
Q 040003 285 GLTFRV--------WL----RLHF--LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 285 ~~~~~~--------~~----~~~y--pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
...... ++ .+.| .-+-++.+.++.+++.|..++.
T Consensus 168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~ 215 (307)
T cd06607 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (307)
T ss_pred CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence 322110 11 1111 1112344778888888876654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-25 Score=214.24 Aligned_cols=184 Identities=21% Similarity=0.224 Sum_probs=144.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.+ +|+||+++++++......|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEE
Confidence 459999999999999999999999999999999865432 12223567899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+. ++|...+... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCCC
Confidence 99995 6777766543 467888899999999999999999999999999999999 667889999999987543211
Q ss_pred ce-e-e----------eeec--cCC--CCcchhHHHHHHHhcccccCC
Q 040003 287 TF-R-V----------WLRL--HFL--FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 287 ~~-~-~----------~~~~--~yp--f~~~~~~~~~~~i~~~~~~~~ 318 (489)
.. . . ++.+ .+. -+-.+.+.++.+++.|...|.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 10 0 0 1111 111 112344678888888877664
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=216.85 Aligned_cols=152 Identities=24% Similarity=0.336 Sum_probs=132.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 205 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|.++..... ......+.+|+.+++++ +||||+++++++... ...|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEE
Confidence 3589999999999999999999999999999999754322 22334567899999999 799999999999877 8999
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+ +|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+..
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeeccC
Confidence 99999974 8988886543 58999999999999999999999999999999999999 6678899999999987654
Q ss_pred C
Q 040003 285 G 285 (489)
Q Consensus 285 ~ 285 (489)
.
T Consensus 159 ~ 159 (293)
T cd07843 159 P 159 (293)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=214.82 Aligned_cols=148 Identities=26% Similarity=0.354 Sum_probs=130.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.++.+++.||+|.+...... .....+.+|+++++.+ +|+||+++++++.+....|+|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEE
Confidence 4599999999999999999999999999999998654221 1223466899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||+.+ +|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAK 153 (291)
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECcccccccc
Confidence 999975 898888654 467899999999999999999999999999999999999 67788999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=209.47 Aligned_cols=143 Identities=28% Similarity=0.427 Sum_probs=127.5
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
++||+|+||.||+|.+.. ++.||+|.+..... ......+.+|+++++++ +|+||+++++++.+....|+||||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 369999999999999877 99999998865432 24567889999999999 899999999999999999999999999
Q ss_pred CchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 214 GELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 214 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++|.+++... ..++...+..++.+++.+|.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEE 144 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeecccccccc
Confidence 9999998653 467888999999999999999999999999999999999 667889999999998654
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6e-25 Score=208.66 Aligned_cols=154 Identities=27% Similarity=0.472 Sum_probs=139.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+++++++ +||||+++++++.+....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEE
Confidence 388899999999999999999999999999999765432 35667899999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||+.+++|.+++...+.+++..+..++.|++.+|.+||++||+||||||+||++ +.++.+||+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---CCCCCEEEeccccceecCCCcc
Confidence 999999999999887889999999999999999999999999999999999999 5678899999999988765443
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.4e-25 Score=207.77 Aligned_cols=183 Identities=24% Similarity=0.342 Sum_probs=150.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|.+... ...+.+.+|+++++.+ +||||+++++++.+...+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE-----EDLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH-----HHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEE
Confidence 4699999999999999999999988999999998643 1267899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+++|.+++.. ...+++..+..++.|++.|+.|||+.||+||||+|+||++ +.++.+||+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccCc
Confidence 999999999999865 3568999999999999999999999999999999999999 667889999999998775443
Q ss_pred ceeee--eeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 287 TFRVW--LRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~--~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... ....| .+. -++.+.++.+++.|..++..
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~ 201 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD 201 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 21111 11111 111 12346778888888777653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=213.36 Aligned_cols=186 Identities=23% Similarity=0.331 Sum_probs=147.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.++||+|++|.||+|++..+++.||+|.+..... ......+.+|+.+++.+ +|+||+++++++.+.+..|+|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEEe
Confidence 8899999999999999999999999999999875432 22345677899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 210 LCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 210 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|+.+ +|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCCc
Confidence 9975 888887654 358999999999999999999999999999999999999 667889999999997653321
Q ss_pred ce--eeeeeccC----------CC----CcchhHHHHHHHhcccccCCCCCC
Q 040003 287 TF--RVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 287 ~~--~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
.. ....+..| .+ +-++.+.++.+++.|...|....+
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 206 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN 206 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 10 00111111 01 112346778888888887765443
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-25 Score=217.28 Aligned_cols=179 Identities=24% Similarity=0.357 Sum_probs=137.0
Q ss_pred cceeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE--eCCeEEEEE
Q 040003 133 GRKLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE--DAVAVHVVM 208 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~~~~~lv~ 208 (489)
+++||+|+||+||+|++.. +++.||+|.+..... ...+.+|+++|+.+ +||||+++++++. ....+|+||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence 4689999999999999754 568899999864322 23567899999999 8999999999885 356789999
Q ss_pred eecCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEeecc
Q 040003 209 ELCAGGELFDRIIQR---------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDFGL 278 (489)
Q Consensus 209 e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DFGl 278 (489)
||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99864 787776421 247888899999999999999999999999999999999543 3467899999999
Q ss_pred ccccCCCCce-----eeeeeccC----------C----CCcchhHHHHHHHhcccccCC
Q 040003 279 SMFFRPGLTF-----RVWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 279 a~~~~~~~~~-----~~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~ 318 (489)
|+.+...... ..+.+..| . -+-++.+.++.+++.|...|.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 9876543211 00112122 1 122355788999999988775
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-25 Score=216.32 Aligned_cols=145 Identities=20% Similarity=0.260 Sum_probs=127.8
Q ss_pred ecceeccC--CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 132 LGRKLGQG--QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 132 ~~~~lG~G--~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
++++||+| +||+||+++++.+|+.||+|.+..... .....+.+.+|+++++.+ +||||++++++|...+..|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEe
Confidence 46789999 789999999999999999999865432 234456788899999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 210 LCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 210 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
||++|+|.+++..+ ..+++..+..++.|++.||.|||++|||||||||+|||+ +.++.++++|||.+..
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~ 150 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLS 150 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhc
Confidence 99999999998653 458999999999999999999999999999999999999 6677899999986543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-25 Score=210.38 Aligned_cols=180 Identities=22% Similarity=0.244 Sum_probs=142.6
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
..||+|+||.||+|.+..++..||+|.+... .....+.+.+|+.+++.+ +|+||+++++++......++||||+.+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCCC
Confidence 4799999999999999999999999988643 234557889999999999 899999999999999999999999999
Q ss_pred CchHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee
Q 040003 214 GELFDRIIQR-GHY--TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290 (489)
Q Consensus 214 g~L~~~l~~~-~~~--~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~ 290 (489)
++|.+++... +.+ ++..+..++.||+.||.|||++||+||||||+||++.. ..+.+||+|||++...........
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~dfg~~~~~~~~~~~~~ 167 (268)
T cd06624 90 GSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDFGTSKRLAGINPCTE 167 (268)
T ss_pred CCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecchhheecccCCCccc
Confidence 9999998764 445 78888899999999999999999999999999999932 256799999999976543211110
Q ss_pred ------------ee-ecc--C--CCCcchhHHHHHHHhcccccCCC
Q 040003 291 ------------WL-RLH--F--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ------------~~-~~~--y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
++ ... | .-+-.+.+.++.+++.|..++..
T Consensus 168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 11 111 1 11123446788888888777653
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-25 Score=211.50 Aligned_cols=185 Identities=23% Similarity=0.308 Sum_probs=148.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
.++|++.+.||+|+||.||+|.+..+++.+++|++.... .....+.+|+.+++++.+|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 356999999999999999999999899999999986532 234678899999999967999999999997644
Q ss_pred --eEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 --AVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.+|+||||+.+++|.+++.. ...+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~---~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---ccCCeEEECCC
Confidence 58999999999999988764 3578999999999999999999999999999999999999 66788999999
Q ss_pred ccccccCCCCceee--eeeccC------------------CCCcchhHHHHHHHhcccccCC
Q 040003 277 GLSMFFRPGLTFRV--WLRLHF------------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 277 Gla~~~~~~~~~~~--~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
|++........... ..+..| .-+.++.+.++.+++.|..+|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 219 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLC 219 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcc
Confidence 99876543221111 001011 1122344778888888887775
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=210.36 Aligned_cols=186 Identities=23% Similarity=0.310 Sum_probs=147.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 206 (489)
.|+..+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.+ +||||++++++|.+ ...+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEE
Confidence 4888999999999999999999999999999987542 224457789999999999 79999999998865 347899
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||++ +.++.+||+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeeccccccc
Confidence 9999999999887643 3458889999999999999999999999999999999999 56678999999998765
Q ss_pred CCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 283 RPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 283 ~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.............| .+. ..+.+.++.+++.|.+++...
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 156 VNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred cccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 43221111111111 111 123477888999998888755
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-25 Score=212.34 Aligned_cols=185 Identities=22% Similarity=0.281 Sum_probs=151.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.++.+++.+|+|.+.... .......+.+|+++++++ +||||+++++++.....+|+||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEE
Confidence 4788899999999999999999999999999987643 234557788999999999 6999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||+.+++|.+++... ..+++..+..++.|++.++.|||+ .|++||||||+||++ +.++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---NSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---CCCCCEEEeecccchhhHHHH
Confidence 999999999998765 788999999999999999999999 999999999999999 667889999999987664322
Q ss_pred ceeeeeec-----------cCCC--CcchhHHHHHHHhcccccCCC
Q 040003 287 TFRVWLRL-----------HFLF--FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~~~~~-----------~ypf--~~~~~~~~~~~i~~~~~~~~~ 319 (489)
......+. .|.+ +..+.+.++..++.|..++..
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 201 (265)
T cd06605 156 AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP 201 (265)
T ss_pred hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 11111111 1111 123457788888888877754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=222.28 Aligned_cols=186 Identities=23% Similarity=0.335 Sum_probs=145.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|++.+.. ........+.+|+++|+.+ +||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcccc
Confidence 4567999999999999999999999999999999986432 2334456788999999999 8999999999987653
Q ss_pred ---eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 ---AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.+|+||||+ +++|.+++. ...+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.+||+|||++
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill---~~~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccc
Confidence 468999999 778877664 4578999999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceeeeeecc------------CCC--CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRVWLRLH------------FLF--FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~------------ypf--~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.......... ..+.. +.. +-++.+.++.+++.|...|..
T Consensus 166 ~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 166 RQTDSEMTGY-VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cccccCcccc-ccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8664322110 00111 111 112336677778888776654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-26 Score=232.00 Aligned_cols=188 Identities=23% Similarity=0.395 Sum_probs=154.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----C
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-----A 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-----~ 201 (489)
.+.|++...||.|.+|.||+++++.+++..|+|++... ...-+++..|.+||+.++.|||++.++++|.. +
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~----~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT----EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC----ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 45699999999999999999999999999999997543 22335677899999999999999999999853 5
Q ss_pred CeEEEEEeecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
+++|||||||.||+..|+++. ..++.|..+..|++.++.||.+||.+.+||||||-.|||| +.++.|||+|||++
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL---T~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL---TENAEVKLVDFGVS 170 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE---eccCcEEEeeeeee
Confidence 789999999999999998865 3578999999999999999999999999999999999999 77888999999999
Q ss_pred cccCCCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 280 MFFRPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
.........+... -++|||...+.+-..+-....|+...+.|
T Consensus 171 aQldsT~grRnT~-iGtP~WMAPEViac~e~~d~tyd~R~D~W 212 (953)
T KOG0587|consen 171 AQLDSTVGRRNTF-IGTPYWMAPEVIACDESPDATYDYRSDLW 212 (953)
T ss_pred eeeecccccccCc-CCCcccccceeeecccCCCCCcccccchh
Confidence 9886554433322 35699998554444444444455556677
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-27 Score=250.75 Aligned_cols=238 Identities=22% Similarity=0.265 Sum_probs=179.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
++.-+|.-+..||.|.||.||.|.+..+|...|+|-|+-.... ......+.+|..+|..+ +|||+|++||+-.+...+
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhc-cCccccccCceeecHHHH
Confidence 3444577788999999999999999999999999998754433 44556788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|.||||+||+|.+.+...+..++...+.+..|++.|+.|||++|||||||||+||+| +.+|.+|++|||.|..+..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecC
Confidence 9999999999999988777778888888999999999999999999999999999999 7788999999999998876
Q ss_pred CC-ceee-----eeeccC----------------CCCcchhHHHHHHHhcccccCC--CCCCCCCCCCCCCcchhhhhhc
Q 040003 285 GL-TFRV-----WLRLHF----------------LFFQKQRQSVLQTRLVRNLNEP--GSLWPDKVAVPPIGDRVIAESL 340 (489)
Q Consensus 285 ~~-~~~~-----~~~~~y----------------pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 340 (489)
.. +... +++.-| .-+-++.+|++-++..|+-++. +..|.--..|..--...++..+
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~l 1466 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERL 1466 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhh
Confidence 53 1111 222222 1112344777777777765443 2333111111111223344456
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+-.+.|. .|+-.|+..+.+..+|..
T Consensus 1467 s~~g~dFle---~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1467 SSEGRDFLE---HCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred hHhHHHHHH---HHHhcCchhhhHHHHHHH
Confidence 666666665 567788888877766543
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=211.57 Aligned_cols=144 Identities=26% Similarity=0.393 Sum_probs=125.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||++. .+++.||+|.+... ...+.+.+|+.+++.+ +||||+++++++... ..|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-----VTAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc-----chHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEE
Confidence 359999999999999999986 46788999998542 1235788999999999 899999999998765 47999
Q ss_pred EeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.+++|.+++.... .++...+..++.|++.||.|||++|++||||||+|||+ +.++.+||+|||++....
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGS 151 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceecc
Confidence 99999999999987643 47888999999999999999999999999999999999 667889999999997654
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=210.33 Aligned_cols=186 Identities=22% Similarity=0.346 Sum_probs=164.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.++++||+|+|.+|.+++++.|.+.||+|++++......++...++.|-.+..+.++||.+|.+..+|+....+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 56999999999999999999999999999999999988888888999999999999998999999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc-CCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF-RPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~-~~~~ 286 (489)
.||+.||+|.-++.+..+++++.++.+...|+.||.|||++|||.||||.+|+|| +..|++||+|+|+++.- .+++
T Consensus 330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCCc
Confidence 9999999998888888899999999999999999999999999999999999999 88999999999999864 4554
Q ss_pred ceee-----------eeec-cC----CCCcchhHHHHHHHhcccccCC
Q 040003 287 TFRV-----------WLRL-HF----LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 287 ~~~~-----------~~~~-~y----pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
+... ++++ .| .||. .+.++.+++.|+-+|.
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwa--lgvlmfemmagrspfd 452 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWA--LGVLMFEMMAGRSPFD 452 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHH--HHHHHHHHHcCCCCcc
Confidence 4332 3332 23 3433 3778888888887775
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=211.93 Aligned_cols=187 Identities=22% Similarity=0.299 Sum_probs=144.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+++++++ +||||+++++++.+....|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEE
Confidence 359999999999999999999999999999999865432 223345678899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+. ++|.+++..... +++..+..++.||+.||+|||++||+||||||+||++.. ..+.+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCC
Confidence 99995 588887765433 577888899999999999999999999999999999942 3456999999999765322
Q ss_pred Cce-e-e----------eeeccCCC----CcchhHHHHHHHhcccccCCC
Q 040003 286 LTF-R-V----------WLRLHFLF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~-~-~----------~~~~~ypf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
... . . ++.+..++ +-.+.+.++.+++.|...|..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 110 0 0 11111111 112346778888888877754
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=213.02 Aligned_cols=239 Identities=17% Similarity=0.136 Sum_probs=165.9
Q ss_pred cceeecceeccCCceEEEEEEEcC----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~ 202 (489)
+.|++.+.||+|+||.||+|.+.. ++..|++|.+... ......+.+.+|+.+|+.+ +||||+++++++.. ..
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGE 82 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCC
Confidence 459999999999999999999876 3578999987532 3455567889999999999 89999999998765 57
Q ss_pred eEEEEEeecCCCchHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 203 AVHVVMELCAGGELFDRIIQR--------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
..++++||+.+++|.+++... ..+++..+..++.+++.||+|||+++|+||||||+|||+ +.++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE---cCCCcEEEC
Confidence 789999999999999998653 357899999999999999999999999999999999999 667889999
Q ss_pred eeccccccCCCCceee---------e-----e-eccC--CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchh
Q 040003 275 DFGLSMFFRPGLTFRV---------W-----L-RLHF--LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRV 335 (489)
Q Consensus 275 DFGla~~~~~~~~~~~---------~-----~-~~~y--pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~ 335 (489)
|||+++.+........ + + ...| .-+-++.+.++.+++. |..+|....-.... .+.......
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 239 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA 239 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCC
Confidence 9999987644322110 0 0 0001 1111234667777776 76666432100000 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.....+. .+.. -+..++..|++.|.+..|+...|..+
T Consensus 240 ~~~~~~~-~~~~--li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 240 QPINCPD-ELFA--VMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CCCcCCH-HHHH--HHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0011111 1211 22356667778888888888777654
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-25 Score=213.72 Aligned_cols=186 Identities=26% Similarity=0.336 Sum_probs=150.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
....|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+++.+ +||||+++++++......|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~ 92 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELW 92 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEE
Confidence 3457999999999999999999998899999999985432 23346788999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+++++|.+++.. ..+++..+..++.|++.|+.|||++||+||||||+||++ +.++.+||+|||++..+...
T Consensus 93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred EEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceeccccc
Confidence 99999999999998754 467889999999999999999999999999999999999 66788999999998766543
Q ss_pred Cceeeee--e-----------ccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRVWL--R-----------LHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~~~--~-----------~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
....... + ..+ .-+-++.+.++.+++.|..+|..
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~ 217 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3211100 0 111 11123447788888888887754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-25 Score=211.34 Aligned_cols=149 Identities=27% Similarity=0.448 Sum_probs=130.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe------C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED------A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~ 201 (489)
+.|++.+.||+|+||.||+|.+..+++.+|+|++... ......+..|+.+++++.+|+||+++++++.. .
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 91 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD 91 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence 4599999999999999999999999999999998643 23445688899999999779999999999853 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|+|||||.+|+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++
T Consensus 92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~dfg~~ 168 (282)
T cd06636 92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVS 168 (282)
T ss_pred CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCcch
Confidence 6789999999999999988653 357888899999999999999999999999999999999 66778999999998
Q ss_pred cccC
Q 040003 280 MFFR 283 (489)
Q Consensus 280 ~~~~ 283 (489)
....
T Consensus 169 ~~~~ 172 (282)
T cd06636 169 AQLD 172 (282)
T ss_pred hhhh
Confidence 7653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-25 Score=212.86 Aligned_cols=186 Identities=23% Similarity=0.325 Sum_probs=150.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+++++.+ +|+||+++++++...+..|+||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEEE
Confidence 59999999999999999999999999999999865432 233457789999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT- 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~- 287 (489)
||+.++.+..+......+++..+..++.+++.||.|||+.||+||||||+||++ +.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCccc
Confidence 999987776666555679999999999999999999999999999999999999 6688899999999987654432
Q ss_pred -ee-eeeeccC----------C----CCcchhHHHHHHHhcccccCCC
Q 040003 288 -FR-VWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 -~~-~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. .+.+..| . -+-.+.+.++.+++.|...|+.
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11 0111111 1 1122346778888888776653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=210.62 Aligned_cols=188 Identities=20% Similarity=0.253 Sum_probs=148.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC---
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--- 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 201 (489)
...+.|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++.+||||+++++++...
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 34567999999999999999999999999999999986432 22356778999999997799999999998653
Q ss_pred --CeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 202 --VAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
...|+||||+.+++|.+++.. ...+++..++.++.|++.||+|||+.||+||||||+||++ +.++.+||+|
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~d 171 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLVD 171 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEee
Confidence 468999999999999988753 3568999999999999999999999999999999999999 6677899999
Q ss_pred eccccccCCCCceee--eeeccC------------------CCCcchhHHHHHHHhcccccCCC
Q 040003 276 FGLSMFFRPGLTFRV--WLRLHF------------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 276 FGla~~~~~~~~~~~--~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
||++..+........ ..+..| .-+-++.+.++.+++.|..+|..
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~ 235 (291)
T cd06639 172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFD 235 (291)
T ss_pred cccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCC
Confidence 999886543221100 000111 11223457788888888877754
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=207.51 Aligned_cols=144 Identities=29% Similarity=0.412 Sum_probs=126.9
Q ss_pred ceeccCCceEEEEEEEcC-CC--cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 134 RKLGQGQFGTTFLCVEKA-TQ--KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~-~~--~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
++||+|+||.||+|.+.. .+ ..||+|.+...... ...+.+.+|+.+++++ +||||+++++++.+ ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEe
Confidence 368999999999998865 33 36999998765432 5667899999999999 89999999999988 899999999
Q ss_pred cCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 211 CAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 211 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||+++.+..
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~---~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL---ASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE---ecCCEEEeccccccccccc
Confidence 99999999987654 68899999999999999999999999999999999999 6668899999999988754
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=210.79 Aligned_cols=145 Identities=16% Similarity=0.182 Sum_probs=122.4
Q ss_pred ceeccCCceEEEEEEEcCCC----------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 134 RKLGQGQFGTTFLCVEKATQ----------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~----------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.||+|+||.||+|.+..++ ..+++|.+.... .....+.+|+.+|+.+ +||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQL-SHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcC-CCcchhheeeEEec-CC
Confidence 36999999999999998776 347777764332 1157788999999999 79999999999988 78
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC----CCCCeEEEeecc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ----EEAPLKTIDFGL 278 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~----~~~~~kl~DFGl 278 (489)
.|+||||+.+|+|.+++...+ .++...+..++.||+.||.|||++||+||||||+|||+.... ....+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 899999999999999997765 789999999999999999999999999999999999994322 112699999999
Q ss_pred ccccCC
Q 040003 279 SMFFRP 284 (489)
Q Consensus 279 a~~~~~ 284 (489)
+.....
T Consensus 155 a~~~~~ 160 (259)
T cd05037 155 PITVLS 160 (259)
T ss_pred cccccc
Confidence 987543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=222.40 Aligned_cols=140 Identities=19% Similarity=0.309 Sum_probs=125.7
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++++.||+|+||.||+|++..+++.||+|+..+. ....|+.+++++ +||||+++++++......|+||
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEEE
Confidence 499999999999999999999999999999975432 234699999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||+. ++|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++..
T Consensus 137 e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 137 PHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCcccccc
Confidence 9995 5888888653 568999999999999999999999999999999999999 67788999999999754
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=217.97 Aligned_cols=186 Identities=21% Similarity=0.327 Sum_probs=146.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.+++.+ +||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCcc
Confidence 3466999999999999999999999999999999986432 2334456778899999999 899999999988643
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|+|||||. ++|.+.+... +++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~~ 165 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 165 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCccc
Confidence 35799999996 4888877543 8899999999999999999999999999999999999 67788999999999
Q ss_pred cccCCCCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.......... ..+..| ++ +-++.+.++.+++.|...|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred eeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 87644322111 111112 11 123447788888888877754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=193.49 Aligned_cols=152 Identities=23% Similarity=0.310 Sum_probs=130.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
....+..||+|+||.|-+.++..+|...|+|.++... ..+...++++|+.+..+...+|.+|++||.+.+.+.+||.|
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 3455678999999999999999999999999997543 34566788899999888878999999999999999999999
Q ss_pred eecCCCchHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRI----IQRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l----~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|.|. .+|..+. .+.+.++|..+-.++..++.||.|||++ .|||||+||+|||+ +..|++|+||||++..+.
T Consensus 125 E~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 125 ELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceeeh
Confidence 9995 4664433 3456899999999999999999999975 89999999999999 888999999999998775
Q ss_pred CCC
Q 040003 284 PGL 286 (489)
Q Consensus 284 ~~~ 286 (489)
+..
T Consensus 201 dSi 203 (282)
T KOG0984|consen 201 DSI 203 (282)
T ss_pred hhh
Confidence 543
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=219.32 Aligned_cols=188 Identities=25% Similarity=0.318 Sum_probs=149.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE----eCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE----DAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~~ 203 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+|+.+ +||||+++++++. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-DVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-ccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCce
Confidence 56999999999999999999999999999999987542 2223456778899999999 7999999999875 3457
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccceeec
Confidence 899999995 5898888777789999999999999999999999999999999999999 678889999999997654
Q ss_pred CCCcee------eeeecc------------C--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 284 PGLTFR------VWLRLH------------F--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 284 ~~~~~~------~~~~~~------------y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
...... .+.+.. | .-+-++.+.++.+++.|...|....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~ 216 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC
Confidence 321100 011111 1 1222345788888888888886543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=218.10 Aligned_cols=186 Identities=23% Similarity=0.296 Sum_probs=148.6
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
...+.|.....||+|+||.||++.+..++..||||.+... .....+.+.+|+.+++.+ +|+||+++++.+...+..
T Consensus 19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~ 94 (292)
T cd06658 19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDEL 94 (292)
T ss_pred chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeE
Confidence 3445577778899999999999999999999999998543 234456788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+||||+.+++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..+..
T Consensus 95 ~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~~ 170 (292)
T cd06658 95 WVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSK 170 (292)
T ss_pred EEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhccc
Confidence 99999999999988764 4578999999999999999999999999999999999999 6678899999999976543
Q ss_pred CCceee--eeeccC---------CC----CcchhHHHHHHHhcccccCC
Q 040003 285 GLTFRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 285 ~~~~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
...... ..+..| ++ +-++.+.++.+++.|..+|.
T Consensus 171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 219 (292)
T cd06658 171 EVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF 219 (292)
T ss_pred ccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 222111 111111 11 11234677788888877664
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=217.62 Aligned_cols=153 Identities=25% Similarity=0.399 Sum_probs=132.0
Q ss_pred cccceee-cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHH-----------HHHHHHHHHHHHHHhcCCCCeeE
Q 040003 126 LKEMYSL-GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE-----------DVEDVRREIRIMHHLAGHPNVIQ 193 (489)
Q Consensus 126 ~~~~y~~-~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~-----------~~~~~~~E~~~l~~l~~hpniv~ 193 (489)
+.++|.. .+.||+|+||+||+|++..+++.||+|++......... ....+.+|+++++.+ +|+||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceee
Confidence 3455764 57799999999999999999999999998654322100 012467899999999 8999999
Q ss_pred EEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 194 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
+++++......|+||||+. |+|.+++.....+++..+..++.|++.||+|||+.||+||||||+||++ +.++.+||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~~~kl 160 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICKI 160 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCCCEEE
Confidence 9999999999999999996 5899998887889999999999999999999999999999999999999 66788999
Q ss_pred EeeccccccC
Q 040003 274 IDFGLSMFFR 283 (489)
Q Consensus 274 ~DFGla~~~~ 283 (489)
+|||++..+.
T Consensus 161 ~dfg~~~~~~ 170 (335)
T PTZ00024 161 ADFGLARRYG 170 (335)
T ss_pred CCccceeecc
Confidence 9999998664
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=214.87 Aligned_cols=182 Identities=23% Similarity=0.281 Sum_probs=146.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.....||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEE
Confidence 35666789999999999999999999999999865432 2346688999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+++++|..++. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+......
T Consensus 98 e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 98 EFLQGGALTDIVS-QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred ecCCCCCHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhccccccc
Confidence 9999999988664 4578999999999999999999999999999999999999 67788999999999765433221
Q ss_pred ee--eeeccC---------CC----CcchhHHHHHHHhcccccCC
Q 040003 289 RV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 289 ~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
.. ..+..| ++ +-++.+.++.+++.|..+|.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 218 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF 218 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11 111111 11 12344778888888877664
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-25 Score=210.94 Aligned_cols=151 Identities=26% Similarity=0.401 Sum_probs=126.6
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
|++.+.||+|+||.||+|.+. .+++.||||++.... ......+.+.+|+++++.+ +||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCc
Confidence 567889999999999999864 357899999986543 3445567889999999999 7999999999886532
Q ss_pred --eEEEEEeecCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 203 --AVHVVMELCAGGELFDRIIQR------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
..++++||+.+|+|.+++... ..++...+..++.|++.||.|||++||+||||||+|||+ +.++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEEC
Confidence 347899999999998877532 146888899999999999999999999999999999999 667889999
Q ss_pred eeccccccCCC
Q 040003 275 DFGLSMFFRPG 285 (489)
Q Consensus 275 DFGla~~~~~~ 285 (489)
|||+++....+
T Consensus 156 dfg~~~~~~~~ 166 (273)
T cd05074 156 DFGLSKKIYSG 166 (273)
T ss_pred cccccccccCC
Confidence 99999876543
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=208.81 Aligned_cols=182 Identities=20% Similarity=0.295 Sum_probs=141.3
Q ss_pred cceeeccee--ccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 128 EMYSLGRKL--GQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 128 ~~y~~~~~l--G~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.|++.+.+ |+|+||.||+++++.+++.+|+|.+....... .|+.+...+.+||||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 346666665 99999999999999999999999987543211 13333333337999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
+||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||++ +..+ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY---DRAKDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---eCCCCeEEEecCccceecCC
Confidence 999999999999999887789999999999999999999999999999999999999 4445 799999999986643
Q ss_pred CCceee--------ee-eccC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 285 GLTFRV--------WL-RLHF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~~~~--------~~-~~~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...... ++ ...| .-+-++.+.++.+++.|..+|...
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 209 (267)
T PHA03390 163 PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED 209 (267)
T ss_pred CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 322111 11 1111 112234577888899998877643
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-25 Score=214.88 Aligned_cols=189 Identities=24% Similarity=0.316 Sum_probs=146.0
Q ss_pred eeecceeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 205 (489)
|++.++||+|+||.||+|.+.. +++.||+|.+...........+.+.+|+.+++.+ +||||+++++++.+. ..+|
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceEE
Confidence 8889999999999999999988 8999999999764322233346678899999999 899999999999988 8899
Q ss_pred EEEeecCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee-CCCCCCeEEEeeccc
Q 040003 206 VVMELCAGGELFDRIIQR-----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN-QQEEAPLKTIDFGLS 279 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~-~~~~~~~kl~DFGla 279 (489)
+||||+++ +|.+.+... ..+++..+..++.|++.||.|||+++|+||||||+|||+.. .+..+.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999975 676666432 26889999999999999999999999999999999999932 112788999999999
Q ss_pred cccCCCCcee-----eeeeccC----------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFR-----VWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~-----~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..+....... ...+..| . .+-++.+.++.+++.|...|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 8764322200 0111111 1 12234477888888888777643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=205.24 Aligned_cols=232 Identities=27% Similarity=0.320 Sum_probs=172.1
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 207 (489)
|.+.+.||+|++|.||+|.+..+++.|++|++...... ....+.+.+|+.+++++ +||||+++++.+.+. ..+++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEEE
Confidence 78889999999999999999999999999998654322 45667899999999999 799999999999988 899999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+++|.+++.....+++..+..++.+++.+|.|||+.|++|+||+|+||++ +.++.+||+|||.+........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEcccccEEecccccc
Confidence 9999999999999887789999999999999999999999999999999999999 6678899999999988765542
Q ss_pred e----eeeeeccC-------------CCCcchhHHHHHHHhcccccCCCCCCCCCC--CCCC-CcchhhhhhccHHHHHH
Q 040003 288 F----RVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPP-IGDRVIAESLSEEEIAG 347 (489)
Q Consensus 288 ~----~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~ 347 (489)
. .......| ..+-.+.+.++.+++.|..++......... .+.. .....+...++.+..+.
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDF 236 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHH
Confidence 1 11111111 112234477888888888877654310000 0000 00011122223322222
Q ss_pred HHHHHhhhcCCCCCCccHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+. +++..|++.|.+..|+.
T Consensus 237 i~---~~l~~~p~~Rp~~~~ll 255 (260)
T cd06606 237 LR---KCLRRDPKKRPTADELL 255 (260)
T ss_pred HH---HhCcCChhhCCCHHHHh
Confidence 22 45667777888877764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-25 Score=206.96 Aligned_cols=146 Identities=34% Similarity=0.593 Sum_probs=133.5
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|+||.||++.+..+++.+|+|++.+...........+.+|+.+++.+ +||||+++++.+......|+||||+.+++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 69999999999999988999999999876555555677889999999999 79999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 216 LFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 216 L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|.+++...+.+++..+..++.|++.|+.|||+.+++|+||||+||++ +.++.++|+|||++......
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccC
Confidence 99999887789999999999999999999999999999999999999 66778999999999876543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-25 Score=234.46 Aligned_cols=157 Identities=25% Similarity=0.410 Sum_probs=136.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc-----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK-----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
..-++.+.||+|+||.||.|....-.. .||+|.+++ ..+.++...|.+|..+|+.+ +|||||+++|++.+..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~--~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR--LSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSG 768 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc--cCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCC
Confidence 346678899999999999998764322 388888754 46678889999999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 203 AVHVVMELCAGGELFDRIIQR-------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..+|++|||+||+|..+|.+. ..+...+...++.+|+.|++||+++++|||||-..|+|| +....+||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEcc
Confidence 999999999999999999875 247889999999999999999999999999999999999 7779999999
Q ss_pred eccccccCCCCceee
Q 040003 276 FGLSMFFRPGLTFRV 290 (489)
Q Consensus 276 FGla~~~~~~~~~~~ 290 (489)
||+|+.+...+.++.
T Consensus 846 FGlArDiy~~~yyr~ 860 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRK 860 (1025)
T ss_pred cchhHhhhhchheec
Confidence 999996655554443
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=208.78 Aligned_cols=184 Identities=25% Similarity=0.352 Sum_probs=144.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 207 (489)
|++.++||+|+||.||+|.+..+++.||+|.+.+... .... ....+|+.++.++.+|+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6778899999999999999999999999999865422 2222 23457999999996699999999999987 899999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+. ++|.+.+... +.+++..+..++.|++.||+|||+.||+||||||+||++ +. +.+||+|||+++......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l---~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI---KD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---cC-CCeEEEecccccccccCC
Confidence 99996 5888887653 568999999999999999999999999999999999999 55 889999999998764332
Q ss_pred ceee------------eeeccC---CCCcchhHHHHHHHhcccccCCCC
Q 040003 287 TFRV------------WLRLHF---LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~~~~------------~~~~~y---pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... +....+ .-+-++.+.++.+++.|...|+..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~ 202 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT 202 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence 2211 111111 111234477888888887777653
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8e-25 Score=208.38 Aligned_cols=185 Identities=21% Similarity=0.375 Sum_probs=147.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||+|+||.||+|.++.++..+|+|.+...... ....+.+.+|+++++.+ +|+||+++++++......|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEE
Confidence 388899999999999999999999999999998764332 23446788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~DFGla~~~~~~ 285 (489)
||+.+++|.+++.... .+++..+..++.+++.||.|||+.+|+|+||||+||++ +.+ ..+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL---SKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---cCCCCeEEecccccchhccCC
Confidence 9999999999887643 47899999999999999999999999999999999999 444 35799999999876543
Q ss_pred Cceeeeeecc--C---------CC----CcchhHHHHHHHhcccccCC
Q 040003 286 LTFRVWLRLH--F---------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~~~~~~--y---------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
........+. | ++ +-.+.+.++.+++.|..++.
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 203 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE 203 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3221111111 1 11 11234667777877776664
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-27 Score=213.18 Aligned_cols=182 Identities=21% Similarity=0.316 Sum_probs=148.8
Q ss_pred ecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----eEEE
Q 040003 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-----AVHV 206 (489)
Q Consensus 132 ~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~~l 206 (489)
-.+.||-|+||+||.+++..+|+.||+|++..- ...-...+++.+|+.+|..+ +|.||...+++..-.. .+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHHHHH
Confidence 346799999999999999999999999987532 22334456788999999999 7999999988765432 4788
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
+.|+|. .+|...+.....++...+..++.||+.||+|||+.||+||||||.|+|+ +.+..+||||||+|+......
T Consensus 135 ~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccchhh
Confidence 999995 5888888888889999999999999999999999999999999999999 778999999999999887654
Q ss_pred ceee---------------eeeccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 287 TFRV---------------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~---------------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
...- +..++| -.+-++-++||.+++.+++-|-.
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 4322 444555 34445668999999888777753
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-25 Score=212.45 Aligned_cols=187 Identities=26% Similarity=0.378 Sum_probs=149.1
Q ss_pred eeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
|++.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|++++.++.+||||+++++++......|
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 788999999999999999864 46788999998754322 22334567899999999977999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+||||+.+|+|.+++...+.+++..+..++.|++.+|.|||+.|++||||||.||++ +.++.+||+|||+++.+...
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECccccccccc
Confidence 999999999999999877789999999999999999999999999999999999999 66788999999999876543
Q ss_pred Cceee---eeeccC---------------CCCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV---WLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~---~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... .....| .-+-.+.+.++.+++.|..++..
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 32111 011111 11122446777788888777653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=202.47 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=111.6
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHH-----------------------HHHHHHHHHHHHHhcCCC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED-----------------------VEDVRREIRIMHHLAGHP 189 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~-----------------------~~~~~~E~~~l~~l~~hp 189 (489)
...||+|+||.||+|.+. +|+.||+|+++......... .....+|+++|.+| .++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHC
Confidence 457999999999999987 89999999997643211110 12334599999999 577
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEeeeeCCCC
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC-HSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l-H~~~iiHrDlKp~Nill~~~~~~ 268 (489)
++.....+... ..+|||||++|+++.......+.++...+..++.|++.+|.++ |+.||+||||||+|||+. +
T Consensus 80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~ 153 (190)
T cd05147 80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----D 153 (190)
T ss_pred CCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----C
Confidence 76433332222 2389999999887766545567899999999999999999999 799999999999999993 3
Q ss_pred CCeEEEeeccccccCC
Q 040003 269 APLKTIDFGLSMFFRP 284 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~ 284 (489)
+.++|+|||+|.....
T Consensus 154 ~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 154 GKLYIIDVSQSVEHDH 169 (190)
T ss_pred CcEEEEEccccccCCC
Confidence 5799999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=209.87 Aligned_cols=185 Identities=22% Similarity=0.296 Sum_probs=147.9
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVHVV 207 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 207 (489)
|++.+.||+|+||.||+|.+..+++.+|+|.+.... ........+.+|+++++.+ +|+||+++++++.+. ...|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEE
Confidence 678889999999999999999999999999997653 2333446788999999999 799999999999888 899999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+.+ +|..++... ..+++..+..++.||+.||.|||+.|++|+||||+|||+ +.++.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCC
Confidence 999975 888887665 578999999999999999999999999999999999999 678889999999998775432
Q ss_pred c--eee-----------eeeccCC----CCcchhHHHHHHHhcccccCCCC
Q 040003 287 T--FRV-----------WLRLHFL----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 287 ~--~~~-----------~~~~~yp----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
. ... ++.+... -+-.+.+.++.+++.|...|...
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~ 205 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGS 205 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 100 1111111 11223467777888887776543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=213.68 Aligned_cols=151 Identities=26% Similarity=0.418 Sum_probs=128.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
.+.|++.++||+|+||.||+|.+..+++.||||.+...... ......+.+|+++++++ +||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhC-CCCCccceEEEEeccccccc
Confidence 34599999999999999999999999999999998653321 22224566899999999 8999999999886543
Q ss_pred ----eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 203 ----AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 203 ----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
..|+||||+.+ +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg 164 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFG 164 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCC
Confidence 45999999964 787777654 368999999999999999999999999999999999999 677889999999
Q ss_pred cccccC
Q 040003 278 LSMFFR 283 (489)
Q Consensus 278 la~~~~ 283 (489)
++..+.
T Consensus 165 ~~~~~~ 170 (310)
T cd07865 165 LARAFS 170 (310)
T ss_pred Cccccc
Confidence 998764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-24 Score=203.96 Aligned_cols=146 Identities=27% Similarity=0.445 Sum_probs=128.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+.||+|+||.||+|.+. .+..+|+|.+...... ...+.+|+++++.+ +||||+++++++......|+||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS----EEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC----HHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEE
Confidence 4888999999999999999875 4678999988654322 24678899999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||+.+++|.+++... +.+++..+..++.+++.++.|||+.||+||||||+||++ +.++.+||+|||+++...
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVL 151 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecc
Confidence 999999999988654 568899999999999999999999999999999999999 667789999999998654
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-25 Score=211.22 Aligned_cols=233 Identities=21% Similarity=0.251 Sum_probs=159.2
Q ss_pred eeccCCceEEEEEEEcCCC------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 135 KLGQGQFGTTFLCVEKATQ------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.||+|+||.||+|.+.... +.+|+|.+.... .......+.+|+.+++.+ +||||+++++++......|+||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEE
Confidence 5899999999999876543 689999886432 234456788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC--CCCCeEEEeeccc
Q 040003 209 ELCAGGELFDRIIQR-------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ--EEAPLKTIDFGLS 279 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~--~~~~~kl~DFGla 279 (489)
||+.+++|.+++... ..++...+..++.|++.||.|||+.+|+|+||||+|||+...+ ....+||+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999998642 2367788899999999999999999999999999999995432 2237999999999
Q ss_pred cccCCCCceee----eeeccC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhc
Q 040003 280 MFFRPGLTFRV----WLRLHF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESL 340 (489)
Q Consensus 280 ~~~~~~~~~~~----~~~~~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (489)
+.......... ..+..| .-+-++.+.++.+++. |..+|+...-.... .+............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENC 238 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccc
Confidence 86643322111 001111 1122344777888775 77666532110000 00000000011122
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
+. .+.. -+.+++..+++.|++++++...|.
T Consensus 239 ~~-~~~~--li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 239 PD-KIYQ--LMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred hH-HHHH--HHHHHcCCCcccCCCHHHHHHHHh
Confidence 22 2211 123567778888888888877664
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-25 Score=216.87 Aligned_cols=186 Identities=25% Similarity=0.332 Sum_probs=145.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|.+... ........+.+|+.+++.+ +||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccc
Confidence 345799999999999999999999999999999998542 2233456678899999999 799999999887543
Q ss_pred -CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 -VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
...|+||||+.+ +|..++ ..+.+++..+..++.|++.||.|||++||+||||||+|||+ +..+.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~~-~l~~~~-~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELMET-DLYKLI-KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhccc-CHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECccccee
Confidence 358999999964 887766 44579999999999999999999999999999999999999 677889999999998
Q ss_pred ccCCCCceee-----eeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 281 FFRPGLTFRV-----WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 281 ~~~~~~~~~~-----~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.......... +.+..| .+ +-++.+.++.+++.|...|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7643221110 111111 11 122447788888888877754
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-25 Score=210.05 Aligned_cols=141 Identities=21% Similarity=0.326 Sum_probs=118.4
Q ss_pred eeccCCceEEEEEEEcCC--CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecC
Q 040003 135 KLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~--~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 212 (489)
.||+|+||.||+|..... ...+++|.+... ......+.+.+|+.+++.+ +||||+++++++.+....|+|||||.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN--ASSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC--CChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCC
Confidence 599999999999975433 234566665432 2234567889999999999 89999999999999999999999999
Q ss_pred CCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 213 GGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 213 ~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|+|.+++... ...+...+..++.||+.||.|||+.+|+||||||+|||+ +.++.+||+|||++..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPS 148 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccc
Confidence 99999998753 235667778899999999999999999999999999999 6678899999999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=204.70 Aligned_cols=153 Identities=28% Similarity=0.540 Sum_probs=137.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+|++.+.||.|+||.||++.+..+++.||+|++..... .......+.+|+++++.+ +|||++++++.+......++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEE
Confidence 38889999999999999999999999999999875432 335567788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+++++|.+++... ..+++..+..++.+++.||.|||++|++|+||+|+||++ +.++.+||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeeccc
Confidence 999999999998764 678999999999999999999999999999999999999 6678899999999987755
Q ss_pred CC
Q 040003 285 GL 286 (489)
Q Consensus 285 ~~ 286 (489)
..
T Consensus 156 ~~ 157 (258)
T cd08215 156 TV 157 (258)
T ss_pred Cc
Confidence 43
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=213.14 Aligned_cols=148 Identities=19% Similarity=0.241 Sum_probs=123.1
Q ss_pred ceeccCCceEEEEEEEcCCCc-------EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 134 RKLGQGQFGTTFLCVEKATQK-------EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~-------~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+.||+|+||.||+|.+..++. .+|+|.+... .....+.+..|+.+++.+ +||||+++++++......++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEE
Confidence 369999999999998866543 3788877432 233456788899999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-----CCCeEEEeecccc
Q 040003 207 VMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-----EAPLKTIDFGLSM 280 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-----~~~~kl~DFGla~ 280 (489)
|||||.+|+|..++...+ .+++..+..++.||+.||.|||++||+||||||+|||+..++. ...+|++|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999987654 5889999999999999999999999999999999999954321 1237999999997
Q ss_pred ccCCC
Q 040003 281 FFRPG 285 (489)
Q Consensus 281 ~~~~~ 285 (489)
.....
T Consensus 157 ~~~~~ 161 (258)
T cd05078 157 TVLPK 161 (258)
T ss_pred ccCCc
Confidence 66543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=207.48 Aligned_cols=183 Identities=22% Similarity=0.306 Sum_probs=146.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|...+.||+|++|.||++.+..+++.+|+|.+... .....+.+.+|+.+++.+ +||||+++++++...+..|+|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEE
Confidence 355567899999999999999999999999988543 233446688999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+.+++|.+++.. +.++...+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.........
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCcc
Confidence 99999999998876 678999999999999999999999999999999999999 66788999999998765432211
Q ss_pred ee--eeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 289 RV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 289 ~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. +.+..| ++ +-.+.+.++.+++.|...|..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~ 217 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFN 217 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcC
Confidence 10 111111 11 123447788888888776643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=208.49 Aligned_cols=144 Identities=14% Similarity=0.147 Sum_probs=119.8
Q ss_pred eeccCCceEEEEEEEcCC------------------------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCC
Q 040003 135 KLGQGQFGTTFLCVEKAT------------------------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~------------------------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn 190 (489)
.||+|+||.||+|....+ ...||+|++... .......+.+|+.+++.+ +|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQV-SHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcC-CCCC
Confidence 699999999999975322 235888887542 223345688899999999 7999
Q ss_pred eeEEEEEEEeCCeEEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC----
Q 040003 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ---- 265 (489)
Q Consensus 191 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~---- 265 (489)
|+++++++.+....|+|||||++|+|..++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+...
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888865 4678999999999999999999999999999999999999532
Q ss_pred CCCCCeEEEeecccccc
Q 040003 266 QEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 266 ~~~~~~kl~DFGla~~~ 282 (489)
.....+||+|||++...
T Consensus 158 ~~~~~~kl~d~g~~~~~ 174 (274)
T cd05076 158 GTSPFIKLSDPGVSFTA 174 (274)
T ss_pred CccceeeecCCcccccc
Confidence 12335899999998654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=207.78 Aligned_cols=237 Identities=18% Similarity=0.264 Sum_probs=166.9
Q ss_pred eeecceeccCCceEEEEEEEcC-CCcEEEEEEeecccC-------CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-TQKEFACKSIAKRKL-------TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-~~~~~avK~i~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.+..+||||+++++++.+.
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 7888999999999999999887 788999998864321 23345567788999888644899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 202 VAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
+..|+||||++|++|.+++.. ...+++..++.++.|++.+|.|||+ .||+||||||+|||+ +.++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEecc
Confidence 999999999999999888743 3468999999999999999999996 789999999999999 66788999999
Q ss_pred ccccccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchhhhhhc
Q 040003 277 GLSMFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRVIAESL 340 (489)
Q Consensus 277 Gla~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 340 (489)
|++........... ..+..| ++. -.+.+.++.+++.|..+|......... .+ ............
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMY 238 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccC
Confidence 99987654432111 111111 111 123466778888887766432211000 00 000000000112
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l 372 (489)
+.+-.+.++ +++..|+++|.+..|+..++
T Consensus 239 ~~~l~~li~---~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 239 SEDVTDVIT---SCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred CHHHHHHHH---HHCCCCCccCCCHHHHHHHh
Confidence 222222222 56778888999998887765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-24 Score=209.80 Aligned_cols=187 Identities=24% Similarity=0.320 Sum_probs=148.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
...|...+.||+|+||.||+|++..++..+|+|.+.............+.+|+++++.+ +|+|++++++++......|+
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEE
Confidence 44588889999999999999999999999999998754444455567788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||+. |+|.+.+.. ...+++..+..++.+++.+|.|||+++|+||||||+|||+ +.++.+||+|||++......
T Consensus 93 v~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 93 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeecCc
Confidence 999996 578777654 3468999999999999999999999999999999999999 66788999999999876543
Q ss_pred Cceee--------ee----eccC--CCCcchhHHHHHHHhcccccCC
Q 040003 286 LTFRV--------WL----RLHF--LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~--------~~----~~~y--pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
..... ++ ...+ .-+-++.+.++.+++.|..++.
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 215 (308)
T cd06634 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (308)
T ss_pred ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCc
Confidence 22211 00 0111 1122344677777877776653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=205.61 Aligned_cols=184 Identities=23% Similarity=0.336 Sum_probs=148.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.++||+|+||.||++.+..+++.+|+|.+...... ......+.+|+++++.+ +|+||+++++++.+....|+|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEeh
Confidence 88899999999999999999999999999998764432 34556788999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 210 LCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 210 ~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|+++++|.+++.. ...+++..+..++.+++.||.|||+.|++||||||+||++ +.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~---~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL---VANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---ecCCcEEEeeccchhhhccC
Confidence 9999999998865 3468889999999999999999999999999999999999 55778999999999877554
Q ss_pred CceeeeeeccC---------CCC----cchhHHHHHHHhcccccCC
Q 040003 286 LTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~ 318 (489)
..........| ++. -++.+.++.+++.|..+|.
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 202 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 22111111111 111 1234667777777776654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-24 Score=210.11 Aligned_cols=188 Identities=26% Similarity=0.339 Sum_probs=147.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCeE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AVAV 204 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~ 204 (489)
+.+.|++.+.||+|+||.||+|.+..+++.||+|++.+.. ......+.+.+|+++++.+ +||||++++++|.. ....
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDI 85 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcE
Confidence 3466999999999999999999999999999999886532 2233446778999999999 79999999999865 5678
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+||||+ +++|..++. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +..+.+||+|||++.....
T Consensus 86 ~lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 86 YFVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCC
Confidence 9999999 568877664 4568888899999999999999999999999999999999 6678899999999986543
Q ss_pred CCceee---------eeec--cCCCC--cchhHHHHHHHhcccccCCCC
Q 040003 285 GLTFRV---------WLRL--HFLFF--QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 285 ~~~~~~---------~~~~--~ypf~--~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...... .+.. .|.+. -.+.+.++.+++.|...|+..
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 221100 1111 11111 123477888888888877643
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-25 Score=212.38 Aligned_cols=237 Identities=21% Similarity=0.213 Sum_probs=167.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|....+||+|+||.||++....+++.||+|.+... .......+.+|+.+++.+ +|+||+++++++...+..|+||
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVM 96 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEE
Confidence 355557899999999999999999999999988532 234456788999999999 7999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
||+++++|.+++. .+.+++..+..++.|++.+|.|||+.||+||||||+||++ +.++.++|+|||++.........
T Consensus 97 e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~~~ 172 (292)
T cd06657 97 EFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPR 172 (292)
T ss_pred ecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceeccccccc
Confidence 9999999988764 4578999999999999999999999999999999999999 66788999999998766433211
Q ss_pred eeee--eccC---------C----CCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchh--hhhhccHHHHHHHHH
Q 040003 289 RVWL--RLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRV--IAESLSEEEIAGLKE 350 (489)
Q Consensus 289 ~~~~--~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~l~~ 350 (489)
.... +..| . .+-++.+.++.+++.|..+|......... .+....... .....+.+....
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--- 249 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGF--- 249 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHH---
Confidence 1111 1111 1 12234467788888887766533211000 000000000 001122222222
Q ss_pred HHhhhcCCCCCCccHHHHHH--HHHHhC
Q 040003 351 MFKMIDTDNSGYITLEELKK--GLQRVG 376 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~--~l~~lg 376 (489)
+-++++.+++.+++..++.. ++...+
T Consensus 250 i~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 250 LDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 23567788888998888764 444444
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=205.63 Aligned_cols=144 Identities=27% Similarity=0.355 Sum_probs=121.3
Q ss_pred ceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-eCCeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-DAVAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~~~~~lv~e 209 (489)
+.||+|+||.||+|.+.. ....||+|.+... ......+.+.+|+.+++.+ +||||+++++++. .+...++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999998653 3457999987532 2345567888999999999 8999999999765 4566899999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+.+|+|.+++... .......+..++.|++.||.|||+.+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIY 149 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCcccccccc
Confidence 99999999998754 346777788899999999999999999999999999999 667889999999998654
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=209.24 Aligned_cols=184 Identities=24% Similarity=0.327 Sum_probs=146.5
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||.|++|.||+|.+..+|..||+|++..... .......+.+|+++++.+ +||||+++++++.+....|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEe
Confidence 5678899999999999999999999999999875432 222335678899999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+. ++|.+++.... .+++..+..++.|++.||.|||+++++||||+|+||++ +.++.+||+|||++..+.....
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCcEEEeecccccccCCCcc
Confidence 995 68999887665 68999999999999999999999999999999999999 5678899999999976532211
Q ss_pred e-e-e----------eeeccCCCC----cchhHHHHHHHhcccccCCC
Q 040003 288 F-R-V----------WLRLHFLFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~-~-~----------~~~~~ypf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
. . . ++.+.-++. ..+.+.++.+++.|...|..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 202 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPG 202 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 0 0 0 111111111 12347788888888877653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-25 Score=219.71 Aligned_cols=231 Identities=27% Similarity=0.365 Sum_probs=176.9
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+..+.+.|.+...+|.|+|+.|-.|.+..+++.+++|++.+... ...+|+.++....+||||+++.+.+.+..
T Consensus 317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~ 389 (612)
T KOG0603|consen 317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGK 389 (612)
T ss_pred cCCcchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCc
Confidence 34466779999999999999999999999999999999976521 23467878877779999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+.|+|||++.|+.|.+.+.....+. ..+..|+++|+.|+.|||++|||||||||+|||+. +..++++|+|||.++..
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhC
Confidence 9999999999999999887765555 78888999999999999999999999999999995 35778999999999988
Q ss_pred CCCCceeeeeecc-----------C----CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHH
Q 040003 283 RPGLTFRVWLRLH-----------F----LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 283 ~~~~~~~~~~~~~-----------y----pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (489)
... ..+.-++.. | .+| +.+.++++++.|.-.|-...-. ......+........++.+-.+-
T Consensus 467 ~~~-~~tp~~t~~y~APEvl~~~~yt~acD~W--SLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~~~~~s~~vS~~AKdL 542 (612)
T KOG0603|consen 467 ERS-CDTPALTLQYVAPEVLAIQEYTEACDWW--SLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQMPKFSECVSDEAKDL 542 (612)
T ss_pred chh-hcccchhhcccChhhhccCCCCcchhhH--HHHHHHHHHHhCCCccccCCch-HHHHHhhcCCccccccCHHHHHH
Confidence 765 111112222 2 444 4488999999998888654321 01111111121224556655555
Q ss_pred HHHHHhhhcCCCCCCccHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+. .++..|+..|+++.++..
T Consensus 543 l~---~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 543 LQ---QLLQVDPALRLGADEIGA 562 (612)
T ss_pred HH---HhccCChhhCcChhhhcc
Confidence 55 457788888999998753
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-24 Score=202.26 Aligned_cols=182 Identities=27% Similarity=0.370 Sum_probs=151.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||++.+..+++.+++|++..... .....+.+|+++++.+ +|+||+++++++......+++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEe
Confidence 7888999999999999999998999999999865432 3567889999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT- 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~- 287 (489)
|+.+++|.+++... ..+++..+..++.|++.+|.+||.+|++||||+|+||++ +.++.+||+|||++........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~ 154 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKAR 154 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE---ccCCeEEEeeccccccccccccc
Confidence 99999999988765 578999999999999999999999999999999999999 6678899999999988866541
Q ss_pred eeeeeeccC-------------CCCcchhHHHHHHHhcccccCC
Q 040003 288 FRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 288 ~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~ 318 (489)
........| ..+-.+.+.++..++.|..++.
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 198 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYS 198 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 111111111 1222345777888888876654
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=211.60 Aligned_cols=186 Identities=20% Similarity=0.346 Sum_probs=145.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV----- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 202 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+++++.+ +||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhhc
Confidence 569999999999999999999999999999999875432 122335677899999999 8999999999987654
Q ss_pred -----eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 -----AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 -----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.+|+||||+.+ +|...+... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~df 160 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLADF 160 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeCcc
Confidence 89999999976 676766543 468999999999999999999999999999999999999 67788999999
Q ss_pred ccccccCCCCc--ee-eeeeccC--------------CCCcchhHHHHHHHhcccccCCC
Q 040003 277 GLSMFFRPGLT--FR-VWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 277 Gla~~~~~~~~--~~-~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
|++..+..... +. ......| .-+-.+.+.++.+++.|...|..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 99987643321 00 0111111 11123446778888888776653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-24 Score=207.47 Aligned_cols=188 Identities=23% Similarity=0.318 Sum_probs=148.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|...++||+|+||+||+|.+..+++.||+|.+.............+.+|+++++.+ +|||++++++++.+....|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence 345577788999999999999999999999999999765444555567788999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+. |+|.+.+.. ...+++..+..++.|++.+|.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 98 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~~ 173 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSP 173 (313)
T ss_pred EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccCC
Confidence 9999996 577777755 3568999999999999999999999999999999999999 6677899999999875433
Q ss_pred CCceee--------ee----eccCC--CCcchhHHHHHHHhcccccCC
Q 040003 285 GLTFRV--------WL----RLHFL--FFQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 285 ~~~~~~--------~~----~~~yp--f~~~~~~~~~~~i~~~~~~~~ 318 (489)
...... ++ ...+. -+-++.+.++.+++.|..++.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~ 221 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 221 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 221110 11 01110 011244677888888877654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=212.91 Aligned_cols=186 Identities=27% Similarity=0.367 Sum_probs=150.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-----e
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-----A 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~ 203 (489)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+.+|+.+++.+ +|+||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence 3889999999999999999999999999999986532 2234556788999999999 7999999999988775 7
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+||||+. ++|.+++.....+++..+..++.+++.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeec
Confidence 999999997 5898888777789999999999999999999999999999999999999 667899999999999876
Q ss_pred CCCc----ee-eeeeccC----------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLT----FR-VWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~----~~-~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.... .. .+.+..| + -+-++.+.++.+++.|...|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 5431 11 1111111 1 11234467778888887777654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-24 Score=212.27 Aligned_cols=188 Identities=22% Similarity=0.326 Sum_probs=148.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCe
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVA 203 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~ 203 (489)
+.+.|++.+.||+|+||.||+|.+..+++.+|+|.+.+.. ........+.+|+.+++++.+||||+++++++.. ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 4567999999999999999999999899999999886432 2233445677899999999679999999999864 346
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+||||+. ++|..++... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++.+.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhccc
Confidence 899999997 5898877654 78888999999999999999999999999999999999 778899999999998765
Q ss_pred CCCce-------eeeeeccC--------------CCCcchhHHHHHHHhcccccCCC
Q 040003 284 PGLTF-------RVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 284 ~~~~~-------~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... ..+.+..| .-+-++.+.++.+++.|...|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~ 215 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPG 215 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCC
Confidence 43221 00111111 11123447788889988877754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=208.68 Aligned_cols=185 Identities=25% Similarity=0.379 Sum_probs=147.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||+||+|....+++.||||.+...... .......+|+..++++.+|+||+++++++.+....|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67888999999999999999989999999998654321 2223445799999999449999999999999999999999
Q ss_pred ecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|+ +|+|.+++.... .+++..+..++.|++.+|.|||++||+|+||||+||++ +..+.++|+|||++........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC
Confidence 99 789999887654 78999999999999999999999999999999999999 6788899999999987654322
Q ss_pred eee-----------eeecc--C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 288 FRV-----------WLRLH--F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~~-----------~~~~~--y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ++... + .-+-.+.+.++.+++.|...|+..
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 211 11111 1 112234577888888888777654
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=203.86 Aligned_cols=185 Identities=22% Similarity=0.330 Sum_probs=143.3
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCe----
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVA---- 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~---- 203 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++++. +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788899999999999999998899999999975432 2223345678888888773 59999999999988776
Q ss_pred -EEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 204 -VHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 204 -~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+++|||+.+ +|.+++.... .+++..+..++.|++.||.|||+.||+|+||||+||++ +.++.+||+|||++.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCcce
Confidence 9999999964 8888886643 58999999999999999999999999999999999999 667889999999998
Q ss_pred ccCCCCceee-eeeccC-------------CCCcchhHHHHHHHhcccccCCC
Q 040003 281 FFRPGLTFRV-WLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 281 ~~~~~~~~~~-~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+........ .....| .-+.++.+.++.+++.|...|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~ 208 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRG 208 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccC
Confidence 7643322111 001111 11223447777788777665543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-24 Score=210.76 Aligned_cols=142 Identities=15% Similarity=0.247 Sum_probs=124.9
Q ss_pred ceeccC--CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 134 RKLGQG--QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 134 ~~lG~G--~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
..||+| +||+||+|.+..+++.||+|++..... .....+.+.+|+.+++.+ +||||++++++|......|+||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecc
Confidence 356666 999999999999999999999875432 344567889999999999 8999999999999999999999999
Q ss_pred CCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 212 AGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 212 ~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+|++|||.+.
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill---~~~~~~~~~~~~~~~ 149 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI---SGDGLVSLSGLSHLY 149 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---eCCCcEEEechHHHh
Confidence 999999988764 348899999999999999999999999999999999999 567789999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.9e-24 Score=212.41 Aligned_cols=186 Identities=24% Similarity=0.345 Sum_probs=145.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.++|.+.+.||+|+||.||+|.+..+++.||+|++.+.. ......+.+.+|+.+++++ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccccc
Confidence 4467999999999999999999999999999999986532 2233446678899999999 899999999988643
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|++++++ +++|.+++. .+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg~~ 167 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA 167 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEeccccc
Confidence 3578899987 778887664 3468999999999999999999999999999999999999 66788999999999
Q ss_pred cccCCCCceeeeeeccC----------CC----CcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+......... ..+..| ++ +-++.+.++.+++.|...|+.
T Consensus 168 ~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 168 RHTDDEMTGY-VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cccccccccc-ccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8654322110 111111 11 112347788888888877754
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-24 Score=204.66 Aligned_cols=151 Identities=33% Similarity=0.481 Sum_probs=136.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|++...||+|+||.||+|.+..++..||+|++..... ..+.+.+|+++++.+ +|+||+++++++......|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEE
Confidence 44569999999999999999999998999999999865322 456788999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||+.+++|.+++.... .++...+..++.+++.||.|||+.||+|+||||+||++ +.++.+||+|||++.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhhcc
Confidence 9999999999999998776 89999999999999999999999999999999999999 6678899999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=187.82 Aligned_cols=141 Identities=40% Similarity=0.722 Sum_probs=130.2
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh-h---
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI-Q--- 415 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~-~--- 415 (489)
++.++...++++|+.+|.|++|+|+..||..+|+.+|..+++.++..++..+|.|++|.|+|+||+.++...... .
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 456788899999999999999999999999999999999999999999999999999999999999988754321 1
Q ss_pred -hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 -REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 -~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.+++||+.||+|++|+|+.+||+.+|..+| ++++++++|++.+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 345899999999999999999999999999999 68999999999999999999999999999974
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-24 Score=211.35 Aligned_cols=150 Identities=27% Similarity=0.379 Sum_probs=129.2
Q ss_pred eeecceeccCCceEEEEEEEcCC--CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----AVA 203 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~--~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~ 203 (489)
|++.+.||+|+||.||+|++..+ +..||+|.+.... ......+.+.+|+.+++++.+||||+++++++.. ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 88899999999999999999888 8999999986432 2223356778899999999679999999987533 246
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|++|||+. ++|.+.+.....+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceecc
Confidence 889999985 6899988877889999999999999999999999999999999999999 667889999999998765
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 157 ~ 157 (332)
T cd07857 157 E 157 (332)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=206.89 Aligned_cols=185 Identities=18% Similarity=0.199 Sum_probs=143.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|...+.||+|+||.||++.+..+++.||+|.+..... ......+.+|+.++.++.+|+||+++++++......|++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 46677899999999999999999999999999875432 2455678899999999955999999999999999999999
Q ss_pred eecCCCchHHH---HH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDR---II--QRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~---l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||+.. +|.++ +. ..+.+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhHHh
Confidence 99864 54443 22 235789999999999999999999974 99999999999999 66788999999999866
Q ss_pred CCCCceee-----------eeec----cC--CCCcchhHHHHHHHhcccccCCC
Q 040003 283 RPGLTFRV-----------WLRL----HF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 283 ~~~~~~~~-----------~~~~----~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
........ ++.. .| .-+-++.+.++.+++.|..+|..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 212 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK 212 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchh
Confidence 43221110 1111 11 01123447788888888887753
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-24 Score=202.33 Aligned_cols=146 Identities=13% Similarity=0.153 Sum_probs=120.1
Q ss_pred ceeccCCceEEEEEEEcCC------------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 134 RKLGQGQFGTTFLCVEKAT------------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~------------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
+.||+|+||.||+|..... ...+|+|.+... .......+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQV-SHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 3689999999999975322 235888876542 233445788899999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC----CCCCeEEEee
Q 040003 202 VAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ----EEAPLKTIDF 276 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~----~~~~~kl~DF 276 (489)
...++||||+.+|+|..++... +.+++..+..++.||+.||.|||++||+||||||+|||+.... ....+|++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999998887653 5689999999999999999999999999999999999995321 1123899999
Q ss_pred ccccccC
Q 040003 277 GLSMFFR 283 (489)
Q Consensus 277 Gla~~~~ 283 (489)
|++..+.
T Consensus 157 g~~~~~~ 163 (262)
T cd05077 157 GIPITVL 163 (262)
T ss_pred CCCcccc
Confidence 9997654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-24 Score=206.11 Aligned_cols=186 Identities=26% Similarity=0.390 Sum_probs=149.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|+||.||+|....+++.||+|++.... ......+.+.+|+.+++.+ +|+||+++++++.+....++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEec
Confidence 567788999999999999999999999999987643 2233346677899999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~ 288 (489)
|+. ++|.+++... ..+++..+..++.+++.||.|||++||+||||+|+||++ +.++.+||+|||++.........
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCccc
Confidence 997 5899998776 579999999999999999999999999999999999999 66788999999999876443211
Q ss_pred e-e-----------ee-ec-cC--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 289 R-V-----------WL-RL-HF--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 289 ~-~-----------~~-~~-~y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
. . ++ .. .+ .-+-.+.+.++.+++.|...|....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 203 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS 203 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 0 0 11 01 11 1122344677888888877776543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-24 Score=212.77 Aligned_cols=189 Identities=25% Similarity=0.380 Sum_probs=149.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe-
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA- 203 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~- 203 (489)
.+.+.|++.+.||+|+||.||+|++..+++.||+|++.... ........+.+|+.+++.+ +||||+++++++.....
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSL 89 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccc
Confidence 44567999999999999999999999999999999986532 2233456778899999999 89999999988866554
Q ss_pred -----EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 204 -----VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 204 -----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
.|+|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGL 164 (343)
T ss_pred cccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEccccc
Confidence 89999998 6799887754 579999999999999999999999999999999999999 6678899999999
Q ss_pred ccccCCCCceee---------eeec--cC--CCCcchhHHHHHHHhcccccCCCC
Q 040003 279 SMFFRPGLTFRV---------WLRL--HF--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 279 a~~~~~~~~~~~---------~~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+........... ++.. .+ ..+-++.+.++.+++.|...|+..
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 165 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred cccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 987643311100 1111 11 112234477888888888877654
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=193.63 Aligned_cols=145 Identities=17% Similarity=0.142 Sum_probs=114.4
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC---------------------H--HHHHHHHHHHHHHHHhcCCC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT---------------------E--EDVEDVRREIRIMHHLAGHP 189 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~---------------------~--~~~~~~~~E~~~l~~l~~hp 189 (489)
.+.||+|+||.||+|.+. +|+.||||+++...... . .....+.+|++.+.++ .|+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YEA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-HhC
Confidence 467999999999999987 89999999987642110 0 0022346899999999 788
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCC
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~ 268 (489)
+|.....+... ..||||||++|+++.........++...+..++.|++.++.++|+ .||+||||||+|||+ + +
T Consensus 80 ~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll---~-~ 153 (190)
T cd05145 80 GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY---H-D 153 (190)
T ss_pred CCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE---E-C
Confidence 87544443333 248999999988665444445678888999999999999999999 999999999999999 3 5
Q ss_pred CCeEEEeeccccccCCC
Q 040003 269 APLKTIDFGLSMFFRPG 285 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~ 285 (489)
+.++|+|||+|+.....
T Consensus 154 ~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 154 GKPYIIDVSQAVELDHP 170 (190)
T ss_pred CCEEEEEcccceecCCC
Confidence 77999999999887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-24 Score=210.62 Aligned_cols=149 Identities=30% Similarity=0.413 Sum_probs=127.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
..+|.+.+.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+++++.+ +||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhc-CCCcchhhHhhhcccccccc
Confidence 4569999999999999999999999999999999865432 3456788999999999 899999999776543
Q ss_pred ---------CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 202 ---------VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 202 ---------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
...|+||||+. ++|.+++. .+.+++..++.++.||+.||.|||++||+||||||+||++.. .++.+|
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~--~~~~~k 155 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVLK 155 (342)
T ss_pred cccccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC--CCceEE
Confidence 36899999996 58887764 457899999999999999999999999999999999999942 345789
Q ss_pred EEeeccccccC
Q 040003 273 TIDFGLSMFFR 283 (489)
Q Consensus 273 l~DFGla~~~~ 283 (489)
|+|||++....
T Consensus 156 l~dfg~~~~~~ 166 (342)
T cd07854 156 IGDFGLARIVD 166 (342)
T ss_pred ECCcccceecC
Confidence 99999997653
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=203.70 Aligned_cols=188 Identities=14% Similarity=0.125 Sum_probs=131.8
Q ss_pred cceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHH--------HHHHHHHHHHHHhcCCCCeeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDV--------EDVRREIRIMHHLAGHPNVIQIVG 196 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~--------~~~~~E~~~l~~l~~hpniv~~~~ 196 (489)
+.|++.++||+|+||+||+|.+..+ +..+|+|+............ .....+...+..+ +|+||+++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~ 90 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPKYYG 90 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCcEEE
Confidence 4699999999999999999998877 66777776433221110000 1112333444555 7999999998
Q ss_pred EEEeCC----eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 197 AYEDAV----AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 197 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
++.... ..+++||++. .++.+.+......++..+..++.|++.||.|||+++|+||||||+|||+ +.++.+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~~~~~ 166 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGNNRGY 166 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCcEE
Confidence 765543 4578888874 4666666555557888899999999999999999999999999999999 6678899
Q ss_pred EEeeccccccCCCCcee-------e--eeeccC---------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 273 TIDFGLSMFFRPGLTFR-------V--WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 273 l~DFGla~~~~~~~~~~-------~--~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+|||+|+.+....... . ..+..| . -+-++.+.++.+++.|..+|...
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999998764321100 0 111112 1 11234477888888888887643
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-26 Score=227.10 Aligned_cols=189 Identities=24% Similarity=0.430 Sum_probs=161.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.++.|+++..+|.|+||.||+|+++.+++..|+|+++.. ...+..-+..||-+++.+ +|||||.+++.|.....+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecC-CCcChHHHHhhhhhhcCc
Confidence 5677899999999999999999999999999999999654 345667788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||+||||.||+|.+...-.+.+++.++..+++..+.+++|||+.|-+|||||-+|||+ .+.+.+||+|||.+..+..
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill---td~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL---TDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee---cccCceeecccCchhhhhh
Confidence 9999999999999988778899999999999999999999999999999999999999 6678899999999988754
Q ss_pred CCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCC
Q 040003 285 GLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWP 323 (489)
Q Consensus 285 ~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~ 323 (489)
....+.-+ -+.|||...+-. ..=.+|-|.--.++|.
T Consensus 165 ti~Krksf-iGtpywmapEva--averkggynqlcdiwa 200 (829)
T KOG0576|consen 165 TIAKRKSF-IGTPYWMAPEVA--AVERKGGYNQLCDIWA 200 (829)
T ss_pred hhhhhhcc-cCCccccchhHH--HHHhcccccccccccc
Confidence 43332222 233888875433 3335677777788884
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=202.94 Aligned_cols=186 Identities=28% Similarity=0.412 Sum_probs=148.4
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|++.+.||+|++|.||+|.+..+++.+|+|.+..... .......+.+|+++++++ +|+||+++++++.+....|+|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEe
Confidence 5677899999999999999999999999999865432 223456788999999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc-
Q 040003 210 LCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT- 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~- 287 (489)
|+.+ +|.+.+... +.+++..+..++.+++.||.|||++||+|+||||+||++ +.++.+||+|||.+........
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCccc
Confidence 9975 888877664 578999999999999999999999999999999999999 6678899999999987755431
Q ss_pred eee-e----------eec--cC--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 288 FRV-W----------LRL--HF--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 288 ~~~-~----------~~~--~y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
... . +.+ .+ .-+-++.+.++.+++.|...|+...
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~ 203 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS 203 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 110 0 111 11 1112344778888888887776543
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-24 Score=222.49 Aligned_cols=148 Identities=24% Similarity=0.364 Sum_probs=107.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCC----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEE-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGA----- 197 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~----- 197 (489)
.+.|.+.++||+|+||.||+|++..+ +..||+|.+..... .+....| . +... .+.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e-~-l~~~-~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE-R-VRRA-CPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH-H-HHhh-chhhHHHHHHhhhccc
Confidence 45699999999999999999999988 89999998753211 1111111 1 1111 12233222221
Q ss_pred -EEeCCeEEEEEeecCCCchHHHHHHcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 040003 198 -YEDAVAVHVVMELCAGGELFDRIIQRGH--------------------YTERKAADLTRIIVGVVEACHSLGVMHRDLK 256 (489)
Q Consensus 198 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlK 256 (489)
......+||||||+.+++|.+++..... .....+..++.||+.||+|||++||||||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 2456789999999999999998864321 1123456789999999999999999999999
Q ss_pred CCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 257 PENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 257 p~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||+.. ..+.+||+|||+|+.+..
T Consensus 283 P~NILl~~--~~~~~KL~DFGlA~~l~~ 308 (566)
T PLN03225 283 PQNIIFSE--GSGSFKIIDLGAAADLRV 308 (566)
T ss_pred HHHEEEeC--CCCcEEEEeCCCcccccc
Confidence 99999932 356899999999986543
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-24 Score=208.57 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=174.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.....+||-|.||.||.|+++.-...||||.++. +.-.+++|+.|+.+|+.+ +|||+|+|+|.|.....+|||.|
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE----DtMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhh----cchhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeEEEEe
Confidence 3456789999999999999999889999999864 344678999999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 210 LCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||..|+|++||.+.. .++......++.||..|++||..+++|||||-..|+|+ .++..||++||||++++. +++
T Consensus 344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMt-gDT 419 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMT-GDT 419 (1157)
T ss_pred cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhc-CCc
Confidence 999999999997653 36666778888999999999999999999999999999 788899999999999875 444
Q ss_pred eeeeeeccCCCCcch-----------------hHHHHHHHh-cccccCCCCCCCCCCCCCCCcchhh-hhhccHHHHHHH
Q 040003 288 FRVWLRLHFLFFQKQ-----------------RQSVLQTRL-VRNLNEPGSLWPDKVAVPPIGDRVI-AESLSEEEIAGL 348 (489)
Q Consensus 288 ~~~~~~~~ypf~~~~-----------------~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 348 (489)
++......||..... .+.++-+|- .|.-++|+-.-.....+-...-++- +....+ ..-+|
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPp-kVYeL 498 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPP-KVYEL 498 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCH-HHHHH
Confidence 444322333321111 122333332 1222222211100000000001111 112222 22222
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhCCC--CCHHHHHHHHHcc
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRVGAN--LMDSEIDGLMQAG 391 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~lg~~--~~~~~i~~l~~~~ 391 (489)
+-.|+..++.-+.+..|+-.++..+... .+++--++|-+..
T Consensus 499 --MraCW~WsPsDRPsFaeiHqafEtmf~~sSisdEV~keLgk~~ 541 (1157)
T KOG4278|consen 499 --MRACWNWSPSDRPSFAEIHQAFETMFSSSSISDEVQKELGKNN 541 (1157)
T ss_pred --HHHHhcCCcccCccHHHHHHHHHHHhccccccHHHHHHHhhcc
Confidence 2257788999999999999999887533 3444334444443
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-24 Score=207.22 Aligned_cols=150 Identities=25% Similarity=0.346 Sum_probs=127.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
+.|++.++||+|+||.||+|.+..+++.+|+|.+....... .....+.+|+++++.+ +||||+++++++.+.
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhc-CCCCccchhhheecccccccc
Confidence 56999999999999999999999999999999986543222 1224567899999999 899999999987543
Q ss_pred --CeEEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
..+|+||||+.+ +|...+.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~ 161 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGL 161 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCcc
Confidence 357999999965 67666654 3579999999999999999999999999999999999999 6788899999999
Q ss_pred ccccC
Q 040003 279 SMFFR 283 (489)
Q Consensus 279 a~~~~ 283 (489)
++...
T Consensus 162 ~~~~~ 166 (311)
T cd07866 162 ARPYD 166 (311)
T ss_pred chhcc
Confidence 98654
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-23 Score=200.48 Aligned_cols=185 Identities=19% Similarity=0.217 Sum_probs=144.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||||.+.+.. .......+.+|+.++..+.+||||+++++++.+....|+|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 45899999999999999999999999999999987542 2234456677888787775699999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+. ++|.+++.. .+.+++..+..++.+++.|+.|||+ .||+||||||+||++ +.++.+||+|||++..+...
T Consensus 93 ~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 93 MELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhccCC
Confidence 99985 467666544 3568899999999999999999997 699999999999999 66788999999999876432
Q ss_pred Cceee-eeeccC-------------CC----CcchhHHHHHHHhcccccCC
Q 040003 286 LTFRV-WLRLHF-------------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~-~~~~~y-------------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
..... .....| ++ +-.+.+.++.+++.|..+|.
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 219 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK 219 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCC
Confidence 22111 000011 01 11244778888888887764
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=201.40 Aligned_cols=152 Identities=24% Similarity=0.423 Sum_probs=128.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+.+|+.+++.+ +||||+++++++.+....|+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence 488999999999999999999888777777776543221 122334567899999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||+.+++|.+++.. ...+++..+..++.|++.||.|||++||+|+||||+||++. ++.+||+|||++..+
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 9999999999888753 34689999999999999999999999999999999999993 245999999999876
Q ss_pred CCC
Q 040003 283 RPG 285 (489)
Q Consensus 283 ~~~ 285 (489)
...
T Consensus 156 ~~~ 158 (260)
T cd08222 156 MGS 158 (260)
T ss_pred CCC
Confidence 543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-23 Score=202.40 Aligned_cols=146 Identities=22% Similarity=0.267 Sum_probs=123.7
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
.+++.+|.| |.||+++...+++.||+|++.... ........+.+|+++++.+ +|+||+++++++.+....|++|||
T Consensus 5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred hhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEec
Confidence 344444444 556666667799999999997642 2345667899999999999 799999999999999999999999
Q ss_pred cCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 211 CAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 211 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||.+..+.
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~~~~~~kl~d~~~~~~~~ 152 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---SGDGKVVLSGLRYSVSMI 152 (314)
T ss_pred cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---ecCCceEEecCccceeec
Confidence 9999999988753 458899999999999999999999999999999999999 567889999999987553
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-24 Score=212.18 Aligned_cols=156 Identities=27% Similarity=0.365 Sum_probs=136.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+...+.++||+|.||+|++|.+...+ -.||||+++...... ....|++|+.+|.+| +|||+|+|||...+ ..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhc-cCcceeEEeeeecc-chh
Confidence 34567789999999999999887533 358999997665432 678899999999999 89999999999988 678
Q ss_pred EEEEeecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 205 HVVMELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|||++++|+|.+.|.+ +..|.......++.||+.|+.||.++++|||||-..|+||. ....||||||||.+-+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRAL 262 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceecc
Confidence 999999999999999987 35688889999999999999999999999999999999994 4567999999999999
Q ss_pred CCCCceee
Q 040003 283 RPGLTFRV 290 (489)
Q Consensus 283 ~~~~~~~~ 290 (489)
..++.+++
T Consensus 263 g~ned~Yv 270 (1039)
T KOG0199|consen 263 GENEDMYV 270 (1039)
T ss_pred CCCCcceE
Confidence 98888775
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-23 Score=196.31 Aligned_cols=167 Identities=19% Similarity=0.178 Sum_probs=131.7
Q ss_pred CCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCchHH
Q 040003 139 GQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFD 218 (489)
Q Consensus 139 G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~ 218 (489)
|.||.||+|++..+++.||+|.+.+.. ...+|...+... .||||+++++++.+....|+||||+.||+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 889999999999999999999986532 122344445555 69999999999999999999999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--------
Q 040003 219 RIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-------- 290 (489)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-------- 290 (489)
++.....+++..+..++.|++.||.|||++||+||||||+||++ +.++.++|+|||++...........
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aP 151 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAP 151 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccccccCCcCccccCC
Confidence 99887789999999999999999999999999999999999999 6678899999998866543211100
Q ss_pred -ee-eccC--CCCcchhHHHHHHHhcccccC
Q 040003 291 -WL-RLHF--LFFQKQRQSVLQTRLVRNLNE 317 (489)
Q Consensus 291 -~~-~~~y--pf~~~~~~~~~~~i~~~~~~~ 317 (489)
.. ...+ .-+-++.+.++.+++.|...+
T Consensus 152 E~~~~~~~~~~~DvwslG~il~el~~g~~~~ 182 (237)
T cd05576 152 EVGGISEETEACDWWSLGAILFELLTGKTLV 182 (237)
T ss_pred cccCCCCCCchhhHHHHHHHHHHHHHCcchh
Confidence 01 0111 112234477888888887544
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=205.01 Aligned_cols=238 Identities=24% Similarity=0.338 Sum_probs=166.6
Q ss_pred cceeecceeccCCceEEEEEEEcCC----CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT----QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+..++.++||+|-||.||+|..... .-.||||.-+.. .+.+..+.|+.|..+|+.+ +|||||+++|.+.+. .
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d--~t~d~tekflqEa~iMrnf-dHphIikLIGv~~e~-P 464 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD--CTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVEQ-P 464 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC--CChhhHHHHHHHHHHHHhC-CCcchhheeeeeecc-c
Confidence 3456678899999999999987543 335888876543 3455688999999999999 899999999999865 7
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|||||+++-|.|..+|..+ ..++......++.||+.||.|||+.+.|||||-..|||+. ...-|||+||||++.+
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSRYL 541 (974)
T ss_pred eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhhhc
Confidence 89999999999999999765 4688888999999999999999999999999999999994 4455999999999998
Q ss_pred CCCCceee--------eeecc---C-CCCcch----hH-HHHHHHhcccccCCCCCCCCCCCCCCCcchhh-hhhccHHH
Q 040003 283 RPGLTFRV--------WLRLH---F-LFFQKQ----RQ-SVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVI-AESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~--------~~~~~---y-pf~~~~----~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 344 (489)
.+...+.. |+... | =|...+ .+ |+.+.+..|.-+|-+--..+....-..+.+.- +.+..+ .
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp-~ 620 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPP-A 620 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCCh-H
Confidence 77665543 22111 1 111111 12 33333334544444322222111111111211 112222 2
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+--| .-++++-++..+....|++..|..+
T Consensus 621 LYsl--mskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 621 LYSL--MSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred HHHH--HHHHhccCcccCCcHHHHHHHHHHH
Confidence 2112 2367888999999999999887665
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=184.47 Aligned_cols=154 Identities=27% Similarity=0.352 Sum_probs=134.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|.++++||.|+||.+|+|....+|+.||||+-+... ....+..|..+.+.|.+...|..+..++.+..+-.+|
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 45999999999999999999999999999999865432 1245778999999997778999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|+++ |.+|.+++.- ...++...+..++-|++.-++|+|.++.|||||||+|+|++-......+.|+|||||+.+.+..
T Consensus 90 MdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred eecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 9998 8899998753 4579999999999999999999999999999999999999765566789999999999987644
Q ss_pred c
Q 040003 287 T 287 (489)
Q Consensus 287 ~ 287 (489)
+
T Consensus 169 t 169 (341)
T KOG1163|consen 169 T 169 (341)
T ss_pred c
Confidence 3
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-23 Score=204.90 Aligned_cols=186 Identities=25% Similarity=0.357 Sum_probs=143.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
...|.+.+.||+|+||.||+|++..+++.||+|++.+.. ........+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF-QSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc-ccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCC
Confidence 456999999999999999999999999999999986532 2223345678999999999 899999999998654
Q ss_pred -CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 -VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..+|+||||+.+ +|..++ ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg~~~ 165 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGLAR 165 (342)
T ss_pred CceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCCCCc
Confidence 356999999964 676554 3468999999999999999999999999999999999999 667889999999998
Q ss_pred ccCCCCceee---------eeec--cCC--CCcchhHHHHHHHhcccccCCCC
Q 040003 281 FFRPGLTFRV---------WLRL--HFL--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 281 ~~~~~~~~~~---------~~~~--~yp--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.......... ++.. .|. -+-.+.+.++.+++.|+..|...
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 166 HADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred CCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543221100 1111 111 11134477888888888877643
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-24 Score=194.08 Aligned_cols=154 Identities=25% Similarity=0.445 Sum_probs=133.1
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEE-EEEeCCe
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVG-AYEDAVA 203 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~ 203 (489)
.+.+.|.+.+.||+|.||.+-+|+++.+...+++|.+.+.. .....|.+|...--.|+.|.||+.-|+ .|+..+.
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 45577999999999999999999999999999999986532 345788899988778878999998876 5788888
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+.++|||++-|+|..-+.. ..+.|.....++.|++.|++|+|++++||||||.+|||+-+.+ ..+|||||||+.+...
T Consensus 97 YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKVG 174 (378)
T ss_pred EEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeecccccccC
Confidence 9999999999999876644 3577888899999999999999999999999999999998755 4489999999998664
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 175 ~ 175 (378)
T KOG1345|consen 175 T 175 (378)
T ss_pred c
Confidence 3
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=206.72 Aligned_cols=154 Identities=21% Similarity=0.331 Sum_probs=116.2
Q ss_pred ccceeecceeccCCceEEEEEEEc----------------CCCcEEEEEEeecccCCCHH-----------HHHHHHHHH
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK----------------ATQKEFACKSIAKRKLTTEE-----------DVEDVRREI 179 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~----------------~~~~~~avK~i~~~~~~~~~-----------~~~~~~~E~ 179 (489)
.+.|++.++||+|+||+||+|... ..++.||||.+......... ..+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 457999999999999999999752 24567999998643211100 112234577
Q ss_pred HHHHHhcCCCC-----eeEEEEEEEe--------CCeEEEEEeecCCCchHHHHHHcC----------------------
Q 040003 180 RIMHHLAGHPN-----VIQIVGAYED--------AVAVHVVMELCAGGELFDRIIQRG---------------------- 224 (489)
Q Consensus 180 ~~l~~l~~hpn-----iv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~---------------------- 224 (489)
.++.++ +|.+ +++++++|.. .+..||||||+.+++|.+++....
T Consensus 224 ~~l~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHh-hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 788888 4544 3677777643 356899999999999999886421
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 225 --HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 225 --~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
.++...+..++.|++.+|.|||+.+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~ 361 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCT 361 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCcccccc
Confidence 12445678899999999999999999999999999999 6678899999999976543
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-24 Score=207.11 Aligned_cols=190 Identities=20% Similarity=0.249 Sum_probs=158.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC-----CCCeeEEEEEEEe
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG-----HPNVIQIVGAYED 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-----hpniv~~~~~~~~ 200 (489)
+..+|.+....|+|-||+|.+|.+...|..||||+|... +-....=++|++||++|.. --|+++|+..|..
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 345699999999999999999999999999999999754 2333455689999999942 2489999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
.+++|||+|-+ ..+|.+.|++.|. +....++.+.+|++.||..|-..||+|.||||+|||++ .....+||||||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfG 582 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFG 582 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCc
Confidence 99999999988 5699999988764 66778899999999999999999999999999999994 346779999999
Q ss_pred cccccCCCCceee-----------eeecc--CCCCcchhHHHHHHHhcccccCCCCCC
Q 040003 278 LSMFFRPGLTFRV-----------WLRLH--FLFFQKQRQSVLQTRLVRNLNEPGSLW 322 (489)
Q Consensus 278 la~~~~~~~~~~~-----------~~~~~--ypf~~~~~~~~~~~i~~~~~~~~~~~~ 322 (489)
.|.+.......-. +|... ||...|+.+|.++++..|++-||+...
T Consensus 583 SA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 583 SASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred cccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 9998876554322 44333 477888899999999999999998654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=185.81 Aligned_cols=141 Identities=18% Similarity=0.211 Sum_probs=108.8
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc----CCCCeeEEEEEEEeCC---e-E
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA----GHPNVIQIVGAYEDAV---A-V 204 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~~~~~~~~---~-~ 204 (489)
.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.|. +||||++++++++++. . +
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 45799999999995 6766655 6998865322 23467899999999994 3799999999998873 4 3
Q ss_pred EEEEee--cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeecccc
Q 040003 205 HVVMEL--CAGGELFDRIIQRGHYTERKAADLTRIIVGVV-EACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSM 280 (489)
Q Consensus 205 ~lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l-~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla~ 280 (489)
.+|||| +.+|+|.+++.+ +.+++. ..++.+++.++ +|||+++||||||||+|||+...+ ....++|+||+.++
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 478999 557999999965 456655 35677777776 999999999999999999996432 34579999955454
Q ss_pred cc
Q 040003 281 FF 282 (489)
Q Consensus 281 ~~ 282 (489)
.+
T Consensus 158 ~~ 159 (210)
T PRK10345 158 TF 159 (210)
T ss_pred ce
Confidence 43
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=193.45 Aligned_cols=136 Identities=24% Similarity=0.415 Sum_probs=117.4
Q ss_pred Ccc-cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-------CCeeEEEE
Q 040003 125 NLK-EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-------PNVIQIVG 196 (489)
Q Consensus 125 ~~~-~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-------pniv~~~~ 196 (489)
.|. .+|.+.++||.|.|++||+|++..+.+.||+|+++.. ....+....||.+|+++..+ .+||+|++
T Consensus 74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD 149 (590)
T KOG1290|consen 74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLD 149 (590)
T ss_pred cccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeec
Confidence 344 6899999999999999999999999999999998643 45567788999999998533 36999999
Q ss_pred EEEe----CCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeC
Q 040003 197 AYED----AVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQ 265 (489)
Q Consensus 197 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~ 265 (489)
.|.. +.++|+|+|++ |-+|+.+|... ..++...++.|++||+.||.|||. .||||-||||+||||...
T Consensus 150 ~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 150 HFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred cceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 9965 56899999998 67898888764 458999999999999999999995 699999999999999643
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=164.41 Aligned_cols=144 Identities=31% Similarity=0.567 Sum_probs=133.9
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH-hhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH-LNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~-~~~~~~ 416 (489)
..++.++...++..|..||.+++|+|+.+||+-+++.+|..+...++.+++..+|.++.|.|+|++|+..|.. +....+
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt 104 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDT 104 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCc
Confidence 3577888899999999999999999999999999999999999999999999999999999999999998754 334457
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+++..+|+.+|.|++|.|+..+|+.+.+.+| ++++++.+||+++|.|+||.|+-+||..+|++.
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhcC
Confidence 78899999999999999999999999999999 899999999999999999999999999999753
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.5e-23 Score=197.11 Aligned_cols=155 Identities=22% Similarity=0.329 Sum_probs=131.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEEeCC----eE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL-AGHPNVIQIVGAYEDAV----AV 204 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~~----~~ 204 (489)
..+..+||+|.||.||+|... ++.||||++. .++.+.+.+|-+|.+.. ..|+||++++++-.... .+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~--~~~VAVKifp------~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD--NRLVAVKIFP------EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhcc--CceeEEEecC------HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 566788999999999999764 5899999984 45667888998888764 26999999999876655 89
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL---------GVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---------~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
|||+||-+.|+|.++|..+ .++......++.-+..||.|||+- .|+|||||..|||+ ..+++.-|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeec
Confidence 9999999999999999764 788999999999999999999963 59999999999999 7788999999
Q ss_pred eccccccCCCCcee----eeeeccC
Q 040003 276 FGLSMFFRPGLTFR----VWLRLHF 296 (489)
Q Consensus 276 FGla~~~~~~~~~~----~~~~~~y 296 (489)
||||..+.++.... .+++.+|
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RY 384 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRY 384 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhh
Confidence 99999998665433 3666665
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=186.27 Aligned_cols=154 Identities=25% Similarity=0.400 Sum_probs=134.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+.+.|...-+++.||||.-..+. +.-++..|.+..+.|.+.++|..+|.+...+.+-.|||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 3999999999999999999999999999999765432 22467789999999988999999999889999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~~~~ 285 (489)
|++ |.+|.|++.-. .+|+...+..++.|++.-++|+|++.+|.|||||+|+||+.. .....|.|+|||+|+.+.+.
T Consensus 104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 998 78999987644 479999999999999999999999999999999999999532 23456999999999999877
Q ss_pred Cce
Q 040003 286 LTF 288 (489)
Q Consensus 286 ~~~ 288 (489)
.+.
T Consensus 183 ~Tk 185 (449)
T KOG1165|consen 183 KTK 185 (449)
T ss_pred ccc
Confidence 653
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=204.64 Aligned_cols=184 Identities=20% Similarity=0.273 Sum_probs=149.9
Q ss_pred eeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
.+..++||+|+||+||+|.+...|+ .||+|++.... ..+....++.|+-+|.+| +|||+++|++++.... +.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HH
Confidence 3446789999999999998866554 57888876543 334457889999999999 8999999999998765 88
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||++||++|+|.++++.+ +.+.......|..||++|+.|||.+++|||||-..|||+ ..-..+||.|||+|+...+
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCc
Confidence 999999999999999764 578889999999999999999999999999999999999 5667799999999999887
Q ss_pred CCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 285 GLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 285 ~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
...-...-.+.||.. -..++.|..+.+...++.|..
T Consensus 851 d~~ey~~~~gK~pik----wmale~i~~~~~thqSDVWsf 886 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIK----WMALESIRIRKYTHQSDVWSF 886 (1177)
T ss_pred ccccccccccccCcH----HHHHHHhhccCCCchhhhhhh
Confidence 665444444445431 234566777778888888854
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-21 Score=216.97 Aligned_cols=232 Identities=15% Similarity=0.139 Sum_probs=160.0
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|...+.||+|+||.||+|++..++..||+|.+..... ....|+++|+++ +|||||++++++.+....|+||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEEE
Confidence 35566789999999999999999999999999864321 113468899999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||++|+|.+++. .+++.....++.+++.|++||| +.+|+||||||+||++ +.+...++. ||.+......
T Consensus 763 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~~~~~ 835 (968)
T PLN00113 763 EYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGLLCTD 835 (968)
T ss_pred eCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccccccC
Confidence 9999999999885 3788889999999999999999 6699999999999999 555556665 6665443221
Q ss_pred Ccee---e------eeeccC--CCCcchhHHHHHHHhcccccCCCCCCCCCC------------CCCCCcchhhhh--hc
Q 040003 286 LTFR---V------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV------------AVPPIGDRVIAE--SL 340 (489)
Q Consensus 286 ~~~~---~------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~--~~ 340 (489)
.... . +....| --+-++.+.++.+++.|+.++....-.... .........+.. ..
T Consensus 836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (968)
T PLN00113 836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV 915 (968)
T ss_pred CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence 1110 0 111112 112235588999999998877432100000 000000111100 11
Q ss_pred cHHHHHH-HHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 341 SEEEIAG-LKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 341 ~~~~~~~-l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..++..+ +.-+-+++..|++.|.++.|+.+.|.++
T Consensus 916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 916 NQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 2222222 2334467888889999999988887765
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-21 Score=177.19 Aligned_cols=150 Identities=42% Similarity=0.746 Sum_probs=134.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|.+.+.||+|++|.||+|.+..+++.+|+|.+...... ...+.+.+|++.++++ +|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEe
Confidence 56778999999999999999988999999998754322 2567889999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 210 LCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|+.+++|.+++..... +++..+..++.+++.++.+||..+++|+||+|.||++ +..+.++|+|||++..+...
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v---~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL---GMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeCceeeEecCc
Confidence 9999999999877666 8999999999999999999999999999999999999 55688999999999988654
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=178.30 Aligned_cols=143 Identities=18% Similarity=0.147 Sum_probs=116.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHH------HHHHHHHHHHhcCCCCeeEEEEEEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED------VRREIRIMHHLAGHPNVIQIVGAYE 199 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~------~~~E~~~l~~l~~hpniv~~~~~~~ 199 (489)
+..+|++.+.||.|+||.||++.. ++..+|+|++.......+...+. +.+|++.+.+| .|++|..+.+++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~ 105 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYL 105 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeee
Confidence 346799999999999999999654 46689999997655444444444 57999999999 8999999998876
Q ss_pred eC--------CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 200 DA--------VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 200 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
.. +..+|||||++|.+|.+.. .+++ ....+++.++..||..||+|||+||+||++ +.++ +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili---~~~g-i 173 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV---SKNG-L 173 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE---eCCC-E
Confidence 43 3589999999999997763 2333 346689999999999999999999999999 4455 9
Q ss_pred EEEeeccccccC
Q 040003 272 KTIDFGLSMFFR 283 (489)
Q Consensus 272 kl~DFGla~~~~ 283 (489)
+|+|||..+...
T Consensus 174 ~liDfg~~~~~~ 185 (232)
T PRK10359 174 RIIDLSGKRCTA 185 (232)
T ss_pred EEEECCCccccc
Confidence 999999887663
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-21 Score=183.25 Aligned_cols=147 Identities=22% Similarity=0.341 Sum_probs=124.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEEeC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL-AGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~---- 201 (489)
.....+.+.||+|.||.||+|.++ |+.||||++... +-..+.||.+|.+.. -+|+||..+++.-..+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 345788999999999999999885 779999998643 225677888888764 3899999999875433
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL--------GVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
.++|||.+|-+.|+|+|+|.+ ..++......++..++.||.+||.. .|.|||||..|||+ ..++..-|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C~I 357 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCI 357 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcEEE
Confidence 368999999999999999976 5789999999999999999999953 49999999999999 77889999
Q ss_pred EeeccccccCCC
Q 040003 274 IDFGLSMFFRPG 285 (489)
Q Consensus 274 ~DFGla~~~~~~ 285 (489)
+|+|||......
T Consensus 358 ADLGLAv~h~~~ 369 (513)
T KOG2052|consen 358 ADLGLAVRHDSD 369 (513)
T ss_pred eeceeeEEeccc
Confidence 999999887654
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-22 Score=185.14 Aligned_cols=185 Identities=20% Similarity=0.344 Sum_probs=148.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA------ 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 201 (489)
.+|.-++.+|.|.- .|..|.+.-+++.||+|.+... ........+..+|..++..+ .|+||++++.+|.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHHH
Confidence 35777888999988 7778888889999999998765 33344556778999999999 899999999998533
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..+|+|||||. .+|...+. -.++...+..++.|++.|++|||+.||+||||||+||++ ..++.+||.|||+|+.
T Consensus 94 ~e~y~v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhhcc
Confidence 46899999995 47877765 347778899999999999999999999999999999999 7788999999999987
Q ss_pred cCCCCceee------------eeeccC--CCCcchhHHHHHHHhcccccCCCCC
Q 040003 282 FRPGLTFRV------------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 282 ~~~~~~~~~------------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
-...-..+. ++..+| --..++.+|++.+++.|.+-|++..
T Consensus 168 e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d 221 (369)
T KOG0665|consen 168 EDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD 221 (369)
T ss_pred cCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch
Confidence 655422111 233334 2333566999999999999999753
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=183.48 Aligned_cols=148 Identities=19% Similarity=0.169 Sum_probs=115.2
Q ss_pred ceeecceeccCCceEEEEEE-EcCCCcEEEEEEeecccCCC-------------------HH--HHHHHHHHHHHHHHhc
Q 040003 129 MYSLGRKLGQGQFGTTFLCV-EKATQKEFACKSIAKRKLTT-------------------EE--DVEDVRREIRIMHHLA 186 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~-~~~~~~~~avK~i~~~~~~~-------------------~~--~~~~~~~E~~~l~~l~ 186 (489)
.|.+.+.||+|+||.||+|+ +..+|+.||+|++....... .. ....+.+|++++.++
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L- 107 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL- 107 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 38889999999999999998 67789999999987543110 00 113467899999999
Q ss_pred CC--CCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEeee
Q 040003 187 GH--PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG-VMHRDLKPENFLFI 263 (489)
Q Consensus 187 ~h--pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-iiHrDlKp~Nill~ 263 (489)
.+ ..+.+++++ ...|+||||+.|++|.........+....+..++.|++.++.+||..| |+||||||+|||+
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli- 182 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV- 182 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE-
Confidence 44 234455543 235899999999888765544455666677899999999999999999 9999999999999
Q ss_pred eCCCCCCeEEEeeccccccCCC
Q 040003 264 NQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 264 ~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+ .+.++|+|||+|......
T Consensus 183 --~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 183 --H-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred --E-CCCEEEEEChhhhccCCc
Confidence 4 567999999999866543
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=171.95 Aligned_cols=137 Identities=23% Similarity=0.309 Sum_probs=105.8
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.+...|++|+||+||++.. .+..++.+.+........ -....+.+|+++|++|.+|++|++++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3456899999999997754 566777666654332111 1123578999999999767899999886 45699999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL-KPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDl-Kp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+.|.+|...+.. . ...++.|++.+|++||++||||||| ||+|||+ +.++.++|+|||+|....
T Consensus 79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---QEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---cCCCCEEEEECCCceecC
Confidence 9999988654321 1 2357789999999999999999999 7999999 567789999999997543
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=200.83 Aligned_cols=149 Identities=32% Similarity=0.430 Sum_probs=122.5
Q ss_pred eeecceeccCCceE-EEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGT-TFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~-Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
|.-.+.+|.|+-|+ ||+|.. .|+.||||.+.. +......+||.+|+.-..|||||++|+.-.+....||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44456799998886 799876 578999998743 334567899999999888999999999999999999999
Q ss_pred eecCCCchHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGH----YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~ 282 (489)
|+|.. +|.+++...+. ......+.++.|++.||.+||+.+||||||||.||||... +...+++|+|||+++.+
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 99965 99999876311 1114457889999999999999999999999999999754 34467999999999998
Q ss_pred CCCCc
Q 040003 283 RPGLT 287 (489)
Q Consensus 283 ~~~~~ 287 (489)
..+..
T Consensus 662 ~~~~s 666 (903)
T KOG1027|consen 662 AGGKS 666 (903)
T ss_pred CCCcc
Confidence 76554
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-22 Score=190.53 Aligned_cols=146 Identities=22% Similarity=0.413 Sum_probs=128.7
Q ss_pred cccceeecceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.+.|.++++||+|+|++||++.+.. ..+.||+|.+.... ...++.+|+++|..+.++.||+.+.+++..++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34569999999999999999998877 78899999986432 23678999999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+..+||||+++-+..+++. .++...++.+++.++.||.++|.+|||||||||+|+|++.. .+.-.|+|||||..
T Consensus 109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~--t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR--TQRGVLVDFGLAQR 182 (418)
T ss_pred eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc--cCCceEEechhHHH
Confidence 9999999999988877764 46788999999999999999999999999999999999654 44568899999984
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=170.78 Aligned_cols=145 Identities=39% Similarity=0.654 Sum_probs=128.4
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCc
Q 040003 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 136 lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 215 (489)
||+|++|.||++....+++.+++|++....... ..+.+.+|+++++.+ .|++|+++++++......+++|||+.|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999987543221 356789999999999 79999999999999999999999999999
Q ss_pred hHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeeccccccCCCC
Q 040003 216 LFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 216 L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFGla~~~~~~~ 286 (489)
|.+++... ..++...+..++.+++.++.+||+.|++|+||+|.||++ +. .+.++|+|||.+.......
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~---~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL---DSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE---eCCCCcEEEecCCceEEccCCc
Confidence 99988765 468999999999999999999999999999999999999 44 6789999999998776543
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-20 Score=172.28 Aligned_cols=140 Identities=41% Similarity=0.710 Sum_probs=125.2
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCchHHH
Q 040003 140 QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDR 219 (489)
Q Consensus 140 ~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 219 (489)
+||.||+|.+..+++.+|+|++........ ...+.+|+++++++ +|+||+++++++......+++|||+.+++|..+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999998899999999875433221 57889999999999 899999999999999999999999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 220 IIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 220 l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+.....++...+..++.+++.++.+||..+|+|+||+|.||++ +.++.++|+|||++......
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~~~~~l~d~~~~~~~~~~ 140 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DEDGHVKLADFGLARQLDPG 140 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCCCcEEEccccceeeeccc
Confidence 8776668999999999999999999999999999999999999 55688999999999887654
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6e-20 Score=161.61 Aligned_cols=146 Identities=31% Similarity=0.575 Sum_probs=132.4
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~ 416 (489)
..++.++..++..+|..+|.+++|+|+..||..+|..+|...+..++..++..+|.+++|.|+|+||+.++... .....
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 88 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP 88 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence 46788899999999999999999999999999999999988888999999999999999999999999887543 23344
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
++.++.+|+.+|.|++|.|+.+||..++..+| +++.++..++..+|.|++|.|+|+||+.+|...+.
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKTNL 157 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcccC
Confidence 57789999999999999999999999999887 88999999999999999999999999999987543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-20 Score=182.89 Aligned_cols=150 Identities=29% Similarity=0.472 Sum_probs=124.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCC-cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC---CCCeeEEEEEE-EeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQ-KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG---HPNVIQIVGAY-EDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~---hpniv~~~~~~-~~~~~ 203 (489)
.|.+.++||+|+||.||+|.+..++ ..+|+|+......... ..+..|+.+|..+.. -.++..+++.+ .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 5999999999999999999988774 6789998765322111 267789999999942 36899999999 57888
Q ss_pred EEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC--CCCCeEEEeeccc
Q 040003 204 VHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ--EEAPLKTIDFGLS 279 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~--~~~~~kl~DFGla 279 (489)
.||||+++ |.+|.++.... +.++...+..++.|++.+|+++|+.|+|||||||+|+++.... ....+.|+|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999998 78999977544 5799999999999999999999999999999999999996532 1257999999999
Q ss_pred ccc
Q 040003 280 MFF 282 (489)
Q Consensus 280 ~~~ 282 (489)
+.+
T Consensus 175 r~~ 177 (322)
T KOG1164|consen 175 RRF 177 (322)
T ss_pred ccc
Confidence 944
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.3e-20 Score=170.14 Aligned_cols=138 Identities=27% Similarity=0.312 Sum_probs=113.5
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
+.||+|++|.||+|.+ .+..+++|+......... ....++.+|++++..+ .|++|+....++.+....++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999987 667899998654322211 1234678999999999 7999887777777778899999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||++|++|.+.+.... . ....++.+++.+|.++|+.|++|||++|+|||+. .+.++|+|||++...
T Consensus 79 e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~~ 144 (211)
T PRK14879 79 EYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEFS 144 (211)
T ss_pred EEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccCC
Confidence 9999999998875432 2 7788899999999999999999999999999993 567999999999763
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.7e-20 Score=158.83 Aligned_cols=143 Identities=38% Similarity=0.712 Sum_probs=129.2
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~ 416 (489)
..++.++...++..|..+|.+++|.|+.+||..++..++..+...++..++..+|.+++|.|+|+||+.++... .....
T Consensus 3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~ 82 (149)
T PTZ00184 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDS 82 (149)
T ss_pred CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcH
Confidence 45778889999999999999999999999999999999988888999999999999999999999999887653 22334
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.+..+|+.+|.|++|+|+.+||..++..+| ++.+++..+++.+|.+++|.|+|+||+.+|.+
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 56788999999999999999999999999887 68999999999999999999999999998864
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=189.72 Aligned_cols=155 Identities=24% Similarity=0.408 Sum_probs=133.9
Q ss_pred eeecceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
..+.+.||+|.||.|++|.... ....||||.++... ...+.+.+..|+++|+.+..|+||+.++|++...+
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 3566799999999999997431 14579999886543 33677899999999999988999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ 266 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~ 266 (489)
.+++|+|||..|+|..++...+ .+...+...+..||+.|++||++.++|||||-..|||+ .
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi---~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI---T 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe---c
Confidence 9999999999999999998765 37888999999999999999999999999999999999 6
Q ss_pred CCCCeEEEeeccccccCCCCcee
Q 040003 267 EEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 267 ~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
.+..+||+|||+|+.......+.
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~ 475 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYR 475 (609)
T ss_pred CCCEEEEccccceeccCCCCceE
Confidence 67789999999999766555544
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=146.85 Aligned_cols=139 Identities=28% Similarity=0.569 Sum_probs=129.1
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH-Hhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML-HLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~-~~~~~~~ 416 (489)
..+++.++.+++++|.++|.|++|.|+.++|+.+|..+|..+++++++.++.+ ..|-|+|.-|+.++- ++.....
T Consensus 24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdp 99 (171)
T KOG0031|consen 24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDP 99 (171)
T ss_pred HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCH
Confidence 46788999999999999999999999999999999999999999999999975 468999999999885 3556677
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.+..||+.||.+++|+|..+.|+++|...| +++++|++|++.+-.|..|.|+|.+|+.++..
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ith 165 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITH 165 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHc
Confidence 89999999999999999999999999999998 89999999999999999999999999999973
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=165.80 Aligned_cols=135 Identities=24% Similarity=0.277 Sum_probs=106.5
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCC-----HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT-----EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.||+|+||.||+|.. ++..+++|......... .....++.+|++++..+ .|+++....-++......++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEE
Confidence 389999999999984 56789999865432221 11235678999999999 67765554445556667799999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|++|++|.+.+..... .++.+++.+|.+||+.||+|||+||+|||+ + .+.++++|||++....
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~---~-~~~~~liDfg~a~~~~ 140 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV---R-DDKLYLIDFGLGKYSD 140 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEE---E-CCcEEEEECCCCcCCC
Confidence 9999999887754321 788999999999999999999999999999 3 5779999999987643
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.6e-20 Score=166.61 Aligned_cols=140 Identities=19% Similarity=0.228 Sum_probs=108.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-------------------HHHHHHHHHHHHHHHhcCCC-
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-------------------EDVEDVRREIRIMHHLAGHP- 189 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-------------------~~~~~~~~E~~~l~~l~~hp- 189 (489)
|.+.+.||+|+||.||+|... +|+.||||++........ .......+|+.++..+ .|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcC
Confidence 788899999999999999875 799999998765321000 0112367899999999 566
Q ss_pred -CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 190 -NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 190 -niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
.++..++ ....++||||++|++|..... ......++.+++.++.++|..||+||||||+||++ +.+
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~~ 161 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DDD 161 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cCC
Confidence 4455544 245689999999998865432 13456788999999999999999999999999999 567
Q ss_pred CCeEEEeeccccccCC
Q 040003 269 APLKTIDFGLSMFFRP 284 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~ 284 (489)
+.++|+|||++.....
T Consensus 162 ~~~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcEEEEECCccccCCC
Confidence 8899999999976654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.3e-19 Score=186.37 Aligned_cols=140 Identities=23% Similarity=0.268 Sum_probs=111.9
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.|...+.||+|+||+||+|.+... .+++|+...+... .....+++.+|+++++.+ +|++|+..+.++.+...
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeCCC
Confidence 456678999999999999987543 4455543222111 112345788999999999 79999988888777778
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.++||||++|++|.+++. ....++.+++.+|.+||+.||+||||||+|||+ + ++.++|+|||+|+...
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl---~-~~~~~liDFGla~~~~ 478 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV---R-DDRLYLIDFGLGKYSD 478 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE---E-CCcEEEEeCcccccCC
Confidence 899999999999998874 346788999999999999999999999999999 2 4569999999998753
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.1e-19 Score=140.98 Aligned_cols=139 Identities=23% Similarity=0.455 Sum_probs=123.5
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC--CCcceehHHHHHHHHHhhh---h
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSGTMDYGEFIAAMLHLNK---I 414 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d--~~g~I~f~eF~~~~~~~~~---~ 414 (489)
+++++..+++++|..||..++|+|+..+....|+++|.++++.++.+.+...+.+ +-.+|+|++|+.++..+.+ .
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q 84 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ 84 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence 5667789999999999999999999999999999999999999999999998877 4578999999998876532 2
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
-..+...+.++.||++++|.|...||+.+|..+| ++++|++.++.-. .|.+|.|+|+.|++.+.
T Consensus 85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 3356677889999999999999999999999999 9999999999875 58899999999998764
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.3e-19 Score=159.68 Aligned_cols=142 Identities=17% Similarity=0.225 Sum_probs=101.4
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHH---------------------HHHHHHHHHHHhcCC-CC
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE---------------------DVRREIRIMHHLAGH-PN 190 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~h-pn 190 (489)
++.||+|+||+||+|.+. +++.||||++............ ....|...+.++..+ -.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999876 7899999998754322111111 124677777777322 23
Q ss_pred eeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCC
Q 040003 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 191 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~ 269 (489)
+.+.+++ ...++||||++|+.+........... ..+..++.+++.++.++|. .||+||||||+||++ + ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili---~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV---D-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE---E-CC
Confidence 5555543 24689999999854432111111111 6678899999999999999 999999999999999 4 67
Q ss_pred CeEEEeeccccccCC
Q 040003 270 PLKTIDFGLSMFFRP 284 (489)
Q Consensus 270 ~~kl~DFGla~~~~~ 284 (489)
.++|+|||.|.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 899999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.9e-18 Score=180.99 Aligned_cols=181 Identities=24% Similarity=0.384 Sum_probs=132.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~ 205 (489)
+.|.|.+.||+|+||+||+|.... |+.||+|+-+...... |.-=.+++.+|+ --+.|..+..++...+..+
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 458899999999999999999877 9999999875543221 111112233331 1245666666667777889
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee----CCCCCCeEEEeeccccc
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN----QQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~----~~~~~~~kl~DFGla~~ 281 (489)
||+||.+.|+|.+++...+.+++..+..+..|++..++.||..+|||+||||+|+||.. +.....++|||||-|..
T Consensus 771 lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred eeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 99999999999999987788999999999999999999999999999999999999953 22355699999999964
Q ss_pred c---CCCCceee-eeeccC---------------CCCcchhHHHHHHHhcccccC
Q 040003 282 F---RPGLTFRV-WLRLHF---------------LFFQKQRQSVLQTRLVRNLNE 317 (489)
Q Consensus 282 ~---~~~~~~~~-~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~ 317 (489)
+ .++.++.. |-+..+ .|+|. ..++..++-|+|--
T Consensus 851 m~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGl--Aa~~h~mLFG~y~q 903 (974)
T KOG1166|consen 851 MKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGL--AATVHVMLFGKYME 903 (974)
T ss_pred eeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHH--HHHHHHHHHHHHHH
Confidence 4 45544443 211111 22232 45677777777744
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=162.20 Aligned_cols=149 Identities=36% Similarity=0.618 Sum_probs=129.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCC-CeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP-NVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~~~~~~~~~~~lv~ 208 (489)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+ .|+ +|+++++.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEE
Confidence 678889999999999999987 78999999876554444567899999999999 566 8999999998888899999
Q ss_pred eecCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
+|+.++++.+.+.... .+.......++.|++.++.|+|+.+++||||||+|||+ +... .+|++|||+++.+..
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~---~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL---DRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---cCCCCeEEEeccCcceecCC
Confidence 9999999997776654 78999999999999999999999999999999999999 5555 699999999986654
Q ss_pred C
Q 040003 285 G 285 (489)
Q Consensus 285 ~ 285 (489)
.
T Consensus 155 ~ 155 (384)
T COG0515 155 P 155 (384)
T ss_pred C
Confidence 3
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=154.92 Aligned_cols=139 Identities=19% Similarity=0.257 Sum_probs=104.7
Q ss_pred ceec-cCCceEEEEEEEcCCCcEEEEEEeecccC----------CCHHHHHHHHHHHHHHHHhcCCCCe--eEEEEEEEe
Q 040003 134 RKLG-QGQFGTTFLCVEKATQKEFACKSIAKRKL----------TTEEDVEDVRREIRIMHHLAGHPNV--IQIVGAYED 200 (489)
Q Consensus 134 ~~lG-~G~fg~Vy~~~~~~~~~~~avK~i~~~~~----------~~~~~~~~~~~E~~~l~~l~~hpni--v~~~~~~~~ 200 (489)
..|| .||.|+||.+... +..+++|.+....+ .......++.+|++++.+| .|++| +..+++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeeee
Confidence 4577 7888888887653 67899998864321 1112345788999999999 67774 677776443
Q ss_pred C-C---eEEEEEeecCC-CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 201 A-V---AVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 201 ~-~---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
. . ..++||||++| .+|.+++.. ..+++. .+.+|+.++.+||++||+||||||+|||+ +.++.++|+|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv---~~~~~v~LID 185 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE-APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILL---DPDGKFWLID 185 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEE---cCCCCEEEEE
Confidence 2 2 23599999997 688877644 455544 35689999999999999999999999999 5556899999
Q ss_pred eccccccC
Q 040003 276 FGLSMFFR 283 (489)
Q Consensus 276 FGla~~~~ 283 (489)
||.+....
T Consensus 186 fg~~~~~~ 193 (239)
T PRK01723 186 FDRGELRT 193 (239)
T ss_pred CCCcccCC
Confidence 99998865
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-17 Score=146.09 Aligned_cols=142 Identities=29% Similarity=0.484 Sum_probs=118.2
Q ss_pred hccHHHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcc-eehHHHHHHHHHhhhhhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT-MDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~-I~f~eF~~~~~~~~~~~~ 416 (489)
.++..++..|...|..+|.+ ++|+++.+||..+. .+..++ -..++++.+|.+++|. |+|++|+..+..+.....
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np---~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~ 101 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNP---LADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKAS 101 (187)
T ss_pred ccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCc---HHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCcc
Confidence 47889999999999999999 99999999999987 444444 3445667777888888 999999999987765544
Q ss_pred -HHHHHhhcccccccCCCcccHHHHHHHHHHcC---CC--HHH----HHHHHHHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 417 -EDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LD--DTQ----LEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 417 -~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~--~~~----~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
+++++.||+.||.|++|+|+.+||.+++..+- .+ ++. ++.+|.++|.|+||+|+|+||.+++.+.+..
T Consensus 102 ~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~ 179 (187)
T KOG0034|consen 102 KREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDL 179 (187)
T ss_pred HHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccH
Confidence 45999999999999999999999999997752 33 443 5667899999999999999999999877443
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=145.37 Aligned_cols=138 Identities=29% Similarity=0.401 Sum_probs=123.4
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC-CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAA 423 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~-~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~ 423 (489)
-..+...|...|.|..|+|+.+||+.+|..... ....+.+.-|+..+|.+.+|+|+|+||..++..++.+. .+
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr------~v 129 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWR------NV 129 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHH------HH
Confidence 346778999999999999999999999987654 46788899999999999999999999999998776654 79
Q ss_pred cccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcccc
Q 040003 424 FSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVF 488 (489)
Q Consensus 424 F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~f 488 (489)
|+.||+|++|.|+..||+.+|..+| ++++-++-+++++|.-++|.|.|++|+++|.....++++|
T Consensus 130 F~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~F 196 (221)
T KOG0037|consen 130 FRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAF 196 (221)
T ss_pred HHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 7899999999999988899999999999998766655555
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.7e-17 Score=144.12 Aligned_cols=145 Identities=26% Similarity=0.396 Sum_probs=123.6
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..+++.++..+++-|.. ..++|.++.++|+.++...... -+....+.+|+.+|.|++|.|+|.||+.++........
T Consensus 21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ 98 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL 98 (193)
T ss_pred cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence 46778888888888866 5678999999999999998864 34566788999999999999999999999998888888
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc----CC---------CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF----GL---------DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g~---------~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
++++..+|++||.|++|+|+.+|+..+++.+ |- ..+-++.+|+++|.|+||.|+++||+..+...+.
T Consensus 99 eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~ 178 (193)
T KOG0044|consen 99 EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPS 178 (193)
T ss_pred HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHH
Confidence 9999999999999999999999998887653 21 1345789999999999999999999998875543
Q ss_pred C
Q 040003 484 G 484 (489)
Q Consensus 484 ~ 484 (489)
.
T Consensus 179 i 179 (193)
T KOG0044|consen 179 I 179 (193)
T ss_pred H
Confidence 3
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.3e-17 Score=141.09 Aligned_cols=135 Identities=23% Similarity=0.285 Sum_probs=111.2
Q ss_pred ecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-CCeeEEEEEEEeCCeEEEEEee
Q 040003 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-PNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 132 ~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~~~~~~~~lv~e~ 210 (489)
+.+.||+|.++.||++.... ..+++|.+..... ...+.+|+.+++.+.++ .++++++.++...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35679999999999998754 6899998854321 35788999999999534 6899999998888899999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 211 CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL---GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 211 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+.|+.+..+ +......+..++..++.++|.. +++|+||||+|||+ +..+.++++|||+++...
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~---~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV---DDGKILGIIDWEYAGYGP 140 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE---ECCcEEEEEecccccCCC
Confidence 998877543 4556677889999999999985 69999999999999 446789999999997654
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-17 Score=175.33 Aligned_cols=155 Identities=32% Similarity=0.498 Sum_probs=125.1
Q ss_pred cce-eecceeccCCceEEEEEEEcCCCcEEEEEEeecc--cCCCHHH-HHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMY-SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKR--KLTTEED-VEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y-~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~--~~~~~~~-~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.| .....+|.|++|.|+.+......+.++.|..+.+ ....... ...+..|+.+-..| .|||++..+..+.+...
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhccc
Confidence 335 4567899999999998888777777777765432 1122222 22366788888888 79999988887777666
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.+-+||||++ +|+.++...+.+...++.++++|++.||.|+|+.||.|||||++|+|+ ...+.+||+|||.+..+.
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~---~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV---TENGILKIIDFGAASVFR 471 (601)
T ss_pred chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE---ecCCceEEeecCcceeec
Confidence 6666999999 999999887889999999999999999999999999999999999999 677899999999998876
Q ss_pred CCCc
Q 040003 284 PGLT 287 (489)
Q Consensus 284 ~~~~ 287 (489)
-+-.
T Consensus 472 ~~~e 475 (601)
T KOG0590|consen 472 YPWE 475 (601)
T ss_pred cCcc
Confidence 5443
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.3e-16 Score=146.07 Aligned_cols=136 Identities=26% Similarity=0.460 Sum_probs=124.4
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
...++...+++.+|+.+|.+++|+++..+|...+.++... ...+-...+++.+|.|.||.+||+||...+. ..|
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E 81 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKE 81 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhH
Confidence 4556677789999999999999999999999999999876 6677788999999999999999999998775 457
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.++...|+.+|.|+||.|+.+|+.+.|+.+| +++++++.+++++|+|+++.|+++||.+.+.
T Consensus 82 ~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 82 LELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred HHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence 7889999999999999999999999999999 7899999999999999999999999998775
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-17 Score=167.31 Aligned_cols=183 Identities=24% Similarity=0.344 Sum_probs=149.3
Q ss_pred eeccCCceEEEEEEE---cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 135 KLGQGQFGTTFLCVE---KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~---~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
.+|+|+||.|++++. ...+..+|+|+.++......... ....|-.++..+.+||.+|++...|+.....|++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998653 34577899999887655443332 55678888888866999999999999999999999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce--e
Q 040003 212 AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF--R 289 (489)
Q Consensus 212 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~--~ 289 (489)
.||+|+..+.....+.+.....+...++-+++++|..+|+|||+|++||++ +.+|++|+.|||+++........ +
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~cgt 156 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIACGT 156 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhcccc
Confidence 999999999988889999999999999999999999999999999999999 89999999999999987554433 1
Q ss_pred e------e--------------------eeccCCCCcchhHHHHHHHhcccccCCCCCCCCC
Q 040003 290 V------W--------------------LRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDK 325 (489)
Q Consensus 290 ~------~--------------------~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 325 (489)
. + +++.-||.+ ++...|+..++.+|...|...
T Consensus 157 ~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a 214 (612)
T KOG0603|consen 157 YEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEA 214 (612)
T ss_pred hhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHH
Confidence 1 1 223335554 677777777888887777554
|
|
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3e-14 Score=115.52 Aligned_cols=146 Identities=21% Similarity=0.377 Sum_probs=115.0
Q ss_pred hccHHHHHHHHHHHhhhcCC-----------CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHH
Q 040003 339 SLSEEEIAGLKEMFKMIDTD-----------NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d-----------~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~ 407 (489)
-++..++-++...|..+.++ +.-.+..+. ..-|..+..++-.+.|-+.| ..||.|.++|++|+.+
T Consensus 21 FFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~-i~kMPELkenpfk~ri~e~F---SeDG~GnlsfddFlDm 96 (189)
T KOG0038|consen 21 FFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFEL-IEKMPELKENPFKRRICEVF---SEDGRGNLSFDDFLDM 96 (189)
T ss_pred cccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHH-HhhChhhhcChHHHHHHHHh---ccCCCCcccHHHHHHH
Confidence 46777888888888877554 122455544 44466666666666555555 4799999999999999
Q ss_pred HHHhhh-hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHH----HHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 408 MLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQL----EDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 408 ~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~----~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
++.+.. ..++-++..||+.||-|+|++|..++|...+..+. ++++|+ +++++++|.|+||+|+|.||.+++.
T Consensus 97 fSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 97 FSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 876653 34566788999999999999999999999998774 888774 6789999999999999999999999
Q ss_pred hCCCCcccc
Q 040003 480 DSGLGKKVF 488 (489)
Q Consensus 480 ~~~~~~~~f 488 (489)
+++...+.|
T Consensus 177 raPDFlsTF 185 (189)
T KOG0038|consen 177 RAPDFLSTF 185 (189)
T ss_pred hCcchHhhh
Confidence 998888776
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.4e-16 Score=168.91 Aligned_cols=94 Identities=22% Similarity=0.289 Sum_probs=75.3
Q ss_pred CC-CCeeEEEEEE-------EeCCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 040003 187 GH-PNVIQIVGAY-------EDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKP 257 (489)
Q Consensus 187 ~h-pniv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp 257 (489)
.| +||++++++| .....++++|||+ +++|.++|... ..+++..+..+++||+.||.|||++|||||||||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP 108 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP 108 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence 35 5788888877 3334677889987 66999999653 4589999999999999999999999999999999
Q ss_pred CCEeeee----------------CCCCCCeEEEeeccccc
Q 040003 258 ENFLFIN----------------QQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 258 ~Nill~~----------------~~~~~~~kl~DFGla~~ 281 (489)
+||||.. .+..+.+||+|||+++.
T Consensus 109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~ 148 (793)
T PLN00181 109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRR 148 (793)
T ss_pred hhEEEcccCcEEEeeccccCcccccccCcccccccccccc
Confidence 9999942 12345678888888764
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=146.39 Aligned_cols=144 Identities=21% Similarity=0.225 Sum_probs=97.6
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC--------------------------H-HHH----------HHHH
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT--------------------------E-EDV----------EDVR 176 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~--------------------------~-~~~----------~~~~ 176 (489)
+.||.|++|.||+|+.+ +|+.||||+.+...... . .-. -.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56999999999999865 78999999975431000 0 000 0245
Q ss_pred HHHHHHHHhc----CCCCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHH-HHHHHHHCCC
Q 040003 177 REIRIMHHLA----GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVG-VVEACHSLGV 250 (489)
Q Consensus 177 ~E~~~l~~l~----~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~-~l~~lH~~~i 250 (489)
+|++.+.++. ++++|.-..-++......+|||||++|++|.+..... .... ...+...++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 5666666653 2444332222223344579999999999998876432 1222 2334445544 4678899999
Q ss_pred eecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 251 MHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 251 iHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|+|+||+||++ +.++.++|+|||++..+.+
T Consensus 279 ~H~D~hPgNilv---~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 279 FHADLHPGNIFV---LKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred eeCCCCcccEEE---CCCCcEEEEeCCCeeECCH
Confidence 999999999999 6678899999999987753
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-15 Score=156.10 Aligned_cols=148 Identities=18% Similarity=0.248 Sum_probs=95.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--------------------------C-H----HHHHH----
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--------------------------T-E----EDVED---- 174 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--------------------------~-~----~~~~~---- 174 (489)
|+. +.||.|++|.||+|+.+.+|+.||||++++.... . . +..+.
T Consensus 122 fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 122 FDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred cCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 555 6899999999999999888999999999753100 0 0 11122
Q ss_pred --HHHHHHHHHHhc---CCCCeeEEEEEEE-eCCeEEEEEeecCCCchHHH--HHHcC----CCCHHHHHHHHHHHHHHH
Q 040003 175 --VRREIRIMHHLA---GHPNVIQIVGAYE-DAVAVHVVMELCAGGELFDR--IIQRG----HYTERKAADLTRIIVGVV 242 (489)
Q Consensus 175 --~~~E~~~l~~l~---~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~--l~~~~----~~~~~~~~~~~~~i~~~l 242 (489)
+.+|+..+.++. .+.+.+.+-..|. -....+||||||.|+.+.+. +...+ .+.+..+..++.|+
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi---- 276 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV---- 276 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH----
Confidence 344555555542 1333333333332 24567899999999999764 33333 13333334444444
Q ss_pred HHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeeccccccCCC
Q 040003 243 EACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 243 ~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla~~~~~~ 285 (489)
+..|++|+|+||+||++..++ ..+.++++|||++..+...
T Consensus 277 ---f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 ---FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred ---HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 468999999999999994321 1238999999999888544
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=131.35 Aligned_cols=154 Identities=20% Similarity=0.275 Sum_probs=124.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-eC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-DA 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~ 201 (489)
.++++...+-+|.||.||.|.++... +.|-+|.++.. ..+-++..++.|.-.+..+ .|||+..+.+... +.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIEDY 360 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcC-cCCCccceeEEEeecc
Confidence 45788889999999999999766432 34556655432 3455667889999999998 6999999999875 45
Q ss_pred CeEEEEEeecCCCchHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
...++++.++.-|+|..+|... ..++..+...++.|+..|++|||.+||||.||-..|++| ++..++||
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVkl 437 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKL 437 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEe
Confidence 5678889999889999888621 235667788889999999999999999999999999999 77789999
Q ss_pred EeeccccccCCCCc
Q 040003 274 IDFGLSMFFRPGLT 287 (489)
Q Consensus 274 ~DFGla~~~~~~~~ 287 (489)
+|=.+++.+-+++.
T Consensus 438 tDsaLSRDLFP~DY 451 (563)
T KOG1024|consen 438 TDSALSRDLFPGDY 451 (563)
T ss_pred ccchhccccCcccc
Confidence 99999998776554
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.2e-13 Score=122.29 Aligned_cols=143 Identities=11% Similarity=0.106 Sum_probs=103.2
Q ss_pred ceeccCCceEEEEEEEcC------CCcEEEEEEeecccCC----------C---------HHHHHH----HHHHHHHHHH
Q 040003 134 RKLGQGQFGTTFLCVEKA------TQKEFACKSIAKRKLT----------T---------EEDVED----VRREIRIMHH 184 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~------~~~~~avK~i~~~~~~----------~---------~~~~~~----~~~E~~~l~~ 184 (489)
..||.|-=+.||.|.... .+..+|||+.+..... . ...... ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 3578999987532110 0 011222 3389999999
Q ss_pred hcCC-CCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEee
Q 040003 185 LAGH-PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC-HSLGVMHRDLKPENFLF 262 (489)
Q Consensus 185 l~~h-pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l-H~~~iiHrDlKp~Nill 262 (489)
+... -++.+++++ ...+|||||+.+..+.....+...+++..+..+..+++.++..| |..||||+||++.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 9533 567777765 45689999997654433222333456667778889999999988 89999999999999999
Q ss_pred eeCCCCCCeEEEeeccccccCC
Q 040003 263 INQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 263 ~~~~~~~~~kl~DFGla~~~~~ 284 (489)
. ++.+.|+|||.|.....
T Consensus 159 ~----~~~v~iIDF~qav~~~h 176 (197)
T cd05146 159 H----DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred E----CCcEEEEECCCceeCCC
Confidence 3 35699999999876643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.51 E-value=9e-14 Score=123.66 Aligned_cols=129 Identities=17% Similarity=0.146 Sum_probs=95.4
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+.|+.|.++.||++... ++.|++|+...... ....+.+|+.+++.+.+...+.+++.+.. ...++||||++|
T Consensus 4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G 75 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG 75 (170)
T ss_pred eecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence 56899999999998864 77899998754321 12345789999999843333456665543 345899999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGV-----MHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 214 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-----iHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++... ......++.+++.+|..||..++ +|+|+||.||++. ++.++++|||.+..-
T Consensus 76 ~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~~ 137 (170)
T cd05151 76 SELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGMN 137 (170)
T ss_pred Cccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccCC
Confidence 887543 01123456789999999999985 9999999999993 456999999998754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.2e-14 Score=134.39 Aligned_cols=95 Identities=32% Similarity=0.452 Sum_probs=77.3
Q ss_pred hcCCCCeeEEEEEEEe---------------------------CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHH
Q 040003 185 LAGHPNVIQIVGAYED---------------------------AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237 (489)
Q Consensus 185 l~~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 237 (489)
|..|||||++.++|.+ ...+|+||.-+.. +|..++..+ ..+....+.++.|
T Consensus 272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQ 349 (598)
T ss_pred cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHH
Confidence 3479999999988853 3468999988854 898888654 4566778889999
Q ss_pred HHHHHHHHHHCCCeecCCCCCCEeeeeC-CCCCCeEEEeeccccc
Q 040003 238 IVGVVEACHSLGVMHRDLKPENFLFINQ-QEEAPLKTIDFGLSMF 281 (489)
Q Consensus 238 i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~~~~kl~DFGla~~ 281 (489)
++.|+.|||.+||.|||+|.+|||+--+ |.--.+.|+|||.+--
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA 394 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA 394 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence 9999999999999999999999999543 3445688999998753
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.3e-13 Score=125.72 Aligned_cols=188 Identities=23% Similarity=0.253 Sum_probs=117.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC---------CCCeeEEEEEE-
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG---------HPNVIQIVGAY- 198 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~---------hpniv~~~~~~- 198 (489)
.+..++.||.|+|+.||.+++..|++.+|+|+............+.+++|.-....+.+ |-.++-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 36678899999999999999999999999999876554445567778777754444311 21222222221
Q ss_pred --------EeC---C-----eEEEEEeecCCCchHHHHH---HcCCCC--H-HHH-HHHHHHHHHHHHHHHHCCCeecCC
Q 040003 199 --------EDA---V-----AVHVVMELCAGGELFDRII---QRGHYT--E-RKA-ADLTRIIVGVVEACHSLGVMHRDL 255 (489)
Q Consensus 199 --------~~~---~-----~~~lv~e~~~~g~L~~~l~---~~~~~~--~-~~~-~~~~~~i~~~l~~lH~~~iiHrDl 255 (489)
... . +.+++|+-+ .++|.+.+. ...... . ..+ ..+..|++..+++||+.||||+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 111 1 346778877 458877653 232221 1 122 345588999999999999999999
Q ss_pred CCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---------e-----------eeccCCCCcchhHHHHHHHhcccc
Q 040003 256 KPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV---------W-----------LRLHFLFFQKQRQSVLQTRLVRNL 315 (489)
Q Consensus 256 Kp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~---------~-----------~~~~ypf~~~~~~~~~~~i~~~~~ 315 (489)
||+|+++ +.+|.++|+||+............. + ....+..+.+..+.++..|.++.+
T Consensus 172 ~~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLL---DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEE---cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 9999999 7889999999987655432111000 0 011123455667889999999998
Q ss_pred cCCCC
Q 040003 316 NEPGS 320 (489)
Q Consensus 316 ~~~~~ 320 (489)
+|...
T Consensus 249 Pf~~~ 253 (288)
T PF14531_consen 249 PFGLS 253 (288)
T ss_dssp STCCC
T ss_pred CCCCC
Confidence 88743
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.7e-12 Score=109.12 Aligned_cols=153 Identities=18% Similarity=0.171 Sum_probs=113.2
Q ss_pred ecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 132 ~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
....|-||+=+.|+++.+ .|+.+.||.=..+... ..-...+.++|+++|.++ .--.|.--.=+|.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEEEEecCCCeE
Confidence 345788999999999875 5777777753332222 223346788999999998 34455444446777777889
Q ss_pred EEeecCC-CchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 207 VMELCAG-GELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 207 v~e~~~~-g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|||++| .++.+++.... .........++++|-..+.-||..+|||+||..+||+|..++....+-|+|||++....
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~ 167 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSR 167 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhccc
Confidence 9999977 47777776542 22333336889999999999999999999999999999877777778999999998765
Q ss_pred CCCc
Q 040003 284 PGLT 287 (489)
Q Consensus 284 ~~~~ 287 (489)
..+.
T Consensus 168 ~~ED 171 (229)
T KOG3087|consen 168 LPED 171 (229)
T ss_pred Cccc
Confidence 5444
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.4e-14 Score=148.38 Aligned_cols=111 Identities=34% Similarity=0.538 Sum_probs=83.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|..++.|-.|+||.||+++|+.+.+.+|+| +.+..+ +.|- |+... +.|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l--------ilRn--ilt~a-~npfvv--------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL--------ILRN--ILTFA-GNPFVV--------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccch--------hhhc--ccccc-CCccee---------------
Confidence 34888999999999999999999999999994 444322 1111 33332 455555
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|+-...++.-+.++..- +.+++|||+.||+|||+||+|+|+ ..-|++|+.|||+++..
T Consensus 136 ------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllI---T~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred ------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCccee---eecccccccchhhhhhh
Confidence 45555565555655433 778999999999999999999999 77899999999998753
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-12 Score=121.81 Aligned_cols=139 Identities=20% Similarity=0.342 Sum_probs=114.0
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-------h--
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-------K-- 413 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-------~-- 413 (489)
+...++..+|..+|.+.+|+|+..||+.++..........+..+-+..+|.|.||.|+|+||+..+.... .
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 3567788999999999999999999999998776555667778888999999999999999999887531 0
Q ss_pred -hhhHHH----HHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 414 -IQREDH----MYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 414 -~~~~~~----l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.....+ =+..|+..|.|+||.++.+||..+|..-. |.+-.|.+-+..+|+|+||+|+++||+.-|.+.
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~ 229 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSH 229 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhc
Confidence 011112 24689999999999999999999985433 567788999999999999999999999777543
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.3e-12 Score=108.21 Aligned_cols=138 Identities=25% Similarity=0.244 Sum_probs=98.3
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 135 ~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.+++|+=+.+|.+... |..+.+|.=.++....+ -...+..+|+.+|.++. --.|..-+=++.+.....|+||
T Consensus 3 ~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEEE
Confidence 5789999999998553 34466664322222221 22356779999999983 3344444444556677889999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|++|-.|.+.+... ...+++.+-..+.-||..||||+||.++||++.+ +.+.++||||+.+-....
T Consensus 80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~----~~i~~IDfGLg~~s~~~E 145 (204)
T COG3642 80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSG----GRIYFIDFGLGEFSDEVE 145 (204)
T ss_pred EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeC----CcEEEEECCcccccccHH
Confidence 99998888887654 2456677777778899999999999999999942 349999999998654433
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.1e-13 Score=144.20 Aligned_cols=144 Identities=20% Similarity=0.235 Sum_probs=115.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeeccc-CCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK-LTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~-~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.|...+.||.+.|=+|.+|.+.+ | .|+||++.+.. ...-....+...|++ ... .+|||++.+.-+.......|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l-~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FAL-MKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHh-hcCCcccchHHHHHhhHHHHHH
Confidence 37778899999999999998764 3 49999987654 222233344455666 333 3899999988777777888999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
-+|..+ +|+|+|..+.-+...+.+.|+.|++.||.-||..||+|+|||.+|||++ .-.-+.|+||..-+
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFK 168 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccC
Confidence 999865 9999998877778888899999999999999999999999999999994 44458899997654
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.6e-12 Score=131.54 Aligned_cols=105 Identities=18% Similarity=0.294 Sum_probs=94.7
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHH---HHHHHHccCCCCCcceehHHHHHHHHHhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSE---IDGLMQAGDIDNSGTMDYGEFIAAMLHLNK 413 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~---i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~ 413 (489)
..++..++.+++++|+.+|.|++|.+ |..+++.+| ..+++.+ ++.+|+.+|.|++|.|+|+||+.++..+..
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~ 210 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN 210 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence 35677888999999999999999997 888899999 5888877 899999999999999999999999876655
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
...++++.++|+.||+|++|+|+.+||+.+|..
T Consensus 211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 566788999999999999999999999999987
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-12 Score=100.50 Aligned_cols=63 Identities=22% Similarity=0.459 Sum_probs=58.7
Q ss_pred HHHHhhcccccc-cCCCcccHHHHHHHHHH-cC--CCH-HHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDK-DGSGYITPDELQTACQQ-FG--LDD-TQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~-d~~G~I~~~El~~~l~~-~g--~~~-~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..+|+.||+ +++|+|+.+||+.+|+. +| +++ +++++||+.+|.|+||+|+|+||+.+|..
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 457899999999 99999999999999998 87 777 89999999999999999999999999975
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.3e-12 Score=91.97 Aligned_cols=60 Identities=45% Similarity=0.856 Sum_probs=52.9
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcCC--CH----HHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFGL--DD----TQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~--~~----~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+++++|+.+|+|++|+|+.+||+.+++.++. ++ +.++.+++.+|.|+||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 3678999999999999999999999999883 34 456667999999999999999999886
|
... |
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=114.38 Aligned_cols=133 Identities=26% Similarity=0.352 Sum_probs=104.0
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhh--hH---
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQ--RE--- 417 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~--~~--- 417 (489)
.+.+-...|+.-|.|++|.++.+||...|.--- ..+..--|..-+..+|.|+||.|+++||+.-|....... .+
T Consensus 161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~ 240 (325)
T KOG4223|consen 161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVL 240 (325)
T ss_pred HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCccccc
Confidence 445557789999999999999999988773322 234445567788999999999999999999987643211 10
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCceeHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGL--DDTQLEDIIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~--~~~~~~~~~~~~d~d~dG~I~~~eF~~ 476 (489)
-+-.+.|...|+|+||+++.+|++.++..-+. ...++..++-+.|.|+||++|++|.+.
T Consensus 241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 241 TEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred ccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 11225566679999999999999999866554 577888999999999999999999774
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.2e-11 Score=112.05 Aligned_cols=145 Identities=27% Similarity=0.386 Sum_probs=100.1
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC---CeEEEEEe
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG-HPNVIQIVGAYEDA---VAVHVVME 209 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~---~~~~lv~e 209 (489)
+.||.|.++.||++.... |+.+++|........ .....+.+|+++++.+.. +.++.+++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 468999999999998643 578999987543221 123567899999999943 24567777776654 36789999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS------------------------------------------ 247 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~------------------------------------------ 247 (489)
|++|.++.+.+.. ..++......++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999887654321 234455555555555555555552
Q ss_pred --------------CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 248 --------------LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 248 --------------~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
..++|+|++|.|||+... ..+.+.|+||+.+..-.
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~g~ 208 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATLGD 208 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccccCC
Confidence 246999999999999431 14568999999887543
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=101.14 Aligned_cols=102 Identities=25% Similarity=0.359 Sum_probs=91.8
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCC-------CHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL-------DDTQL 454 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-------~~~~~ 454 (489)
.++..+|+.+|.|++|.|+-.|+-.++..+.....+.++..+++.+|.|++|.|+.+||..++...+. +.+++
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el 87 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEEL 87 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHH
Confidence 56788999999999999999999999987776677889999999999999999999999999987652 24589
Q ss_pred HHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 455 EDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 455 ~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
.++|+.+|.|+||.|+.+|+..+|...+.
T Consensus 88 ~eaF~~fD~d~~G~Is~~el~~~l~~lg~ 116 (151)
T KOG0027|consen 88 KEAFRVFDKDGDGFISASELKKVLTSLGE 116 (151)
T ss_pred HHHHHHHccCCCCcCcHHHHHHHHHHhCC
Confidence 99999999999999999999999987754
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.8e-11 Score=92.35 Aligned_cols=63 Identities=19% Similarity=0.467 Sum_probs=57.4
Q ss_pred HHHHhhccccc-ccCCC-cccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFD-KDGSG-YITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.++|+.|| +|++| +|+.+||+.+|+. +| .++++++++++.+|.|+||+|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45789999998 89999 5999999999998 77 57889999999999999999999999998864
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-10 Score=118.05 Aligned_cols=157 Identities=22% Similarity=0.305 Sum_probs=128.8
Q ss_pred Ccccceeecceecc--CCceEEEEEEE--cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 125 NLKEMYSLGRKLGQ--GQFGTTFLCVE--KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~--G~fg~Vy~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
.+...+.+...+|. |.+|.||.+.. ..++..+|+|.-+. .........+=.+|+...+.+..|+|.++.+..++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~-p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKI-PFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccC-CCCCccccccccchhhcccccCccccccccCccccc
Confidence 34455777888999 99999999988 88899999997322 222223334445788888888789999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCC-CCHHHHHHHHHHHHH----HHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEE
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVG----VVEACHSLGVMHRDLKPENFLFINQQEE-APLKTI 274 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~----~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~ 274 (489)
.+..|+-+|+|. .+|..+...... ++...++..+.+... ||.++|+.+|+|-|+||+||++ ..+ ...+++
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~---~~~~~s~~~~ 265 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT---TSDWTSCKLT 265 (524)
T ss_pred CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec---ccccceeecC
Confidence 999999999994 688777765544 888899999999999 9999999999999999999999 445 789999
Q ss_pred eeccccccCCCC
Q 040003 275 DFGLSMFFRPGL 286 (489)
Q Consensus 275 DFGla~~~~~~~ 286 (489)
|||+...+.++.
T Consensus 266 df~~v~~i~~~~ 277 (524)
T KOG0601|consen 266 DFGLVSKISDGN 277 (524)
T ss_pred CcceeEEccCCc
Confidence 999999887665
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-12 Score=135.52 Aligned_cols=151 Identities=27% Similarity=0.462 Sum_probs=125.8
Q ss_pred eeecceeccCCceEEEEEEEc-CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEK-ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
|.+.+.||+|+|+.|-.+... .....+|+|.+.... ........+..|..+-+.+.+|.|++++++...+....++++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 777888999999999887653 344567777765443 233445566778888888856999999999999999999999
Q ss_pred eecCCCchHHHH-HHcC-CCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCC
Q 040003 209 ELCAGGELFDRI-IQRG-HYTERKAADLTRIIVGVVEACH-SLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRP 284 (489)
Q Consensus 209 e~~~~g~L~~~l-~~~~-~~~~~~~~~~~~~i~~~l~~lH-~~~iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~ 284 (489)
+|..|+++++.+ .... ..+...+..++.|+..++.|+| ..++.||||||+|.++ +..+ .+|++|||+|..+..
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l---~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL---DESGSALKIADFGLATAYRN 177 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh---ccCCCcccCCCchhhccccc
Confidence 999999999988 4444 5778888999999999999999 9999999999999999 5566 899999999998876
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5e-10 Score=107.24 Aligned_cols=131 Identities=23% Similarity=0.442 Sum_probs=104.5
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHh-CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---h---------
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRV-GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---K--------- 413 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~l-g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---~--------- 413 (489)
.+...|+.+|.+.+|+|+...+..++..+ |.+++..-+..-+ +..+.||.+.|.+.+..+..-. .
T Consensus 465 dL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kl--a~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetL 542 (631)
T KOG0377|consen 465 DLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKL--ANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETL 542 (631)
T ss_pred HHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhc--cCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHH
Confidence 56678999999999999999999988764 6677666554323 3345677999998877653210 0
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
......+..+|+.+|+|++|.|+.+||+.+++-++ ++++++.++.+.+|.|+||+|++.||..+++
T Consensus 543 Yr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 543 YRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFR 614 (631)
T ss_pred HhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHh
Confidence 01124577899999999999999999999997764 7899999999999999999999999999986
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.3e-09 Score=100.66 Aligned_cols=137 Identities=21% Similarity=0.164 Sum_probs=93.8
Q ss_pred EEEEEEEcCCCcEEEEEEeecccCCC--------HHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEEe-----CCeEEEEE
Q 040003 143 TTFLCVEKATQKEFACKSIAKRKLTT--------EEDVEDVRREIRIMHHLAG-HPNVIQIVGAYED-----AVAVHVVM 208 (489)
Q Consensus 143 ~Vy~~~~~~~~~~~avK~i~~~~~~~--------~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~-----~~~~~lv~ 208 (489)
.|+++.. .|+.|.||......... ......+.+|...+.+|.. .-.++.++.+++. ....+|||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3555433 46678888653221100 0011246789998888831 1223444555543 23578999
Q ss_pred eecCCC-chHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC----CCCCCeEEEeeccccc
Q 040003 209 ELCAGG-ELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ----QEEAPLKTIDFGLSMF 281 (489)
Q Consensus 209 e~~~~g-~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~----~~~~~~kl~DFGla~~ 281 (489)
|++++. +|.+++.. ...........++.++...+.-||..||+|+|++++|||+..+ +....+.||||+.+..
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999886 78887753 2345666778899999999999999999999999999999531 2356799999998864
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.3e-10 Score=87.92 Aligned_cols=69 Identities=19% Similarity=0.282 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhhhcC-CCCCCccHHHHHHHHHH-hCCCCCH-HHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDT-DNSGYITLEELKKGLQR-VGANLMD-SEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~-d~~g~i~~~el~~~l~~-lg~~~~~-~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..|..+|+.+|. +++|+|+..||+.+|.. +|..++. .+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 456788999999999 99999999999999999 8877777 899999999999999999999999988654
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.7e-10 Score=98.71 Aligned_cols=132 Identities=20% Similarity=0.198 Sum_probs=82.4
Q ss_pred EEEEEEEcCCCcEEEEEEeecccCC-----------------------CHHHHHHHHHHHHHHHHhcCC-CCeeEEEEEE
Q 040003 143 TTFLCVEKATQKEFACKSIAKRKLT-----------------------TEEDVEDVRREIRIMHHLAGH-PNVIQIVGAY 198 (489)
Q Consensus 143 ~Vy~~~~~~~~~~~avK~i~~~~~~-----------------------~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~ 198 (489)
.||.|.. ..|..+|+|+.+..... .........+|.+.|.++... -++.+++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888886 46779999987542110 011234678999999999433 3677777553
Q ss_pred EeCCeEEEEEeecC--CCchHHHHHHcCCCCHHHHHHHHHHHHHHHH-HHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 199 EDAVAVHVVMELCA--GGELFDRIIQRGHYTERKAADLTRIIVGVVE-ACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 199 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~-~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
..+|||||++ |..+.. +... .+.......++.+++..+. .+|..||||+||.+.|||+. .+ .+.|+|
T Consensus 80 ----~~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~---~~-~~~iID 149 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD---DG-KVYIID 149 (188)
T ss_dssp ----TTEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE---TT-CEEE--
T ss_pred ----CCEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee---cc-eEEEEe
Confidence 3469999998 655543 3332 1224455667777777444 46899999999999999993 33 799999
Q ss_pred eccccccCCC
Q 040003 276 FGLSMFFRPG 285 (489)
Q Consensus 276 FGla~~~~~~ 285 (489)
||.|.....+
T Consensus 150 f~qav~~~~p 159 (188)
T PF01163_consen 150 FGQAVDSSHP 159 (188)
T ss_dssp GTTEEETTST
T ss_pred cCcceecCCc
Confidence 9998776543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.1e-10 Score=90.54 Aligned_cols=64 Identities=23% Similarity=0.523 Sum_probs=55.5
Q ss_pred HHHHhhccccc-ccCCC-cccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSYFD-KDGSG-YITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+..+|+.|| +|++| +|+.+||+.++.. ++ .++.++++|++++|.|+||.|+|+||+.+|...
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45678899998 89999 5999999999976 22 367899999999999999999999999999753
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.4e-10 Score=84.60 Aligned_cols=60 Identities=33% Similarity=0.480 Sum_probs=56.6
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+|+.+|.|++|.|+.+|++.++..+|++++++.++++.+|.+++|.|+|+||+.+|..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999998864
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.4e-10 Score=96.48 Aligned_cols=101 Identities=26% Similarity=0.331 Sum_probs=85.5
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---CCCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g~~~~~~~~~~ 458 (489)
.++..+|..+|.+++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++... .....++..+|
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 456778999999999999999998888654333345678899999999999999999999887653 24567899999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+.+|.|++|.|+++||..++...+
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~~~ 120 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKELG 120 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhC
Confidence 999999999999999999998654
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.6e-10 Score=90.07 Aligned_cols=64 Identities=30% Similarity=0.390 Sum_probs=59.8
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...+..+|+.||.|++|.|+.+||+.+++..|++++++++|+..+|.+++|.|+|+||+.+|..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999998853
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.4e-10 Score=82.93 Aligned_cols=62 Identities=39% Similarity=0.712 Sum_probs=53.1
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHH----HHHHHHHccCCCCCcceehHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDS----EIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~----~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
+|+++|+.+|.|++|+|+.+||..++..++...... .+..+|+.+|.|++|.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 478899999999999999999999999998765444 45556999999999999999998764
|
... |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=99.05 E-value=4e-10 Score=87.63 Aligned_cols=63 Identities=21% Similarity=0.552 Sum_probs=56.6
Q ss_pred HHHhhcccccc-cC-CCcccHHHHHHHHHH---cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 419 HMYAAFSYFDK-DG-SGYITPDELQTACQQ---FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 419 ~l~~~F~~~D~-d~-~G~I~~~El~~~l~~---~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+..+|..||. |+ +|+|+.+||+.+|+. +| +++++++++++.+|.|++|+|+|+||+.+|.+.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 46689999998 77 899999999999963 56 689999999999999999999999999999764
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.4e-09 Score=92.61 Aligned_cols=121 Identities=27% Similarity=0.437 Sum_probs=88.0
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccc
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYF 427 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~ 427 (489)
++-+-.+||.+.+|+|..+||+.+...+ ..+..+|+.+|.|++|+|+..|+..++..+--..+.+-+..+++.|
T Consensus 96 crlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~ky 169 (221)
T KOG0037|consen 96 CRLMISMFDRDNSGTIGFKEFKALWKYI------NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKY 169 (221)
T ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHH------HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHh
Confidence 3444566788888888888888777664 4677888888888888888888888776554444556666777888
Q ss_pred cccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCC--ceeHHHHHHHH
Q 040003 428 DKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG--RIDYSEFVAMM 478 (489)
Q Consensus 428 D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG--~I~~~eF~~~~ 478 (489)
|.-++|.|..++|.++|..+ ..+-+.|++.|++.+| +|+|++|+.+.
T Consensus 170 d~~~~g~i~FD~FI~ccv~L----~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 170 DRFGGGRIDFDDFIQCCVVL----QRLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred ccccCCceeHHHHHHHHHHH----HHHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 87778888888888877543 2455677778887777 56788888664
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-10 Score=117.32 Aligned_cols=151 Identities=23% Similarity=0.248 Sum_probs=124.9
Q ss_pred cceeecceeccCCceEEEEEEEc-CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
..|..+..||.|.|+.|+.+..+ .++..|++|.+.+.......+ ..-..|+-+...+..|.++++++..|....+.||
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 45778889999999999998755 678899999876544333322 3334688888888789999999999988889999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
-.|||+++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++.+++ +..++.|||++..
T Consensus 344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTR 416 (524)
T ss_pred chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccc
Confidence 999999998877765556688889999999999999999999999999999999996533 7789999999875
|
|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.6e-10 Score=88.67 Aligned_cols=64 Identities=25% Similarity=0.554 Sum_probs=57.3
Q ss_pred HHHHHhhccccc-ccCCC-cccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGSG-YITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++++|+.|| +|++| .|+.+||+.+|+. +| .++++++++|+.+|.|++|.|+|+||+.+|..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467889999997 99999 5999999999975 54 36889999999999999999999999999875
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.9e-10 Score=89.46 Aligned_cols=67 Identities=21% Similarity=0.550 Sum_probs=58.5
Q ss_pred HHHHHhhcccccc-cC-CCcccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 417 EDHMYAAFSYFDK-DG-SGYITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 417 ~~~l~~~F~~~D~-d~-~G~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
...++.+|+.||. |+ +|+|+.+||+.+|+. +| +++++++.+++.+|.|++|.|+|+||+.+|...++
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 4568899999997 97 799999999999975 33 57899999999999999999999999999976543
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.7e-11 Score=118.31 Aligned_cols=78 Identities=32% Similarity=0.450 Sum_probs=65.7
Q ss_pred eEEEEEeecCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
++||.|++|...+|.++|..+. ..+......++.|+..+++| +|.+|||+||.||.+ ..+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~---~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF---SDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc---ccchhhhhhhhhhe
Confidence 5789999999999999997543 34556778899999999999 999999999999999 44557999999999
Q ss_pred cccCCCC
Q 040003 280 MFFRPGL 286 (489)
Q Consensus 280 ~~~~~~~ 286 (489)
.......
T Consensus 404 ts~~~~~ 410 (516)
T KOG1033|consen 404 TSQDKDE 410 (516)
T ss_pred eecccCC
Confidence 8776554
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.3e-10 Score=85.97 Aligned_cols=64 Identities=22% Similarity=0.460 Sum_probs=56.1
Q ss_pred HHHHhhccc-ccccCCC-cccHHHHHHHHHHc-------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSY-FDKDGSG-YITPDELQTACQQF-------GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~-~D~d~~G-~I~~~El~~~l~~~-------g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+..+|+. +|+|++| +|+.+||+.++... ..++.+++++++.+|.|+||+|+|+||+.+|...
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 457789999 7898986 99999999999775 2567899999999999999999999999998753
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.6e-09 Score=95.86 Aligned_cols=101 Identities=19% Similarity=0.326 Sum_probs=84.7
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh-----------h
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK-----------I 414 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~-----------~ 414 (489)
.-...+|..+|.|++|.|+..||..+|..+.....++.+...|+.+|.|++|.|+++|++..+..+.. .
T Consensus 64 ~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~ 143 (193)
T KOG0044|consen 64 KYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEE 143 (193)
T ss_pred HHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccc
Confidence 34467899999999999999999999988876667778888999999999999999999887754321 1
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
..++....+|+.+|.|+||.||.+||...+..
T Consensus 144 ~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 144 TPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred cHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 23567789999999999999999999887654
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.00 E-value=2e-09 Score=83.66 Aligned_cols=69 Identities=20% Similarity=0.342 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMID-TDNSG-YITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..++++|+.+| .|++| .|+.+||+.+|+. +|...++.+++.+++.+|.|++|.|+|+||+.++...
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45678999999998 79999 5999999999999 8988999999999999999999999999999887643
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3e-09 Score=92.12 Aligned_cols=102 Identities=23% Similarity=0.286 Sum_probs=84.9
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
+++...|..+|.+++|.|+++||..++.........+.+..+|+.+|.|++|.|+.+||..++.... ...+.+..+|
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F 90 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAF 90 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 3456788899999999999999998876544333456788999999999999999999999886542 3456788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~ 115 (149)
T PTZ00184 91 KVFDRDGNGFISAAELRHVMTNLGE 115 (149)
T ss_pred HhhCCCCCCeEeHHHHHHHHHHHCC
Confidence 9999999999999999999976543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.5e-08 Score=93.01 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC----CeEEEEEeecCCC-chHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 040003 172 VEDVRREIRIMHHLAG-HPNVIQIVGAYEDA----VAVHVVMELCAGG-ELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245 (489)
Q Consensus 172 ~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~----~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l 245 (489)
..+..+|...+..|.. .=.+.+.+++.+.. ...+||+|++++. +|.+++......+......++.++...+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3467788888888732 22355666666543 2468999999884 7888887644567777889999999999999
Q ss_pred HHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 246 H~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|.+||+|+|+++.|||+..++....+.|+||+-++...
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999999999999999655444589999999887654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.7e-09 Score=88.11 Aligned_cols=101 Identities=24% Similarity=0.379 Sum_probs=86.0
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHH-cC--CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ-FG--LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~ 458 (489)
++++.-|..+|.+++|.|+++|+-.++..+.-....+++..+..-+|+++.|.|+.++|+.++.. +| -+.+++..+|
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~af 112 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAF 112 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHH
Confidence 57888999999999999999999777765543344566777888889999999999999998743 33 4789999999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+.+|.|++|+||+.+|+.++.+.|
T Consensus 113 rl~D~D~~Gkis~~~lkrvakeLg 136 (172)
T KOG0028|consen 113 RLFDDDKTGKISQRNLKRVAKELG 136 (172)
T ss_pred HcccccCCCCcCHHHHHHHHHHhC
Confidence 999999999999999999998765
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.4e-09 Score=88.84 Aligned_cols=101 Identities=22% Similarity=0.262 Sum_probs=87.9
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
+++.+.|..+|.|++|.|+++|+..++..+.....+..+..+|..+|. +.|.|+..+|..+|...- -+.+++..+|
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF 98 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAF 98 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 346778899999999999999999998766666677888899999999 999999999999986542 4589999999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|+||+|++.|+..++...+.
T Consensus 99 ~~fD~d~dG~Is~~eL~~vl~~lge 123 (160)
T COG5126 99 KLFDKDHDGYISIGELRRVLKSLGE 123 (160)
T ss_pred HHhCCCCCceecHHHHHHHHHhhcc
Confidence 9999999999999999999986543
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.7e-09 Score=83.62 Aligned_cols=72 Identities=29% Similarity=0.455 Sum_probs=65.2
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
.++.+++..++.+|..+|.|++|.|+.+||+.+|+.++ +++.++..++..+|.+++|.|+|+||+.++....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 36778999999999999999999999999999999976 5788999999999999999999999999886543
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.1e-07 Score=91.35 Aligned_cols=140 Identities=12% Similarity=0.164 Sum_probs=108.5
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE----eCCeEEEEEeecCC-C
Q 040003 140 QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE----DAVAVHVVMELCAG-G 214 (489)
Q Consensus 140 ~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~~~~lv~e~~~~-g 214 (489)
--.+.|+|+...+|..|++|++.-.+.... .....=++.++++ .|+|||.+.++|. ....+++|++|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 345789999999999999999943322221 1222346778899 7999999999886 34578999999987 5
Q ss_pred chHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 215 ELFDRIIQR---------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 215 ~L~~~l~~~---------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
+|.++.... .+.+|..+|.++.|+..||.++|+.|+.-+-|-|.+||+ +.+.+++|.-.|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv---~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV---TGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe---eCcceEEEecccce
Confidence 787765321 236788999999999999999999999999999999999 55557888888877
Q ss_pred cccCCCC
Q 040003 280 MFFRPGL 286 (489)
Q Consensus 280 ~~~~~~~ 286 (489)
-.+....
T Consensus 441 Dvl~~d~ 447 (655)
T KOG3741|consen 441 DVLQEDP 447 (655)
T ss_pred eeecCCC
Confidence 6665444
|
|
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.6e-09 Score=73.97 Aligned_cols=50 Identities=38% Similarity=0.738 Sum_probs=46.3
Q ss_pred CCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 431 GSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 431 ~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++|.|+.+||+.+|..+| ++++++..++..+|.|++|.|+|+||+.+|.+
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 479999999999998765 78999999999999999999999999999975
|
... |
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.5e-09 Score=87.26 Aligned_cols=63 Identities=19% Similarity=0.297 Sum_probs=55.9
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
....+..+|..+|.|+||+|+.+||..++ ++..+..+..+|+.+|.|+||.||++||..++.+
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 34678899999999999999999999877 5555778899999999999999999999999853
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-07 Score=97.06 Aligned_cols=170 Identities=14% Similarity=0.093 Sum_probs=124.6
Q ss_pred eeecceeccCCceEEE-EEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTF-LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy-~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
|.+ ...+-++.+ || .|..+.++..|.|.+++.... ...+...+-++-|+.| +||||+++++.++..+.+|||.
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEe
Confidence 555 334444444 34 466778889999998865432 3445677788889999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH-SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|-+. -|..++.+.+ ...+..-+.||+.||.||| ..+++|++|--+.|++ +..|.-||++|-++.....-..
T Consensus 89 ErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~ 160 (690)
T KOG1243|consen 89 ERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNA 160 (690)
T ss_pred eccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCc
Confidence 9985 5666776544 6667777899999999997 6789999999999999 7889999999988765432221
Q ss_pred --eeeeeeccC--CC---------CcchhHHHHHHHhcc
Q 040003 288 --FRVWLRLHF--LF---------FQKQRQSVLQTRLVR 313 (489)
Q Consensus 288 --~~~~~~~~y--pf---------~~~~~~~~~~~i~~~ 313 (489)
...++...| |+ +....++++.+++.|
T Consensus 161 ~~~~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 PAKSLYLIESFDDPEEIDPSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccccchhhhcccChhhcCccccchhhhhHHHHHHHHhCc
Confidence 111111122 33 334457888899888
|
|
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-08 Score=80.84 Aligned_cols=69 Identities=20% Similarity=0.347 Sum_probs=61.1
Q ss_pred HHHHHHHHHhhhcC-CC-CCCccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 344 EIAGLKEMFKMIDT-DN-SGYITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 344 ~~~~l~~~F~~~D~-d~-~g~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
....++.+|..+|. |+ +|+|+..||+.+|+. +|..+++.++..+++.+|.+++|.|+|+||+.++....
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 45678999999997 97 799999999999986 56678899999999999999999999999998886543
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.8e-08 Score=88.61 Aligned_cols=95 Identities=17% Similarity=0.015 Sum_probs=71.0
Q ss_pred CchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee--
Q 040003 214 GELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-- 290 (489)
Q Consensus 214 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-- 290 (489)
|+|.+++..+ +.+++..++.++.|++.||.|||+++ ||+|||+ +.++.+|+ ||+++..........
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~~~g~~~ 69 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQSRVDPY 69 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeeccccCCCccc
Confidence 6899999764 45999999999999999999999998 9999999 67788998 999987654322111
Q ss_pred ------eeeccC--CCCcchhHHHHHHHhcccccCCC
Q 040003 291 ------WLRLHF--LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 291 ------~~~~~y--pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+....| .-+-++.+.++.+++.|..+|..
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~ 106 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNE 106 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 111122 12234568888999988887753
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.5e-09 Score=81.83 Aligned_cols=65 Identities=18% Similarity=0.496 Sum_probs=57.5
Q ss_pred HHHHHhhcccccc--cCCCcccHHHHHHHHHH-cC--C----CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDK--DGSGYITPDELQTACQQ-FG--L----DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~--d~~G~I~~~El~~~l~~-~g--~----~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+.++.+|..||+ |++|.|+.+||..+++. +| + +..+++.|+..+|.|++|.|+|+||+.+|...
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4568889999999 89999999999999975 44 3 48899999999999999999999999998753
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.8e-08 Score=92.86 Aligned_cols=140 Identities=20% Similarity=0.277 Sum_probs=101.7
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----------------C--HHHHHHHHHHHHHHHHhcCC-C
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----------------T--EEDVEDVRREIRIMHHLAGH-P 189 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----------------~--~~~~~~~~~E~~~l~~l~~h-p 189 (489)
+.++.+||-|-=|.||.|.+. .|..+|||.=+..... + ...+....+|.++|..|..+ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999875 6889999974321100 0 12234567899999999433 3
Q ss_pred CeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC
Q 040003 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 190 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~ 269 (489)
.|.+.+++ +...+||||++|-.|... ++.......++..|+.-+.-+-..||||+|+.+=|||+ +++|
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~dg 239 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TEDG 239 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecCC
Confidence 57776654 456799999998766432 22355566666777776666668999999999999999 7788
Q ss_pred CeEEEeecccccc
Q 040003 270 PLKTIDFGLSMFF 282 (489)
Q Consensus 270 ~~kl~DFGla~~~ 282 (489)
.+.++||--+...
T Consensus 240 ~~~vIDwPQ~v~~ 252 (304)
T COG0478 240 DIVVIDWPQAVPI 252 (304)
T ss_pred CEEEEeCcccccC
Confidence 8999999655443
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=80.07 Aligned_cols=69 Identities=22% Similarity=0.321 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHHh-----CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMID-TDNSG-YITLEELKKGLQRV-----GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~l-----g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..+.++|+.+| .|++| +|+..||+.+|... ....++.+++++++.+|.|++|.|+|+||+.++..+
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45677889999999 78998 59999999999763 334577899999999999999999999999988654
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.4e-09 Score=107.50 Aligned_cols=97 Identities=16% Similarity=0.249 Sum_probs=78.4
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHH---HHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED---HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~---~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~ 456 (489)
+++.+.|..+|.|++|.+ +...+..+.. ....++ .+..+|+.+|.|++|.|+.+||..++..++ .+++++.+
T Consensus 143 ~elkeaF~lfD~dgdG~i-Lg~ilrslG~--~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~e 219 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV-VGSIFVSCSI--EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEE 219 (644)
T ss_pred HHHHHHHHHHCCCCCCcC-HHHHHHHhCC--CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHH
Confidence 567788999999999997 3333333211 112222 378999999999999999999999999887 67889999
Q ss_pred HHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 457 IIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 457 ~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+|+.+|.|++|.|+++||..+|...
T Consensus 220 aFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 220 LFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 9999999999999999999999863
|
|
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.2e-08 Score=77.86 Aligned_cols=70 Identities=24% Similarity=0.436 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhhcC-CC-CCCccHHHHHHHHHH---hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDT-DN-SGYITLEELKKGLQR---VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~-d~-~g~i~~~el~~~l~~---lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
++.+..+-.+|..+|. |+ +|+|+.+||+.+|+. +|...+++++.++++.+|.|++|.|+|+||+..+..+
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 3456677889999998 67 899999999999973 6888999999999999999999999999999888654
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-08 Score=78.97 Aligned_cols=68 Identities=24% Similarity=0.383 Sum_probs=59.4
Q ss_pred HHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-hC----CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMID-TDNSG-YITLEELKKGLQR-VG----ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 344 ~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~-lg----~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
-+..++++|+.+| .+++| .|+..||+.+|+. +| ..+++.+++.+++.+|.|++|.|+|+||+.++..+
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 4567899999997 99999 4999999999986 54 34688999999999999999999999999888654
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.9e-08 Score=77.71 Aligned_cols=70 Identities=21% Similarity=0.382 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhhhcC--CCCCCccHHHHHHHHHH-hCCC----CCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQR-VGAN----LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~--d~~g~i~~~el~~~l~~-lg~~----~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
++++..++.+|..+|. |++|+|+.+||..+++. +|.. .+..++..++..+|.+++|.|+|+||+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4577889999999999 89999999999999986 5543 358999999999999999999999999888643
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.2e-08 Score=73.95 Aligned_cols=61 Identities=28% Similarity=0.456 Sum_probs=55.6
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
+++|+.+|.|++|+|+.+||+.++..+|. +..++..+++.+|.+++|.|+|+||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 57899999999999999999999999875 78889999999999999999999999888643
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.8e-08 Score=103.63 Aligned_cols=135 Identities=24% Similarity=0.467 Sum_probs=111.8
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC--CH-----HHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL--MD-----SEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~--~~-----~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.++++.+.++.-+|+.||.+.+|+++..+|+.+|+.+|+++ .+ .++++++..+|.+.+|+|+..+|+..|...
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence 56889999999999999999999999999999999999876 23 379999999999999999999999999764
Q ss_pred h--hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHH----hcC----CCCCceeHHHHHHHHH
Q 040003 412 N--KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIRE----VDQ----DNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 412 ~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~----~d~----d~dG~I~~~eF~~~~~ 479 (489)
. ...+.+.+..||+.+|. +.-+|+++++.. .++.++++-.+.+ +|+ .-.+.+.|.+|++.+.
T Consensus 2326 ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~-----~ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2326 ETENILSSEEIEDAFRALDA-GKPYVTKEELYQ-----NLTREQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSLF 2397 (2399)
T ss_pred ccccccchHHHHHHHHHhhc-CCccccHHHHHh-----cCCHHHHHHHHHHhhhhcccccCCCccccccHHHHHHHHh
Confidence 3 33445689999999998 899999999966 4667776655444 444 2345799999998763
|
|
| >KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.72 E-value=9.4e-08 Score=92.99 Aligned_cols=134 Identities=25% Similarity=0.363 Sum_probs=102.8
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHc----cCCCCCcceehHHHHHHHHHhhhhh
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQA----GDIDNSGTMDYGEFIAAMLHLNKIQ 415 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~----~D~d~~g~I~f~eF~~~~~~~~~~~ 415 (489)
++-+.-..+.-.|-.+|.|++|.|+.++|+..- ....+..-++++|+. .-.-.+|+|+|++|+..+.......
T Consensus 272 FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~---d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~ 348 (493)
T KOG2562|consen 272 FSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYG---DHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKD 348 (493)
T ss_pred eeHHHHHHHHHHHhhhccccccccCHHHHHHHh---ccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCC
Confidence 344455555666888999999999999986643 234567788999983 3345689999999999888777666
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHc-------C---CC-HHHHHHHHHHhcCCCCCceeHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQF-------G---LD-DTQLEDIIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g---~~-~~~~~~~~~~~d~d~dG~I~~~eF~~ 476 (489)
....+...|+.+|.|++|.|+..||+.+.... | +. ++.+.+|+..+-..+.|+|+.++|+.
T Consensus 349 t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 349 TPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred CccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 77889999999999999999999998876432 3 22 34455666666667789999999997
|
|
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.8e-08 Score=69.23 Aligned_cols=51 Identities=35% Similarity=0.645 Sum_probs=48.0
Q ss_pred CCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 359 NSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 359 ~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
++|+|+.+||+.+|..+|.. .++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999888999 9999999999999999999999999998875
|
... |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2e-08 Score=101.52 Aligned_cols=97 Identities=27% Similarity=0.356 Sum_probs=87.5
Q ss_pred HHhcCCCCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-eecCCCCCCE
Q 040003 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGV-MHRDLKPENF 260 (489)
Q Consensus 183 ~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-iHrDlKp~Ni 260 (489)
+.+ .|.|+.+++|.+.++...++|.+||..|+|.|.+... ..++..-...+++.|+.|+.|||.-.| .|+-|++.|+
T Consensus 2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 456 7999999999999999999999999999999999763 467777888899999999999998776 9999999999
Q ss_pred eeeeCCCCCCeEEEeeccccccC
Q 040003 261 LFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 261 ll~~~~~~~~~kl~DFGla~~~~ 283 (489)
++ +....+||.|||+.....
T Consensus 81 lv---d~~w~lklt~~Gl~~~~~ 100 (484)
T KOG1023|consen 81 LV---DSRWVLKLTDFGLNSLLE 100 (484)
T ss_pred ee---eeeEEEEechhhhccccc
Confidence 99 788999999999988774
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-07 Score=74.14 Aligned_cols=70 Identities=20% Similarity=0.315 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhh-hcCCCCC-CccHHHHHHHHHHh-----CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKM-IDTDNSG-YITLEELKKGLQRV-----GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~-~D~d~~g-~i~~~el~~~l~~l-----g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
+..+..|..+|+. +|.+++| +|+.+||+.++... +....+.+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999 8888876 99999999999876 334567899999999999999999999999888654
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.5e-08 Score=69.71 Aligned_cols=59 Identities=47% Similarity=0.943 Sum_probs=53.9
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+..+|+.+|.|++|.|+.+|+..++..++ .+.+.+..+++.+|.+++|.|+|+||+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 45789999999999999999999999887 578889999999999999999999999875
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 489 | ||||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 3e-60 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 8e-57 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 5e-30 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 6e-30 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 2e-28 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 3e-17 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 7e-27 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 9e-14 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 3e-26 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-26 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-26 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-26 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-26 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 1e-25 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 2e-25 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-24 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 4e-17 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 4e-24 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-23 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 9e-13 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-23 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 9e-13 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-23 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 9e-13 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-23 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-11 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 3e-23 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 4e-23 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 4e-18 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 1e-22 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 1e-22 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 1e-22 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 1e-22 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 2e-22 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 2e-22 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 2e-22 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 2e-22 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 2e-22 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 2e-22 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 2e-22 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 2e-22 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 2e-22 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 2e-22 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 2e-22 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 2e-22 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 3e-22 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 3e-22 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 3e-22 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-22 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 3e-22 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 3e-22 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 4e-22 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 4e-22 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 4e-22 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 4e-22 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 4e-22 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 5e-22 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 5e-22 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 5e-22 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 7e-22 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 7e-22 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 7e-22 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 8e-22 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 9e-22 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 1e-21 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 1e-21 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 1e-21 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 1e-21 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 1e-21 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 1e-21 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 1e-21 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 1e-21 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 1e-21 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 1e-21 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 1e-21 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 1e-21 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 1e-21 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 2e-21 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-21 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 2e-21 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 2e-21 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 2e-21 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 2e-21 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 4e-21 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 4e-21 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 5e-21 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 7e-21 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 1e-20 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 1e-20 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 1e-20 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 1e-20 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 2e-20 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 2e-20 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 2e-20 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-20 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 2e-20 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 3e-20 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 3e-20 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 3e-20 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 4e-20 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 9e-20 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 1e-19 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 2e-19 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 3e-19 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 3e-19 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 3e-19 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-19 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 3e-19 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-19 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 4e-19 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 4e-19 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 4e-19 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 4e-19 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 5e-19 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 6e-19 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 7e-19 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 8e-19 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 8e-19 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 8e-19 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 8e-19 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 2e-18 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 2e-04 | ||
| 3ekj_A | 449 | Calcium-Free Gcamp2 (Calcium Binding Deficient Muta | 3e-18 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 4e-18 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-18 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 5e-18 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 6e-18 | ||
| 2lmt_A | 148 | Nmr Structure Of Androcam Length = 148 | 8e-18 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-17 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 2e-17 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 2e-17 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 2e-17 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 2e-17 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 2e-17 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-17 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 2e-17 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 3e-17 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 3e-17 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 4e-17 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 4e-17 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 4e-17 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 4e-17 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 5e-17 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 5e-17 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 5e-17 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 6e-17 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 6e-17 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 6e-17 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 7e-17 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 7e-17 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 7e-17 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 7e-17 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 7e-17 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 7e-17 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 7e-17 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 7e-17 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 7e-17 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 8e-17 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 8e-17 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 8e-17 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 9e-17 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-17 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-17 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 9e-17 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 9e-17 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 1e-16 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 1e-16 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 1e-16 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 1e-16 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 2e-16 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 2e-16 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-16 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 2e-16 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-16 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-16 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 3e-16 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 3e-16 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 4e-16 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 4e-16 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 5e-16 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 5e-16 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 5e-16 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 5e-16 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 5e-16 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 5e-16 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 5e-16 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 5e-16 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 6e-16 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 6e-16 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 6e-16 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 7e-16 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 1e-15 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 1e-15 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 1e-15 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-15 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-15 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-15 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-15 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-15 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-15 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 2e-15 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-15 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 2e-15 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 2e-15 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-15 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-15 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 3e-15 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 3e-15 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 3e-15 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 3e-15 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 3e-15 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 3e-15 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 3e-15 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-15 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-15 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-15 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-15 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 8e-15 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 9e-15 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 9e-15 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-15 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 1e-14 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 2e-14 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-14 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-14 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 8e-14 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 8e-14 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-14 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-14 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 9e-14 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 9e-14 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 9e-14 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 9e-14 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 9e-14 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-13 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 1e-13 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 1e-13 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 1e-13 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 1e-13 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-13 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 1e-13 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 1e-13 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-13 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 1e-13 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 1e-13 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-13 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 1e-13 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 1e-13 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-13 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 1e-13 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 1e-13 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-13 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-13 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 1e-13 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 1e-13 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 1e-13 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 1e-13 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 1e-13 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 1e-13 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-13 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 1e-13 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 1e-13 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 1e-13 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 1e-13 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 1e-13 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 1e-13 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-13 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-13 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 2e-13 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 3e-13 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 3e-13 | ||
| 2obh_A | 143 | Centrin-Xpc Peptide Length = 143 | 4e-13 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-13 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 7e-13 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 7e-13 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 9e-13 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 9e-13 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 1e-12 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 1e-12 | ||
| 1la0_A | 161 | Solution Structure Of Calcium Saturated Cardiac Tro | 1e-12 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 1e-12 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 1e-12 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 1e-12 | ||
| 1aj4_A | 161 | Structure Of Calcium-Saturated Cardiac Troponin C, | 1e-12 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 1e-12 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 1e-12 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 9e-07 | ||
| 2lan_A | 167 | Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc | 1e-12 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 1e-12 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 1e-12 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-12 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-12 | ||
| 2jt0_A | 161 | Solution Structure Of F104w Cardiac Troponin C Leng | 2e-12 | ||
| 2jt3_A | 161 | Solution Structure Of F153w Cardiac Troponin C Leng | 2e-12 | ||
| 1dtl_A | 161 | Crystal Structure Of Calcium-Saturated (3ca2+) Card | 2e-12 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 2e-12 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 2e-12 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 2e-12 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 2e-12 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 2e-12 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 2e-12 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-12 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 2e-12 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-12 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 2e-12 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-12 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-12 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 2e-12 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-12 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 3e-12 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-12 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 3e-12 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 3e-12 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 3e-12 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 3e-12 | ||
| 3ox5_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 3e-12 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 3e-12 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 3e-12 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 3e-12 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 3e-12 | ||
| 3ox6_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 3e-12 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 4e-12 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 4e-12 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 4e-12 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 5e-12 | ||
| 2jtz_A | 161 | Solution Structure And Chemical Shift Assignments O | 5e-12 | ||
| 2jt8_A | 161 | Solution Structure Of The F153-To-5-Flurotryptophan | 5e-12 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 6e-12 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 7e-12 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 7e-12 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 8e-12 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 8e-12 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 1e-11 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-11 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 1e-11 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 1e-11 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-11 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-11 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 1e-11 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 1e-11 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 1e-11 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 1e-11 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 1e-11 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 1e-11 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 1e-11 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 1e-11 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 2e-11 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 2e-11 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-11 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 2e-11 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-11 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 2e-11 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-11 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 3e-11 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 3e-11 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 4e-11 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 4e-11 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 5e-11 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 6e-11 | ||
| 3fwb_A | 161 | Sac3:sus1:cdc31 Complex Length = 161 | 1e-10 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 1e-10 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 3e-10 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 3e-10 | ||
| 1tco_B | 169 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 3e-10 | ||
| 1mf8_B | 170 | Crystal Structure Of Human Calcineurin Complexed Wi | 3e-10 | ||
| 2p6b_B | 156 | Crystal Structure Of Human Calcineurin In Complex W | 4e-10 | ||
| 3ll8_B | 155 | Crystal Structure Of Calcineurin In Complex With Ak | 4e-10 | ||
| 3e3r_A | 204 | Crystal Structure And Biochemical Characterization | 5e-10 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 6e-10 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 7e-10 | ||
| 3j04_B | 143 | Em Structure Of The Heavy Meromyosin Subfragment Of | 7e-10 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 8e-10 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 8e-10 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 8e-10 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 9e-10 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 9e-10 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 9e-10 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 9e-10 | ||
| 2bl0_B | 145 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 1e-09 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 1e-09 | ||
| 2ggm_A | 172 | Human Centrin 2 Xeroderma Pigmentosum Group C Prote | 2e-09 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 2e-09 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 3e-09 | ||
| 2bl0_C | 142 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 3e-09 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-09 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 3e-09 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 4e-09 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 5e-09 | ||
| 2gv5_A | 161 | Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 1 | 5e-09 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 5e-09 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-09 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 5e-09 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 5e-09 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-09 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 5e-09 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 5e-09 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 5e-09 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 5e-09 | ||
| 2i08_A | 78 | Solvation Effect In Conformational Changes Of Ef-Ha | 5e-09 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 5e-09 | ||
| 1sw8_A | 79 | Solution Structure Of The N-Terminal Domain Of Huma | 5e-09 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 5e-09 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-09 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-09 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 5e-09 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 5e-09 | ||
| 1f71_A | 67 | Refined Solution Structure Of Calmodulin C-Terminal | 6e-09 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 6e-09 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 6e-09 | ||
| 1yru_B | 74 | Crystal Structure Analysis Of The Adenylyl Cyclaes | 7e-09 | ||
| 1zot_B | 69 | Crystal Structure Analysis Of The CyaaC-Cam With Pm | 8e-09 | ||
| 1cmf_A | 73 | Nmr Solution Structure Of Apo Calmodulin Carboxy-Te | 8e-09 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 9e-09 | ||
| 2col_B | 67 | Crystal Structure Analysis Of CyaaC-Cam With Pyroph | 1e-08 | ||
| 1fw4_A | 71 | Crystal Structure Of E. Coli Fragment Tr2c From Cal | 1e-08 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 1e-08 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 1e-08 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 1e-08 | ||
| 1j7o_A | 76 | Solution Structure Of Calcium-calmodulin N-terminal | 1e-08 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 1e-08 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 1e-08 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 1e-08 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 1e-08 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 1e-08 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 1e-08 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-08 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-08 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-08 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 2e-08 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 2e-08 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 2e-08 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 2e-08 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 2e-08 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 2e-08 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 2e-08 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 2e-08 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 2e-08 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 2e-08 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 2e-08 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 2e-08 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 2e-08 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 2e-08 | ||
| 3ifk_A | 90 | Crystal Structure Of Calcium-Saturated Calmodulin N | 2e-08 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 2e-08 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 2e-08 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-08 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-08 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-08 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 3e-08 | ||
| 3i5g_B | 153 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 3e-08 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-08 | ||
| 2kn2_A | 92 | Solution Structure Of The C-Terminal Domain Of Soyb | 3e-08 | ||
| 1ih0_A | 71 | Structure Of The C-Domain Of Human Cardiac Troponin | 3e-08 | ||
| 1ih0_A | 71 | Structure Of The C-Domain Of Human Cardiac Troponin | 7e-06 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 4e-08 | ||
| 1ozs_A | 73 | C-Domain Of Human Cardiac Troponin C In Complex Wit | 4e-08 | ||
| 1ozs_A | 73 | C-Domain Of Human Cardiac Troponin C In Complex Wit | 5e-06 | ||
| 2rob_A | 70 | Solution Structure Of Calcium Bound Soybean Calmodu | 4e-08 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-08 | ||
| 3mse_B | 180 | Crystal Structure Of C-Terminal Domain Of Pf110239 | 5e-08 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 5e-08 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 5e-08 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-08 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-08 | ||
| 2kxw_A | 73 | Structure Of The C-Domain Fragment Of Apo Calmoduli | 6e-08 | ||
| 1fi5_A | 81 | Nmr Structure Of The C Terminal Domain Of Cardiac T | 6e-08 | ||
| 1fi5_A | 81 | Nmr Structure Of The C Terminal Domain Of Cardiac T | 4e-06 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 7e-08 | ||
| 3ctn_A | 76 | Structure Of Calcium-Saturated Cardiac Troponin C, | 7e-08 | ||
| 3ctn_A | 76 | Structure Of Calcium-Saturated Cardiac Troponin C, | 8e-06 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 8e-08 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 8e-08 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-08 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 9e-08 | ||
| 2ro9_A | 69 | Solution Structure Of Calcium Bound Soybean Calmodu | 1e-07 | ||
| 2ro9_A | 69 | Solution Structure Of Calcium Bound Soybean Calmodu | 2e-07 | ||
| 2ro8_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 1e-07 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-07 | ||
| 2kz2_A | 94 | Calmodulin, C-Terminal Domain, F92e Mutant Length = | 1e-07 | ||
| 2rrt_A | 72 | Solution Structure Of Magnesium-Bound Form Of Calmo | 1e-07 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 1e-07 | ||
| 2b1u_A | 71 | Solution Structure Of Calmodulin-Like Skin Protein | 1e-07 | ||
| 2kdh_A | 72 | The Solution Structure Of Human Cardiac Troponin C | 1e-07 | ||
| 2kdh_A | 72 | The Solution Structure Of Human Cardiac Troponin C | 2e-06 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-07 | ||
| 2lv7_A | 100 | Solution Structure Of Ca2+-Bound Cabp7 N-Terminal D | 1e-07 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 2e-07 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 2e-07 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 2e-07 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 2e-07 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 2e-07 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-07 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 2e-07 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 2e-07 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 2e-07 | ||
| 2bec_A | 202 | Crystal Structure Of Chp2 In Complex With Its Bindi | 2e-07 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 3e-07 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 3e-07 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 4e-07 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 4e-07 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 4e-07 | ||
| 1f54_A | 77 | Solution Structure Of The Apo N-Terminal Domain Of | 4e-07 | ||
| 1f54_A | 77 | Solution Structure Of The Apo N-Terminal Domain Of | 8e-07 | ||
| 1trf_A | 76 | Solution Structure Of The Tr1c Fragment Of Skeletal | 6e-07 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 7e-07 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 8e-07 | ||
| 1avs_A | 90 | X-Ray Crystallographic Study Of Calcium-Saturated N | 8e-07 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 1e-06 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 1e-06 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-06 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-06 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 1e-06 | ||
| 2ksz_A | 76 | The Solution Structure Of The Magnesium Bound Soybe | 1e-06 | ||
| 2ksz_A | 76 | The Solution Structure Of The Magnesium Bound Soybe | 2e-06 | ||
| 2roa_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 1e-06 | ||
| 2roa_A | 79 | Solution Structure Of Calcium Bound Soybean Calmodu | 3e-06 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 1e-06 | ||
| 2ami_A | 96 | Solution Structure Of The Calcium-Loaded N-Terminal | 2e-06 | ||
| 1npq_A | 90 | Structure Of A Rhodamine-Labeled N-Domain Troponin | 2e-06 | ||
| 1npq_A | 90 | Structure Of A Rhodamine-Labeled N-Domain Troponin | 2e-06 | ||
| 2jnf_A | 158 | Solution Structure Of Fly Troponin C, Isoform F1 Le | 2e-06 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 2e-06 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 3e-06 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 3e-06 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 3e-06 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-06 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-06 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 3e-06 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 3e-06 | ||
| 1bjf_A | 193 | Crystal Structure Of Recombinant Bovine Neurocalcin | 3e-06 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-06 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 3e-06 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 3e-06 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-06 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 3e-06 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 3e-06 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 3e-06 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 3e-06 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 3e-06 | ||
| 1m39_A | 89 | Solution Structure Of The C-Terminal Fragment (F86- | 3e-06 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 3e-06 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-06 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 3e-06 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 3e-06 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 3e-06 | ||
| 1smg_A | 90 | Calcium-Bound E41a Mutant Of The N-Domain Of Chicke | 4e-06 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-06 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 4e-06 | ||
| 4hni_A | 296 | Crystal Structure Of Ck1e In Complex With Pf4800567 | 6e-06 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 6e-06 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 7e-06 | ||
| 2k7c_A | 72 | Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length = | 7e-06 | ||
| 3uys_A | 296 | Crystal Structure Of Apo Human Ck1d Length = 296 | 7e-06 | ||
| 3tz1_A | 74 | Crystal Structure Of The Ca2+-saturated C-terminal | 7e-06 | ||
| 1ckj_A | 317 | Casein Kinase I Delta Truncation Mutant Containing | 8e-06 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 9e-06 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 1e-05 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 1e-05 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 1e-05 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-05 | ||
| 5pal_A | 109 | Crystal Structure Of The Unique Parvalbumin Compone | 1e-05 | ||
| 5pal_A | 109 | Crystal Structure Of The Unique Parvalbumin Compone | 9e-04 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 1e-05 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 1e-05 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 1e-05 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 1e-05 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 1e-05 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 1e-05 | ||
| 1jc2_A | 76 | Complex Of The C-Domain Of Troponin C With Residues | 1e-05 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-05 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 2e-05 | ||
| 1kfx_S | 184 | Crystal Structure Of Human M-Calpain Form I Length | 2e-05 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-05 | ||
| 3aaj_A | 167 | Crystal Structure Of Ca2+-Bound Form Of Des3-23alg- | 2e-05 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-05 | ||
| 1hqv_A | 191 | Structure Of Apoptosis-Linked Protein Alg-2 Length | 2e-05 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 2e-05 | ||
| 2zn9_A | 172 | Crystal Structure Of Ca2+-bound Form Of Des3-20alg- | 2e-05 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 3e-05 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 3e-05 | ||
| 2zne_A | 169 | Crystal Structure Of Zn2+-Bound Form Of Des3-23alg- | 3e-05 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 3e-05 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 3e-05 | ||
| 2zn8_A | 190 | Crystal Structure Of Zn2+-Bound Form Of Alg-2 Lengt | 3e-05 | ||
| 1oqp_A | 77 | Structure Of The Ca2+C-Terminal Domain Of Caltracti | 3e-05 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 3e-05 | ||
| 2zrs_A | 168 | Crystal Structure Of Ca2+-Bound Form Of Des3-23alg- | 3e-05 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 3e-05 | ||
| 2ggz_A | 211 | Crystal Structure Of Human Guanylate Cyclase Activa | 3e-05 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 3e-05 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 3e-05 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 4e-05 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-05 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 4e-05 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-05 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 4e-05 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-05 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 4e-05 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 4e-05 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 4e-05 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 4e-05 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 4e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 4e-05 | ||
| 2jnx_A | 134 | Nmr Derived Solution Structure Of An Ef-Hand Calciu | 4e-05 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 4e-05 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 4e-05 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 4e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 5e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 5e-05 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 5e-05 | ||
| 2lc5_A | 85 | Calmodulin-Like Protein From Entamoeba Histolytica: | 5e-05 | ||
| 2lc5_A | 85 | Calmodulin-Like Protein From Entamoeba Histolytica: | 7e-04 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 5e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 5e-05 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 5e-05 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 5e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 5e-05 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 5e-05 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 5e-05 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 5e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 5e-05 | ||
| 1wdc_B | 156 | Scallop Myosin Regulatory Domain Length = 156 | 5e-05 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 5e-05 | ||
| 2hf5_A | 68 | The Structure And Function Of A Novel Two-Site Calc | 6e-05 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 6e-05 | ||
| 1scm_B | 145 | Structure Of The Regulatory Domain Of Scallop Myosi | 6e-05 | ||
| 2csn_A | 297 | Binary Complex Of Casein Kinase-1 With Cki7 Length | 7e-05 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-05 | ||
| 1eh4_A | 298 | Binary Complex Of Casein Kinase-1 From S. Pombe Wit | 7e-05 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 8e-05 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 1e-04 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-04 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 1e-04 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-04 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 1e-04 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-04 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 1e-04 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-04 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-04 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-04 | ||
| 1c7v_A | 81 | Nmr Solution Structure Of The Calcium-Bound C-Termi | 1e-04 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 1e-04 | ||
| 2ehb_A | 207 | The Structure Of The C-Terminal Domain Of The Prote | 1e-04 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-04 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-04 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-04 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 2e-04 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 2e-04 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-04 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-04 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-04 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-04 | ||
| 1zmz_A | 98 | Solution Structure Of The N-Terminal Domain (M1-S98 | 2e-04 | ||
| 1zmz_A | 98 | Solution Structure Of The N-Terminal Domain (M1-S98 | 7e-04 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 2e-04 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 2e-04 | ||
| 1omd_A | 108 | Structure Of Oncomodulin Refined At 1.85 Angstroms | 2e-04 | ||
| 1v1f_A | 222 | Structure Of The Arabidopsis Thaliana Sos3 Complexe | 2e-04 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 2e-04 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-04 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-04 | ||
| 2os8_B | 157 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 2e-04 | ||
| 2a4j_A | 79 | Solution Structure Of The C-Terminal Domain (T94-Y1 | 2e-04 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 2e-04 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 2e-04 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 2e-04 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 2e-04 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 2e-04 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-04 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 2e-04 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 2e-04 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 2e-04 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 2e-04 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 2e-04 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 2e-04 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-04 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 2e-04 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-04 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 3e-04 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 3e-04 | ||
| 1aj5_A | 173 | Calpain Domain Vi Apo Length = 173 | 3e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-04 | ||
| 2kyc_A | 108 | Solution Structure Of Ca-Free Chicken Parvalbumin 3 | 3e-04 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 3e-04 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 3e-04 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 3e-04 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 3e-04 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 3e-04 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-04 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 3e-04 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 3e-04 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 3e-04 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 3e-04 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 3e-04 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 3e-04 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-04 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 3e-04 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-04 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 3e-04 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-04 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 3e-04 | ||
| 1df0_B | 184 | Crystal Structure Of M-Calpain Length = 184 | 3e-04 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-04 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-04 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-04 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 3e-04 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 3e-04 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 3e-04 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-04 | ||
| 1ttx_A | 109 | Solution Stucture Of Human Beta Parvalbumin (Oncomo | 3e-04 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 3e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-04 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-04 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 4e-04 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 4e-04 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-04 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 4e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 4e-04 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 4e-04 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 4e-04 | ||
| 1dfk_Y | 139 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 4e-04 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 4e-04 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 4e-04 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 4e-04 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 4e-04 | ||
| 1dvi_A | 184 | Calpain Domain Vi With Calcium Bound Length = 184 | 4e-04 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 4e-04 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 4e-04 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 4e-04 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-04 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 4e-04 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 4e-04 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 4e-04 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 4e-04 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-04 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 4e-04 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 4e-04 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 4e-04 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 4e-04 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 4e-04 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 4e-04 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-04 | ||
| 2fce_A | 70 | Solution Structure Of C-Lobe Myosin Light Chain Fro | 4e-04 | ||
| 1qxp_A | 900 | Crystal Structure Of A Mu-Like Calpain Length = 900 | 4e-04 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 4e-04 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 4e-04 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 4e-04 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 4e-04 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 4e-04 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 4e-04 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 4e-04 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-04 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-04 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 4e-04 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-04 | ||
| 2ec6_B | 133 | Placopecten Striated Muscle Myosin Ii Length = 133 | 4e-04 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 4e-04 | ||
| 3pat_A | 110 | Comparison Between The Crystal And The Solution Str | 4e-04 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 4e-04 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 4e-04 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-04 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 4e-04 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 4e-04 | ||
| 1a75_B | 109 | Whiting Parvalbumin Length = 109 | 5e-04 | ||
| 1a75_B | 109 | Whiting Parvalbumin Length = 109 | 7e-04 | ||
| 1a75_A | 108 | Whiting Parvalbumin Length = 108 | 5e-04 | ||
| 1a75_A | 108 | Whiting Parvalbumin Length = 108 | 7e-04 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 5e-04 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 5e-04 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 5e-04 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 5e-04 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 5e-04 | ||
| 1m46_A | 148 | Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A | 5e-04 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 6e-04 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 6e-04 | ||
| 1alw_A | 173 | Inhibitor And Calcium Bound Domain Vi Of Porcine Ca | 6e-04 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 6e-04 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 6e-04 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 6e-04 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 6e-04 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 6e-04 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 6e-04 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 6e-04 | ||
| 1kk8_B | 139 | Scallop Myosin (S1-Adp-Befx) In The Actin-Detached | 7e-04 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 7e-04 | ||
| 1cdp_A | 109 | Restrained Least Squares Refinement Of Native (Calc | 7e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 8e-04 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 8e-04 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 8e-04 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 9e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 9e-04 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 9e-04 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 9e-04 |
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C In The Troponin C-Troponin I Complex Length = 161 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1 Structure Length = 161 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac Troponin C Complexed With The Calcium Sensitizer Bepridil At 2.15 A Resolution Length = 161 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant Of Human Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex Length = 161 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169 | Back alignment and structure |
|
| >pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170 | Back alignment and structure |
|
| >pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156 | Back alignment and structure |
|
| >pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155 | Back alignment and structure |
|
| >pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of Recombinant Human Calcyphosine Delineates A Novel Ef-hand-containing Protein Family Length = 204 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 143 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 145 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein Complex Length = 172 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 142 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 161 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand Proteins: X-Ray Structure Of Ca2+-Saturated Double Mutant Q41l-K75i Of N-Domain Of Calmodulin Length = 78 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain Length = 67 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis In Presence Of C-Terminal Calmodulin And 1mm Calcium Chloride Length = 74 | Back alignment and structure |
|
| >pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp Length = 69 | Back alignment and structure |
|
| >pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal Domain Length = 73 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate Length = 67 | Back alignment and structure |
|
| >pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin To 1.7 A Resolution Length = 71 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 153 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean Calmodulin Isoform 4 Fused With The Calmodulin-Binding Domain Of Ntmkp1 Length = 92 | Back alignment and structure |
|
| >pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In Complex With Ca2+ Sensitizer Emd 57033 Length = 71 | Back alignment and structure |
|
| >pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In Complex With Ca2+ Sensitizer Emd 57033 Length = 71 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The Inhibitory Region Of Human Cardiac Troponin I Length = 73 | Back alignment and structure |
|
| >pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The Inhibitory Region Of Human Cardiac Troponin I Length = 73 | Back alignment and structure |
|
| >pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain Length = 70 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound To The Iq Motif Of Nav1.2 Length = 73 | Back alignment and structure |
|
| >pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin C Bound To The N Terminal Domain Of Cardiac Troponin I. Length = 81 | Back alignment and structure |
|
| >pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin C Bound To The N Terminal Domain Of Cardiac Troponin I. Length = 81 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30 Structures Length = 76 | Back alignment and structure |
|
| >pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30 Structures Length = 76 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 C-Terminal Domain Length = 69 | Back alignment and structure |
|
| >pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 C-Terminal Domain Length = 69 | Back alignment and structure |
|
| >pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 1 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant Length = 94 | Back alignment and structure |
|
| >pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin C-Domain E104dE140D MUTANT Length = 72 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C Terminal Domain Length = 71 | Back alignment and structure |
|
| >pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In Complex With The Green Tea Polyphenol; (-)- Epigallocatechin-3-Gallate Length = 72 | Back alignment and structure |
|
| >pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In Complex With The Green Tea Polyphenol; (-)- Epigallocatechin-3-Gallate Length = 72 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman Length = 100 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding Region In Nhe1 And Insights Into The Mechanism Of Ph Regulation Length = 202 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77 | Back alignment and structure |
|
| >pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77 | Back alignment and structure |
|
| >pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle Troponin-C Length = 76 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N- Terminal Domain Of Troponin C Length = 90 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean Calmod Isoform 4 N-Domain Length = 76 | Back alignment and structure |
|
| >pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean Calmod Isoform 4 N-Domain Length = 76 | Back alignment and structure |
|
| >pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 N-Terminal Domain Length = 79 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor Domain Of Centrin Length = 96 | Back alignment and structure |
|
| >pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C Mutant (Ca2+ Saturated) In Complex With Skeletal Troponin I 115- 131 Length = 90 | Back alignment and structure |
|
| >pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C Mutant (Ca2+ Saturated) In Complex With Skeletal Troponin I 115- 131 Length = 90 | Back alignment and structure |
|
| >pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1 Length = 158 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta At 2.4 Angstroms Length = 193 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165) Of The Human Centrin 2 In Calcium Saturated Form Length = 89 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken Troponin C, Nmr, 40 Structures Length = 90 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length = 72 | Back alignment and structure |
|
| >pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296 | Back alignment and structure |
|
| >pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain Of Akazara Scallop Troponin C In Complex With A Troponin I Fragment Length = 74 | Back alignment and structure |
|
| >pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From Muscle Of The Leopard Shark (Triakis Semifasciata). The First X-Ray Study Of An Alpha-Parvalbumin Length = 109 | Back alignment and structure |
|
| >pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From Muscle Of The Leopard Shark (Triakis Semifasciata). The First X-Ray Study Of An Alpha-Parvalbumin Length = 109 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40 Of Troponin I Length = 76 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I Length = 184 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2deltagf122 Length = 167 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2 Length = 191 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2 Length = 172 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2 Complexed With Alix Abs Peptide Length = 169 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2 Length = 190 | Back alignment and structure |
|
| >pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In Complex With The Cdc31p-Binding Domain From Kar1p Length = 77 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2 Length = 168 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating Protein-3 Length = 211 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure And Calcium-Binding Properties Of A Partially Folded Protein Length = 85 | Back alignment and structure |
|
| >pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure And Calcium-Binding Properties Of A Partially Folded Protein Length = 85 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain Length = 156 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium- Binding Fragment Of Calmodulin Length = 68 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At 2.8 Angstroms Resolution Length = 145 | Back alignment and structure |
|
| >pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal Domain (W81-S161) Of Calcium Vector Protein From Amphioxus Length = 81 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein Kinase Atsos2 Bound To The Calcium Sensor Atsos3 Length = 207 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of Human Centrin 2 Length = 98 | Back alignment and structure |
|
| >pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of Human Centrin 2 Length = 98 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms Resolution. An Example Of Extensive Molecular Aggregation Via Ca2+ Length = 108 | Back alignment and structure |
|
| >pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With Calcium(Ii) And Manganese(Ii) Ions Length = 222 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 157 | Back alignment and structure |
|
| >pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of The Human Centrin 2 In Complex With A 17 Residues Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C Protein Length = 79 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1AJ5|A Chain A, Calpain Domain Vi Apo Length = 173 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3) Length = 108 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain Length = 184 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin) Refined With A Paramagnetism Based Strategy Length = 109 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 139 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound Length = 184 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From Saccharomices Cerevisiae Length = 70 | Back alignment and structure |
|
| >pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain Length = 900 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii Length = 133 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures Of The Ef Hand Parvalbumin Length = 110 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|1A75|B Chain B, Whiting Parvalbumin Length = 109 | Back alignment and structure |
|
| >pdb|1A75|B Chain B, Whiting Parvalbumin Length = 109 | Back alignment and structure |
|
| >pdb|1A75|A Chain A, Whiting Parvalbumin Length = 108 | Back alignment and structure |
|
| >pdb|1A75|A Chain A, Whiting Parvalbumin Length = 108 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class V Myosin Length = 148 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain Length = 173 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached Conformation Length = 139 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium) And Cadmium-Substituted Carp Parvalbumin Using X-Ray Crystallographic Data At 1.6-Angstroms Resolution Length = 109 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 299 bits (768), Expect = 2e-98
Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 13/258 (5%)
Query: 38 KNEPSDNTERSLKAKDQSKASDTAPAPA-PTPTPIQSTPPPPVKINNNRQPPAPVPQQQQ 96
+ DN + + + + I+S P + N ++
Sbjct: 7 HSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEA----KKLN 62
Query: 97 EQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEF 156
+ K S G + + Y +G+G CV +AT EF
Sbjct: 63 DAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEF 122
Query: 157 ACKSIAKRKLTT-----EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211
A K + EE E RRE I+ +AGHP++I ++ +YE + + +V +L
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 212 AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
GELFD + ++ +E++ + R ++ V H+ ++HRDLKPEN L + +
Sbjct: 183 RKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQI 239
Query: 272 KTIDFGLSMFFRPGLTFR 289
+ DFG S PG R
Sbjct: 240 RLSDFGFSCHLEPGEKLR 257
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 292 bits (750), Expect = 3e-96
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSL-GRKLGQGQFGTTFLCVEKATQKEFACKSIA 162
H S L ++ + N Y L ++LG+G+F C+ K+T +E+A K +
Sbjct: 4 HHHHSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLK 63
Query: 163 KRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ 222
KR+ ++ ++ EI ++ P VI + YE+ + +++E AGGE+F +
Sbjct: 64 KRRRG-QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLP 122
Query: 223 R--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+E L + I+ V H ++H DLKP+N L + +K +DFG+S
Sbjct: 123 ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
Query: 281 FFRPGLTFRV 290
R
Sbjct: 183 KIGHACELRE 192
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 293 bits (751), Expect = 5e-94
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 94 QQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQ 153
+ G + +K G + E Y RKLG G +G LC EK
Sbjct: 2 HHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGH 61
Query: 154 KEFACKSIAKRKLTT----------EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203
E A K I K + E+ E++ EI ++ L HPN+I++ +ED
Sbjct: 62 SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKKY 120
Query: 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263
++V E GGELF++II R + E AA++ + I+ + H ++HRD+KPEN L
Sbjct: 121 FYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLE 180
Query: 264 NQQEEAPLKTIDFGLSMFFRPGLTFR 289
N+ +K +DFGLS FF R
Sbjct: 181 NKNSLLNIKIVDFGLSSFFSKDYKLR 206
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 218 bits (556), Expect = 3e-65
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 334 RVIAESLSE-EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA--------NLMDSEI 384
I L+ EE L ++FK +D + G + +EL +G + ++ E+
Sbjct: 342 LFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEV 401
Query: 385 DGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTAC 444
D +++ D D +G ++Y EFI+ + + E+ + AF+ FD D SG IT +EL
Sbjct: 402 DNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF 461
Query: 445 QQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + D++ E DQ+ D ID+ EFV+MM
Sbjct: 462 GLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMH 496
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 291 bits (748), Expect = 9e-94
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDV 175
G + T + Y R LG+G FG LC +K T +E A K I+KR++ + D E +
Sbjct: 14 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 176 RREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
RE++++ L HPN++++ +ED ++V E+ GGELFD II R ++E AA +
Sbjct: 74 LREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
R ++ + H ++HRDLKPEN L ++ ++A ++ IDFGLS F +
Sbjct: 133 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 186
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 216 bits (553), Expect = 6e-65
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 334 RVIAESL-SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----------GANLMD 381
+ L S++E L +F +D + G + EL +G + + A+ ++
Sbjct: 322 LYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVE 381
Query: 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
E+D ++ A D D +G ++Y EF+ + + + + AF FD D SG I+ EL
Sbjct: 382 HEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELA 441
Query: 442 TACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
T +D + ++ EVD++NDG +D+ EF M+
Sbjct: 442 TIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 6e-11
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
L+ F+M D+DNSG I+ EL + ++ D +N G +D+ EF
Sbjct: 420 LERAFRMFDSDNSGKISSTELATIFGVSDVD--SETWKSVLSEVDKNNDGEVDFDEFQQM 477
Query: 408 MLHLN 412
+L L
Sbjct: 478 LLKLC 482
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 287 bits (737), Expect = 1e-93
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 109 SSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT 168
+ + + + Y + +LG+G F CV K T EFA K I +KL+
Sbjct: 10 GQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA 69
Query: 169 EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTE 228
D + + RE RI L HPN++++ + ++ ++V +L GGELF+ I+ R Y+E
Sbjct: 70 R-DFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 229 RKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
A+ + I+ + CHS G++HR+LKPEN L ++ + A +K DFGL++ +
Sbjct: 128 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187
Query: 289 R 289
Sbjct: 188 H 188
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 286 bits (733), Expect = 1e-93
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE---DV 172
G+V + N+ + Y G +LG GQF C EK+T ++A K I KR+ +
Sbjct: 1 GTVF--RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSR 58
Query: 173 EDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
ED+ RE+ I+ + HPNVI + YE+ V +++EL AGGELFD + ++ TE +A
Sbjct: 59 EDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFRV 290
+ + I+ V HSL + H DLKPEN + +++ P +K IDFGL+ G F+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 284 bits (728), Expect = 2e-93
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIM 182
+ + Y + +LG+G F CV K T EFA K I +KL+ D + + RE RI
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARIC 59
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
L HPN++++ + ++ ++V +L GGELF+ I+ R Y+E A+ + I+ +
Sbjct: 60 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
CHS G++HR+LKPEN L ++ + A +K DFGL++ +
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 283 bits (727), Expect = 3e-93
Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 2/168 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI 181
G E Y++ LG+G FG C ++ TQ+E+A K I K + D + RE+ +
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVEL 74
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ L HPN++++ ED+ + ++V EL GGELFD II+R ++E AA + + +
Sbjct: 75 LKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+ H ++HRDLKPEN L +++++ +K IDFGLS F+ +
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 284 bits (730), Expect = 3e-93
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 122 KTGNLKEMYSLGRK-LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
+G +++Y L LG+G C+ T +E+A K I K+ V RE+
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVE 62
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
+++ GH NV++++ +E+ ++V E GG + I +R H+ E +A+ + + +
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVAS 122
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
++ H+ G+ HRDLKPEN L + + +P+K DF L +
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 282 bits (724), Expect = 7e-93
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 4/170 (2%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREI 179
G G++ + Y+L +G+G +G + V+K T+ A K I K + EDV+ ++EI
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEI 57
Query: 180 RIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
IM L HPN+I++ +ED +++VMELC GGELF+R++ + + E AA + + ++
Sbjct: 58 EIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
V CH L V HRDLKPENFLF+ ++PLK IDFGL+ F+PG R
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 1e-92
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 93 QQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKAT 152
S ++ G + K G+L EMY +KLG G +G LC +K T
Sbjct: 2 HHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVT 61
Query: 153 QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212
E A K I K ++T + E+ ++ L HPN++++ +ED ++VME
Sbjct: 62 HVERAIKIIRKTSVSTS-SNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYK 119
Query: 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272
GGELFD II R + E AA + + ++ V H ++HRDLKPEN L +++++A +K
Sbjct: 120 GGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIK 179
Query: 273 TIDFGLSMFFRPGLTFR 289
+DFGLS F +
Sbjct: 180 IVDFGLSAVFENQKKMK 196
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 219 bits (560), Expect = 7e-66
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 334 RVIAESL-SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN--------LMDSEI 384
+A L S+EE L ++F+ ID + G + +EL G ++ ++SE+
Sbjct: 333 LYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEV 392
Query: 385 DGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTAC 444
D ++ A D D +G +DY EF+ + + +D + +AF FD+DG+G I+ DEL +
Sbjct: 393 DAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF 452
Query: 445 QQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
L+ +++I +D +NDG +D+ EF M+Q
Sbjct: 453 GLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 283 bits (726), Expect = 3e-92
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 11/214 (5%)
Query: 81 INNNRQPPAPVP-----QQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRK 135
++++ + V Q S A +++ + + G L + + + +
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESE 60
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G + C +K TQK +A K + K D + VR EI ++ L+ HPN+I++
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLK 114
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+E + +V+EL GGELFDRI+++G+Y+ER AAD + I+ V H G++HRDL
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 256 KPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
KPEN L+ +APLK DFGLS + +
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 286 bits (734), Expect = 1e-91
Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 2/168 (1%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI 181
G E Y++ LG+G FG C ++ TQ+E+A K I K + D + RE+ +
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVEL 74
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ L HPN++++ ED+ + ++V EL GGELFD II+R ++E AA + + +
Sbjct: 75 LKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+ H ++HRDLKPEN L +++++ +K IDFGLS F+ +
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 2e-62
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 334 RVIAESLSE-EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV--------------GAN 378
+A L+ +E L E+F+ +DT+N G + +EL +G +
Sbjct: 318 LYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGS 377
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
++ +ID LM D+D SG+++Y EFIA+ + + + M AF FDKDGSG I+
Sbjct: 378 TIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTK 437
Query: 439 ELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
EL Q + +LE II +VD + DG +D++EFV M+Q+
Sbjct: 438 ELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
++ FKM D D SG I+ +EL K + +++ E++ +++ D + G +D+ EF+
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 408 MLHLNKIQ 415
+ + + +
Sbjct: 479 LQNFVRNE 486
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 278 bits (713), Expect = 3e-91
Identities = 57/170 (33%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE---DVEDVRREIRI 181
+++ Y +G +LG GQF C +K T KE+A K I KR+L++ E++ RE+ I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ + HPN+I + +E+ V +++EL +GGELFD + ++ TE +A + I+
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGLSMFFRPGLTFRV 290
V HS + H DLKPEN + +++ +K IDFG++ G F+
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 170
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 276 bits (709), Expect = 1e-90
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDV 175
G G + +++ RKLG G FG L E+++ E K+I K + ++ +E +
Sbjct: 10 GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQI 67
Query: 176 RREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR----GHYTERKA 231
EI ++ L HPN+I+I +ED +++VME C GGEL +RI+ +E
Sbjct: 68 EAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYV 126
Query: 232 ADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
A+L + ++ + HS V+H+DLKPEN LF + +P+K IDFGL+ F+
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST 184
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 277 bits (711), Expect = 7e-90
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 114 QVGSVLGRKT--GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE- 170
G +L +++Y L +G+G F C+ + T ++FA K + K T+
Sbjct: 8 GGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPG 67
Query: 171 -DVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH---- 225
ED++RE I H L HP++++++ Y +++V E G +L I++R
Sbjct: 68 LSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV 126
Query: 226 YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS-MFFRP 284
Y+E A+ R I+ + CH ++HRD+KP L +++ AP+K FG++
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186
Query: 285 GLTFR 289
GL
Sbjct: 187 GLVAG 191
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 276 bits (707), Expect = 8e-90
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE---DVEDVRRE 178
K +++ Y +G +LG GQF C EK+T E+A K I KR+ E++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 179 IRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
+ I+ + H NVI + YE+ V +++EL +GGELFD + Q+ +E +A + I
Sbjct: 66 VSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFRV 290
+ V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 280 bits (718), Expect = 1e-89
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREI 179
E Y L +LG+G F CV+ +E+A I +KL+ D + + RE
Sbjct: 3 TITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-DHQKLEREA 61
Query: 180 RIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
RI L HPN++++ + + +++ +L GGELF+ I+ R +Y+E A+ + I+
Sbjct: 62 RICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL 120
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
V CH +GV+HR+LKPEN L ++ + A +K DFGL++
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 5e-42
Identities = 19/147 (12%), Positives = 41/147 (27%), Gaps = 15/147 (10%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
+ + S + +K ++I+ ++G E K + L+
Sbjct: 307 MLATRNFSVRKQEIIKVTEQLIEAISNG--DFESYTKMCDPGMTAFEPEALGNLV----- 359
Query: 394 DNSGTMDYGEFIAA-MLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT 452
+D+ F + N + + D S I + G+ T
Sbjct: 360 ---EGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRT 416
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ V DG+ + V +
Sbjct: 417 A-QSEETRVWHRRDGKW---QIVHFHR 439
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 274 bits (703), Expect = 2e-89
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK--LTTEEDVEDVR- 176
T E Y LG+G C+ K T KE+A K I + E+V+++R
Sbjct: 9 SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 177 ---REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAD 233
+E+ I+ ++GHPN+IQ+ YE +V +L GELFD + ++ +E++
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+ R ++ V+ A H L ++HRDLKPEN L ++ +K DFG S PG R
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLR 181
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 274 bits (703), Expect = 2e-89
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
+T N+++ + LG G F FL ++ T K FA K I K + +E EI
Sbjct: 2 MQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE---NEIA 58
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
++ + H N++ + YE ++VM+L +GGELFDRI++RG YTE+ A+ + + ++
Sbjct: 59 VLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLS 117
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
V+ H G++HRDLKPEN L++ +E + + DFGLS + G
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 274 bits (703), Expect = 4e-89
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Query: 122 KTGNLKEMYSLG---RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
K + Y L + LG+G F CV K + + FA K I+KR + ++E
Sbjct: 2 KDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKE 55
Query: 179 IRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
I + GHPN++++ + D + +VMEL GGELF+RI ++ H++E +A+ + R +
Sbjct: 56 ITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL 115
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
V V H +GV+HRDLKPEN LF ++ + +K IDFG + P
Sbjct: 116 VSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 9e-89
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 115 VGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED 174
+ L R + + Y + +G G + C+ KAT EFA K I K K D
Sbjct: 9 IVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RD 61
Query: 175 VRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
EI I+ HPN+I + Y+D V+VV EL GGEL D+I+++ ++ER+A+ +
Sbjct: 62 PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAV 121
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRPG 285
I VE H+ GV+HRDLKP N L++++ ++ DFG + R
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 4e-88
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE---DVEDVRRE 178
K +++ Y +G +LG GQF C EK+T E+A K I KR+ E++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 179 IRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
+ I+ + HPN+I + YE+ V +++EL +GGELFD + Q+ +E +A + I
Sbjct: 66 VSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFRV 290
+ V H+ + H DLKPEN + +++ P +K IDFGL+ G+ F+
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 277 bits (709), Expect = 6e-87
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 6/228 (2%)
Query: 64 PAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKT 123
P P+ + + + + K
Sbjct: 93 PCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKH 152
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
++ + Y + +LG G FG E+AT FA K + D E VR+EI+ M
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMS 209
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRII-QRGHYTERKAADLTRIIVGVV 242
L HP ++ + A+ED + ++ E +GGELF+++ + +E +A + R + +
Sbjct: 210 VLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
H +H DLKPEN +F + LK IDFGL+ P + +V
Sbjct: 269 CHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHLDPKQSVKV 315
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 271 bits (695), Expect = 6e-87
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 29/242 (11%)
Query: 54 QSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGL 113
+ + P P P P P PP P + QPP P PQQ + K
Sbjct: 3 SNSQGQSPPVPFPAPAP-PPQPPTPALPHPPAQPPPPPPQQFPQFHVKS----------- 50
Query: 114 QVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE 173
+ +K + + + LG G G K TQ++FA K + +D
Sbjct: 51 ---GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCP 99
Query: 174 DVRREIRIMHHLAGHPNVIQIVGAYEDAVA----VHVVMELCAGGELFDRIIQRGH--YT 227
RRE+ + + P++++IV YE+ A + +VME GGELF RI RG +T
Sbjct: 100 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 159
Query: 228 ERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
ER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A LK DFG + +
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 288 FR 289
Sbjct: 220 LT 221
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 267 bits (684), Expect = 3e-86
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
L E Y + LG+G+FG CVE +++K + K + + D V++EI I++
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNI 57
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVE 243
H N++ + ++E + ++ E +G ++F+RI ER+ + ++
Sbjct: 58 A-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
HS + H D++PEN ++ + + +K I+FG + +PG FR+
Sbjct: 117 FLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRL 162
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 268 bits (688), Expect = 3e-86
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 54 QSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQP---PAPVPQQQQEQSKKPAHVKRISS 110
S D + S +N + A + ++ +SK+ + +
Sbjct: 8 HSSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIP 67
Query: 111 A--GLQVGSVLGRKTGNLKEMYSLGRK--LGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
A ++ K G + Y++ + LG G+FG C E AT + A K I R +
Sbjct: 68 APPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM 127
Query: 167 TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH- 225
+D E+V+ EI +M+ L H N+IQ+ A+E + +VME GGELFDRII +
Sbjct: 128 ---KDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN 183
Query: 226 YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
TE + I + H + ++H DLKPEN L +N ++ +K IDFGL+ ++P
Sbjct: 184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPR 242
Query: 286 LTFRV 290
+V
Sbjct: 243 EKLKV 247
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 263 bits (673), Expect = 2e-84
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 103 AHVKRISSAGLQ-VGSVLGRKTGNLKEMYSLGRK-LGQGQFGTTFLCVEKATQKEFACKS 160
AH S+GL+ + K + + Y L ++ LG G G C + T ++ A K
Sbjct: 2 AHHHHHHSSGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL 61
Query: 161 IAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----VAVHVVMELCAGGEL 216
+ R+E+ +G P+++ I+ YE+ + ++ME GGEL
Sbjct: 62 LYDSP--------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL 113
Query: 217 FDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274
F RI +RG +TER+AA++ R I ++ HS + HRD+KPEN L+ +++++A LK
Sbjct: 114 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 173
Query: 275 DFGLSMFFRPG 285
DFG +
Sbjct: 174 DFGFAKETTQN 184
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 260 bits (667), Expect = 7e-83
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI 181
K G++ + Y + +LG G FG CVEKAT + F K I D V+ EI I
Sbjct: 45 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISI 101
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVG 240
M+ L HP +I + A+ED + +++E +GGELFDRI + +E + + R
Sbjct: 102 MNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE 160
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
++ H ++H D+KPEN + ++ + +K IDFGL+ P +V
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKV 209
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 256 bits (655), Expect = 2e-82
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Query: 112 GLQVGSVLGRKTGN-LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE 170
G V S L K + + + LG G G K TQ++FA K + +
Sbjct: 1 GPHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------Q 52
Query: 171 DVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA----VHVVMELCAGGELFDRIIQRGH- 225
D RRE+ + + P++++IV YE+ A + +VME GGELF RI RG
Sbjct: 53 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 112
Query: 226 -YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+TER+A+++ + I ++ HS+ + HRD+KPEN L+ +++ A LK DFG
Sbjct: 113 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 3e-82
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE-----DVEDVRREI 179
L++ Y + + LG G G L E+ T K+ A K I+KRK +V EI
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 180 RIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
I+ L HP +I+I ++ ++V+EL GGELFD+++ E ++
Sbjct: 67 EILKKL-NHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
V+ H G++HRDLKPEN L +Q+E+ +K DFG S R
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 253 bits (648), Expect = 1e-79
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE-----DVEDV 175
L++ Y + + LG G G L E+ T K+ A + I+KRK +V
Sbjct: 128 VYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNV 187
Query: 176 RREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLT 235
EI I+ L HP +I+I ++ ++V+EL GGELFD+++ E
Sbjct: 188 ETEIEILKKL-NHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
++ V+ H G++HRDLKPEN L +Q+E+ +K DFG S R
Sbjct: 246 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 3e-79
Identities = 113/151 (74%), Positives = 133/151 (88%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
RVIAESLSEEEIAGLKEMF MID D SG IT EELK GL+RVGANL +SEI LMQA D+
Sbjct: 15 RVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADV 74
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ 453
DNSGT+DY EFIAA LHLNKI+REDH++AAF+YFDKDGSGYITPDELQ AC++FG++D +
Sbjct: 75 DNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVR 134
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484
+E+++R+VDQDNDGRIDY+EFVAMMQ +
Sbjct: 135 IEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 165
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 245 bits (626), Expect = 2e-77
Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 44/224 (19%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAK 163
H S+G + G L++ Y L +GQG +G + +E T+ A K + K
Sbjct: 2 HHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNK 61
Query: 164 RKL--TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRII 221
K+ +DVE ++ E+R+M L HPN+ ++ YED + +VMELC GG L D++
Sbjct: 62 NKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120
Query: 222 QRGH----------------------------------------YTERKAADLTRIIVGV 241
E+ +++ R I
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ H+ G+ HRD+KPENFLF + +K +DFGLS F
Sbjct: 181 LHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKL 223
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 3e-76
Identities = 45/150 (30%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
+IA+ L + EI L+ +F +D DNSG ++ +E+ GL+++G + +I +++ D
Sbjct: 45 TIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDS 104
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL---- 449
+ SG + Y +F+AA + +++ F +FD DG+G I+ +EL+ + +
Sbjct: 105 NASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPL 164
Query: 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
D ++ +++EVD + DG ID+ EF+ MM
Sbjct: 165 IDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 1e-75
Identities = 101/143 (70%), Positives = 123/143 (86%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
AE LSEEEI GLKE+FKMIDTDNSG IT +ELK GL+RVG+ LM+SEI LM A DID S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED 456
GT+DYGEFIAA +HLNK++RE+++ +AFSYFDKDGSGYIT DE+Q AC+ FGLDD ++D
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD 120
Query: 457 IIREVDQDNDGRIDYSEFVAMMQ 479
+I+E+DQDNDG+IDY EF AMM+
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMR 143
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 2e-21
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ + EE L F D D SGYITL+E+++ + G L D ID +++ D DN
Sbjct: 75 LNKLEREEN---LVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDN 129
Query: 396 SGTMDYGEFIAAMLHLNK--------IQREDHMYAAFSYFDKDGSGYITPDELQ 441
G +DYGEF A M +++ ++ A D + I
Sbjct: 130 DGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYFKH 183
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 6e-71
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
+IA+ ++ ++ LK F ++D D GYIT E+LKKGL++ G + D L+ D
Sbjct: 40 TIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLK-LPYNFDLLLDQIDS 98
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG----- 448
D SG +DY EFIAA L ++ ++ +Y AF FD D G IT EL
Sbjct: 99 DGSGKIDYTEFIAAALDRKQLSKK-LIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNI 157
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
D +++ +IR+VD++NDG+ID+ EF MM+
Sbjct: 158 TQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-17
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLD-DTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
F D+DG GYIT ++L+ ++ GL + ++ ++D D G+IDY+EF+A D
Sbjct: 57 TFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALD 115
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 2e-70
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 334 RVIAESLSE-EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----------GANLMD 381
+ L+ EE L ++F+ +D + G + +EL +G +++ ++ ++
Sbjct: 27 LFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIE 86
Query: 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
+E+D ++Q+ D D +G ++Y EF+ + + + + AAF FD DGSG IT +EL
Sbjct: 87 AEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG 146
Query: 442 TACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+DD +++E D++NDG +D+ EFV MMQ
Sbjct: 147 RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 213 bits (544), Expect = 2e-67
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 334 RVIAESLS--EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG 391
++A LS I + E+F +DT+++G ++ E+ L VG + +I+ ++QA
Sbjct: 25 NIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQAL 82
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDD 451
DI++ G + Y EF+A I+ + AAF+ DKD GYI+ ++ + LD+
Sbjct: 83 DINDRGNITYTEFMAGCYRWKNIE-STFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDN 141
Query: 452 TQLEDIIREVDQDNDG--------RIDYSEFVAMMQ 479
+++ V G +I + EF M
Sbjct: 142 NDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYML 177
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 8e-20
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 404 FIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQ 463
+A L + + + F D + +G ++ E+ T G+ + I++ +D
Sbjct: 26 IMAHELSVINNHIKY-INELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDI 84
Query: 464 DNDGRIDYSEFVAMMQD 480
++ G I Y+EF+A
Sbjct: 85 NDRGNITYTEFMAGCYR 101
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 212 bits (542), Expect = 4e-65
Identities = 32/157 (20%), Positives = 64/157 (40%), Gaps = 7/157 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R LSEE+ L+++F SG + ++LK+ L + + + + L +
Sbjct: 110 RPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVEN 169
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ 453
D G M Y +A L + A F D + +G ++ E + + G D
Sbjct: 170 DTKGRMSYITLVAVANDLAALV------ADFRKIDTNSNGTLSRKEFREHFVRLGFDKKS 223
Query: 454 -LEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
+ + R D+D + +SE+V + + + ++
Sbjct: 224 VQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYA 260
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 2e-48
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A + L F+ IDT+++G ++ +E ++ R+G + S D L + D D
Sbjct: 181 VAVANDLAA---LVADFRKIDTNSNGTLSRKEFREHFVRLGFDK-KSVQDALFRYADEDE 236
Query: 396 SGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--- 452
S + + E++ L L ++ +++ D D SG ++ +E+Q + + ++
Sbjct: 237 SDDVGFSEYVHLGLCLLVLRI------LYAFADFDKSGQLSKEEVQKVLEDAHIPESARK 290
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+ E VD D+ + Y EFV ++
Sbjct: 291 KFEHQFSVVDVDDSKSLSYQEFVMLV 316
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 2e-23
Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 7/143 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+E+ A L E + + + E ++ R A + L++ + D SG
Sbjct: 49 KEQEQKAKLAEYDQKVQNEFDARERAERERE-AARGDAAAEKQRLASLLKDLEDDASGYN 107
Query: 400 DYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI 457
ML + F GSG + +L+ ++ + + L+ +
Sbjct: 108 RLRP-SKPMLSEEDTNI---LRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKL 163
Query: 458 IREVDQDNDGRIDYSEFVAMMQD 480
V+ D GR+ Y VA+ D
Sbjct: 164 FVMVENDTKGRMSYITLVAVAND 186
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 1e-14
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-DSEIDGLMQAGDIDNSGTMDYGEFIA 406
L+ ++ D D SG ++ EE++K L+ + + D+D+S ++ Y EF+
Sbjct: 255 LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
Query: 407 AMLHLNKIQ 415
+L +
Sbjct: 315 LVLLMFHDD 323
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 1e-62
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
S I GL F+ +D D S + +E ++GL ++G L +E +G+ + D + S
Sbjct: 28 CLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGS 87
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-------- 448
GT+D EF+ A+ RE + AAF+ D+ G G +T D+L+
Sbjct: 88 GTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGE 147
Query: 449 -LDDTQLEDIIREVD-QDNDGRIDYSEFVAMMQD 480
+D L + D + DG++ +EF
Sbjct: 148 WTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSG 181
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-11
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ-------RVGANLMDSEIDG 386
R + +S+ A + F +D G +T+++L+ R G D +
Sbjct: 97 RALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRR 156
Query: 387 LMQAGDI-DNSGTMDYGEFIAAM 408
+ D + G + EF
Sbjct: 157 FLDNFDSSEKDGQVTLAEFQDYY 179
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 2e-62
Identities = 49/147 (33%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+ ++E F + DTD SG I +ELK ++ +G EI ++ D D SGT+
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 400 DYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
D+ EF+ M + + + + AF FD D SG IT +L+ ++ G L + +L++
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 457 IIREVDQDNDGRIDYSEFVAMMQDSGL 483
+I E D+++D ID EF+ +M+ + L
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIMKKTSL 168
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 3e-62
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLM 388
+ + L EE+ + E F + D +N G++ ELK ++ +G L EI L+
Sbjct: 6 SSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLI 65
Query: 389 QAGDIDNSGTMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
D + M Y +F M + K D + AF FD D +G I+ L+ ++
Sbjct: 66 DEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL 125
Query: 448 G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
G L D +L +I E D D DG I+ +EF+A+ DS
Sbjct: 126 GETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 6e-62
Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+ +FK ID + G ++ EE+K + + A + + + ++ D D +G +D EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 408 MLHLNKIQ---REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQD 464
+ + + + D DG G +T +E+ + ++ G++ + + + + D +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK--VAEQVMKADAN 119
Query: 465 NDGRIDYSEFVAMM 478
DG I EF+
Sbjct: 120 GDGYITLEEFLEFS 133
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 1e-14
Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+ LK ++K++D D G +T EE+ ++ + D + G +
Sbjct: 73 DKIG---LKVLYKLMDVDGDGKLTKEEVT----SFFKKHGIEKVAEQVMKADANGDGYIT 125
Query: 401 YGEFIAAML 409
EF+ L
Sbjct: 126 LEEFLEFSL 134
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 2e-61
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 393 IDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ +K + E+ + F FDK+ GYI +EL+ Q G
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY EF+ M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 196 bits (502), Expect = 4e-61
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 396 SGTMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+GT+D+ EF+ M + E+ + AF FDKDG+GYI+ EL+ G L D
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+++++IRE D D DG+++Y EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMT 147
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 3e-27
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEEE ++E F++ D D +GYI+ EL+ + +G L D E+D +++ DI
Sbjct: 75 RKMKDTDSEEE---IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 394 DNSGTMDYGEFIAAM----LHLNKIQREDHMYAAFSYFDKDGSGYIT 436
D G ++Y EF+ M R++ + K +
Sbjct: 132 DGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 6e-61
Identities = 41/142 (28%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+EE+ ++E F + D D +G I ++ELK ++ +G EI ++ D + +G M+
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 401 YGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI 457
+G+F+ M +++ ++ + AF FD D +G I+ L+ ++ G L D +L+++
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 458 IREVDQDNDGRIDYSEFVAMMQ 479
I E D+D DG + EF+ +M+
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMK 142
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 194 bits (496), Expect = 2e-60
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLNK----IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
D+ EF+ M+ K + E+ + F FDK+ G+I +EL + G + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 193 bits (492), Expect = 5e-60
Identities = 49/147 (33%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
++++L+EE+IA KE F + D DNSG I+ EL ++ +G + ++E+ LM D+D
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 396 SGTMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+ +++ EF+A M L E + AF FDK+G G I+ EL+ G L D
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
++++++REV D G I+ +F A++
Sbjct: 121 EVDEMLREVS-DGSGEINIKQFAALLS 146
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 1e-59
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 337 AESLSEEEIAGLKEMFKMIDT-DNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
LS ++ L+ F+ +T + SG ++ +++ L+ +G S I L+ D
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 396 SGTMDYGEFIAAML-----HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-- 448
+G +D+ F +N Q + + AF +DK+G+GYI+ D ++ +
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDET 123
Query: 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
L L+ +I E+D D G +D+ EF+ +M
Sbjct: 124 LSSEDLDAMIDEIDADGSGTVDFEEFMGVM 153
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 5e-59
Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 17/167 (10%)
Query: 334 RVIAESLSEEEIAG----LKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLM 388
I +++ E+ A E+FK D + +G + +E+ G + + S + +
Sbjct: 32 ERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDIT 91
Query: 389 Q---------AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDE 439
+ ++N G+ D+ EF+ L L I + F D G+ + +E
Sbjct: 92 KRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEE 151
Query: 440 LQTACQQFGLDDTQLED---IIREVDQDNDGRIDYSEFVAMMQDSGL 483
+ A + ++ED + +E+D++ G + + EF A L
Sbjct: 152 FKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAVKL 198
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 2e-15
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGT 398
E L MF ID + + EE K+ + ++ A + L + D + +G+
Sbjct: 127 YDFFE---LTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGS 183
Query: 399 MDYGEFIAAMLHLNKIQRED 418
+ + EF A + D
Sbjct: 184 VTFDEFAAWASAVKLDADGD 203
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 1e-58
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ SL EEI L+E F+ D D GYI +L ++ +G + E+ L Q +++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 396 SGTMDYGEFIAAMLHLNKIQ-----REDHMYAAFSYFDKDGSGYITPDELQTACQQFG-- 448
G +D+ +F+ M + + AF FD +G G I+ EL+ A +
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 449 -LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ +E+IIR+VD + DGR+D+ EFV MM
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 2e-58
Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 23/168 (13%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKG-----LQRVGANLMDSEIDGLM 388
++ + + I K MF +D + +G ITL+E+ ++ A ++ +
Sbjct: 8 KLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVC 67
Query: 389 QAGDIDNSGT-----MDYGEFIAAM-----LHLNKIQREDH------MYAAFSYFDKDGS 432
G + + +F+ L K R + A F FDKDGS
Sbjct: 68 VEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGS 127
Query: 433 GYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
G IT DE + + G E R D DN G +D E
Sbjct: 128 GTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQH 175
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 2e-16
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
+F + D D SG ITL+E K + G + + + + D+DN+G +D
Sbjct: 109 TLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDV 168
Query: 402 GEFIAAML--HLNKIQREDHMYA 422
E L D +Y
Sbjct: 169 DEMTRQHLGFWYTLDPEADGLYG 191
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 2e-57
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
AE L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 397 GTMDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
GT+D+ EF++ M + + E+ + AF FD+DG+G I+ EL+ G L D +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
++++IRE D D DG I+Y EFV MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 2e-16
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 410 HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD--DTQLEDIIREVDQDNDG 467
L + Q + AF+ FDKDG G IT EL T + G + + +L+D+I EVD D +G
Sbjct: 3 QLTEEQIAE-FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 468 RIDYSEFVAMMQ 479
ID+ EF+++M
Sbjct: 62 TIDFPEFLSLMA 73
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 2e-16
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + E SEEE+ E FK+ D D +G I+ EL+ + +G L D E+D +++ DI
Sbjct: 74 RKMKEQDSEEEL---IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 394 DNSGTMDYGEFIAAML 409
D G ++Y EF+ M+
Sbjct: 131 DGDGHINYEEFVRMMV 146
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 184 bits (471), Expect = 6e-57
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
+++++ KE F++ D++ +G+IT E L+ L++ G + + + + D +G + +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 402 GEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDII 458
EF++ M + + ED + AF FD +G+GYI LQ A G L + + +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 459 REVDQDNDGRIDYSEFVAMM 478
+ + G+I Y F+ M
Sbjct: 122 GITETE-KGQIRYDNFINTM 140
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 7e-57
Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 31/199 (15%)
Query: 302 QRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSG 361
+R + R L G+ W + E L + ++ L + F D D+ G
Sbjct: 3 ERLNEQNNESYRYLRSVGNQW-----------QFNVEDLHPKMLSRLYKRFDTFDLDSDG 51
Query: 362 YITLEELKKGLQRVGANL---------MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412
+ ++E+ R+ + M + ++ + +++ A
Sbjct: 52 KMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFA 111
Query: 413 KIQREDH-----------MYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREV 461
+ +RE + + D DG G + DEL+T + F + +
Sbjct: 112 EAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKA 171
Query: 462 DQDNDGRIDYSEFVAMMQD 480
D D G+++ +E V + +
Sbjct: 172 DTDKSGKLERTELVHLFRK 190
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 1e-08
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 13/126 (10%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-----------ANLMDSEIDG 386
+ E+ ++ F + + E+ + + +L+ +
Sbjct: 73 DEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNS 132
Query: 387 LMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
D D GT+D E M + ++ Y F D D SG + EL ++
Sbjct: 133 YYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELVHLFRK 190
Query: 447 FGLDDT 452
F ++
Sbjct: 191 FWMEPY 196
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGL 387
+ +E F+ DTD SG + EL ++ D + DG+
Sbjct: 159 VPQEAA---YTFFEKADTDKSGKLERTELVHLFRKFWMEPYDPQWDGV 203
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 1e-54
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
+EI L + FK +D DNSG +++EE + N + ++ D D +G +D+
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMSLP-ELQQNP---LVQRVIDIFDTDGNGEVDF 57
Query: 402 GEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLE-- 455
EFI + + +E + AF +D D GYI+ EL + L DTQL+
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117
Query: 456 --DIIREVDQDNDGRIDYSEFVAMMQDSGLGKK 486
I D+D DGRI + EF A++ + KK
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVVGGLDIHKK 150
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 1e-52
Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 16/160 (10%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN--LMDSEIDGLM---------Q 389
S+ + +K F ID D G IT + + +R + LM
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQREDH-----MYAAFSYFDKDGSGYITPDELQTAC 444
+ +D FI +M + K + F D + I+ DE
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 445 QQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484
GLD T +D +NDG + EFV D +
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMN 160
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 3e-14
Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
L F+ +DT+ I+ +E +G L + A D +N G
Sbjct: 86 PEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDG 143
Query: 398 TMDYGEFIAAM 408
+ EF+ A
Sbjct: 144 LLSLEEFVIAG 154
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-11
Identities = 15/126 (11%), Positives = 38/126 (30%), Gaps = 13/126 (10%)
Query: 337 AESLSEEEIAGLKEMFKMI------DTDNSGYITLEELKKGLQRV-----GANLMDSEID 385
+ E L + + I ++ + ++++ +
Sbjct: 38 ESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLP 97
Query: 386 GLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQ 445
+A D + + E+ L + A+F D + G ++ +E A
Sbjct: 98 LFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
Query: 446 QFGLDD 451
F ++D
Sbjct: 156 DFFMND 161
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 3e-52
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 11/162 (6%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
K + LG G GT + ++ A K I E RE++++
Sbjct: 23 KISFCPKDVLGHGAEGT-IVYRGMFDNRDVAVKRILP------ECFSFADREVQLLRESD 75
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEAC 245
HPNVI+ +D ++ +ELC L + + Q+ + + L + +
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTI--DFGLSMFFRPG 285
HSL ++HRDLKP N L +K + DFGL G
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 176 bits (447), Expect = 3e-51
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
++ L LGQG F K T FA K DV RE ++
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLK 62
Query: 184 HLAGHPNVIQIVGAYEDAVAVHV--VMELCAGGELFDRIIQRGH---YTERKAADLTRII 238
L H N++++ E+ H +ME C G L+ + + + E + + R +
Sbjct: 63 KLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 239 VGVVEACHSLGVMHRDLKPENFL-FINQQEEAPLKTIDFGLSMFFRPG 285
VG + G++HR++KP N + I + ++ K DFG +
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 5e-51
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
+ ++ ++ + + F +D D SG + + EL G G L +M+ D
Sbjct: 39 FPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDT 98
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL-DDT 452
D +G + + EF+A + Y F + SG + P E+ A QQ G +
Sbjct: 99 DFNGHISFYEFMAMYKFMEL------AYNLFVMNARARSGTLEPHEILPALQQLGFYINQ 152
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+ ++ + D + ++A+
Sbjct: 153 RTSLLLHRLFARGMAFCDLNCWIAIC 178
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 3e-14
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYS 472
+ +Y F D+D SG + +EL G L ++R D D +G I +
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 473 EFVAMMQDSGLGKKVFK 489
EF+AM + L +F
Sbjct: 108 EFMAMYKFMELAYNLFV 124
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 1e-12
Identities = 13/99 (13%), Positives = 30/99 (30%), Gaps = 12/99 (12%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
+ + +F M SG + E+ LQ++G + + L+ D
Sbjct: 114 KFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYI-NQRTSLLLHRLFARGMAFCDLN 172
Query: 403 EFIAAMLHLNKIQREDHMYAAF-----SYFDKDGSGYIT 436
+IA + +A+ + + +
Sbjct: 173 CWIAICAFAAQ------TRSAYQMIFMNPYYGPMKPFNP 205
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 178 bits (452), Expect = 8e-51
Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 25/186 (13%)
Query: 117 SVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR 176
+ + +LK + + LG G GT + A K + +
Sbjct: 4 ANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF------CDIAL 56
Query: 177 REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY-------TER 229
EI+++ HPNVI+ + +++ +ELC L D + + E
Sbjct: 57 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEY 115
Query: 230 KAADLTRIIVGVVEACHSLGVMHRDLKPENFLF----------INQQEEAPLKTIDFGLS 279
L R I V HSL ++HRDLKP+N L E + DFGL
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 280 MFFRPG 285
G
Sbjct: 176 KKLDSG 181
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 6e-50
Identities = 65/226 (28%), Positives = 87/226 (38%), Gaps = 29/226 (12%)
Query: 64 PAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKT 123
PAP P PPA + P +R
Sbjct: 2 PAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVL---VDPRSRRR---------------- 42
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
Y GR LG+G F F + T++ FA K + K L E + EI I
Sbjct: 43 ------YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR 96
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
LA H +V+ G +ED V VV+ELC L + +R TE +A R IV +
Sbjct: 97 SLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
H V+HRDLK N LF+N+ E +K DFGL+ +
Sbjct: 156 YLHRNRVIHRDLKLGN-LFLNEDLE--VKIGDFGLATKVEYDGERK 198
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 1e-49
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
++ L LGQG F K T FA K DV RE ++
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLK 62
Query: 184 HLAGHPNVIQIVGAYEDAVAVHV--VMELCAGGELFDRIIQRGH---YTERKAADLTRII 238
L H N++++ E+ H +ME C G L+ + + + E + + R +
Sbjct: 63 KLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 239 VGVVEACHSLGVMHRDLKPENFL-FINQQEEAPLKTIDFGLSMFFRPG 285
VG + G++HR++KP N + I + ++ K DFG +
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 2e-49
Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 23/168 (13%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL---------------MDSEID 385
+ LK+ F D D +G + + +K Q + D
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 386 GLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDH--------MYAAFSYFDKDGSGYITP 437
L + + + G++ +FI +L Q E + DK+ G I
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINA 121
Query: 438 DELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGK 485
DE G+ + + +VD + +G + E + ++D G+
Sbjct: 122 DEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFHFGR 169
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 1e-13
Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
S + +K + M D + G I +E L +G + +E D + +G
Sbjct: 94 ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNG 151
Query: 398 TMDYGEFIAAM 408
+ E + A+
Sbjct: 152 ELSLDELLTAV 162
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 5e-11
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 12/128 (9%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG--------ANLMDSEIDGLM 388
++L + K + G +T E+ + + + ++ + G++
Sbjct: 49 VQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIV 108
Query: 389 QAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF- 447
D + G ++ EF A + L + AF+ D +G+G ++ DEL TA + F
Sbjct: 109 GMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFH 166
Query: 448 -GLDDTQL 454
G D +L
Sbjct: 167 FGRLDVEL 174
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 5e-04
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDG 386
+S+ E E F +DT+ +G ++L+EL ++ +D E+ G
Sbjct: 133 MSKAEA---AEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVELLG 176
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 9e-49
Identities = 31/148 (20%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
+ L +++I +KE F MID D G+++ E++K +++G D E+ +++
Sbjct: 6 SGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP- 64
Query: 394 DNSGTMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
G +++ F++ L+ E+ + AF+ FD+ + + + ++ + G +
Sbjct: 65 ---GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN 121
Query: 451 DTQLEDIIREVDQDNDGRIDYSEFVAMM 478
++ +E + G+ DY +F AM+
Sbjct: 122 KDEMRMTFKEAPVE-GGKFDYVKFTAMI 148
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
++ + SEE I + F M D + + +E +K L+ +G N E+ + ++
Sbjct: 80 LSGTDSEETI---RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG 136
Query: 396 SGTMDYGEFIAAMLHLNK 413
G DY +F A + +
Sbjct: 137 -GKFDYVKFTAMIKGSGE 153
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 1e-48
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDY 401
+ + L +F+ +D D SG I+ EL++ L + ++ D +N +++
Sbjct: 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 402 GEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIR 459
EF ++ Q F +D+D SG I +EL+ A FG L D + +IR
Sbjct: 64 SEFTGVWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 117
Query: 460 EVDQDNDGRIDYSEFVAMM 478
+ D+ G+I + +F+
Sbjct: 118 KFDRQGRGQIAFDDFIQGC 136
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 3e-24
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + +F+ D DNSG I ELK+ L G L D D L++ D G + + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
I + L + + F +D D G+I Q
Sbjct: 133 IQGCIVLQR------LTDIFRRYDTDQDGWIQVSYEQ 163
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 2e-48
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 25/162 (15%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA---------------NLMDSEID 385
E + F D D +G+I + + + A ++
Sbjct: 2 YERR---IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQ 58
Query: 386 GLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED-------HMYAAFSYFDKDGSGYITPD 438
GL D D + EF+ + + + + ++AA D DG G +T
Sbjct: 59 GLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVA 118
Query: 439 ELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ A FG+ + +D D DG++ +E V
Sbjct: 119 DTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFAR 160
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 1e-13
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ +E L + DTD G +T+ + + L G + + A D D G
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDG 147
Query: 398 TMDYGEFIAAM 408
+ E + A
Sbjct: 148 KVGETEIVPAF 158
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-09
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 9/118 (7%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-------LMDSEIDGLMQ 389
++L A + + + D D IT EE G + + + + +
Sbjct: 46 GQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALG 105
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
D D G + + A+ ED A + D DG G + E+ A ++
Sbjct: 106 VADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAFARY 161
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 3e-48
Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Query: 328 VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGL 387
+P + + L E F+ +DTD SG I++ EL L G + + L
Sbjct: 9 MPTSTGVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKL 68
Query: 388 MQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
+ D ++SG + + EF + ++ F D G G + +E++ A
Sbjct: 69 LHMYDKNHSGEITFDEFKDLHHFILSMRE------GFRKRDSSGDGRLDSNEVRAALLSS 122
Query: 448 G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
G + + + ++R+ D+ G + + ++V +
Sbjct: 123 GYQVSEQTFQALMRKFDRQRRGSLGFDDYVELS 155
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 6e-23
Identities = 16/92 (17%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I ++E F+ D+ G + E++ L G + + LM+ D G++ + ++
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
+ + + +++ F+++D++ +G +T
Sbjct: 152 VELSIFVCRVRN------VFAFYDRERTGQVT 177
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 2e-17
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYS 472
+ F D DGSG I+ EL A G E ++ D+++ G I +
Sbjct: 24 NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
Query: 473 EFVAMMQDSGLGKKVFK 489
EF + ++ F+
Sbjct: 84 EFKDLHHFILSMREGFR 100
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 3e-48
Identities = 34/170 (20%), Positives = 60/170 (35%), Gaps = 23/170 (13%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----GANLMDSEIDGLM 388
++ ++ + I K MF +D +++G I+L+E+ + GA ++
Sbjct: 4 KLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDA 63
Query: 389 QAGDIDNSGTM-----DYGEFIAAMLHLNKIQREDH-----------MYAAFSYFDKDGS 432
+G D+ +I L + E + A F DKD +
Sbjct: 64 VEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQN 123
Query: 433 GYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
G IT DE + + G E+ R D D G++D E
Sbjct: 124 GAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 173
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 7e-19
Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A++ +F ++D D +G ITL+E K + G + + + DID S
Sbjct: 100 AKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDES 159
Query: 397 GTMDYGEFIAAMLH--LNKIQREDHMYAAF 424
G +D E L + +Y
Sbjct: 160 GQLDVDEMTRQHLGFWYTMDPACEKLYGGA 189
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 163 bits (413), Expect = 9e-48
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDS-EIDGLMQAGDI 393
+++ +E F SG TL E K L G N + ID + D
Sbjct: 11 GDQKAVPTQETHVWYRTFM--MEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDT 68
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF----GL 449
+ G +D+ EFIAA+ + + + E + F +D DG+G I +EL G
Sbjct: 69 NKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQ 128
Query: 450 DDTQLED----IIREVDQDNDGRIDYSEFVAMMQ-DSGLGKKVFK 489
E+ + ++D +NDG + EF+ M D L + V+K
Sbjct: 129 QTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYK 173
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 2e-47
Identities = 56/160 (35%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y GR LG+G F F + T++ FA K + K L E + EI I LA H
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQ 75
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+V+ G +ED V VV+ELC L + +R TE +A R IV + H
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
V+HRDLK N LF+N+ E +K DFGL+ +
Sbjct: 136 VIHRDLKLGN-LFLNEDLE--VKIGDFGLATKVEYDGERK 172
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 1e-46
Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 18/163 (11%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG---------ANLMDSEIDG 386
I ES + +K + +D G+I+ E+ + R+ A E
Sbjct: 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63
Query: 387 LMQAGDIDNSGTMDYGEFIAAMLHL-------NKIQREDHMYAAFSYFDKDGSGYITPDE 439
+ + + E K + D D GY++ E
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 440 LQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ Q G L D + +D + +G+I EF+ + D
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND 166
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 3e-16
Identities = 23/83 (27%), Positives = 35/83 (42%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
+ M+ IDTD GY++L E K LQ VG +L D + D + +G +
Sbjct: 98 AMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR 157
Query: 402 GEFIAAMLHLNKIQREDHMYAAF 424
EF+ + E + AF
Sbjct: 158 DEFLVTVNDFLFGLEETALANAF 180
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 5e-13
Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 11/78 (14%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTA----CQQFGLDDTQ-------LEDIIREVDQ 463
M D G G+I+ ++ + + L + + ++
Sbjct: 11 YHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGL 70
Query: 464 DNDGRIDYSEFVAMMQDS 481
RI E DS
Sbjct: 71 APGVRISVEEAAVNATDS 88
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 6e-46
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 377 ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
A L D+++ + A + + EF A + +K D + AF D+D SG+I
Sbjct: 4 AGLKDADVAAALAACSAA--DSFKHKEFFAKVGLASK--SLDDVKKAFYVIDQDKSGFIE 59
Query: 437 PDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
DEL+ Q F L D + + + + D+D DG I EF AM++
Sbjct: 60 EDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 1e-17
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSG 397
S ++ +K+ F +ID D SG+I +ELK + L D+E + GD D G
Sbjct: 39 SLDD---VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDG 95
Query: 398 TMDYGEFIAAM 408
+ EF A +
Sbjct: 96 MIGVDEFAAMI 106
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 4e-45
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDID 394
+ E EI KE F +ID + G I ++L++ +G N+ + E+D +++ +
Sbjct: 15 VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----E 70
Query: 395 NSGTMDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451
SG +++ F+ L ED + AF D DG G I L+ G
Sbjct: 71 ASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTP 130
Query: 452 TQLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++ D G +DY ++
Sbjct: 131 EEIKNMWAAFPPDVAGNVDYKNICYVI 157
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 9e-17
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
+ + E+ I FK++D D G I L++ L G EI + A
Sbjct: 86 EKLKGADPEDVI---MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPP 142
Query: 394 DNSGTMDYGEFIAAMLHLNKIQRE 417
D +G +DY + H + E
Sbjct: 143 DVAGNVDYKNICYVITHGEDAEGE 166
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-12
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
AF+ D++ G I D+L+ G + + + + + ++ G I+++ F+ M +
Sbjct: 30 AFTVIDQNADGIIDKDDLRETFAAMGRLNVK-NEELDAMIKEASGPINFTVFLTMFGE 86
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 8e-45
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E + +G LG+G F + T E A K I K+ + V+ V+ E++I L
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK- 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACH 246
HP+++++ +ED+ V++V+E+C GE+ + R ++E +A I+ + H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S G++HRDL N L + + +K DFGL+
Sbjct: 130 SHGILHRDLTLSN-LLLTRNMN--IKIADFGLA 159
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-44
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + +LG G FG + + T ++ A K + + ++ E EI+IM L HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLN-HP 72
Query: 190 NVIQIVGAYEDAVAVH------VVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVG 240
NV+ + + + ME C GG+L + Q + E L I
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ H ++HRDLKPEN + + K ID G + G
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 3e-44
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E + +GR LG+G+FG +L EK ++ A K + K +L +RRE+ I HL
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 67
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+HRD+KPEN L + E LK DFG S
Sbjct: 128 KRVIHRDIKPENLL-LGSAGE--LKIADFGWS 156
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 4e-44
Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 338 ESLSEEEIAGLKEMFK-MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
++ + A L+E +K ++ SG + + E K+ + ++ + +A D +
Sbjct: 14 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 73
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQ----------- 445
T+D+ E++AA+ + + E + F +DKD +G I EL +
Sbjct: 74 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 133
Query: 446 --------QFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + ++ I VD++ DG++ +EFV +
Sbjct: 134 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 175
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 7e-07
Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 17/116 (14%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
++ MF+ DT+ I E L V ++ ++ + D D +G +D E +
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDI 120
Query: 408 MLHLNKIQR-----------------EDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
+ + K+++ E+ + F D++G G ++ +E ++
Sbjct: 121 VESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 4e-44
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 104 HVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAK 163
H S L ++ + +YS+ +++G G F + + ++ +A K +
Sbjct: 4 HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNL 62
Query: 164 RKLTTEEDVEDVRREIRIMHHLAGH-PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQ 222
+ + ++ R EI ++ L H +I++ +++VME C +L + +
Sbjct: 63 EEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK 120
Query: 223 RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ + + ++ V H G++H DLKP NFL ++ LK IDFG++
Sbjct: 121 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQM 176
Query: 283 RPGLT 287
+P T
Sbjct: 177 QPDTT 181
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 9e-44
Identities = 25/165 (15%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL------MDSEIDGLMQAGDI 393
S + E++ D D SGY+ +EL+ +Q + + E+ +
Sbjct: 10 SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69
Query: 394 DNSGTMDYGEFIAAM---------LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTAC 444
+ G + E + +++ + + +D D SG+I +EL+
Sbjct: 70 RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129
Query: 445 QQFGLDDTQ----------LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + + +++ D +NDG+++ +E ++
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLP 174
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-36
Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 26/166 (15%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL--------MDSEIDGL 387
+ S EE + ++ DTD+SG+I EELK L+ + + D +
Sbjct: 96 CQQLKSCEE---FMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLM 152
Query: 388 MQAGDIDNSGTMDYGEFIAAM--------LHLNKIQREDHMYAAFSYFDKDGSGYITPDE 439
++ D +N G ++ E + AF +D+DG+GYI +E
Sbjct: 153 LKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENE 212
Query: 440 LQTACQQFG--LDDTQLEDIIRE-----VDQDNDGRIDYSEFVAMM 478
L + + I + + G++ ++ ++
Sbjct: 213 LDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALIL 258
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 6e-15
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT--------QLEDIIREVDQDNDGRIDYSEF 474
+ +FD DGSGY+ ELQ Q+ +++ + + Q +DG+I E
Sbjct: 21 IWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVEL 80
Query: 475 VAMMQDSGLGKKVFK 489
++ +F+
Sbjct: 81 AHVLPTEENFLLLFR 95
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 1e-43
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ +I KE F MID + G+I E+L L +G N D ++G+M G +
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPI 56
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
++ F+ LN ED + AF+ FD++ SG+I D L+ G D ++++
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+ RE D G +Y EF ++
Sbjct: 117 MYREAPIDKKGNFNYVEFTRIL 138
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 72.5 bits (179), Expect = 2e-15
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
E+ I + F D + SG+I + L++ L +G D E+D + + ID G +
Sbjct: 74 PEDVI---RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFN 130
Query: 401 YGEFIAAMLH 410
Y EF + H
Sbjct: 131 YVEFTRILKH 140
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 1e-12
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
AF+ D++ G+I ++L G + T ++ + + + G I+++ F+ M +
Sbjct: 12 AFNMIDQNRDGFIDKEDLHDMLASMGKNPT--DEYLEGMMSEAPGPINFTMFLTMFGE 67
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 2e-43
Identities = 22/171 (12%), Positives = 51/171 (29%), Gaps = 25/171 (14%)
Query: 335 VIAESLSEEEIAGLKEMFK-MIDTDNSGYITLEELKKGLQRVGA---------------N 378
+ A LS+ + + +F D ++ G I ++ + ++++
Sbjct: 1 MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDH---------MYAAFSYFDK 429
+ DGL + D + + E++ K + M F D
Sbjct: 61 TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120
Query: 430 DGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
G I E T +G+ + + + + F + +
Sbjct: 121 SGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWTE 171
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 6e-13
Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 2/78 (2%)
Query: 331 IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQA 390
+ ESL E + MF + DT I E G + S+ D
Sbjct: 94 VKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDT 151
Query: 391 GDIDNSGTMDYGEFIAAM 408
+ F
Sbjct: 152 LSDGGKTMVTREIFARLW 169
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 5e-12
Identities = 14/124 (11%), Positives = 32/124 (25%), Gaps = 11/124 (8%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---------LMDSEIDGL 387
+ K D + +T EE K + + ++ +
Sbjct: 55 HNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFM 114
Query: 388 MQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
D +D E+ + + AAF G +T + ++
Sbjct: 115 FDVNDTSGDNIIDKHEYSTVYMSYGI--PKSDCDAAFDTLSDGGKTMVTREIFARLWTEY 172
Query: 448 GLDD 451
+ +
Sbjct: 173 FVSN 176
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 3e-43
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 82 NNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQF 141
+++ VP+ H +++ G++ L+ Y +G LG G F
Sbjct: 6 HHHHHSSGLVPRGSHMAPCNDLHATKLAP---------GKEKEPLESQYQVGPLLGSGGF 56
Query: 142 GTTFLCVEKATQKEFACKSIAKRKLTTEEDVED---VRREIRIMHHLA-GHPNVIQIVGA 197
G+ + + + A K + K +++ ++ + V E+ ++ ++ G VI+++
Sbjct: 57 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116
Query: 198 YEDAVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLK 256
+E + +++E +LFD I +RG E A ++ V CH+ GV+HRD+K
Sbjct: 117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 176
Query: 257 PENFLFINQQEEAPLKTIDFGLSMFFRPGL--TF 288
EN L LK IDFG + + F
Sbjct: 177 DENILI--DLNRGELKLIDFGSGALLKDTVYTDF 208
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 3e-43
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+ + +GR LG+G+FG +L EK + A K + K +L E +RREI I HL
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR- 72
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HPN++++ + D +++++E GEL+ + + G + E+++A + + CH
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+HRD+KPEN L + + E LK DFG S
Sbjct: 133 RKVIHRDIKPEN-LLMGYKGE--LKIADFGWS 161
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 4e-43
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I+ + + GT DY F + K + + F DKD SG+I +
Sbjct: 6 LKADDINKAIS--AFKDPGTFDYKRFFHLVGLKGK--TDAQVKEVFEILDKDQSGFIEEE 61
Query: 439 ELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
EL+ + F L+DT+ + ++ D D+DG+I EF M+ +
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 1e-17
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAGDIDNSG 397
++ + +KE+F+++D D SG+I EELK KG G +L D+E L+ AGD D+ G
Sbjct: 39 TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 398 TMDYGEFIAAM 408
+ EF +
Sbjct: 96 KIGADEFAKMV 106
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 151 bits (385), Expect = 8e-43
Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y LG LG G FG + + T + A K + ++K+ + + V ++REI+ + HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HP 71
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ +VME +GGELFD I + G E +A L + I+ V+ CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
V+HRDLKPEN L K DFGLS G
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG 164
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 1e-42
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED---- 174
L G + YS LG G FG + V+K KE K I K K+ + +ED
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG 74
Query: 175 -VRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL-CAGGELFDRIIQRGHYTERKAA 232
V EI I+ + H N+I+++ +E+ +VME +G +LF I + E A+
Sbjct: 75 KVTLEIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
+ R +V V ++HRD+K EN + E+ +K IDFG + + G F +
Sbjct: 134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTF 189
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 3e-42
Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 22/191 (11%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ LGQG FG + +A K I TEE + + E+ ++ L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLN-HQ 62
Query: 190 NVIQIVGAYEDAVAVHV-------------VMELCAGGELFDRIIQRGHYTER-KAADLT 235
V++ A+ + ME C G L+D I +R + L
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLH 295
R I+ + HS G++HRDLKP N E +K DFGL+ L +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 296 FLFFQKQRQSV 306
S
Sbjct: 180 LPGSSDNLTSA 190
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 153 bits (387), Expect = 5e-42
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 16/218 (7%)
Query: 72 QSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHV-KRISSAGLQVGSVLGRKTGNLKEMY 130
S+ P A +Q + + SS+ + SV GR Y
Sbjct: 6 HSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRI-------Y 58
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-P 189
S+ +++G G F + + ++ +A K + + + ++ R EI ++ L H
Sbjct: 59 SILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSD 116
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+I++ +++VME C +L + ++ + + ++ V H G
Sbjct: 117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
++H DLKP NFL ++ LK IDFG++ +P T
Sbjct: 176 IVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTT 209
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 7e-42
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 11/178 (6%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED---VR 176
G+ + Y LG LG+G FGT F + + A K I + ++ + D
Sbjct: 23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 177 REIRIM---HHLAGHPNVIQIVGAYEDAVAVHVVMEL-CAGGELFDRIIQRGHYTERKAA 232
E+ ++ GHP VI+++ +E +V+E +LFD I ++G E +
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR 142
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL--TF 288
+V ++ CHS GV+HRD+K EN L K IDFG F
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILI--DLRRGCAKLIDFGSGALLHDEPYTDF 198
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 1e-41
Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 14/162 (8%)
Query: 333 DRVIAESLSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQA 390
S EI L E+FK I + + G I EE + L + D +
Sbjct: 35 LLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDL 93
Query: 391 GDIDNSGTMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF-- 447
D ++G + + EF A+ + +D ++ +F +D G+I E++
Sbjct: 94 FDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA 153
Query: 448 ----GLDDTQLED----IIREVDQDNDGRIDYSEFVAMMQDS 481
L DT +ED E D +DG+ID E+ +++
Sbjct: 154 ESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 195
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-41
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+YS+ +++G G F + + ++ +A K + + + ++ R EI ++ L
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQ 65
Query: 187 GH-PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H +I++ +++VME C +L + ++ + + ++ V
Sbjct: 66 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI 124
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
H G++H DLKP NFL ++ LK IDFG++ +P T
Sbjct: 125 HQHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTT 162
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 3e-41
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ L + LG+G +G L V + T++ A K + ++ + E++++EI I L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HE 65
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
NV++ G + ++ +E C+GGELFDRI E A ++ V H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 4e-41
Identities = 31/172 (18%), Positives = 63/172 (36%), Gaps = 31/172 (18%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDG----------LM 388
+ + + AG ++++ D D++GYI +EL + + L + M
Sbjct: 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFM 63
Query: 389 QAGDIDNSGTMDYGEFIAAML-----------HLNKIQREDHMYAAFSYFDKDGSGYITP 437
A D G + E +L + + +D D SGYI+
Sbjct: 64 SAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISA 123
Query: 438 DELQTACQQFGLD----------DTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
EL+ + L D + +++ D++ DGR+D ++ ++
Sbjct: 124 AELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILA 175
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-33
Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR--------VGANLMDSEID 385
R A + E ++++ D D+SGYI+ ELK L+ + N +D D
Sbjct: 95 RREAPLDNSVE---FMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTD 151
Query: 386 GLMQAGDIDNSGTMDYGEFIAAM------------LHLNKIQREDHMYAAFSYFDKDGSG 433
+M+ D + G +D + + ++++R+ F+++D +G
Sbjct: 152 AMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTG 211
Query: 434 YITPDELQTACQQFG------LDDTQLED----IIREVDQDNDGRIDYSEFVAMM 478
+ E+ + + L+ ++ D + DG+I SE +
Sbjct: 212 ALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 5e-41
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 376 GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
L D+++ ++A + + +Y F A + K D + AF D+D SG+I
Sbjct: 4 SGILADADVAAALKACEAA--DSFNYKAFFAKVGLTAK--SADDIKKAFFVIDQDKSGFI 59
Query: 436 TPDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
DEL+ Q F L D + + ++ D D DG I E+ A+++
Sbjct: 60 EEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-17
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR---VGANLMDSEIDGLMQAGDIDNSG 397
S ++ +K+ F +ID D SG+I +ELK LQ L D+E ++AGD D G
Sbjct: 40 SADD---IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDG 96
Query: 398 TMDYGEFIAAM 408
+ E+ A +
Sbjct: 97 AIGVDEWAALV 107
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 6e-41
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y L + +G+G F L T +E A K I K +L ++ + RE+RIM L HP
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILN-HP 74
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ E ++++ME +GGE+FD ++ G E++A R IV V+ CH
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK EN L + +K DFG S F G
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVG 167
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 6e-41
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 14/153 (9%)
Query: 340 LSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ EE+ L E+FK + + + G I EE + L R N + D + D+ +G
Sbjct: 31 FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNR-NRRNLFADRIFDVFDVKRNG 89
Query: 398 TMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------LD 450
+++GEF+ ++ + + + AF +D +G+I +EL+ L
Sbjct: 90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLS 149
Query: 451 DTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
+ +E + D+ NDG+ID E+ +
Sbjct: 150 EDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-40
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y LG LG G FG + + T + A K + ++K+ + + V +RREI+ + HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HP 76
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ + +VME +GGELFD I + G E+++ L + I+ V+ CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
V+HRDLKPEN L K DFGLS G
Sbjct: 137 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG 169
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 3e-40
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ L + LG+G +G L V + T++ A K + ++ + E++++EI I L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HE 65
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
NV++ G + ++ +E C+GGELFDRI E A ++ V H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ HRD+KPEN L E LK DFGL+ FR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 4e-40
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + LG+G FG L TQ++ A K I+++ L + V REI + L HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HP 69
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
++I++ + +V+E AGGELFD I+++ TE + + I+ +E CH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLKPEN L + +K DFGLS G
Sbjct: 129 IVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDG 161
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 7e-40
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE-IDGLMQAGDIDN 395
E LS E + F SG +TL E K+ + ++ ++ + + D +
Sbjct: 8 VEELSATECHQWYKKFM--TECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65
Query: 396 SGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ---TACQQFGLDDT 452
G +D+ E++AA+ + K + + + F +D DG+G I EL A + +
Sbjct: 66 DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125
Query: 453 QL------EDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + ++D + DG + EF+ +Q
Sbjct: 126 AMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-09
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+++MF+ D + GYI E L V +D ++ + D+D +G +D GE +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 408 MLHLNKI-------QREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
+ + I E+ F D +G G ++ +E Q+
Sbjct: 114 IKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-39
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I + A + G+ ++ +F A + K + + F D D SG+I +
Sbjct: 7 LKADDIKKALDA--VKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEE 62
Query: 439 ELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
EL+ + F L D + + ++ D+D DG+I EF ++ ++
Sbjct: 63 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 1e-19
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK---KGLQRVGANLMDSEIDGLMQAG 391
V +++S + +K++FK ID D SG+I EELK K G +L D+E ++A
Sbjct: 34 VGLKAMSAND---VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAA 90
Query: 392 DIDNSGTMDYGEFIAAM 408
D D G + EF +
Sbjct: 91 DKDGDGKIGIDEFETLV 107
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-39
Identities = 29/229 (12%), Positives = 61/229 (26%), Gaps = 36/229 (15%)
Query: 84 NRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKT--GNLKEMYSLGRKLGQGQF 141
R+ +++ + A V+ +++ + + + L L G
Sbjct: 16 KREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDR 75
Query: 142 GTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL---------------- 185
FL + ++FA K + ++E + L
Sbjct: 76 SVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLL 135
Query: 186 -------AGHPNVIQIVGAYED--AVAVHVVMELCAG------GELFDRIIQRGHYTERK 230
P Q+ +D ++M + L + RG
Sbjct: 136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILA 195
Query: 231 AADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
LT ++ + S G++H P+N + L D
Sbjct: 196 LHILTAQLIRLAANLQSKGLVHGHFTPDNLFI---MPDGRLMLGDVSAL 241
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 3e-39
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 376 GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
L +I+ + + + + +Y F + + +K D + F D+D SG+I
Sbjct: 4 TDILSAKDIESALSS--CQAADSFNYKSFFSTVGLSSK--TPDQIKKVFGILDQDKSGFI 59
Query: 436 TPDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ELQ + F L + + + D D DG+I EF ++++
Sbjct: 60 EEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 6e-18
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
LS + +K++F ++D D SG+I EEL+ L+ ++ L +E + AGD D
Sbjct: 36 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 95
Query: 397 GTMDYGEFIAAM 408
G + EF + +
Sbjct: 96 GKIGVEEFQSLV 107
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 7e-39
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + +G G FG L +K T++ A K I + E+V+REI L HP
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLR-HP 76
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N+++ + ++ME +GGEL++RI G ++E +A + ++ V CHS+
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ HRDLK EN L ++ LK DFG S
Sbjct: 137 ICHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLH 171
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 2e-38
Identities = 34/172 (19%), Positives = 76/172 (44%), Gaps = 28/172 (16%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
S+ + L F+ +D + GY++ +L++ + + N + I +++ D S +
Sbjct: 23 FSQASLLRLHHRFRALDRNKKGYLSRMDLQQ-IGALAVNPLGDRI---IESFFPDGSQRV 78
Query: 400 DYGEFIAAMLHLNKIQ-----------------REDHMYAAFSYFDKDGSGYITPDELQT 442
D+ F+ + H ++ R + ++ AF +D D G I+ E+
Sbjct: 79 DFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQ 138
Query: 443 ACQQFG---LDDTQLEDI----IREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487
+ + + QLE+I ++E D+D DG + + EF ++ + +K+
Sbjct: 139 VLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKM 190
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 135 bits (340), Expect = 2e-37
Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 25/166 (15%)
Query: 340 LSEEEIAGLKEMFK-MIDTDNSGYITLEELKKGLQRVGA---------------NLMDSE 383
L++ + +K F +D ++ G I + + + R ++ E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 384 IDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR---------EDHMYAAFSYFDKDGSGY 434
L DI+ + + E++A + ++ + F D G G
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 435 ITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ +E Q C+ F L + + + D + + +
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYYR 167
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 5e-11
Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
L + +FK +D G + LEE + + +++ +
Sbjct: 97 ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQ--CADVPAVYNVITDGGKV 154
Query: 398 TMDYGEFIAAM 408
T D +
Sbjct: 155 TFDLNRYKELY 165
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 2e-09
Identities = 13/108 (12%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANL---------MDSEIDGLMQAGDIDNSGTM 399
+++ D + ++ EE ++ A + I L + D+ G +
Sbjct: 63 RDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIV 122
Query: 400 DYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
D EF + + + A ++ G + + +
Sbjct: 123 DLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLNRYKELYYRL 168
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 1e-08
Identities = 13/96 (13%), Positives = 33/96 (34%), Gaps = 17/96 (17%)
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD-----------------DTQ 453
LN Q++ + + D + G I ++ + ++ + +
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
D+ D + D + + E++AM + + K
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVA 97
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 2e-37
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
S +I L F +D +G ++ E+ ++ + + N + I + A + +
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPE-LAINPLGDRI---INAFFSEGEDQV 78
Query: 400 DYGEFIAAMLHLNKIQ----------------REDHMYAAFSYFDKDGSGYITPDELQTA 443
++ F+ + H I+ R + ++ AF +D D I+ DEL
Sbjct: 79 NFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQV 138
Query: 444 CQQF---GLDDTQLEDI----IREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487
+ + D QL I I+E DQD D I ++EFV +++ + +K+
Sbjct: 139 LRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKM 189
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 2e-37
Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
+ L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 398 TMDYGEFIAAMLHLNKIQREDH---MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
T+D+ EF+ M K++ D + AF FDKDG+GYI+ EL+ G L D
Sbjct: 364 TIDFPEFLTMMAR--KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 421
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+++++IRE D D DG+++Y EFV MM
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMM 447
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
G + + D+ Y T E+K + + ID G +
Sbjct: 241 FKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGID-------FKEDGNI 293
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLED 456
+ L + Q + AFS FDKDG G IT EL T + G + T +L+D
Sbjct: 294 LGHKLEYNTRDQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 352
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+I EVD D +G ID+ EF+ MM
Sbjct: 353 MINEVDADGNGTIDFPEFLTMM 374
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 6e-15
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R + ++ SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DI
Sbjct: 376 RKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 432
Query: 394 DNSGTMDYGEFIAAM 408
D G ++Y EF+ M
Sbjct: 433 DGDGQVNYEEFVQMM 447
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 4e-37
Identities = 29/240 (12%), Positives = 64/240 (26%), Gaps = 46/240 (19%)
Query: 90 PVPQQQQEQSKKPAHVKRISSAGL-------QVGSVLGRKTGNLKEMYSLGRKLGQGQFG 142
P + + + S L +V S LG + L G LGQ
Sbjct: 32 PQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLV----RGTVLGQEDPY 87
Query: 143 TTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA---------------- 186
++ T + F + ++ ++ E+ + L
Sbjct: 88 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147
Query: 187 --------GHPNVIQIVGAYED--AVAVHVVMELCA------GGELFDRIIQRGHYTERK 230
+I++ D ++ + G L
Sbjct: 148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 207
Query: 231 AADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
LT ++ ++ + H G++H L+P + + + + F + + V
Sbjct: 208 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTGFEHLVRDGARVVSSV 264
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 5e-37
Identities = 56/79 (70%), Positives = 65/79 (82%)
Query: 332 GDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG 391
D+ +AE LSEEEI GLKE+FKMIDTDNSG IT +ELK GL+RVG+ LM+SEI LM A
Sbjct: 9 DDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA 68
Query: 392 DIDNSGTMDYGEFIAAMLH 410
DID SGT+DYGEFIAA +H
Sbjct: 69 DIDKSGTIDYGEFIAATVH 87
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 4e-25
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451
+SG +D + A L++ + + F D D SG IT DEL+ ++ G L +
Sbjct: 1 HSSGHIDDDDKHMAE-RLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSELME 58
Query: 452 TQLEDIIREVDQDNDGRIDYSEFVAMM 478
++++D++ D D G IDY EF+A
Sbjct: 59 SEIKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-36
Identities = 29/146 (19%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSG 397
+++++ KE F++ D G I + ++ +G N ++E+ ++ D S
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 398 TMDYGEFIAAMLHLNKIQREDH---MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+D+ F+ + + K + + F FDK+G+G + EL+ G + +
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE 123
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
++E ++ +D++G I+Y F+ +
Sbjct: 124 EVETVLAG-HEDSNGCINYEAFLKHI 148
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 408 MLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD--DTQLEDIIREVDQD- 464
M+ NK Q E+ AF FD+ G G I + + G + + ++ ++ D
Sbjct: 1 MIEFNKDQLEE-FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE 59
Query: 465 -NDGRIDYSEFVAMMQ 479
R+D+ F+ M+Q
Sbjct: 60 LKSRRVDFETFLPMLQ 75
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 15/69 (21%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+ E+ E F++ D + +G + EL+ L +G + + E++ ++ D++G ++
Sbjct: 85 TYEDY---LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCIN 140
Query: 401 YGEFIAAML 409
Y F+ +L
Sbjct: 141 YEAFLKHIL 149
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-36
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 16/145 (11%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDG--------LMQAGDID 394
EE+ + +F + D+ ++ EL L +V D + DG ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT-Q 453
+G + + EF ++ K Q A + FD D SG I EL A + G
Sbjct: 60 TTGKLGFEEFKYLWNNIKKWQ------AIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMM 478
L +I D G +D+ F++ +
Sbjct: 114 LYSMIIRRYSDEGGNMDFDNFISCL 138
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 2e-22
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
I + ++K D D SG I EL + G +L + +++ D G MD+
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRR-YSDEGGNMDFD 132
Query: 403 EFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
FI+ ++ L D M+ AF DKDG+G I + +
Sbjct: 133 NFISCLVRL------DAMFRAFKSLDKDGTGQIQVNIQE 165
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 9e-09
Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 11/85 (12%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLE----------DIIREVDQD 464
+ F+ D ++ EL + L+ ++ +D D
Sbjct: 1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 465 NDGRIDYSEFVAMMQDSGLGKKVFK 489
G++ + EF + + + ++K
Sbjct: 60 TTGKLGFEEFKYLWNNIKKWQAIYK 84
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-36
Identities = 20/142 (14%), Positives = 57/142 (40%), Gaps = 9/142 (6%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
EE++ + + G I+++ +++G + + + +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYG----DNL 64
Query: 400 DYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
Y +++ + + ++ + + F++FD + +GY+T +++ +G L D + D
Sbjct: 65 TYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAID 124
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+ ++ IDY F +
Sbjct: 125 ALNAF--SSEDNIDYKLFCEDI 144
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 3e-14
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
+ + + EE+ +MF D + +GY+T ++K L G L D E +
Sbjct: 75 ICVHDKDNVEEL---IKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALN--AF 129
Query: 394 DNSGTMDYGEFIAAMLH 410
+ +DY F +L
Sbjct: 130 SSEDNIDYKLFCEDILQ 146
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-13
Identities = 7/57 (12%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ +K G I+ D ++ GL + ++ +++ + + Y +++ +
Sbjct: 20 RIYFNEKSSGGKISIDNASYNARKLGLAPSSID--EKKIKELYGDNLTYEQYLEYLS 74
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 4e-36
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG-DIDNSGTMDYG 402
K++F + D G I + L L+ +G N + + ++ A + ++ ++
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61
Query: 403 EFIAAMLHLNK------IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
+ + K + + AF FDK+ +G ++ +L+ G L D ++
Sbjct: 62 QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++++ V+ D++G IDY +F+ +
Sbjct: 122 DELLKGVEVDSNGEIDYKKFIEDV 145
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 2e-15
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 331 IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQA 390
+ E+ + F++ D +++G +++ +L+ L +G L D+E+D L++
Sbjct: 71 EKELDATTKAKTED---FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKG 127
Query: 391 GDIDNSGTMDYGEFIAAML 409
++D++G +DY +FI +L
Sbjct: 128 VEVDSNGEIDYKKFIEDVL 146
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 1e-13
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIR-EVDQDNDGRIDYSEFVAMMQ 479
F+ FDK G G I D L + G + T ++DII + + + + +++
Sbjct: 9 IFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIE 68
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 8e-36
Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 6/190 (3%)
Query: 91 VPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEK 150
Q Q ++ + S G R ++ + +LG G +G F K
Sbjct: 20 FQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSK 79
Query: 151 ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210
+ +A K +D E+ + HP +++ A+E+ +++ EL
Sbjct: 80 EDGRLYAVKRS-MSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL 138
Query: 211 CAGGELFDRIIQRGHY-TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269
C G L G E + R + + HS G++H D+KP N +F+ +
Sbjct: 139 C-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN-IFLGPRGR- 195
Query: 270 PLKTIDFGLS 279
K DFGL
Sbjct: 196 -CKLGDFGLL 204
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 9e-36
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL----------------------- 166
Y+L ++G+G +G L + +A K ++K+KL
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 167 TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV--VMELCAGGELFDRIIQRG 224
+E V +EI I+ L HPNV+++V +D H+ V EL G + + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLK 132
Query: 225 HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
+E +A + ++ +E H ++HRD+KP N L E+ +K DFG+S F+
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEFKG 189
Query: 285 G 285
Sbjct: 190 S 190
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 1e-35
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 340 LSEEEIAGLKEMFKMID--TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
LS++EI LK++F++ D G + +L + +G N + ++ +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEK 61
Query: 398 TMDYGEFIAAMLHLNKIQR--EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
++ + EF+ A L ++ AF FD++G G+I+ EL+ G L D
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 454 LEDIIREVD--QDNDGRIDYSEFVAMM 478
+++II+ D +D +G + Y +FV +
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKV 148
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 1e-13
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--D 394
E + + E FK D + G+I+ EL+ L +G L D ++D +++ D+ D
Sbjct: 78 CEQGTFADY---MEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 134
Query: 395 NSGTMDYGEFIAAMLH 410
G + Y +F+ ++
Sbjct: 135 LEGNVKYEDFVKKVMA 150
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 6e-12
Identities = 9/60 (15%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 423 AFSYFD--KDGSGYITPDELQTACQQFGLDDTQLE-DIIREVDQDNDGRIDYSEFVAMMQ 479
F FD G + +L C+ G++ + + + + + + EF+ +
Sbjct: 14 VFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYE 73
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-35
Identities = 29/146 (19%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSG 397
S+ KE F + D IT ++ + +G N ++EI+ ++ + N+
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 398 TMDYGEFIAAMLHLNK---IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDT 452
+ + EF+ + + FDK+G+G + EL+ G + +
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 121
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
++E++++ + D++G I+Y FV +
Sbjct: 122 EVEELMKGQE-DSNGCINYEAFVKHI 146
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 6e-14
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQD--NDGRIDYSEFVAMM 478
AF FD+ G IT ++ + G + T ++ I+ ++ N I + EF+ M+
Sbjct: 13 AFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPML 72
Query: 479 Q 479
Q
Sbjct: 73 Q 73
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 9e-13
Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+ E+ E ++ D + +G + EL+ L +G + + E++ LM+ G D++G ++
Sbjct: 83 TFEDF---VEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCIN 138
Query: 401 YGEFIAAML 409
Y F+ ++
Sbjct: 139 YEAFVKHIM 147
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-35
Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 17/164 (10%)
Query: 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAG 391
+++E+ L FK SG + E K+ + + L A
Sbjct: 54 LLEAQSKFTKKELQILYRGFKNEC--PSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAF 111
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---- 447
D D++G + + +FI + L + ++ + AF+ +D + GYIT +E+ +
Sbjct: 112 DTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMM 171
Query: 448 ------GLDDTQLED----IIREVDQDNDGRIDYSEFVAMMQDS 481
L + +++D++ DG + EF+ Q
Sbjct: 172 GKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKD 215
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 7e-35
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED-VRREIRIMHHLAGH 188
Y +G LG+G +G ++ T A K + K+KL + E V++EI+++ L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65
Query: 189 PNVIQI--VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
NVIQ+ V E+ +++VME C G E+ D + + + +A ++ +E
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEY 124
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS G++H+D+KP N L LK G++
Sbjct: 125 LHSQGIVHKDIKPGNLLL---TTGGTLKISALGVA 156
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 1e-34
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
++E F++ D DN G +++EEL L+ +G N ++E++ + ++ + D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKG--QLN-AKEFDLA 58
Query: 403 EFIAAMLH--LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDII 458
F ++ M AF DK+G+G I EL+ G L +++E+++
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
Query: 459 REVDQDNDGRIDYSEFVAMM 478
+EV DG I+Y FV M+
Sbjct: 119 KEVSVSGDGAINYESFVDML 138
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 1e-15
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+E+ + F+ +D + +G I EL++ L +G L SE++ LM+ + G ++
Sbjct: 74 QSKEM---LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAIN 130
Query: 401 YGEFIAAMLH 410
Y F+ ++
Sbjct: 131 YESFVDMLVT 140
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 1e-11
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
F FDKD G ++ +EL +A + G + T +L I +++ D + F + +
Sbjct: 10 CFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK---EFDLATFKTVYR 65
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 1e-34
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 19/197 (9%)
Query: 103 AHVKRISSAGLQVGSVLGRKT--GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKS 160
+H S+G + G N Y +KLG+G F L +A K
Sbjct: 4 SHHHHHHSSGRENLYFQGHMVIIDNKH--YLFIQKLGEGGFSYVDLVEGLHDGHFYALKR 61
Query: 161 IAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA----VHVVMELCAGGEL 216
I + ++D E+ +RE + HPN++++V +++ G L
Sbjct: 62 ILCHE---QQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117
Query: 217 FDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272
++ I + TE + L I +EA H+ G HRDLKP N + + + +
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTN-ILLGDEGQ--PV 174
Query: 273 TIDFGLSMFFRPGLTFR 289
+D G +
Sbjct: 175 LMDLGSMNQACIHVEGS 191
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 3e-34
Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 29/181 (16%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--------------TTEEDVEDV 175
Y + R L QG+F LC + K +A K K L + + +D
Sbjct: 33 YRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 176 RREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--------YT 227
+ E++I+ + + + G + V+++ E +
Sbjct: 91 KNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 228 ERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286
+ + + ++ H+ + HRD+KP N L +K DFG S +
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR---VKLSDFGESEYMVDKK 206
Query: 287 T 287
Sbjct: 207 I 207
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 5e-34
Identities = 29/142 (20%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
++ ++ KE F++ID D G+I+ +++ +G + E+D ++ G +
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAP----GPI 106
Query: 400 DYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456
++ F+ + ED + AF+ FD +G G + L+ + +G +++
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 457 IIREVDQDNDGRIDYSEFVAMM 478
+ E D +G ID +F ++
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQIL 187
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 5e-13
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
IA + E+ I F + D + G E LK+ L G E+D + I
Sbjct: 117 DRIAGTDEEDVI---VNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPI 172
Query: 394 DNSGTMDYGEFIAAMLH 410
D +G +D +F +
Sbjct: 173 DGNGLIDIKKFAQILTK 189
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 5e-11
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
AF D+D G+I+ ++++ G T+ E + + + G I+++ F+ +
Sbjct: 62 AFQLIDQDKDGFISKNDIRATFDSLGRLCTEQE--LDSMVAEAPGPINFTMFLTIFG 116
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-33
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
+E EI + F SG++++EE KK S+ + + + D + GT
Sbjct: 22 FTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGT 79
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT----------ACQQFG 448
+D+ EFI A+ ++ + E + AFS +D DG+GYI+ E+ + +
Sbjct: 80 IDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMP 139
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
D++ E I R++D + DG++ EF+ +
Sbjct: 140 EDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-07
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 12/111 (10%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+ +F+ D + G I E L ++ ++ D+D +G + E +
Sbjct: 65 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEI 124
Query: 408 MLHLNKI------------QREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
+ + K+ E F D + G ++ +E +
Sbjct: 125 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-33
Identities = 43/165 (26%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 119 LGRKTGNLKEM--YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR 176
LG + + M Y +K+G+G FG L +++ K I ++ + ++ E+ R
Sbjct: 13 LGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESR 71
Query: 177 REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADL 234
RE+ ++ ++ HPN++Q ++E+ ++++VM+ C GG+LF RI + + E + D
Sbjct: 72 REVAVLANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
I ++ H ++HRD+K +N +F+ + ++ DFG++
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQN-IFLTKDGT--VQLGDFGIA 172
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-33
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E Y + +G G +G K+ K K + + TE + + + E+ ++ L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK- 63
Query: 188 HPNVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGV 241
HPN+++ D +++VME C GG+L I + R + E + +
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 242 VEACHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ CH V+HRDLKP N +F++ ++ +K DFGL+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLA 163
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 6e-33
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 16/138 (11%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN-----LMDSEIDGLMQAGDIDNSGTMDYG 402
L F + G I +EL++ L + G ++ D D SGTM +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 403 EFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIRE 460
EF LN + F FD D SG + P ELQ A G L+ + I +
Sbjct: 63 EFKELWAVLNGWR------QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR 116
Query: 461 VDQDNDGRIDYSEFVAMM 478
G+I + +++A
Sbjct: 117 Y--STSGKITFDDYIACC 132
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-18
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+ G ++ F D+D SG + +EL+K L +G L ++ + + SG + + ++
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAK--RYSTSGKITFDDY 128
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
IA + L + +F D G +
Sbjct: 129 IACCVKLRA------LTDSFRRRDSAQQGMVN 154
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 5e-10
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 424 FSYFDK--DGSGYITPDELQTACQQFGLDDTQ-------LEDIIREVDQDNDGRIDYSEF 474
+ YF G I DELQ Q G+ ++ +D+D G + ++EF
Sbjct: 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF 64
Query: 475 VAMMQDSGLGKKVFK 489
+ ++ F
Sbjct: 65 KELWAVLNGWRQHFI 79
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-32
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
+ + K+ F + D +G I + L+ G N +EI + + +D
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDME 57
Query: 403 EFIAAMLHLNKIQREDH---MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI 457
+F+ + N F FDKD +G I EL+ G L + +++++
Sbjct: 58 QFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDEL 117
Query: 458 IREVDQDNDGRIDYSEFVAMM 478
++ V DG ++Y +FV M+
Sbjct: 118 LKGVP-VKDGMVNYHDFVQMI 137
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
AFS FD+ G+G I + + G + T E I E++ +D +F+ ++
Sbjct: 10 AFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE--ITEIESTLPAEVDMEQFLQVLN 64
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 3e-13
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
EE + F++ D D +G I + EL+ L +G L + E+D L++ + + G ++
Sbjct: 74 DPEEF---VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKD-GMVN 129
Query: 401 YGEFIAAML 409
Y +F+ +L
Sbjct: 130 YHDFVQMIL 138
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 3e-32
Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 42/254 (16%)
Query: 60 TAPAPAPTPTPIQSTPPPPVKIN----NNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQV 115
++ P I P I +P + P + Q K PA + Q+
Sbjct: 6 SSLGTVDAPNFIVGNPWDDKLIFKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTE---FQL 62
Query: 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEE 170
GS ++ + LG+G F + + +++F K
Sbjct: 63 GS----------KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---W 109
Query: 171 DVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERK 230
+ + + + ++ A+ +V EL + G L + I + E+
Sbjct: 110 EFYIGTQLMERLKPSM-QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKV 168
Query: 231 -----AADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP--------LKTIDFG 277
++ ++E H ++H D+KP+NF+ N E L ID G
Sbjct: 169 MPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG 228
Query: 278 LS---MFFRPGLTF 288
S F G F
Sbjct: 229 QSIDMKLFPKGTIF 242
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 6e-32
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
++E+ + F SG++ E +K ++ S + + D D +G
Sbjct: 22 FDKKELQQWYKGFF--KDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGY 79
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT----------ACQQFG 448
+D+ EFI A+ ++ + D + AF +D D +G I+ DE+ + +
Sbjct: 80 IDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLP 139
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
D+ E I +D++ DG++ EF +
Sbjct: 140 EDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 3e-07
Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM-- 408
+F + D D +GYI +E L ++ ++ Q D+DN+G + Y E + +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
Query: 409 ----------LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
L ++ E + F+ DK+ G +T +E ++
Sbjct: 128 IYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-31
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + +K+G+GQF + A K + L + D +EI ++ L HP
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HP 92
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG----HYTERKAADLTRIIVGVVEAC 245
NVI+ ++ + +++V+EL G+L I ER + +E
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS VMHRD+KP N +FI +K D GL
Sbjct: 153 HSRRVMHRDIKPAN-VFITATGV--VKLGDLGLG 183
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-31
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 376 GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYI 435
L S+I ++ D + +F K + F D D SG+I
Sbjct: 3 TDILSPSDIAAALR--DCQAPDSFSPKKFFQISGMSKK--SSSQLKEIFRILDNDQSGFI 58
Query: 436 TPDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
DEL+ Q+F L ++ + + D D DG+I EF M+Q
Sbjct: 59 EEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 6e-25
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAGDIDNS 396
+S++ + LKE+F+++D D SG+I +ELK LQR + L SE + A D D
Sbjct: 35 MSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGD 94
Query: 397 GTMDYGEFIAAM 408
G + EF +
Sbjct: 95 GKIGAEEFQEMV 106
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-31
Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 29/168 (17%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ +G G FG F + K + K + E RE++ + L H
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD-HV 64
Query: 190 NVIQIVGAYEDAVA----------------VHVVMELCAGGELFDRIIQR--GHYTERKA 231
N++ G ++ + + ME C G L I +R + A
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 232 ADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+L I V+ HS +++RDLKP N +F+ ++ +K DFGL
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSN-IFLVDTKQ--VKIGDFGLV 169
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 7e-31
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + LG+G FG F K +A K I R E E V RE++ + L HP
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAKLE-HP 63
Query: 190 NVIQIVGAYED------------AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI 237
+++ A+ + V +++ M+LC L D + R ER+ + I
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 238 IVGVVEA---CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ + EA HS G+MHRDLKP N +F + +K DFGL
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSN-IFFTMDDV--VKVGDFGLV 165
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 4e-30
Identities = 42/196 (21%), Positives = 77/196 (39%), Gaps = 24/196 (12%)
Query: 109 SSAGLQVGSVLGRK--TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL 166
++G +G+ G L+ + R L +G F + + + +E+A K + +
Sbjct: 9 GASGRDQSDFVGQTVELGELR--LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE- 65
Query: 167 TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA--------VHVVMELCAGGELFD 218
EE + +E+ M L+GHPN++Q A ++ ELC G+L +
Sbjct: 66 --EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVE 122
Query: 219 RIIQR---GHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKT 273
+ + G + + V+ H ++HRDLK EN L + +K
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL---LSNQGTIKL 179
Query: 274 IDFGLSMFFRPGLTFR 289
DFG + +
Sbjct: 180 CDFGSATTISHYPDYS 195
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 9e-30
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I +Q + T + +F L+K+ + F + D D SGY+ D
Sbjct: 6 LSAEDIAAALQE--CQDPDTFEPQKFFQTS-GLSKMSASQ-VKDIFRFIDNDQSGYLDGD 61
Query: 439 ELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
EL+ Q+F L +++ + ++ D D DG+I EF M+
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-28
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN---LMDSEIDGLMQAG 391
LS+ + +K++F+ ID D SGY+ +ELK LQ+ ++ L +SE LM A
Sbjct: 30 FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAA 89
Query: 392 DIDNSGTMDYGEFIAAM 408
D D G + EF +
Sbjct: 90 DNDGDGKIGADEFQEMV 106
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 9e-30
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 16/138 (11%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN-----LMDSEIDGLMQAGDIDNSGTMDYG 402
+ F + G + EEL++ L + G N ++ D D++G M +
Sbjct: 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 403 EFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIRE 460
F LN + F D+DGSG + EL+ A G L L I++
Sbjct: 61 AFKELWAALNAWK------ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114
Query: 461 VDQDNDGRIDYSEFVAMM 478
+GRI + ++VA
Sbjct: 115 Y--SKNGRIFFDDYVACC 130
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 2e-18
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+ KE F +D D SG + EL++ + +G L + +++ +G + + ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK--RYSKNGRIFFDDY 126
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
+A + L + F D G
Sbjct: 127 VACCVKL------RALTDFFRKRDHLQQGSAN 152
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-11
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 424 FSYFDK--DGSGYITPDELQTACQQFGLDDTQ-------LEDIIREVDQDNDGRIDYSEF 474
++YF G + +ELQ Q G++ T +I +D+D+ G++ ++ F
Sbjct: 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62
Query: 475 VAMMQDSGLGKKVFK 489
+ K+ F
Sbjct: 63 KELWAALNAWKENFM 77
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 1e-29
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 380 MDSEIDGLMQAGDIDNSGTMDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPD 438
M+ ++ Y + + M ++ + + FS IT +
Sbjct: 1 MEPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAE 60
Query: 439 ELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
L+ G + + ++RE D D DG ++ +EF +M
Sbjct: 61 SLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLM 103
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 8e-15
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGTM 399
E L + F ++ IT E L++ +G + + G+++ GD+D G +
Sbjct: 38 FVSE---LCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGAL 94
Query: 400 DYGEFIAAMLHLNKIQRED 418
+ EF M+ L+ ED
Sbjct: 95 NQTEFCVLMVRLSPEMMED 113
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-29
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYS 472
E+ + AF FD +G G I DE + Q+ G L D ++E+ ++E D+D +G ID
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIP 65
Query: 473 EFVAMMQ 479
EF+ +++
Sbjct: 66 EFMDLIK 72
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 4e-19
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-DSEIDGLMQAGDIDNSGT 398
+ +++ + FK+ D + G I +E K +Q+VG + D+E++ M+ D D +G
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 399 MDYGEFIAAMLHLNKIQRE 417
+D EF+ + +E
Sbjct: 62 IDIPEFMDLIKKSKNALKE 80
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 7e-29
Identities = 27/155 (17%), Positives = 60/155 (38%), Gaps = 17/155 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
+++E+ L FK +G + + K + + L A D D +G
Sbjct: 88 FTKKELQSLYRGFKNEC--PTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGA 145
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQ----------QFG 448
+ + +F+ + L + + + AF+ +D + G IT +E+ +
Sbjct: 146 IHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPI 205
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
L + + +++D++ DG + EF+ Q
Sbjct: 206 LREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 6e-07
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 12/108 (11%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM-- 408
+F D D +G I E+ GL + + ++ DI+ G + E +A M
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 409 ----------LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
L + +H+ F D++ G +T DE CQ+
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 8e-29
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
+ K+G G+FG+ F CV++ +A K K+ L D ++ RE+
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAV 66
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVG 240
L H +V++ A+ + + + E C GG L D I + ++ E + DL +
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+ HS+ ++H D+KP N +FI++ + + + + F+
Sbjct: 127 GLRYIHSMSLVHMDIKPSN-IFISRTSIPNAASEEGDEDDWASNKVMFK 174
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 8e-29
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
+ + AF FD+DG G+IT DEL+ A G L +L+ +IRE D D DGR++Y EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 475 VAMMQ 479
M+
Sbjct: 65 ARMLA 69
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 79.8 bits (198), Expect = 6e-19
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+ + L+ F+ D D G+IT++EL++ + +G L E+D +++ D+D G ++
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 401 YGEFIAAM 408
Y EF +
Sbjct: 61 YEEFARML 68
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-28
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I + A + + D+ +F + K + D + F DKD SG+I D
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEED 61
Query: 439 ELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
EL + + F L + + ++ D+D DG+I EF ++ +S
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 1e-24
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR---VGANLMDSEIDGLMQAGDIDN 395
L ++ +K++F ++D D SG+I +EL L+ +L E LM AGD D
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 93
Query: 396 SGTMDYGEFIAAM 408
G + EF +
Sbjct: 94 DGKIGVEEFSTLV 106
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-28
Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 16/149 (10%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-----LMDSEIDGLMQAG 391
+ + L F G I +EL++ L + G ++
Sbjct: 24 GPAFPGQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML 82
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--L 449
D D SGTM + EF LN + F FD D SG + P ELQ A G L
Sbjct: 83 DRDMSGTMGFNEFKELWAVLNGWR------QHFISFDTDRSGTVDPQELQKALTTMGFRL 136
Query: 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
+ I + +G+I + +++A
Sbjct: 137 SPQAVNSIAKRY--STNGKITFDDYIACC 163
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 2e-16
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
+ G ++ F DTD SG + +EL+K L +G L ++ + + +G + + ++
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK--RYSTNGKITFDDY 159
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
IA + L + +F D G +
Sbjct: 160 IACCVKLRA------LTDSFRRRDTAQQGVVN 185
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-11
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ-------LEDIIREVDQDNDG 467
Q +D +Y F+ G I DELQ Q G+ ++ +D+D G
Sbjct: 30 QTQDPLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 88
Query: 468 RIDYSEFVAMMQDSGLGKKVFK 489
+ ++EF + ++ F
Sbjct: 89 TMGFNEFKELWAVLNGWRQHFI 110
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 27/230 (11%), Positives = 61/230 (26%), Gaps = 46/230 (20%)
Query: 90 PVPQQQQEQSKKPAHVKRISSAGL-------QVGSVLGRKTGNLKEMYSLGRKLGQGQFG 142
P + + + S L +V S LG + L G LGQ
Sbjct: 37 PQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLV----RGTVLGQEDPY 92
Query: 143 TTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA---------------- 186
++ T + F + ++ ++ E+ + L
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 187 --------GHPNVIQIVGAYED--AVAVHVVMELCAG------GELFDRIIQRGHYTERK 230
+I++ D ++ + L
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 231 AADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
LT ++ ++ + H G++H L+P + + + + F +
Sbjct: 213 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTGFEHLV 259
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-27
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 410 HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDG 467
H++ E+ + AF FDKD +GYI+ EL+ G L D ++E +I+E D D DG
Sbjct: 2 HMDT-DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 60
Query: 468 RIDYSEFVAMM 478
+++Y EFV MM
Sbjct: 61 QVNYEEFVKMM 71
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 1e-20
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ + LKE FK+ D D +GYI+ EL+ + +G L D E++ +++ D+D G +
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQV 62
Query: 400 DYGEFIAAMLHLNKIQREDH---MYAAFS 425
+Y EF+ M+ + + + FS
Sbjct: 63 NYEEFVKMMMTVRGGGGGNGWSRLRRKFS 91
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 6e-27
Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 17/157 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
++ E+ L FK + SG + E K+ + + S L A D +G+
Sbjct: 15 FTKRELQVLYRGFK--NEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---------- 448
+ + +F+ A+ L + + + F+ +D + GYI +E+ +
Sbjct: 73 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 132
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQDS 481
L + +++D++ DG + EF+ Q+
Sbjct: 133 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED 169
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-26
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE+ +KE F + DT+ +G I ELK ++ +G ++ EI LM D + +G +
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 400 DYGEFIAAMLHLNKIQRED 418
+ +F+ M KI+ D
Sbjct: 61 GFDDFLDIMTE--KIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 4e-20
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD--DTQLEDIIREVDQDNDGR 468
L++ Q+++ + AF FD + +G I EL+ A + G D ++ +++ E D++ +G
Sbjct: 1 LSEEQKQE-IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGY 59
Query: 469 IDYSEFVAMM 478
I + +F+ +M
Sbjct: 60 IGFDDFLDIM 69
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 5e-26
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 400 DYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDI 457
GE + + E+ + AF DKDG+GYI+ EL+ G L D +++++
Sbjct: 11 SSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 70
Query: 458 IREVDQDNDGRIDYSEFVAMM 478
IRE D D DG+++Y EFV MM
Sbjct: 71 IREADIDGDGQVNYEEFVQMM 91
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 9e-18
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
++ ++ SEEE ++E F++ D D +GYI+ EL+ + +G L D E+D +++ DI
Sbjct: 20 SLMKDTDSEEE---IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 76
Query: 394 DNSGTMDYGEFIAAM 408
D G ++Y EF+ M
Sbjct: 77 DGDGQVNYEEFVQMM 91
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 5e-26
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 17/157 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
++ E+ L FK SG + E K+ + + S L A D +G+
Sbjct: 48 FTKRELQVLYRGFKNEC--PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 105
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF----------G 448
+ + +F+ A+ L + + + F+ +D + GYI +E+ +
Sbjct: 106 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 165
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQDS 481
L + +++D++ DG + EF+ Q+
Sbjct: 166 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED 202
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 5e-26
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ G+ LG+G F T L E AT +E+A K + KR + E V V RE +M L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEAC 245
+++ ++D ++ + GEL I + G + E TR IV +E
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE----TCTRFYTAEIVSALEYL 146
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H G++HRDLKPEN L E+ ++ DFG +
Sbjct: 147 HGKGIIHRDLKPENILL---NEDMHIQITDFGTA 177
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 6e-26
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEF 474
+ + + F+ D + SG + +E + C + + E + + +D D DG I + EF
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEF 83
Query: 475 VAMMQ 479
Sbjct: 84 ARGFL 88
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 5e-21
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
EE+A L+ +F D + SG + EE + + + ++ + + Q D
Sbjct: 15 YFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDA 72
Query: 394 DNSGTMDYGEFIAAM 408
D G + + EF
Sbjct: 73 DRDGAITFQEFARGF 87
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 37.3 bits (87), Expect = 9e-04
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373
+ + + +F+ +D D G IT +E +G
Sbjct: 58 VRPAD---AEAVFQRLDADRDGAITFQEFARGFL 88
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 1e-25
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG-LDDTQLEDIIREVDQDNDGRIDYSEFV 475
D M F FD +G G I+ EL A + G +++ ++ E+D D DG ID++EF+
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 476 AMMQ-DSGLGKKVFK 489
+ + GL K V K
Sbjct: 62 SFCNANPGLMKDVAK 76
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 3e-16
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
++ ++ +FK DT+ G I+L EL L+ +G+ D E+ +M D D G +D+
Sbjct: 2 ADD---MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDF 57
Query: 402 GEFIAAMLHLNKIQREDHMYAAF 424
EFI+ + F
Sbjct: 58 NEFISFC--NANPGLMKDVAKVF 78
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-25
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 17/155 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
EI + F SG + E+ K ++ + + L D DN+G
Sbjct: 22 FDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGF 79
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT----------ACQQFG 448
+ + EFI + ++ E+ + AF +D + GYIT DE+ T +
Sbjct: 80 IHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLN 139
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
D+ E I + +D++ DG I EF +
Sbjct: 140 EDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM-- 408
+F + D DN+G+I EE L ++ ++ + D+++ G + + E + +
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 409 ----------LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
L+ ++ E + F DK+ GYIT DE + +
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 99.1 bits (247), Expect = 2e-25
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVD 462
I A LH + F FD + I+ +E + C + L D Q + + E+
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 463 QDNDGRIDYSEFVAMM 478
+ GR+ Y +F++
Sbjct: 71 VNAKGRLKYPDFLSRF 86
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 7e-20
Identities = 14/67 (20%), Positives = 27/67 (40%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
+ + F+ DT + I+ EE + R L D + D L ++ G + Y
Sbjct: 20 TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 79
Query: 402 GEFIAAM 408
+F++
Sbjct: 80 PDFLSRF 86
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-25
Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 17/155 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
+E+E+ + F SG + +K ++ ++ + D + G
Sbjct: 22 FTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGR 79
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT----------ACQQFG 448
+++ EFI A+ ++ ++ + AF +D D GYIT +E+ +
Sbjct: 80 IEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELP 139
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
++ E I +D++ DG++ EF +
Sbjct: 140 EEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 174
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 3e-07
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM-- 408
+F + D + G I E + L +D ++ + D+DN G + E + +
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 409 ----------LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
L + E + F+ DK+ G +T E Q +
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 5e-25
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
SEEE+ + F +G IT ++ + + + + ++ D + GT
Sbjct: 30 FSEEELCSWYQSFL--KDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGT 87
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQ------------Q 446
+D+ E++ A+ + + AFS +D DG+G I+ +E+
Sbjct: 88 LDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKL 147
Query: 447 FGLDDTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
D+ E I + +++D ++ EF+
Sbjct: 148 LPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 2e-07
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 14/110 (12%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
+F+ D++ G + +E L A + +++ D+D +GT+ E + ++
Sbjct: 76 VFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135
Query: 411 LNKI--------------QREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
+ K+ E + YF K+ +T E
Sbjct: 136 IFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA 185
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-24
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIM 182
G+ + + K+G+G G L EK + ++ A K + L ++ E + E+ IM
Sbjct: 40 QGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIM 96
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
H NV+++ +Y + V+ME GG L D I+ + E + A + ++ +
Sbjct: 97 RDYQ-HFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQAL 154
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H+ GV+HRD+K ++ L + +K DFG
Sbjct: 155 AYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFC 188
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-24
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIM 182
G+ K+ Y+ K+GQG GT + ++ AT +E A + + L + E + EI +M
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM 71
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
+PN++ + +Y + VVME AGG L D ++ E + A + R + +
Sbjct: 72 RENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 129
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
E HS V+HRD+K +N L + +K DFG
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFC 163
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 6e-24
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 16/208 (7%)
Query: 72 QSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYS 131
P + + P+P + S K V + + ++++S
Sbjct: 10 HDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFF------------KDDPEKLFS 57
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
R++G G FG + + + A K ++ + E +D+ +E+R + L HPN
Sbjct: 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNT 116
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
IQ G Y +VME C G + + E + A +T + + HS ++
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRD+K N L E +K DFG +
Sbjct: 177 HRDVKAGNILL---SEPGLVKLGDFGSA 201
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 7e-24
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL-TTEEDVEDVRREIRI 181
+ +E+++ K+G+G FG F ++ TQK A K I L E+++ED+++EI +
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII---DLEEAEDEIEDIQQEITV 73
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ P V + G+Y + ++ME GG D +++ G E + A + R I+
Sbjct: 74 LSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKG 131
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ HS +HRD+K N L E +K DFG++
Sbjct: 132 LDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVA 166
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 2e-23
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+A + ++IA + +FK DT+ G I+ EL L+ +G ++ E+ +M D D
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG 59
Query: 396 SGTMDYGEFIAAMLHLNKIQREDHMYAAF 424
G + + EF + F
Sbjct: 60 DGFISFDEFTDFARA--NRGLVKDVSKIF 86
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 1e-22
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-LDDTQLEDIIREVDQDNDGRIDYSE 473
Q F FD +G G I+ EL A + G + ++ ++ E+D D DG I + E
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 67
Query: 474 FVAMMQ-DSGLGKKVFK 489
F + + GL K V K
Sbjct: 68 FTDFARANRGLVKDVSK 84
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 2e-23
Identities = 49/253 (19%), Positives = 96/253 (37%), Gaps = 16/253 (6%)
Query: 46 ERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPA----PVPQQQQEQSKK 101
ER + +++ A + +S +Q P P ++ + +
Sbjct: 100 ERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRG 159
Query: 102 PAHVKRISSAGLQVGSVLGRKTGNLKEMYSLG-----RKLGQGQFGTTFLCVEKATQKEF 156
K I S + K L ++ R +G+G FG + C + T K +
Sbjct: 160 DVFQKFIESD--KFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMY 217
Query: 157 ACKSIAKRKLTTEEDVEDVRREIRIMH--HLAGHPNVIQIVGAYEDAVAVHVVMELCAGG 214
A K + K+++ ++ E ++ P ++ + A+ + +++L GG
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 215 ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274
+L + Q G ++E I+ +E H+ V++RDLKP N L E ++
Sbjct: 278 DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRIS 334
Query: 275 DFGLSMFFRPGLT 287
D GL+ F
Sbjct: 335 DLGLACDFSKKKP 347
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 2e-23
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE----EDVEDVRREIRIMHHLAG 187
+++G+G FG + A KS+ E E ++ +RE+ IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC-- 245
HPN++++ G + +VME G+L+ R++ + H K + R+++ +
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEY 137
Query: 246 -HSLG--VMHRDLKPENFLFINQQEEAP--LKTIDFGLS 279
+ ++HRDL+ N + E AP K DFGLS
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 3e-23
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
++ L +G G +G + T + A K + T ++ E++++EI ++ +
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYS 78
Query: 187 GHPNVIQIVGAYEDAVAVH------VVMELCAGGELFD--RIIQRGHYTERKAADLTRII 238
H N+ GA+ +VME C G + D + + E A + R I
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ + H V+HRD+K +N L E A +K +DFG+S
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVS 176
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 4e-23
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+ +FK ID + G ++ EE+K + + A + + + ++ D D +G +D EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 408 MLHL 411
+
Sbjct: 62 YGSI 65
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 9e-17
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
A F D +G G ++ +E++ + ++ L+ I + +D D +G ID +EF
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-06
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484
E + +E+D + DG + Y E A +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAI 32
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 5e-23
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
R+ + E++ + +LG G FG + K T A K I + +EE++ED EI
Sbjct: 12 RRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIE 68
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY-TERKAADLTRIIV 239
I+ HP +++++GAY + +++E C GG + +++ TE + + R ++
Sbjct: 69 ILATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 127
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ HS ++HRDLK N L E ++ DFG+S
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVS 164
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 6e-23
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 89 APVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCV 148
A ++ EQ + + L+ + T L + + + LG G FG L
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQ-FDRIKTLGTGSFGRVMLVK 61
Query: 149 EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208
K + +A K + K+K+ + +E E RI+ + P ++++ +++D +++VM
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVM 120
Query: 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268
E AGGE+F + + G ++E A IV E HSL +++RDLKPEN L ++
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQ 177
Query: 269 APLKTIDFGLS 279
++ DFG +
Sbjct: 178 GYIQVTDFGFA 188
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-22
Identities = 50/246 (20%), Positives = 84/246 (34%), Gaps = 20/246 (8%)
Query: 34 PPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQ 93
+ D + L ++ + P KI + P
Sbjct: 264 ISELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTA 323
Query: 94 QQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQ 153
+ + R+ VLG+ G FG L K T
Sbjct: 324 NTISKFDNNGNRDRMKLTDFNFLMVLGK-----------------GSFGKVMLSERKGTD 366
Query: 154 KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAG 213
+ +A K + K + ++DVE E R++ P + Q+ ++ ++ VME G
Sbjct: 367 ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 426
Query: 214 GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273
G+L I Q G + E A I + S G+++RDLK +N + E +K
Sbjct: 427 GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKI 483
Query: 274 IDFGLS 279
DFG+
Sbjct: 484 ADFGMC 489
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 1e-22
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L K+T+K +A K ++K ++ D E IM A P V+Q+
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLF 135
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHSLGVM 251
A++D +++VME GG+L ++ E R +V ++A HS+G +
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPE----KWARFYTAEVVLALDAIHSMGFI 190
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
HRD+KP+N L + LK DFG M R
Sbjct: 191 HRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCD 227
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 2e-22
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--------LDDTQLEDIIREVDQDND 466
+ + + AAF D +G GY+T ELQT +I+ D+++D
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSD 63
Query: 467 GRIDYSEFVAMMQ 479
G+I EF+
Sbjct: 64 GKISKEEFLNANA 76
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 6e-16
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM------DSEIDGLMQAGDI 393
++ + A L+ FK +D + GY+T EL+ + + A L++ D
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 394 DNSGTMDYGEFIAAM 408
++ G + EF+ A
Sbjct: 61 NSDGKISKEEFLNAN 75
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 3e-22
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR-REIRIMHHLAGH 188
+ ++G+G FG +K T + A K + +E R E+ L+
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV---------RLEVFRVEELVACAGLS-S 109
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL 248
P ++ + GA + V++ MEL GG L I Q G E +A + +E H+
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++H D+K +N L + A DFG +
Sbjct: 170 RILHGDVKADNVLLSSDGSRA--ALCDFGHA 198
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 3e-22
Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
R +G+G FG + + T+K +A K + K+K +V +V +E++IM L HP ++
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVN 79
Query: 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHSLG 249
+ +++D + +V++L GG+L + Q H+ E + ++ +V ++ +
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE----ETVKLFICELVMALDYLQNQR 135
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRD+KP+N L E + DF ++
Sbjct: 136 IIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRE 168
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 3e-22
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
+ +G+G FG KA + K +A +++ +E + + E+R + + HPN+
Sbjct: 12 VEEVVGRGAFGVVC----KAKWRA---KDVAIKQIESESERKAFIVELRQLSRVN-HPNI 63
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC---HSL 248
+++ GA + V + VME GG L++ + AA + + HS+
Sbjct: 64 VKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 249 ---GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLKP N L + LK DFG +
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGT--VLKICDFGTA 153
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 9e-22
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G + L K T + +A K + K + +ED++ V+ E + + HP ++ +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ + V+E GG+L + ++ E A + I + H G+++RDL
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 136
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K +N L E +K D+G+
Sbjct: 137 KLDNVLL---DSEGHIKLTDYGMC 157
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 9e-22
Identities = 40/198 (20%), Positives = 85/198 (42%), Gaps = 4/198 (2%)
Query: 82 NNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQF 141
+++ P + Q + ++ A S + L++ + L R +G+G +
Sbjct: 7 HHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQD-FDLLRVIGRGSY 65
Query: 142 GTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201
L K T + +A + + K + +ED++ V+ E + + HP ++ + ++
Sbjct: 66 AKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 125
Query: 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFL 261
+ V+E GG+L + ++ E A + I + H G+++RDLK +N L
Sbjct: 126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 185
Query: 262 FINQQEEAPLKTIDFGLS 279
E +K D+G+
Sbjct: 186 L---DSEGHIKLTDYGMC 200
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-21
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVI 192
LG+G +G + + + Q A K I + + EI + HL H N++
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLK-HKNIV 82
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH----YTERKAADLTRIIVGVVEACHSL 248
Q +G++ + + + ME GG L +++ E+ T+ I+ ++ H
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+K +N L LK DFG S
Sbjct: 142 QIVHRDIKGDNVLINT--YSGVLKISDFGTS 170
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 1e-21
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 22/188 (11%)
Query: 93 QQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKAT 152
Q + ++ + S +E++ + KLG+G +G+ + + K T
Sbjct: 6 QLRNPPRRQLKKLDEDSLTK------------QPEEVFDVLEKLGEGSYGSVYKAIHKET 53
Query: 153 QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212
+ A K + E D++++ +EI IM P+V++ G+Y + +VME C
Sbjct: 54 GQIVAIKQVP-----VESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYCG 107
Query: 213 GGELFDRIIQRGHY-TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
G + D I R TE + A + + + +E H + +HRD+K N L E
Sbjct: 108 AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHA 164
Query: 272 KTIDFGLS 279
K DFG++
Sbjct: 165 KLADFGVA 172
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 2e-21
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
++ Y L +G G +++ A K I K + ++++ +EI+ M
Sbjct: 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQCH 71
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV--EA 244
HPN++ ++ + +VM+L +GG + D I E K+ L + + E
Sbjct: 72 -HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 245 C------HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
H G +HRD+K N L E+ ++ DFG+S
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS 168
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 2e-21
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
+ ++ +LG +G G G + + T A K + R+ +E+ + + ++ ++
Sbjct: 23 EINDLENLGE-MGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLK 79
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
P ++Q G + V + MEL + +G ER +T IV +
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 245 CHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
GV+HRD+KP N L ++++ + K DFG+S
Sbjct: 140 LKEKHGVIHRDVKPSNIL-LDERGQI--KLCDFGIS 172
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 2e-21
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + R LG G FG L + + +A K + K + + VE E ++ + HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 66
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEAC 245
+I++ G ++DA + ++M+ GGELF + + + + + + +E
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN----PVAKFYAAEVCLALEYL 122
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
HS +++RDLKPEN L + +K DFG +
Sbjct: 123 HSKDIIYRDLKPENILL---DKNGHIKITDFGFA 153
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 5e-21
Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 25/164 (15%)
Query: 131 SLGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
+ KL + G + K + K + R + D E + + H
Sbjct: 13 NFLTKLNENHSGELW----KGRWQGNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFS-H 66
Query: 189 PNVIQIVGAYEDAVAVH--VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC- 245
PNV+ ++GA + A H ++ G L++ + H D ++ + ++
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL----HEGTNFVVDQSQAVKFALDMAR 122
Query: 246 -----HSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
H+L + L + + I+ E+ + + F
Sbjct: 123 GMAFLHTLEPLIPRHALNSRS-VMID--EDMTARISMADVKFSF 163
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 1e-20
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ FD +G+G I L+ ++ G+ T +L+ +I EV + Y +F+ MM
Sbjct: 37 KYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-20
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ ++ ++ G KE + D + +G I + LK+ L+++G E+ L+
Sbjct: 19 PKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVS 78
Query: 393 IDNSGTMDYGEFIAAM 408
+ T Y +F+ M
Sbjct: 79 SGSGETFSYPDFLRMM 94
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI----AKRKLTTEEDVEDVRREIRIMHHL 185
Y L RKLG+G++ F + ++ K + K+ REI+I+ +L
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK----------REIKILENL 87
Query: 186 AGHPNVIQ---IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
G PN+I IV V + F ++ Q T+ I+ +
Sbjct: 88 RGGPNIITLADIVKDPVSRTPALVFEHV--NNTDFKQLYQT--LTDYDIRFYMYEILKAL 143
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG--LTFRV---WLR 293
+ CHS+G+MHRD+KP N + I+ E L+ ID+GL+ F+ PG RV + +
Sbjct: 144 DYCHSMGIMHRDVKPHNVM-ID-HEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 197
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 1e-20
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYS 472
++ + FD + G I L+ ++ G+ T +++ +I EV I Y
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 473 EFVAMMQ 479
+FV MM
Sbjct: 107 DFVNMML 113
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 2e-19
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E E++ KE + D +N G I L LK+ ++++G E+ ++
Sbjct: 37 QKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVT 96
Query: 393 IDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSG 433
S T+ Y +F+ ML + + F+ +
Sbjct: 97 GGVSDTISYRDFVNMML-----GKRSAVLKLVMMFEGKANE 132
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-20
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K T + +A K + K + ++DVE E R++ P + Q+
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ ++ VME GG+L I Q G + E A I + S G+++RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K +N + E +K DFG+
Sbjct: 148 KLDNVML---DSEGHIKIADFGMC 168
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 1e-20
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 132 LGRKLGQGQFGTTFLCVEKAT-QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
+G +G+G+FG + E A + I + E+ ++ +RE+ H N
Sbjct: 37 IGELIGKGRFGQVY----HGRWHGEVAIRLI-DIERDNEDQLKAFKREVMAYRQTR-HEN 90
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACHSLG 249
V+ +GA + ++ LC G L+ + + K + + IV + H+ G
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++H+DLK +N + + + DFGL
Sbjct: 151 ILHKDLKSKNVFY----DNGKVVITDFGLF 176
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-20
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L K T +A K + K + ++DVE E RI+ HP + Q+
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ + VME GG+L I + + E +A I+ + H G+++RDL
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDL 150
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K +N L E K DFG+
Sbjct: 151 KLDNVLL---DHEGHCKLADFGMC 171
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 2e-20
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
F FDK+ G ++ DE + F + E+D D +G ++ EF + ++
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 83.7 bits (208), Expect = 3e-20
Identities = 12/63 (19%), Positives = 29/63 (46%)
Query: 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFI 405
+ K +F+ D + G ++L+E ++ +I + D+D +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 406 AAM 408
+ +
Sbjct: 61 SCI 63
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 2e-20
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG L EKAT + +A K + K + +++V E R++ + HP + +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
A++ + VME GGELF + + +TE +A IV +E HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K EN + ++ +K DFGL
Sbjct: 132 KLENLML---DKDGHIKITDFGLC 152
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 2e-20
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 7/153 (4%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+ + +LG G G F K + A K I + RE++++H
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVLHECN- 89
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P ++ GA+ + + ME GG L + + G E+ ++ ++ +
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 248 -LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+MHRD+KP N L +N + E K DFG+S
Sbjct: 150 KHKIMHRDVKPSNIL-VNSRGEI--KLCDFGVS 179
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 2e-20
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG FL K T + FA K++ K + ++DVE E R++ HP + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
++ + VME GG+L I + +A I+ ++ HS G+++RDL
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL 144
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
K +N L ++ +K DFG+
Sbjct: 145 KLDNILL---DKDGHIKIADFGMC 165
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 2e-20
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG + K K FA K + K ++ + R E ++ + + +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLH 140
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRI----IVGVVEACHSLGV 250
A++D +++VM+ GG+L + + E ++ R +V +++ H L
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE----EMARFYLAEMVIAIDSVHQLHY 196
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+HRD+KP+N L ++ DFG +
Sbjct: 197 VHRDIKPDNILM---DMNGHIRLADFGSCL 223
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 3e-20
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 132 LGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ K+G G FGT +A + A K + ++ E V + RE+ IM L HP
Sbjct: 41 IKEKIGAGSFGTVH----RAEWHGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLR-HP 94
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC---H 246
N++ +GA + +V E + G L+ + + G + + V + H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 247 SLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HR+LK N L ++++ +K DFGLS
Sbjct: 155 NRNPPIVHRNLKSPN-LLVDKKYT--VKVCDFGLS 186
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 3e-20
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G F + K T + +A K + K + +V R E ++ + + Q+
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQLH 127
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRD 254
A++D +++VME GG+L + + G A IV +++ H LG +HRD
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRD 187
Query: 255 LKPENFLFINQQEEAPLKTIDFGLSM 280
+KP+N L ++ DFG +
Sbjct: 188 IKPDNILL---DRCGHIRLADFGSCL 210
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 3e-20
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
LG+G FG C +AT K +ACK + K+++ + E +I+ V+ +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-EKVNSRFVVSLA 250
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHR 253
AYE A+ +V+ L GG+L I G + E +A I +E H +++R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 254 DLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
DLKPEN L + ++ D GL++ G T
Sbjct: 311 DLKPENILL---DDHGHIRISDLGLAVHVPEGQT 341
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
++G+G +G+ V K + + A K I R E++ + + ++ ++ + P ++Q
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAD---LTRIIVGVVEACHSL--- 248
GA + MEL + FD+ + + L +I + V+A + L
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 249 -GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRD+KP N L +++ K DFG+S
Sbjct: 145 LKIIHRDIKPSNIL-LDRSGNI--KLCDFGIS 173
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 4e-20
Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 25/161 (15%)
Query: 340 LSEEEIAGLKEMFK--------MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG 391
L+++EI F +++ + E++ + + AN I +
Sbjct: 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE-LKANPFKERI---CRVF 69
Query: 392 DIDNS-GTMDYGEFIAAMLHLNKI-QREDHMYAAFSYFDKDGSGYITPDELQTACQQF-- 447
+ ++ + +F+ + + + + AF FD D G + ++L
Sbjct: 70 STSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG 129
Query: 448 -----GLDDTQLEDI----IREVDQDNDGRIDYSEFVAMMQ 479
L ++++ + + E D D DG I+ SEF ++
Sbjct: 130 EGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 170
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 3e-05
Identities = 15/99 (15%), Positives = 27/99 (27%), Gaps = 27/99 (27%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
F++ D D+ G + E+L + + L D
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVN----CLTGEGED---------------------- 133
Query: 408 MLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
L+ + + + D D G I E Q +
Sbjct: 134 -TRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 171
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 5e-20
Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 15/248 (6%)
Query: 40 EPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQS 99
+ +D+ R KA+ A A T + P+ +
Sbjct: 96 DTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVAR-ARAGAGDGLFQPLLRAVLAHL 154
Query: 100 KKPAHVKRISSA----GLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKE 155
+ + + S LQ + + G ++ + R LG+G FG F C KAT K
Sbjct: 155 GQAPFQEFLDSLYFLRFLQWKWLEAQPMG--EDWFLDFRVLGRGGFGEVFACQMKATGKL 212
Query: 156 FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGE 215
+ACK + K++L + + E +I+ ++ + A+E + +VM + GG+
Sbjct: 213 YACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGD 271
Query: 216 LFDRIIQRGHYTERKAADLTRI----IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
+ I IV +E H +++RDLKPEN L ++ +
Sbjct: 272 IRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNV 328
Query: 272 KTIDFGLS 279
+ D GL+
Sbjct: 329 RISDLGLA 336
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 5e-20
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDD 451
+ N +D ++ +K++ + FD +G+G I L+ ++ G+
Sbjct: 25 EGINKQFLDDPKYSNDEDLPSKLE---AFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPK 81
Query: 452 T--QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
T +L+ +IREV ++ YS+F+ MM
Sbjct: 82 THLELKRLIREVSSGSEETFSYSDFLRMML 111
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 3e-18
Identities = 15/105 (14%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ + ++ K + D + +G I + LK+ L+++G E+ L++
Sbjct: 35 PKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVS 94
Query: 393 IDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITP 437
+ T Y +F+ M + + + +++ + P
Sbjct: 95 SGSEETFSYSDFLRMM-----LGKRSAILRMILMYEEKNKEHKRP 134
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 6e-20
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 14/152 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
G LG+G FG + T + K + + EE +E+++M L HPNV
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPNV 69
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEAC---HS 247
++ +G ++ + E GG L I Y + + HS
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQ---RVSFAKDIASGMAYLHS 126
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ ++HRDL N L + + + DFGL+
Sbjct: 127 MNIIHRDLNSHNCL-VRENKNV--VVADFGLA 155
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 7e-20
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
AF FD DG G I+ EL T + G +L+ II EVD+D G ID+ EF+ MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 8e-20
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SG
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 398 TMDYGEFIAAM 408
T+D+ EF+ M
Sbjct: 72 TIDFEEFLVMM 82
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 8e-20
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI 194
+LG+G +G + + A K I R ++ + + ++ I P +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 195 VGAYEDAVAVHVVMELCAGG--ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL---- 248
GA V + MEL + + ++I +G L +I V +V+A L
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI--LGKIAVSIVKALEHLHSKL 129
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+HRD+KP N L IN + K DFG+S
Sbjct: 130 SVIHRDVKPSNVL-INALGQV--KMCDFGIS 157
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-19
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
++G+G F T + ++ T E A + RKL T+ + + + E ++ L HPN+
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNI 87
Query: 192 IQIVGAYEDAV----AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
++ ++E V + +V EL G L + + + R I+ ++ H+
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 248 LG--VMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLK +N +FI +K D GL+
Sbjct: 148 RTPPIIHRDLKCDN-IFIT-GPTGSVKIGDLGLA 179
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 1e-19
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 13/263 (4%)
Query: 25 RTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNN 84
+ RP + P N S + +K + + T T I+ T
Sbjct: 39 KERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWT-TVIERTFHVETPEERE 97
Query: 85 RQPPA--PVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLG-----RKLG 137
A V ++Q+ + S + + K ++ + LG
Sbjct: 98 EWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLG 157
Query: 138 QGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGA 197
+G FG L EKAT + +A K + K + +++V E R++ + + HP + + +
Sbjct: 158 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYS 216
Query: 198 YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLK 256
++ + VME GGELF + + ++E +A IV ++ HS V++RDLK
Sbjct: 217 FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 276
Query: 257 PENFLFINQQEEAPLKTIDFGLS 279
EN + ++ +K DFGL
Sbjct: 277 LENLML---DKDGHIKITDFGLC 296
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 2e-19
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 23/162 (14%)
Query: 132 LGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGH 188
L +G G FG + +A E A K+ + +E+VR+E ++ L H
Sbjct: 11 LEEIIGIGGFGKVY----RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-H 65
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC--- 245
PN+I + G + +VME GG L + L V +
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYL 121
Query: 246 HSLG---VMHRDLKPENFLFINQQEEAP-----LKTIDFGLS 279
H ++HRDLK N L + + E LK DFGL+
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 3e-19
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 136 LGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195
+G+G FG L KA + +A K + K+ + +++ + + E ++ HP ++ +
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDL 255
+++ A ++ V++ GGELF + + + E +A I + HSL +++RDL
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 165
Query: 256 KPENFLFINQQEEAPLKTIDFGLS 279
KPEN L + + DFGL
Sbjct: 166 KPENILL---DSQGHIVLTDFGLC 186
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 1e-18
Identities = 27/161 (16%), Positives = 61/161 (37%), Gaps = 25/161 (15%)
Query: 340 LSEEEIAGLKEMFK--------MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG 391
L+++EI F +++ + E++ L + AN I +
Sbjct: 45 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERI---CRVF 100
Query: 392 DIDNS-GTMDYGEFIAAMLHLNKI-QREDHMYAAFSYFDKDGSGYITPDELQT------- 442
+ ++ + +F+ + + + + AF FD D G + ++L
Sbjct: 101 STSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG 160
Query: 443 ACQQFGLDDTQLEDI----IREVDQDNDGRIDYSEFVAMMQ 479
+ L ++++ + + E D D DG I+ SEF ++
Sbjct: 161 EGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 201
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 2e-18
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQK-EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
+G+++G G FGT + K + A K + T + ++ + E+ ++ H N
Sbjct: 28 VGQRIGSGSFGTVY----KGKWHGDVAVKML-NVTAPTPQQLQAFKNEVGVLRKTR-HVN 81
Query: 191 VIQIVGA-YEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACHSL 248
++ +G +A+ V + C G L+ + + +K D+ R ++ H+
Sbjct: 82 ILLFMGYSTAPQLAI--VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDLK N +F++ E+ +K DFGL+
Sbjct: 140 SIIHRDLKSNN-IFLH--EDNTVKIGDFGLA 167
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 2e-18
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 18/192 (9%)
Query: 90 PVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVE 149
P +A + G+ G Y L R +G+G G + +
Sbjct: 4 SHHHHHHSSGLVPRGSHMDGTAESREGTQFGP--------YRLRRLVGRGGMGDVYEAED 55
Query: 150 KATQKEFACKSIAKRKLTTEED-VEDVRREIRIMHHLAGHPNVIQI--VGAYEDAVAVHV 206
++ A K + L+++ ++RE R L P+V+ I G E ++V
Sbjct: 56 TVRERIVALK-LMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFG--EIDGQLYV 111
Query: 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ 266
M L G +L + ++G +A + R I ++A H+ G HRD+KPEN L ++
Sbjct: 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENIL-VSAD 170
Query: 267 EEAPLKTIDFGL 278
+ A +DFG+
Sbjct: 171 DFA--YLVDFGI 180
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 93 QQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRK-------------LGQG 139
+E+ S+ G G L L+ G LG G
Sbjct: 6 HHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTG 65
Query: 140 QFGTTFLC---VEKATQKEFACKSIAKRKLTTE-EDVEDVRREIRIMHHLAGHPNVIQIV 195
+G FL T K +A K + K + + + E R E +++ H+ P ++ +
Sbjct: 66 AYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH 125
Query: 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHSLGVM 251
A++ +H++++ GGELF + QR +TE + +I IV +E H LG++
Sbjct: 126 YAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV----QIYVGEIVLALEHLHKLGII 181
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLS 279
+RD+K EN L + DFGLS
Sbjct: 182 YRDIKLENILL---DSNGHVVLTDFGLS 206
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 2e-18
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
E Y K+G+G +G F C + T + A K + ++ V REIR++ L
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF---LESEDDPVIKKIALREIRMLKQL 59
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN++ ++ + +H+V E C DR + E +T + V
Sbjct: 60 K-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVN 116
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
CH +HRD+KPEN L I + +K DFG
Sbjct: 117 FCHKHNCIHRDVKPENIL-ITKHSV--IKLCDFGF 148
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 3e-18
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 86 QPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTF 145
Q P+ + + K + V + + Q + Y+ + +G G FG +
Sbjct: 18 QQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVY 71
Query: 146 LCVEKATQKEFACKSI---AKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI------VG 196
+ + A K + + K RE++IM L H N++++ G
Sbjct: 72 QAKLCDSGELVAIKKVLQDKRFKN----------RELQIMRKL-DHCNIVRLRYFFYSSG 120
Query: 197 AYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV--------VEACHSL 248
+D V +++V++ E R+ + HY+ K L I V + + HS
Sbjct: 121 EKKDEVYLNLVLDYV--PETVYRVAR--HYSRAKQ-TLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
G+ HRD+KP+N L ++ + A LK DFG + G
Sbjct: 176 GICHRDIKPQNLL-LD-PDTAVLKLCDFGSAKQLVRG 210
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 5e-18
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED----VRREIRIMHHL 185
Y LGRK+G G FG +L + A +E A K E V+ + E +I +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---------ECVKTKHPQLHIESKIYKMM 61
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFD-RIIQRGHYTERKAADLTRIIVGVVEA 244
G + I + +VMEL G L D ++ + L ++ +E
Sbjct: 62 QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
HS +HRD+KP+NFL ++ + IDFGL+ +R T
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 84.6 bits (209), Expect = 6e-18
Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 9/157 (5%)
Query: 127 KEMYSLGRKLGQGQ--FGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
Y L +G+G T L K T + + I + E V ++ E+ +
Sbjct: 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKL 82
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFD--RIIQRGHYTERKAADLTRIIVGVV 242
HPN++ + + VV A G D E A + + ++ +
Sbjct: 83 FN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ H +G +HR +K + L + + +
Sbjct: 142 DYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSN 175
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 1e-17
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 43/216 (19%)
Query: 87 PPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFL 146
AP+ + P V + V + G+ + Y+ + +G G FG F
Sbjct: 6 SNAPLNGVKLNPLDDPNKVIK-------VLASDGKTGEQREIAYTNCKVIGNGSFGVVFQ 58
Query: 147 CVEKATQKEFACKSI---AKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQI------VGA 197
+ E A K + + K RE++IM + HPNV+ + G
Sbjct: 59 AKLVESD-EVAIKKVLQDKRFKN----------RELQIMRIV-KHPNVVDLKAFFYSNGD 106
Query: 198 YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV--------VEACHSLG 249
+D V +++V+E E R + HY + K + +++ + + HS+G
Sbjct: 107 KKDEVFLNLVLEYV--PETVYRASR--HYAKLKQ-TMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ HRD+KP+N L ++ LK IDFG + G
Sbjct: 162 ICHRDIKPQNLL-LD-PPSGVLKLIDFGSAKILIAG 195
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 2e-17
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 417 EDHMYAAFSYFD-KDG-SGYITPDELQTACQQFGLDDT----QLEDIIREVDQDNDGRID 470
+ + AF F K+G I+ +EL+ Q G L+++I EVD++ DG +
Sbjct: 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63
Query: 471 YSEFVAMMQ 479
+ EF+ MM+
Sbjct: 64 FEEFLVMMK 72
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-13
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 341 SEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDS--EIDGLMQAGDIDNS 396
S EE +K F++ + I+ EELK +Q +G +L+ +D +++ D +
Sbjct: 3 SPEE---IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGD 59
Query: 397 GTMDYGEFIAAMLHLNK 413
G + + EF+ M +++
Sbjct: 60 GEVSFEEFLVMMKKISQ 76
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 77.7 bits (191), Expect = 2e-17
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 23/116 (19%)
Query: 365 LEELKKGLQRVGANLMDSEIDG-LMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAA 423
+E L+ + + A + E+ + D D + +D E A+ H++K + +
Sbjct: 50 MEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQ---- 105
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ ++ DEL ++ ++R+ D++NDG IDY+EF +Q
Sbjct: 106 --------APLMSEDELIN----------IIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 3e-17
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
Y +GR++G+G FG F ++ A K D +R E R LAG
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-----FEPRRSDAPQLRDEYRTYKLLAG 64
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFD-RIIQRGHYTERKAADLTRIIVGVVEACH 246
+ + ++ + +V++L G L D + ++ + A + ++ V++ H
Sbjct: 65 CTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 123
Query: 247 SLGVMHRDLKPENFLF--INQQEEAPLKTIDFGLSMFFRPGLTFR 289
+++RD+KP+NFL N + + +DFG+ F+R +T +
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 168
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 3e-17
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ LGRK+G G FG +L T +E A K + + E +I L G
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLLYESKIYRILQGGT 63
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFD-RIIQRGHYTERKAADLTRIIVGVVEACHSL 248
+ + + +VM+L G L D + + L ++ VE HS
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
+HRD+KP+NFL + + IDFGL+ +R
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 9/157 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ +G+K+G G FG L T + A K + K + E R L
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMK----SRAPQLHLEYRFYKQLGSGD 65
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFD-RIIQRGHYTERKAADLTRIIVGVVEACHSL 248
+ Q+ +V+EL G L D + ++ + + ++ +E HS
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 249 GVMHRDLKPENFLF--INQQEEAPLKTIDFGLSMFFR 283
+++RD+KPENFL + + + IDF L+ +
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 4e-17
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 136 LGQGQFGTTFLC---VEKATQKEFACKSIAKRKLTT-EEDVEDVRREIRIMHHLAGHPNV 191
LG+G +G F T K FA K + K + +D + E I+ HP +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-VKHPFI 83
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHS 247
+ ++ A++ +++++E +GGELF ++ + G + E A I + H
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA----CFYLAEISMALGHLHQ 139
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+++RDLKPEN + + +K DFGL
Sbjct: 140 KGIIYRDLKPENIML---NHQGHVKLTDFGLC 168
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 6e-17
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
LG ++G+G FG F +A A KS R+ + +E RI+ HPN
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQY-SHPN 173
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC---HS 247
+++++G +++VMEL GG+ + R + L +++ S
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E+ LK DFG+S
Sbjct: 232 KCCIHRDLAARNCLV---TEKNVLKISDFGMS 260
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 1e-16
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 136 LGQGQFGTTFLC---VEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVI 192
LGQG FG FL ++ +A K + K L + V + E I+ HP ++
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKMERDILVE-VNHPFIV 89
Query: 193 QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRI----IVGVVEACHSL 248
++ A++ ++++++ GG+LF R+ + +TE + + ++ HSL
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV----KFYLAELALALDHLHSL 145
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G+++RDLKPEN L EE +K DFGLS
Sbjct: 146 GIIYRDLKPENILL---DEEGHIKLTDFGLS 173
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 2e-16
Identities = 41/225 (18%), Positives = 80/225 (35%), Gaps = 35/225 (15%)
Query: 81 INNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQ 140
++++ + V + + G VL GN + LG+K+G G
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMP--------FPEGKVLDDMEGN---QWVLGKKIGSGG 49
Query: 141 FGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV----- 195
FG +L ++ A + K + ++ + E++ +A + + +
Sbjct: 50 FGLIYLAFPTNKPEKDARHVV-KVE---YQENGPLFSELKFYQRVAKKDCIKKWIERKQL 105
Query: 196 -----------GAYEDAVAVH--VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
G E + +VME G +L Q G + + L ++ V+
Sbjct: 106 DYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVL 164
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
E H +H D+K N L + + + D+GLS + P
Sbjct: 165 EYIHENEYVHGDIKAANLL-LGYKNPDQVYLADYGLSYRYCPNGN 208
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 78.8 bits (194), Expect = 3e-16
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 147 CVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206
++ + + L++ ++ +IR M + N + + V +++
Sbjct: 80 KWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKNTVGQLQPSSPKVYLYI 138
Query: 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA---CHSLGVMHRDLKPENFLFI 263
M+LC L D + +R +R+ I + + EA HS G+MHRDLKP N +F
Sbjct: 139 QMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN-IFF 197
Query: 264 NQQEEAPLKTIDFGLS 279
+ +K DFGL
Sbjct: 198 TMDDV--VKVGDFGLV 211
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 7e-07
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + +G+G FG F K +A K I E V RE++ + L HP
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKL-EHP 64
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+++ A+ + E+ + A +I + +
Sbjct: 65 GIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV 124
Query: 250 VMHRDLKPENFLFINQQE 267
+ P+ +L+I Q +
Sbjct: 125 GQLQPSSPKVYLYI-QMQ 141
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 3e-16
Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 13/160 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
E Y +G+G +G C K T + A K + ++ + REI+++ L
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF---LESDDDKMVKKIAMREIKLLKQL 81
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H N++ ++ + ++V E + + + I+ +
Sbjct: 82 R-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIG 138
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283
CHS ++HRD+KPEN + ++Q +K DFG +
Sbjct: 139 FCHSHNIIHRDIKPEN-ILVSQSGV--VKLCDFGFARTLA 175
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 6e-16
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED-VEDVRREIRIMHHLAGH 188
Y + KLG G T +L + + A K +E+ ++ RE+ L+ H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIK-AIFIPPREKEETLKRFEREVHNSSQLS-H 70
Query: 189 PNVIQI--VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
N++ + V E+ ++VME G L + I G + A + T I+ ++ H
Sbjct: 71 QNIVSMIDVD--EEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+ ++HRD+KP+N L LK DFG+
Sbjct: 129 DMRIVHRDIKPQNILI---DSNKTLKIFDFGI 157
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 33/216 (15%), Positives = 81/216 (37%), Gaps = 32/216 (14%)
Query: 94 QQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQ 153
+ Q+ + + KR + VG ++ + +G +GQG FG +L + +
Sbjct: 4 VKAAQAGRQSSAKRHLAEQFAVGEIITDMAAA---AWKVGLPIGQGGFGCIYL-ADMNSS 59
Query: 154 KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV----------------GA 197
+ + K+ D + E++ A + + + G
Sbjct: 60 ESVGSDAPCVVKVE-PSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118
Query: 198 YEDAVAVH--VVMELCAGG----ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
++ + ++M+ G ++++ ++ + L+ I+ ++E H +
Sbjct: 119 HDKNGKSYRFMIMDRF--GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHEHEYV 174
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
H D+K N L +N + + +D+GL+ + P
Sbjct: 175 HGDIKASNLL-LNYKNPDQVYLVDYGLAYRYCPEGV 209
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 6e-15
Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 24/181 (13%)
Query: 82 NNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVL-GRKTGNLKEMYSLGRKLGQGQ 140
+ R+P + P + GR Y L G
Sbjct: 4 DALREPDRESSAPPDDVQLVPG------------ARIANGR--------YRLLIFHGGVP 43
Query: 141 FGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200
+ ++ A ++ A + + + ++ +++ + + P V +++
Sbjct: 44 PLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHT 102
Query: 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENF 260
VV E GG L + + A + + +A H GV P
Sbjct: 103 RAGGLVVAEWIRGGSLQEVA--DTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRV 160
Query: 261 L 261
Sbjct: 161 R 161
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 7e-15
Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 20/166 (12%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
G+ LG G FG KE A +A K + ++ E + E++IM HL
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFD------RIIQRGHYTERKAA-----DLTR 236
H N++ ++GA V V+ E C G+L + R+++ + DL
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 237 IIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V + S +HRD+ N L K DFGL+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLL---TNGHVAKIGDFGLA 211
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 7e-15
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED-----VRREIRIM 182
+ Y LG+GQF T + +K T + A K I KL + +D REI+++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLL 66
Query: 183 HHLAGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVG 240
L+ HPN+I ++ A+ + +V + + T + +
Sbjct: 67 QELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQ 123
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+E H ++HRDLKP N L +++ LK DFGL+ F
Sbjct: 124 GLEYLHQHWILHRDLKPNNLL-LDENGV--LKLADFGLAKSF 162
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 7e-15
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 21/175 (12%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR-----REIRIM 182
Y ++G G +GT + + + A KS+ ++ RE+ ++
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGGGGGGGLPISTVREVALL 65
Query: 183 HHL--AGHPNVIQ----IVGAYEDAVA-VHVVMELCAG--GELFDRIIQRGHYTERKAAD 233
L HPNV++ + D V +V E D+ G D
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKD 124
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
L R + ++ H+ ++HRDLKPEN L + +K DFGL+ + +
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENIL-VTSGGT--VKLADFGLARIYSYQMAL 176
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 8e-15
Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 54/220 (24%)
Query: 83 NNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFG 142
+ + Q+ Q++ + + S + + Y + +G G +G
Sbjct: 15 GTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDR-------YEIRHLIGTGSYG 67
Query: 143 TTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ 193
+K ++ A K I KR L REI I++ L H +V++
Sbjct: 68 HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRIL----------REIAILNRL-NHDHVVK 116
Query: 194 IV-----GAYEDAVAVHVVMELC---------AGGELFDRIIQRGHYTERKAADLTRIIV 239
++ E ++VV+E+ L + I+ Y ++V
Sbjct: 117 VLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLY---------NLLV 167
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
GV + HS G++HRDLKP N L +N ++ +K DFGL+
Sbjct: 168 GV-KYVHSAGILHRDLKPANCL-VN--QDCSVKVCDFGLA 203
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
R LG+G FG LC A KS+ + + + D+++EI I+ +L
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEILRNLY- 81
Query: 188 HPNVIQIVGA--YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H N+++ G + + ++ME G L + + + + + V + +
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGM 139
Query: 246 HSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
LG HRDL N L + E +K DFGL+
Sbjct: 140 DYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLT 173
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-14
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
++LG+G FG+ +C Q A K + + +TEE + D REI I+ L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQ- 69
Query: 188 HPNVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H N+++ G A + ++ME G L D + + H L + + +
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127
Query: 246 ---HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +HRDL N L + E +K DFGL+
Sbjct: 128 EYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 161
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 1e-14
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
++LG+G FG+ +C Q A K + + +TEE + D REI I+ L
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQ- 100
Query: 188 HPNVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H N+++ G A + ++ME G L D + + H L + + +
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 158
Query: 246 ---HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ +HRDL N L + E +K DFGL+
Sbjct: 159 EYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 192
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 2e-14
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 60/188 (31%)
Query: 120 GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEE 170
GR ++ Y L +KLG+G +G + +++ T + A K I A+R
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF---- 56
Query: 171 DVEDVRREIRIMHHLAGHPNVIQI--VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTE 228
REI I+ L+GH N++ + V ++ V++V +
Sbjct: 57 ------REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM----------------- 93
Query: 229 RKAADLTRIIVG-----------------VVEACHSLGVMHRDLKPENFLFINQQEEAPL 271
DL +I V++ HS G++HRD+KP N + +N E +
Sbjct: 94 --ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSN-ILLN--AECHV 148
Query: 272 KTIDFGLS 279
K DFGLS
Sbjct: 149 KVADFGLS 156
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 2e-14
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
E + K+G+G +G + K T + A K I +L TE + REI ++ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL 59
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN+++++ +++V E + D ++ +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLA 117
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CHS V+HRDLKP+N L IN + +K DFGL+ F
Sbjct: 118 FCHSHRVLHRDLKPQNLL-INTEGA--IKLADFGLARAF 153
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 19/174 (10%)
Query: 111 AGLQVGSVL-GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE 169
+ + S L R Y LG LG G L + ++ A K + + L +
Sbjct: 2 SHMTTPSHLSDR--------YELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARD 52
Query: 170 ED-VEDVRREIRIMHHLAGHPNVIQI--VGAYEDAVAVHV--VMELCAGGELFDRIIQRG 224
RRE + L HP ++ + G E VME G L D + G
Sbjct: 53 PSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG 111
Query: 225 HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
T ++A ++ + H G++HRD+KP N + +K +DFG+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGI 162
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-14
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 35/182 (19%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIR 180
Y +G G +G+ ++K + ++ A K + AKR RE+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY----------RELL 75
Query: 181 IMHHLAGHPNVIQIV------GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
++ H+ H NVI ++ + + ++VM +L +I+ E+ +
Sbjct: 76 LLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPF-MQTDL-QKIMGLKFSEEKIQYLV 132
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV---W 291
+++ G+ + HS GV+HRDLKP N L +N E+ LK +DFGL+ +T V W
Sbjct: 133 YQMLKGL-KYIHSAGVVHRDLKPGN-LAVN--EDCELKILDFGLARHADAEMTGYVVTRW 188
Query: 292 LR 293
R
Sbjct: 189 YR 190
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-14
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+S E A E+F D D G+++ E+++ + L + + + D + G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGKL 61
Query: 400 DYGEFIAAMLHL 411
+F A HL
Sbjct: 62 SKDQFALAF-HL 72
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-12
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F DKD G+++ E++ + GL T L I D + G++ +F
Sbjct: 16 FLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 2e-14
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 32/165 (19%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIR 180
Y + +G G G + + A K + AKR RE+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY----------RELV 113
Query: 181 IMHHLAGHPNVIQIV------GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
+M + H N+I ++ E+ V++VMEL L ++IQ ER + L
Sbjct: 114 LMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANL-CQVIQMELDHERMSYLL 170
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+++ G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 171 YQMLCGI-KHLHSAGIIHRDLKPSN-IVVK--SDCTLKILDFGLA 211
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 3e-14
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
+ Y KLG+G +G + ++ T + A K I +L EE+ RE+ ++ L
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKEL 90
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H N+I++ +H++ E +L + + + R ++ V C
Sbjct: 91 Q-HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 246 HSLGVMHRDLKPENFLFINQQEEAP---LKTIDFGLSMFF 282
HS +HRDLKP+N L ++ + + LK DFGL+ F
Sbjct: 149 HSRRCLHRDLKPQNLL-LSVSDASETPVLKIGDFGLARAF 187
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 4e-14
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
+ Y K+G+G +GT F + T + A K + +L +++ REI ++ L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV---RLDDDDEGVPSSALREICLLKEL 58
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H N++++ + +V E C + FD G ++ +
Sbjct: 59 K-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLG 115
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CHS V+HRDLKP+N L IN+ E LK +FGL+ F
Sbjct: 116 FCHSRNVLHRDLKPQN-LLINRNGE--LKLANFGLARAF 151
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 4e-14
Identities = 43/157 (27%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
R LG+G FG L T A K++ + + ++EI I+ L
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDILRTLY- 91
Query: 188 HPNVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H ++I+ G EDA A + +VME G L D + H A L + E
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRH--SIGLAQLLLFAQQICEGM 147
Query: 246 HSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L HRDL N L + +K DFGL+
Sbjct: 148 AYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLA 181
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 4e-14
Identities = 20/146 (13%), Positives = 40/146 (27%), Gaps = 21/146 (14%)
Query: 347 GLKEMFKMIDT---DNSGYITLEELKKGLQRVGANLMDSE------IDGLMQAGDIDNSG 397
G + I +L+ L + + L+ ++ +G
Sbjct: 2 GSSHHHHHHSSGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNG 61
Query: 398 TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD-----DT 452
+D EF L Q F G + +L A +
Sbjct: 62 RLDQEEFARLWKRLVHYQ------HVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR 114
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMM 478
+L ++ D+ GR+ + V +
Sbjct: 115 ELLHLVTLRYSDSVGRVSFPSLVCFL 140
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 3e-10
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 11/96 (11%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANL---MDSEIDGLMQAGDIDNSGTMDYGEF 404
+ +F+ + + G + +L K ++ + E+ L+ D+ G + +
Sbjct: 78 YQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSVGRVSFPSL 136
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSG-YITPDE 439
+ ++ L + M F KDG G Y+T E
Sbjct: 137 VCFLMRL------EAMAKTFRNLSKDGKGLYLTEME 166
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 3e-04
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 15/84 (17%)
Query: 417 EDHMYAAF-SYFDKDGSGYITPDELQTA----------CQQFGLDDTQLEDIIREVDQDN 465
H + + I +LQ F LD+ + ++ ++
Sbjct: 4 SHHHHHHSSGLVPRGSD--IDATQLQGLLNQELLTGPPGDMFSLDECRS--LVALMELKV 59
Query: 466 DGRIDYSEFVAMMQDSGLGKKVFK 489
+GR+D EF + + + VF+
Sbjct: 60 NGRLDQEEFARLWKRLVHYQHVFQ 83
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 4e-14
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 20/164 (12%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEF---ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+LGR LG+G+FG+ K F A K + K + D+E+ RE M
Sbjct: 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEF-D 83
Query: 188 HPNVIQIVGA------YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA---ADLTRII 238
HP+V ++VG V++ G+L ++ L R +
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 239 VGVVEACHSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
V + L HRDL N + E+ + DFGLS
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCML---AEDMTVCVADFGLS 184
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 4e-14
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
+++E+ FK I D +G+I K+ + + L E+ + + D D G
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGA 59
Query: 399 MDYGEFIAAMLHLNKIQREDH 419
+ EF AA HL ++ +
Sbjct: 60 LTLDEFCAAF-HLVVARKNGY 79
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-13
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
F D +G+I + + L +L I D D DG + EF A
Sbjct: 13 NQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH 70
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 5e-14
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 34/182 (18%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIR 180
Y +G G +G+ + T A K + AKR RE+R
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----------RELR 80
Query: 181 IMHHLAGHPNVIQIV------GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
++ H+ H NVI ++ + E+ V++V L G +L + I++ T+ L
Sbjct: 81 LLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFL 137
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV---W 291
I+ ++ HS ++HRDLKP N L +N E+ LK +DFGL+ +T V W
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSN-LAVN--EDCELKILDFGLARHTADEMTGYVATRW 194
Query: 292 LR 293
R
Sbjct: 195 YR 196
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
+L R LG G FG + + + +A K ++ +E+D D E I+
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN- 91
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA----DLTRIIVGVVE 243
H N+++ +G ++ ++MEL AGG+L + + + ++ DL + +
Sbjct: 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 244 ACHSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
C L HRD+ N L K DFG++
Sbjct: 152 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 5e-14
Identities = 50/232 (21%), Positives = 79/232 (34%), Gaps = 35/232 (15%)
Query: 64 PAPTPTPIQSTPPPPVKINNNRQPP---APVPQQQQEQSKKPAHV-----KRISSA-GLQ 114
AP P+++ PV + R PV + E S L
Sbjct: 14 RAPDIDPLEALMTNPVVPESKRFCWNCGRPVGRSDSETKGASEGWCPYCGSPYSFLPQLN 73
Query: 115 VGSVL-GRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVE 173
G ++ G+ Y + + G G + A + + + + L D E
Sbjct: 74 PGDIVAGQ--------YEVKGCIAHGGLGW----IYLALDRNVNGRPVVLKGLVHSGDAE 121
Query: 174 DVRREIRIMHHLAG--HPNVIQI--VGAYEDAVAVHV---VMELCAGGELFDRIIQRGHY 226
+ LA HP+++QI + D V VME G L
Sbjct: 122 AQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKL 179
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+A I+ + HS+G+++ DLKPEN + +Q LK ID G
Sbjct: 180 PVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ----LKLIDLGA 227
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 6e-14
Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
S G+ LG G FG K A ++A K + + E + E++++ +L
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFD---------------RIIQRGHYTERKAA 232
H N++ ++GA V+ E C G+L + I
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 233 DLTRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
DL V + S +HRDL N L K DFGL+
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLA 192
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 6e-14
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
++EE+ F+ + D S +I+ K + + L E+ + + D D G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73
Query: 400 DYGEFIAAMLHL 411
EF AA HL
Sbjct: 74 TLPEFCAAF-HL 84
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-11
Identities = 14/57 (24%), Positives = 20/57 (35%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F D S +I+ + + L +L I D D DG + EF A
Sbjct: 26 NQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAF 82
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 18/157 (11%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+LG+G FG+ LC A K + + + + D +REI+I+ L
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQILKAL-H 82
Query: 188 HPNVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
+++ G + +VME G L D + + H A+ L + +
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGM 140
Query: 246 HSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
LG HRDL N L + EA +K DFGL+
Sbjct: 141 EYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLA 174
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 7e-14
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
+L R LG G FG + + + +A K ++ +E+D D E I+
Sbjct: 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN- 132
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA----DLTRIIVGVVE 243
H N+++ +G ++ +++EL AGG+L + + + ++ DL + +
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 244 ACHSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
C L HRD+ N L K DFG++
Sbjct: 193 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 9e-14
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 36/171 (21%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-------AKRKLTTEEDVEDVRREIRIM 182
Y + LG G G F V+ K A K I K L REI+I+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL----------REIKII 62
Query: 183 HHLAGHPNVIQI--------------VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTE 228
L H N++++ VG+ + +V++V E +L ++++G E
Sbjct: 63 RRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-METDL-ANVLEQGPLLE 119
Query: 229 RKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
A ++ ++ HS V+HRDLKP N LFIN E+ LK DFGL+
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPAN-LFIN-TEDLVLKIGDFGLA 168
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 15/156 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEF---ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+G+G FG + + A KS+ ++T +V E IM
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDF-S 84
Query: 188 HPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HPNV+ ++G + VV+ G+L + I R DL + V +
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 142
Query: 247 SLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L HRDL N + ++ E+ +K DFGL+
Sbjct: 143 YLASKKFVHRDLAARNCM-LD--EKFTVKVADFGLA 175
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 109 SSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT 168
S L + ++ + + + R GQG FGT L EK+T A K +
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV------- 56
Query: 169 EEDVEDVRREIRIMHHLA--GHPNVIQIVGAY-------EDAVAVHVVMELCAGGELFDR 219
+D RE++IM LA HPN++Q+ + + ++VVME + R
Sbjct: 57 IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV--PDTLHR 114
Query: 220 IIQRGHYTERKAADLTRIIVGV--------VEACH--SLGVMHRDLKPENFLFINQQEEA 269
+ +Y R+ I++ V + H S+ V HRD+KP N L +N + +
Sbjct: 115 CCR--NYYRRQ-VAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL-VN-EADG 169
Query: 270 PLKTIDFGLSMFFRPG 285
LK DFG + P
Sbjct: 170 TLKLCDFGSAKKLSPS 185
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 1e-13
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIR 180
Y + +G G G + ++ A K + AKR RE+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY----------RELV 76
Query: 181 IMHHLAGHPNVIQIV------GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
+M + H N+I ++ + E+ V++VMEL L ++IQ ER + L
Sbjct: 77 LMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANL-CQVIQMELDHERMSYLL 133
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+++ G+ + HS G++HRDLKP N + + + LK +DFGL+
Sbjct: 134 YQMLCGI-KHLHSAGIIHRDLKPSN-IVVK--SDCTLKILDFGLA 174
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 34/182 (18%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIR 180
Y + +G G +G V+ T + A K + AKR RE+R
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY----------RELR 76
Query: 181 IMHHLAGHPNVIQIV------GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
++ H+ H NVI ++ +D ++VM G +L ++++ E + L
Sbjct: 77 LLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPF-MGTDL-GKLMKHEKLGEDRIQFL 133
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV---W 291
++ + H+ G++HRDLKP N L +N E+ LK +DFGL+ +T V W
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGN-LAVN--EDCELKILDFGLARQADSEMTGYVVTRW 190
Query: 292 LR 293
R
Sbjct: 191 YR 192
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 2e-13
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 13/161 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV-EDVRREIRIMHHLA 186
+ KLG G + T + + K T A K + KL +EE REI +M L
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKELK 61
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGG-----ELFDRIIQRGHYTERKAADLTRIIVGV 241
H N++++ + +V E + ++
Sbjct: 62 -HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+ CH ++HRDLKP+N L IN++ + LK DFGL+ F
Sbjct: 121 LAFCHENKILHRDLKPQNLL-INKRGQ--LKLGDFGLARAF 158
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 131 SLGRKLGQGQFGT----TFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+ LG G FGT ++ + + A K + R+ T+ + +++ E +M +
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASVD 75
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
+P+V +++G + V ++ +L G L D + R H + L V + + +
Sbjct: 76 -NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMN 131
Query: 247 ---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDL N L + +K DFGL+
Sbjct: 132 YLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLA 164
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
E Y KLG+G + T + K T A K I +L EE RE+ ++ L
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGA-PCTAIREVSLLKDL 57
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H N++ + ++ +V E + D ++ +
Sbjct: 58 K-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD--CGNIINMHNVKLFLFQLLRGLA 114
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CH V+HRDLKP+N L IN++ E LK DFGL+
Sbjct: 115 YCHRQKVLHRDLKPQNLL-INERGE--LKLADFGLARAK 150
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-13
Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 17/161 (10%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAGH 188
+ R+LGQG FG + V K K+ +A K + + + + E +M
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NC 87
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-------DLTRIIVGV 241
+V++++G V+MEL G+L + + ++ +
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 242 VEACHSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ L HRDL N + + E+ +K DFG++
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCM-VA--EDFTVKIGDFGMT 185
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 3e-13
Identities = 45/201 (22%), Positives = 73/201 (36%), Gaps = 40/201 (19%)
Query: 92 PQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKA 151
+ A + + VG Y+ +G+G +G +
Sbjct: 2 HHHHHMAAAAAAGPEMVRGQVFDVG-----------PRYTNLSYIGEGAYGMVCSAYDNL 50
Query: 152 TQKEFACKSI--------AKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV-----GAY 198
+ A K I +R L REI+I+ H N+I I
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTL----------REIKILLRFR-HENIIGINDIIRAPTI 99
Query: 199 EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPE 258
E V++V +L +L ++++ H + I+ ++ HS V+HRDLKP
Sbjct: 100 EQMKDVYIVQDL-METDL-YKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 157
Query: 259 NFLFINQQEEAPLKTIDFGLS 279
N L +N LK DFGL+
Sbjct: 158 N-LLLN--TTCDLKICDFGLA 175
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 71.0 bits (173), Expect = 4e-13
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 19/182 (10%)
Query: 307 LQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLE 366
L + L ++ + + + I + SEEE +++F + + ++
Sbjct: 693 LISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEE-RQFRKLFVQLA-GDDMEVSAT 750
Query: 367 ELKKGLQRVGANLMDSEIDG--------LMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED 418
EL L +V D + DG ++ D D +G + + EF ++ K Q
Sbjct: 751 ELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQG-- 808
Query: 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVA 476
+ F+ D SG I +EL A + G L+ IIR D G +D+ F++
Sbjct: 809 ----IYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNFIS 863
Query: 477 MM 478
+
Sbjct: 864 CL 865
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 2e-09
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I + ++K +TD SG I EL + G +L +++ D +G MD+ F
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNF 861
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
I+ ++ L+ M+ AF DK+G+G I
Sbjct: 862 ISCLVRLDA------MFRAFRSLDKNGTGQIQ 887
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 58.6 bits (141), Expect = 3e-09
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 18/178 (10%)
Query: 311 LVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370
L+R +E + + EE K +F + + I+++EL+
Sbjct: 499 LLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLA-GDDMEISVKELQT 557
Query: 371 GLQRVGANLMDSEID--------GLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYA 422
L R+ + D + ++ D D +G + EF +
Sbjct: 558 ILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRN------YLT 611
Query: 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F FD D SG ++ E++ A + G L + I+ D++ ID+ FV +
Sbjct: 612 IFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCL 668
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 57.5 bits (138), Expect = 7e-09
Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I +F+ D D SG ++ E++ ++ G L ++ ++ A D+ +D+ F
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKL-PCQLHQVIVARFADDELIIDFDNF 664
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
+ ++ L + ++ F D + +G I
Sbjct: 665 VRCLVRL------EILFKIFKQLDPENTGTIQ 690
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 4e-13
Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 28/221 (12%)
Query: 85 RQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTT 144
S L G+VL K+G + L + G
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMTTSLEALPTGTVLTDKSGR---QWKLKSFQTRDNQGIL 58
Query: 145 FL--------CVEKATQKEFACKSIAKR-KLTTEEDV-------EDVRREIRIMHHLAGH 188
+ C +++F+ K AK +L E++ V + ++ +
Sbjct: 59 YEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKL--YSTPL 116
Query: 189 PNVIQIV--GAYEDAVAVHVVMELCAGGELFD--RIIQRGHYTERKAADLTRIIVGVVEA 244
+ + G ++D +V+ G L + + +ER + ++ +E
Sbjct: 117 LAIPTCMGFGVHQDKYRF-LVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEF 174
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
H +H ++ EN ++ ++++ + +G + + P
Sbjct: 175 LHENEYVHGNVTAENIF-VDPEDQSQVTLAGYGFAFRYCPS 214
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 4e-13
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEF---ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
LG+ LG+G+FG+ K A K++ K +++ ++E+ E M
Sbjct: 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKDF-S 94
Query: 188 HPNVIQIVGA-----YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKA---ADLTRIIV 239
HPNVI+++G + V++ G+L ++ T K L + +V
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 240 GVVEACHSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ L HRDL N + +++ + DFGLS
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCVADFGLS 194
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 5e-13
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 15/156 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEF---ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+G+G FG + + A KS+ ++T +V E IM +
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFS- 148
Query: 188 HPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HPNV+ ++G + VV+ G+L + I R DL + V +
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 206
Query: 247 SLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L HRDL N + E+ +K DFGL+
Sbjct: 207 FLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 239
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 5e-13
Identities = 44/200 (22%), Positives = 67/200 (33%), Gaps = 57/200 (28%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---AKRKLTTEEDVEDVRREIRIMHHLA 186
YSLG+ LG G FG + + K FA K + + K RE+ IM L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----------RELDIMKVLD 58
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA-------------- 232
H N+I++V + G K+
Sbjct: 59 -HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117
Query: 233 -----DLTRIIVGVVEA----------------------CHSLGVMHRDLKPENFLFINQ 265
L +++ + + HSLG+ HRD+KP+N L +N
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL-VN- 175
Query: 266 QEEAPLKTIDFGLSMFFRPG 285
++ LK DFG + P
Sbjct: 176 SKDNTLKLCDFGSAKKLIPS 195
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 5e-13
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
+ +++G GQFG L K A K+I R+ E ED E +M L+ HP
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTI--REGAMSE--EDFIEEAEVMMKLS-HPK 64
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH---S 247
++Q+ G + + +V E G L D + R A L + + V E
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V+HRDL N L + + + K DFG++
Sbjct: 123 ACVIHRDLAARNCL-VGENQVI--KVSDFGMT 151
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 6e-13
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
E Y K+G+G +G + + FA K I +L E++ REI I+ L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKI---RLEKEDEGIPSTTIREISILKEL 57
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVE 243
H N++++ + +V E +L D G A ++ +
Sbjct: 58 K-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIA 114
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CH V+HRDLKP+N L IN++ E LK DFGL+ F
Sbjct: 115 YCHDRRVLHRDLKPQNLL-INREGE--LKIADFGLARAF 150
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 6e-13
Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 23/166 (13%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF--ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+G+G FG K A K + ++ +++D D E+ ++ L HP
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFD-----RIIQRGHYTERKAA--------DLTR 236
N+I ++GA E +++ +E G L D R+++ + L
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 237 IIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
V +HRDL N L + E K DFGLS
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNIL-VG--ENYVAKIADFGLS 189
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 7e-13
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 53/176 (30%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI---------AKRKLTTEEDVEDVRREIR 180
Y + +G+G +G +L +K T+K A K + KR L REI
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL----------REIT 77
Query: 181 IMHHLAGHPNVIQIV--------GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
I++ L +I++ +++ +++V+E+ A +L ++ +
Sbjct: 78 ILNRL-KSDYIIRLYDLIIPDDLLKFDE---LYIVLEI-ADSDL-KKLF-------KTPI 124
Query: 233 DLTR---------IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
LT +++G H G++HRDLKP N L +N ++ +K DFGL+
Sbjct: 125 FLTEEHIKTILYNLLLG-ENFIHESGIIHRDLKPANCL-LN--QDCSVKVCDFGLA 176
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 8e-13
Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 15/161 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA---KR-KLTTEEDVEDVRREIRIMHHLA 186
LGQG F F V + K E +M L+
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
H +++ G +V E G L + + + + + A H
Sbjct: 71 -HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMH 127
Query: 247 ---SLGVMHRDLKPENFLFINQQEEAPL-----KTIDFGLS 279
++H ++ +N L I +++ K D G+S
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 9e-13
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLM 388
PP+ + + + +++F D SG++T + + L + ++L +++ +
Sbjct: 1 PPVAEWAV----PQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIW 54
Query: 389 QAGDIDNSGTMDYGEFIAAMLHL 411
DID G + EFI AM HL
Sbjct: 55 NLSDIDQDGKLTAEEFILAM-HL 76
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 9e-13
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 424 FSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F+ DK SG++T + +T Q L QL I D D DG++ EF+ M
Sbjct: 20 FNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 9e-13
Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI--------AKRKLTTEEDVEDVRREIRI 181
+ L LG+G +G K T + A K I A R L REI+I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----------REIKI 62
Query: 182 MHHLAGHPNVIQIV-----GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
+ H H N+I I ++E+ V+++ EL +L R+I ++
Sbjct: 63 LKHFK-HENIITIFNIQRPDSFENFNEVYIIQEL-MQTDL-HRVISTQMLSDDHIQYFIY 119
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ V+ H V+HRDLKP N L IN LK DFGL+
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSN-LLIN--SNCDLKVCDFGLA 159
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 9e-13
Identities = 39/154 (25%), Positives = 58/154 (37%), Gaps = 14/154 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF---ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
+ + +G G G + + A K++ + TE D E IM H
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMGQFD-H 109
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH-- 246
PN+I++ G +V E G L + R H + L ++ GV
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 247 -SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
LG +HRDL N L ++ K DFGLS
Sbjct: 168 SDLGYVHRDLAARNVL-VDSNLVC--KVSDFGLS 198
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 1e-12
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
+ ++LG GQFG + A K I ++ + E ++ E ++M +L+ H
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMI--KEGSMSE--DEFIEEAKVMMNLS-HEK 80
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH---S 247
++Q+ G + ++ E A G L + + R + L + V EA S
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L +N Q K DFGLS
Sbjct: 139 KQFLHRDLAARNCL-VNDQGVV--KVSDFGLS 167
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 1e-12
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 39/185 (21%)
Query: 135 KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR----REIRIMHHLAGHPN 190
K+GQG FG F + T ++ A K K+ E + E REI+I+ L H N
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQLLK-HEN 77
Query: 191 VIQIVG--------AYEDAVAVHVVMELC----AGGELFDRIIQRGHYTERKAADLTRII 238
V+ ++ ++++V + C AG L +T + + +++
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSN--VLVKFTLSEIKRVMQML 133
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF-------RPGLTFRV- 290
+ + H ++HRD+K N L LK DFGL+ F T RV
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYTNRVV 190
Query: 291 --WLR 293
W R
Sbjct: 191 TLWYR 195
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
++ KLG GQ+G + V K A K++ ++ T E E+ +E +M + HPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEV--EEFLKEAAVMKEIK-HPN 70
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFD--RIIQRGHYTERKAADLTRIIVGVVEACH-- 246
++Q++G +++ E G L D R R + A L + + A
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS---AVVLLYMATQISSAMEYL 127
Query: 247 -SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L + E +K DFGLS
Sbjct: 128 EKKNFIHRDLAARNCL-VG--ENHLVKVADFGLS 158
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 23/169 (13%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
LG+ LG+G FG K C+++A K ++ T + + E++I+ H+
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 188 HPNVIQIVGA-YEDAVAVHVVMELCAGGEL-------------FDRIIQRGHYTERKAAD 233
H NV+ ++GA + + V++E C G L + + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 234 LTRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
L V + S +HRDL N L ++ E+ +K DFGL+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNIL-LS--EKNVVKICDFGLA 195
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 47/155 (30%), Positives = 62/155 (40%), Gaps = 13/155 (8%)
Query: 131 SLGRKLGQGQFGTTF---LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
L KLG G FG A K + L+ E ++D RE+ MH L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 79
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H N+I++ G + +V EL G L DR+ R H L+R V V E
Sbjct: 80 HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 248 LGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L HRDL N L + ++ K DFGL
Sbjct: 137 LESKRFIHRDLAARNLL-LATRDLV--KIGDFGLM 168
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 14/155 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEF---ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
S+ + +G G+FG K K+ A K++ + TE+ D E IM
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFD- 104
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH- 246
HPN+I++ G + V +V E G L + R H + L ++ G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 247 --SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+G +HRDL N L IN K DFGL
Sbjct: 163 LSDMGYVHRDLAARNIL-INSNLVC--KVSDFGLG 194
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 2e-12
Identities = 36/174 (20%), Positives = 56/174 (32%), Gaps = 35/174 (20%)
Query: 132 LGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVR-REIRIMHHLAGH 188
L +G+G+FG + + +E A K ++ E+ R EI L H
Sbjct: 46 LQESIGKGRFGEVW----RGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLR-H 95
Query: 189 PNVIQIVGAYEDAVAVH----VVMELCAGGELFDRIIQRGHYTERK----AADLTRIIVG 240
N++ + A +V + G LFD + R T A G
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTAS---G 151
Query: 241 V-------VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+ V + HRDLK +N L D GL++
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT---CCIADLGLAVRHDSATD 202
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEF--ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
+LG G FG+ V + +K+ A K + ++ T + D E++ RE +IMH L +P +
Sbjct: 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLD-NPYI 72
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
++++G + A+ +VME+ GG L + G E +++ ++ V L
Sbjct: 73 VRLIGVCQAE-ALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 252 ---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRDL N L + + A K DFGLS
Sbjct: 130 NFVHRDLAARNVL-LVNRHYA--KISDFGLS 157
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 2e-12
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHL 185
E Y K+G+G +G + + + A K I +L E++ REI ++ L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRI---RLDAEDEGIPSTAIREISLLKEL 76
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAG--GELFDRIIQRGHYTERKAADLTRIIVGVVE 243
HPN++ ++ + +V E ++ D + + + ++ V
Sbjct: 77 H-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVA 133
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
CH ++HRDLKP+N L IN LK DFGL+ F
Sbjct: 134 HCHQHRILHRDLKPQN-LLINSDGA--LKLADFGLARAF 169
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 2e-12
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 16/250 (6%)
Query: 37 PKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVKINNNRQPPAPVPQQQQ 96
E + + + AP P+ + +N++ P P
Sbjct: 243 ADGLIYCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSP 302
Query: 97 EQSKKPAHVKRISSAGLQVGSVLGRKTGNLK--EMYSLGRKLGQGQFGTTFLCVEKATQK 154
++ + + + L K LK + +LG G FG+ V + +K
Sbjct: 303 DKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKK 362
Query: 155 EF--ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCA 212
+ A K + ++ T + D E++ RE +IMH L +P +++++G + A+ +VME+
Sbjct: 363 QIDVAIKVL--KQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAE-ALMLVMEMAG 418
Query: 213 GGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM---HRDLKPENFLFINQQEEA 269
GG L + G E +++ ++ V L HR+L N L + + A
Sbjct: 419 GGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVL-LVNRHYA 475
Query: 270 PLKTIDFGLS 279
K DFGLS
Sbjct: 476 --KISDFGLS 483
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 24/170 (14%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA---K--RKLTTEEDVEDVRREIRIMHHL 185
LG+ LG+G FG L K+ + K + TE+D+ D+ E+ +M +
Sbjct: 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 131
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGEL-------------FDRIIQRGHYTERKAA 232
H N+I ++GA ++V++E + G L + + +
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 233 DLTRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
DL V S +HRDL N L E+ +K DFGL+
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLA 238
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL---- 185
Y L RKLG G F T +L + A K I + + E EI+++ +
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMK-IVRGD---KVYTEAAEDEIKLLQRVNDAD 76
Query: 186 ------AGHPNVIQIVGA--YEDAVAVHV--VMELCAGGELFDRIIQRGH--YTERKAAD 233
G ++++++ ++ VHV V E+ G L I + H
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQ 135
Query: 234 LTRIIVGVVEACHS-LGVMHRDLKPENFLF---INQQEEAPLKTIDFGLSMF 281
+++ ++ ++ H G++H D+KPEN L + + +K D G + +
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 3e-12
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
+L ++LG GQFG L K A K I ++ + E ++ +E + M L+ HP
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYD-VAVKMI--KEGSMSE--DEFFQEAQTMMKLS-HPK 64
Query: 191 VIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH---S 247
+++ G +++V E + G L + + R H + + L + V E S
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L +++ K DFG++
Sbjct: 123 HQFIHRDLAARNCL-VDRDLCV--KVSDFGMT 151
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 131 SLGRKLGQGQFGT----TFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+ LG G FGT ++ + + A K + R+ T+ + +++ E +M +
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASVD 75
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
+P+V +++G + V ++ +L G L D + R H + L V + + +
Sbjct: 76 -NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMN 131
Query: 247 ---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++HRDL N L + +K DFGL+
Sbjct: 132 YLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLA 164
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 4e-12
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
L + +G+G+FG L + + A K I K + E +M L H N+
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGN--KVAVKCI---KNDATA--QAFLAEASVMTQLR-HSNL 248
Query: 192 IQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGV 250
+Q++G E+ +++V E A G L D + RG + L + + V EA L
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 251 M---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRDL N L E+ K DFGL+
Sbjct: 308 NNFVHRDLAARNVLV---SEDNVAKVSDFGLT 336
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEF-------ACKSIAKRKLTTEEDVEDVRREIRIMH 183
+LG+ LG+G FG + K+ A K + + TE+D+ D+ E+ +M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEMEMMK 95
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGEL-------------FDRIIQRGHYTERK 230
+ H N+I ++GA ++V++E + G L + I R +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 231 AADLTRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
DL + S +HRDL N L + E +K DFGL+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL-VT--ENNVMKIADFGLA 204
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 4e-12
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 15/155 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF---ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
R +G+G FG + + A KS+ ++T + VE RE +M L H
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMRGLN-H 81
Query: 189 PNVIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
PNV+ ++G HV++ G+L I R DL + V
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEY 139
Query: 248 LGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L HRDL N + E +K DFGL+
Sbjct: 140 LAEQKFVHRDLAARNCML---DESFTVKVADFGLA 171
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 5e-12
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
+ KLG GQ+G + V K A K++ K T +VE+ +E +M + HPN+
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDT-MEVEEFLKEAAVMKEIK-HPNL 278
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC---HSL 248
+Q++G +++ E G L D + + E A L + + A
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK 337
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HR+L N L E +K DFGLS
Sbjct: 338 NFIHRNLAARNCLV---GENHLVKVADFGLS 365
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 5e-12
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 23/168 (13%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
+LG+ +FG + +++A K + E+ R E + L
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ- 70
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGEL-------------FDRIIQRGHYTERKAADL 234
HPNV+ ++G + ++ C+ G+L R + + D
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 235 TRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ + S V+H+DL N L + ++ +K D GL
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRNVL-VY--DKLNVKISDLGLF 175
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 5e-12
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 131 SLGRKLGQGQFGTTF---LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
L R LG+G FG + K + A K+ +K T ++ E E IM +L
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMKNLD- 71
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH- 246
HP++++++G E+ ++MEL GEL + + K L + + +A
Sbjct: 72 HPHIVKLIGIIEEE-PTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 247 --SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
S+ +HRD+ N L + E K DFGLS
Sbjct: 129 LESINCVHRDIAVRNIL-VASPECV--KLGDFGLS 160
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 5e-12
Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
G+ LG G FG K +A K ++ + E + E+++M L
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGEL--FDRIIQRGHYTERKAADLTRIIVGVVEAC 245
H N++ ++GA + ++++ E C G+L + R +R ++E + + + E
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR-SKREKFSEDEIEYENQKRLEEEEDL 166
Query: 246 HSL----------------------GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ L +HRDL N L + +K DFGL+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL-VT--HGKVVKICDFGLA 219
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 6e-12
Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 131 SLGRKLGQGQFGTTF---LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
LGR +G+GQFG + A K+ + T++ E +E M
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--KNCTSDSVREKFLQEALTMRQF-D 449
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP++++++G + V ++MELC GEL + R A L + A
Sbjct: 450 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAY 506
Query: 248 LGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L HRD+ N L +K DFGLS
Sbjct: 507 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLS 538
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 8e-12
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF-------ACKSIAKRKLTTEEDVEDVRREIRIMHH 184
LG+ LG+G FG + K+ A K + + TE+D+ D+ E+ +M
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEMEMMKM 142
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFD-----RIIQRGHYTERKAA------- 232
+ H N+I ++GA ++V++E + G L + R + +
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 233 -DLTRIIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
DL + S +HRDL N L + E +K DFGL+
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVL-VT--ENNVMKIADFGLA 250
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 9e-12
Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 16/155 (10%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+ LG G FGT V + K I + + + V + + L
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLD- 73
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH- 246
H ++++++G + ++ +V + G L D + R H L V + + +
Sbjct: 74 HAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 247 --SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
G++HR+L N L + + ++ DFG++
Sbjct: 131 LEEHGMVHRNLAARNVLL---KSPSQVQVADFGVA 162
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 1e-11
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
L + +G+G+FG L + + A K I K + E +M L H N
Sbjct: 24 KLLQTIGKGEFGDVMLGDYRGN--KVAVKCI---KNDATA--QAFLAEASVMTQLR-HSN 75
Query: 191 VIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH--- 246
++Q++G E+ +++V E A G L D + RG + L + + V EA
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE 134
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL N L E+ K DFGL+
Sbjct: 135 GNNFVHRDLAARNVLV---SEDNVAKVSDFGLT 164
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 131 SLGRKLGQGQFGTTF---LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
LGR +G+GQFG + A K+ + T++ E +E M
Sbjct: 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--KNCTSDSVREKFLQEALTMRQFD- 74
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
HP++++++G + V ++MELC GEL + + A L + A
Sbjct: 75 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 131
Query: 248 LGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
L HRD+ N L +K DFGLS
Sbjct: 132 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLS 163
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-11
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 409 LHLNKIQREDHMY-AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG 467
L L ++ + +Y + + +G + + ++ GL D L I D D G
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKG 60
Query: 468 RIDYSEFVAMMQ 479
+ EF ++
Sbjct: 61 VLSKQEFFVALR 72
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 5e-10
Identities = 12/76 (15%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
++ + ++ ++ ++ N+G + + L++ + L D + + D D
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDG 58
Query: 396 SGTMDYGEFIAAMLHL 411
G + EF A+ L
Sbjct: 59 KGVLSKQEFFVAL-RL 73
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAGH 188
LG+ LG+G+FG + ++A K ++ + ++ D+ E ++ + H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NH 85
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGEL 216
P+VI++ GA + +++E G L
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSL 113
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 1e-11
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 15/155 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+ +G G+FG + + K + + A K++ + TE+ D E IM +
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIMGQFS- 104
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH- 246
H N+I++ G + ++ E G L + R E L ++ G+
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKY 162
Query: 247 --SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
++ +HRDL N L K DFGLS
Sbjct: 163 LANMNYVHRDLAARNILV---NSNLVCKVSDFGLS 194
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 2e-11
Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 29/171 (16%)
Query: 132 LGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVR-REIRIMHHLAGH 188
L +G+G++G + + + + A K ++ ++ R E+ L H
Sbjct: 12 LLECVGKGRYGEVW----RGSWQGENVAVK-----IFSSRDEKSWFRETELYNTVMLR-H 61
Query: 189 PNVIQIVGAYEDAVAVH----VVMELCAGGELFDRIIQRGHYTERKAADLTRIIV----- 239
N++ + + + ++ G L+D +Q + I
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASGLAH 120
Query: 240 ---GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+ + HRDLK +N L + D GL++
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ---CCIADLGLAVMHSQSTN 168
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 36/184 (19%)
Query: 113 LQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV 172
+ + Y + + +G+G FG + + A K + K +
Sbjct: 89 QVPHDHVAYR-------YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ-- 139
Query: 173 EDVRREIRIMHHLAGHP-----NVIQIVGA--YEDAVAVHV--VMELCAGGELFDRIIQR 223
EIRI+ HL NVI ++ + + H+ EL L++ +I++
Sbjct: 140 --AAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN----HICMTFELL-SMNLYE-LIKK 191
Query: 224 GHYTERKAADLTRI------IVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277
+ + L + I+ ++A H ++H DLKPEN L QQ + +K IDFG
Sbjct: 192 NKF---QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFG 247
Query: 278 LSMF 281
S +
Sbjct: 248 SSCY 251
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-11
Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 35/172 (20%)
Query: 132 LGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVR-REIRIMHHLAGH 188
+ +++G+G++G + ++ A K T E+ R EI + H
Sbjct: 41 MVKQIGKGRYGEVW----MGKWRGEKVAVK-----VFFTTEEASWFRETEIYQTVLMR-H 90
Query: 189 PNVIQIVGAYEDAVAVH----VVMELCAGGELFDRIIQRGHYTERK----AADLTRIIVG 240
N++ + A ++ + G L+D ++ + A G
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSVS---G 146
Query: 241 V-------VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ + HRDLK +N L D GL++ F
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT---CCIADLGLAVKFISD 195
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVR---REIRI 181
Y++ R + G +G V+ A K + D + REIR+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 182 MHHLAGHPNVIQIV-----GAYEDAVAVHVVMELCAGGELFDRIIQRGHYT---ERKAAD 233
++H HPN++ + +++V EL +L ++I +
Sbjct: 83 LNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTEL-MRTDL-AQVIHDQRIVISPQHIQYF 139
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ I++G+ H GV+HRDL P N L + + + DF L+
Sbjct: 140 MYHILLGL-HVLHEAGVVHRDLHPGNIL-LA--DNNDITICDFNLA 181
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 3e-11
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 14/153 (9%)
Query: 132 LGRKLGQGQFGTTF--LCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
++LG G FGT K K A K + K + +++ E +M L +P
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLD-NP 78
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+++++G E + +VME+ G L + Q H ++ ++ V L
Sbjct: 79 YIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVK---DKNIIELVHQVSMGMKYLE 134
Query: 250 VM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRDL N L + Q A K DFGLS
Sbjct: 135 ESNFVHRDLAARNVL-LVTQHYA--KISDFGLS 164
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVE-KATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHH 184
+ Y ++G+G +G F + K + A K + ++ T E+ + RE+ ++ H
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRH 67
Query: 185 L--AGHPNVIQ----IVGAYEDAVA-VHVVMELCAG--GELFDRIIQRGHYTERKAADLT 235
L HPNV++ + D + +V E D++ D+
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKDMM 126
Query: 236 RIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
++ ++ HS V+HRDLKP+N L + + +K DFGL+ + +
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNIL-VTSSGQ--IKLADFGLARIYSFQMAL 176
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 4e-11
Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 22/167 (13%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGH 188
L R+LG+G FG FL +A + L T +D +RE ++ +L H
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ-H 76
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGEL-------------FDRIIQRGHYTERKAADLT 235
++++ G D + +V E G+L R E + +
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 236 RIIVGVVEACHSLGVM---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
I + L HRDL N L + +K DFG+S
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCL-VG--ANLLVKIGDFGMS 180
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 5e-11
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMHHLAG 187
LG+ LG+G FG K C+++A + L T + + E++I+ H+
Sbjct: 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 84
Query: 188 HPNVIQIVGAY-EDAVAVHVVMELCAGGELFD 218
H NV+ ++GA + + V++E C G L
Sbjct: 85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 116
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-KR-KLTTEEDVEDVRREIRIMHHLAGH 188
L +LG+G FG FL E +A K K +E +D +RE ++ L H
Sbjct: 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ-H 102
Query: 189 PNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA------------DLTR 236
++++ G + + +V E G+L + G + A L
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 237 IIVGVVEACH---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ V L +HRDL N L + + +K DFG+S
Sbjct: 163 VASQVAAGMVYLAGLHFVHRDLATRNCL-VG--QGLVVKIGDFGMS 205
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 7e-11
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 22/156 (14%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN 190
L +LG GQFG ++ K A KS+ ++ + + E +M L H
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSL--KQGSMSP--DAFLAEANLMKQLQ-HQR 69
Query: 191 VIQIVGAYEDAVA----VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
++++ V ++++ E G L D + + L + + E
Sbjct: 70 LVRLYA-----VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 123
Query: 247 ---SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+HRDL+ N L + K DFGL+
Sbjct: 124 FIEERNYIHRDLRAANILV---SDTLSCKIADFGLA 156
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 8e-11
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 35/172 (20%)
Query: 132 LGRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHLAG 187
G K+G+G +G + K K++A K I E + REI ++ L
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI-------EGTGISMSACREIALLRELK- 76
Query: 188 HPNVIQ---IVGAYEDAVAVHVVMELCAGGELFD--RII--QRGHYTERKAADLTRIIV- 239
HPNVI + ++ D V ++ + D II R +K L R +V
Sbjct: 77 HPNVISLQKVFLSHADR-KVWLLFDYAE----HDLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 240 --------GVVEACHSLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFF 282
G+ H+ V+HRDLKP N L + + E +K D G + F
Sbjct: 132 SLLYQILDGI-HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 1e-10
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLM 388
P G + +++ EE A + F + SG+IT ++ + + + L + +
Sbjct: 16 TPFGGSLDTWAITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIW 72
Query: 389 QAGDIDNSGTMDYGEFIAAMLHL 411
D++N G MD EF AM L
Sbjct: 73 ALADMNNDGRMDQVEFSIAM-KL 94
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 8e-09
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEF 474
E + + K SG+IT D+ + Q GL L I D +NDGR+D EF
Sbjct: 29 VEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEF 88
Query: 475 VAMMQ 479
M+
Sbjct: 89 SIAMK 93
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 14/151 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
L +KLG GQFG ++ K A K++ VE E +M L H +
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTK-VAVKTMKP----GSMSVEAFLAEANVMKTLQ-HDKL 245
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
+++ ++++ E A G L D + +++ L + E +
Sbjct: 246 VKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 252 ---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRDL+ N L K DFGL+
Sbjct: 304 NYIHRDLRAANILV---SASLVCKIADFGLA 331
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-K--RKLTTEEDVEDVRREIRIMHHLAG 187
R +G+G FG F +A K ++ + + D +RE +M
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-D 108
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGEL 216
+PN+++++G + ++ E A G+L
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 14/151 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
L KLGQG FG ++ T + A K++ E +E ++M L H +
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKP----GTMSPEAFLQEAQVMKKLR-HEKL 241
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
+Q+ + +++V E + G L D + + L + + + M
Sbjct: 242 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM 299
Query: 252 ---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRDL+ N L + + K DFGL+
Sbjct: 300 NYVHRDLRAANIL-VGENLVC--KVADFGLA 327
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 60.7 bits (146), Expect = 7e-10
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 12/145 (8%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+S+E++ + F D +G + E+ + L +G N+ ++E +M D + G +
Sbjct: 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVV 778
Query: 400 DYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDII 458
+ FI M D + A+F YIT DEL+ L Q E I
Sbjct: 779 TFQAFIDFMSRETADTDTADQVMASFKILA-GDKNYITVDELRRE-----LPPDQAEYCI 832
Query: 459 REVDQDND-----GRIDYSEFVAMM 478
+ N G +DY F +
Sbjct: 833 ARMAPYNGRDAVPGALDYMSFSTAL 857
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 1e-05
Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFV 475
+ A+F++FD+ +G + ++ + G + + + I+ VD + G + + F+
Sbjct: 725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFI 784
Query: 476 AMMQD 480
M
Sbjct: 785 DFMSR 789
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 8e-10
Identities = 48/345 (13%), Positives = 98/345 (28%), Gaps = 101/345 (29%)
Query: 155 EFACKSIAKRKLTT-EEDVEDV-----RREIRIMHHLAG--HPNVIQIVGAY-------- 198
+CK + LTT + V D I + HH V ++ Y
Sbjct: 263 NLSCKIL----LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318
Query: 199 -EDAVAVH-VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC----------- 245
+ + + + + + D + ++ LT II E+
Sbjct: 319 PREVLTTNPRRLSII-AESIRDGLATWDNWKHVNCDKLTTII----ESSLNVLEPAEYRK 373
Query: 246 --HSLGVMHRDLK-PENFLFI---NQQEEAPLKTID--FGLSMFFRPGLTFRVWLRLHFL 297
L V P L + + + + ++ S+ + + + +
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI--SIPSI 431
Query: 298 FFQKQRQS----VLQTRLVRNLNEPGSLWPDKVAVPPIGDRV---IAESLSEEEIAGLKE 350
+ + + + L +V + N P + D + P + I L E
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491
Query: 351 MFKMIDTD---------NSG---------------------YIT---------LEELKKG 371
+F+M+ D + YI + +
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551
Query: 372 LQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416
L ++ NL+ S+ L++ M E I H ++QR
Sbjct: 552 LPKIEENLICSKYTDLLR------IALMAEDEAIFEEAH-KQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 1e-07
Identities = 73/569 (12%), Positives = 144/569 (25%), Gaps = 198/569 (34%)
Query: 6 VGPNLNSN-GFLQSVTAAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDTAPAP 64
V L N FL + +T +PS T ++ +D
Sbjct: 83 VEEVLRINYKFL----MSPIKTEQ----------RQPSMMTRMYIEQRD----------- 117
Query: 65 APTPTPIQSTPPPPVKINNNRQPPAPVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTG 124
+ + K N +R P ++ A L++ R
Sbjct: 118 -----RLYNDNQVFAKYNVSRLQP----------------YLKLRQALLEL-----RPAK 151
Query: 125 NLKEMYSLGRKLGQGQFGTTFL----CVEKATQKEFACK----SIAKRKLTTEEDVEDVR 176
N+ + G G T++ C+ Q + K ++ + E V
Sbjct: 152 NVL-ID------GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN--SPETV---- 198
Query: 177 REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTR 236
+ ++ L + + + I R H + + L +
Sbjct: 199 --LEMLQKLL-----------------YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 237 --------IIV------GVVEA----CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278
+++ A C L + R + +FL L L
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 279 SMFFRPGLTFRVWLRLHFLFFQKQRQSVLQTR------LVRNLNEPGSLW-------PDK 325
+ L +L Q + VL T + ++ + + W DK
Sbjct: 299 TPDEVKSL-LLKYLDCRP---QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 326 VAVPPIGDRVIAESLSEEEIAGLKEMFKMI-----DTD-----------NSGYITLEEL- 368
+ +I SL+ E A ++MF + + + +
Sbjct: 355 L------TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408
Query: 369 ----KKGLQRVGANLMDSEIDGLMQ--AGDIDNSGTM--------------DYGEFIAAM 408
K L I + ++N + D + I
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 409 L----------HLNKIQREDHMYAAFS--YFD---------KDGSGYITPDELQTACQQF 447
L HL I+ + F + D D + + + QQ
Sbjct: 469 LDQYFYSHIGHHLKNIEHPE-RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 448 GLDDTQLEDIIREVDQDNDGRI-DYSEFV 475
+ I + D + + +F+
Sbjct: 528 KF----YKPYICDNDPKYERLVNAILDFL 552
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 14/151 (9%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
L KLGQG FG ++ T + A K++ E +E ++M L H +
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKP----GTMSPEAFLQEAQVMKKLR-HEKL 324
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
+Q+ + +++V E + G L D + + L + + + M
Sbjct: 325 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM 382
Query: 252 ---HRDLKPENFLFINQQEEAPLKTIDFGLS 279
HRDL+ N L + + K DFGL+
Sbjct: 383 NYVHRDLRAANIL-VGENLVC--KVADFGLA 410
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 1e-09
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF 404
I +++++ ID D SG + E++K L+ G L ++ ++ A D+ +D+ F
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL-PCQLHQVIVARFADDELIIDFDNF 662
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
+ ++ L ++ F D + +G I
Sbjct: 663 VRCLVRLEI------LFKIFKQLDPENTGTIQ 688
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 2e-09
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDG--------LMQAGD 392
E+ G + +F + +++ I+ EL+ L+RV A D + DG ++ D
Sbjct: 527 EEDIGDGFRRLFAQLAGEDA-EISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLD 585
Query: 393 IDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LD 450
D SG + EF + K + D D SG + E++ A ++ G L
Sbjct: 586 EDGSGKLGLKEFYILWTKIQK------YQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP 639
Query: 451 DTQLEDIIREVDQDNDGRIDYSEFVAMM 478
+ I+ D++ ID+ FV +
Sbjct: 640 CQLHQVIVARFA-DDELIIDFDNFVRCL 666
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 37/175 (21%)
Query: 131 SLGRKLGQGQFGTTFLCVEKAT--QKEFACKSIAKRKLTTEEDVEDVR-REIRIMHHLAG 187
L +G+G++G V K + ++ A K + + + I + +
Sbjct: 16 KLLELIGRGRYGA----VYKGSLDERPVAVK-----VFSFANRQNFINEKNIYRVPLME- 65
Query: 188 HPNVIQIVGAYEDAVAVH-----VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVV 242
H N+ + + E A +VME G L + R+ V
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVT 121
Query: 243 ------------EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ + HRDL N L N DFGLSM
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT---CVISDFGLSMRLTGN 173
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 33/176 (18%)
Query: 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIA-KRKLTTEEDVEDVRREIRIMHHLAGHP 189
L +G+FG + +A K ++ E+ + + H
Sbjct: 27 QLLEVKARGRFGCVWKAQLLNEY-------VAVKIFPIQDKQSWQNEYEVYSLPGMK-HE 78
Query: 190 NVIQIVGAYEDAVAVHV----VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV---- 241
N++Q +GA + +V V + G L D ++ + +L I +
Sbjct: 79 NILQFIGAEKRGTSVDVDLWLITAFHEKGSLSD-FLKANVVSWN---ELCHIAETMARGL 134
Query: 242 ---------VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
++ H + HRD+K +N L + A DFGL++ F G +
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVL-LKNNLTA--CIADFGLALKFEAGKSA 187
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 6e-09
Identities = 40/185 (21%), Positives = 67/185 (36%), Gaps = 43/185 (23%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSI-AKRKLTTEEDVEDVRREIRIMHHLAGH 188
+ + RK+G G FG LC +K +A K + +K T + E I+ +
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT-----RSAKIEADILKKIQND 91
Query: 189 P----NVIQIVGA--YEDAVAVHV--VMELCAGGELFDRIIQRGH--YTERKAADLTRII 238
N+++ G Y D H+ + E G L++ I + + + I
Sbjct: 92 DINNNNIVKYHGKFMYYD----HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEI 146
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAP----------------------LKTIDF 276
+ + + + H DLKPEN L + E +K IDF
Sbjct: 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206
Query: 277 GLSMF 281
G + F
Sbjct: 207 GCATF 211
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 6e-09
Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL 185
+ Y + +G+G FG ++ Q+ A K I +K + + E+R++ +
Sbjct: 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ----AQIEVRLLELM 107
Query: 186 AGHP-----NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRII 238
H ++ + + + +V E+ L+D + + + +
Sbjct: 108 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQM 166
Query: 239 VGVVEACHS--LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281
+ + L ++H DLKPEN L N + + +K +DFG S
Sbjct: 167 CTALLFLATPELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQ 210
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 7e-09
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 427 FDK--DGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
FD +G+++ D+++ L L + D D+DG +D EF M
Sbjct: 21 FDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 3e-08
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
++ E+ A +F + +G+++ +++K L + L + + + DID+ G
Sbjct: 8 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGM 64
Query: 399 MDYGEFIAAMLHLNKIQREDH 419
+D EF AM L E
Sbjct: 65 LDRDEFAVAM-FLVYCALEKE 84
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 55.3 bits (132), Expect = 2e-08
Identities = 33/197 (16%), Positives = 58/197 (29%), Gaps = 42/197 (21%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
E K+G+G FG F + T K A + + ++ E++ EI I
Sbjct: 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78
Query: 184 HLAG--------HPNVIQIVGAY------------------------------EDAVAVH 205
L+ I + + +
Sbjct: 79 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 138
Query: 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265
+V+E GG +++ + + L ++ + A SL HRDL N L + +
Sbjct: 139 IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVL-LKK 197
Query: 266 QEEAPLKTIDFGLSMFF 282
L G S
Sbjct: 198 TSLKKLHYTLNGKSSTI 214
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 2e-08
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
Y + RKLG G F T +L + +K A K + K E E EIR++
Sbjct: 34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK-VVKS---AEHYTETALDEIRLLKS 89
Query: 185 LA----GHPNVIQIVGAYED-----AVAVHV--VMELCAGGELFDRIIQRGHYTERKAAD 233
+ PN +V +D H+ V E+ G L I + +Y
Sbjct: 90 VRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEV-LGHHLLK-WIIKSNYQGLPLPC 147
Query: 234 LTRIIVGVVEA---CHS-LGVMHRDLKPENFLF 262
+ +II V++ H+ ++H D+KPEN L
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 7e-08
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 419 HMYAAFSYFDKDG-SGYITPDEL----QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSE 473
YAA K+G ++ +EL Q L+D+ +E+D++ DG + + E
Sbjct: 14 EKYAA-----KEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEE 68
Query: 474 FVAMM 478
F ++
Sbjct: 69 FQVLV 73
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-07
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 342 EEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSE--IDGLMQAGDIDNSG 397
++ A LK +F+ + ++ EELK+ +Q +L+ +D L Q D + G
Sbjct: 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62
Query: 398 TMDYGEFIAAMLHLNK 413
+ + EF + +++
Sbjct: 63 EVSFEEFQVLVKKISQ 78
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 41/198 (20%), Positives = 67/198 (33%), Gaps = 46/198 (23%)
Query: 113 LQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEF-ACKSI-AKRKLTTEE 170
++G L + Y + LG+G FG C++ A K A K I K
Sbjct: 11 CRIGDWLQER-------YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--- 60
Query: 171 DVEDVRREIRIMHHLA-----GHPNVIQIVGA--YEDAVAVHV--VMELCAGGELFDRII 221
E R EI ++ + + + + H+ EL G F+ +
Sbjct: 61 --EAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELL-GKNTFEFLK 113
Query: 222 QRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP--------- 270
+ Y + + + H + H DLKPEN LF+N + E
Sbjct: 114 ENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173
Query: 271 -------LKTIDFGLSMF 281
++ DFG + F
Sbjct: 174 KSVKNTSIRVADFGSATF 191
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 52.6 bits (125), Expect = 2e-07
Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 11/124 (8%)
Query: 339 SLSEEEIAG--LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
S+ + + + + D + + +ELK L+ + + D + + D +
Sbjct: 2 SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQT 61
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED 456
+++ E + + + AF ++ + L F L Q E+
Sbjct: 62 DSLEDEEIETF---YKMLTQRAEIDRAFEEAAGSAE-TLSVERL----VTF-LQHQQREE 112
Query: 457 IIRE 460
Sbjct: 113 EAGP 116
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 411 LNKIQREDH-MYAAFSYFDKDGSGYITPDELQTACQQ--FGLDDTQLEDIIREVDQDNDG 467
+++ Q+ H +++ DK+ + EL+ ++ +DD I RE D
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTD 62
Query: 468 RIDYSEFVAM 477
++ E
Sbjct: 63 SLEDEEIETF 72
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 39/181 (21%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEF-ACKSI-AKRKLTTEEDVEDVRREIRIMHHLA- 186
Y + LG+G FG C++ A K + + E R EI+++ HL
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC-----EAARSEIQVLEHLNT 70
Query: 187 ----GHPNVIQIVGA--YEDAVAVHV--VMELCAGGELFDRIIQRGH--YTERKAADLTR 236
+Q++ + H+ V EL G +D I + G + +
Sbjct: 71 TDPNSTFRCVQMLEWFEHHG----HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAY 125
Query: 237 IIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP----------------LKTIDFGLSM 280
I V HS + H DLKPEN LF+ +K +DFG +
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 281 F 281
+
Sbjct: 186 Y 186
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 5e-07
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSE 473
+ ++ Y Y +G IT + + L +T L I + D D DG +D E
Sbjct: 46 VGKDKPTYDEIFYTLSPVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEE 105
Query: 474 FVAMM 478
F
Sbjct: 106 FALAN 110
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 4e-04
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
++ E+F + +G IT KK + + + L ++ + + + D+D G +D
Sbjct: 46 VGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK--SKLPNTVLGKIWKLADVDKDGLLD 102
Query: 401 YGEFIAAM 408
EF A
Sbjct: 103 DEEFALAN 110
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 2e-06
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 18/74 (24%)
Query: 424 FSYFDKDGSGYITPDELQTACQQF---------GLDDTQL---------EDIIREVDQDN 465
F D + G + EL+ + DD + E +++ VD +
Sbjct: 26 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 466 DGRIDYSEFVAMMQ 479
D + EF+A Q
Sbjct: 86 DRLVTLEEFLASTQ 99
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 6e-06
Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 12/137 (8%)
Query: 352 FKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411
F + D G + K + G++ ++ + + E L
Sbjct: 34 FNQLQVD--GVLLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQL 91
Query: 412 NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF------GLDDTQLED----IIREV 461
++ + F DK+ G +T +E++ + ++ I+ E+
Sbjct: 92 TDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEEL 151
Query: 462 DQDNDGRIDYSEFVAMM 478
D N G I+ + A++
Sbjct: 152 DPTNLGYIEMEDLEALL 168
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 2e-05
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 349 KEMFKMID---TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEF- 404
+MF + +T +ELK +++ D+ + D + G + E
Sbjct: 62 VQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVK 121
Query: 405 -----IAAMLHLNKIQREDHMYAA--FSYFDKDGSGYITPDELQTACQQ 446
A+ L+KI+ Y A D GYI ++L+ Q
Sbjct: 122 EIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 8e-06
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 426 YFDKDG-SGYITPDELQTA-CQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
Y G + D+L+ + + + +E+D + DG +++ EF+ ++
Sbjct: 19 YSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILV 75
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 1e-04
Identities = 12/73 (16%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 342 EEEIAGLKEMFKM--IDTDNSGYITLEELKKGLQRVGANLMDSE-IDGLMQAGDIDNSGT 398
E+ + + +++ + N + ++LKK L+ + + D + DI+ G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 399 MDYGEFIAAMLHL 411
+++ EF+ ++ +
Sbjct: 66 VNFQEFLILVIKM 78
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-05
Identities = 9/67 (13%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 419 HMYAAFSYFDKDGSGYITPDELQTA-CQQFG------LDDTQLEDIIREVDQDNDGRIDY 471
+ Y + I+ + ++ + + +I+ +D ++DGRI +
Sbjct: 18 YKYVSK---YSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISF 74
Query: 472 SEFVAMM 478
E+ ++
Sbjct: 75 DEYWTLI 81
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-05
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 342 EEEIAGLKEMFKM---IDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDI 393
E+ + L E F + I+ ++ LQ+ +++ D L+Q D
Sbjct: 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDA 66
Query: 394 DNSGTMDYGEFIAAMLHL 411
++ G + + E+ + +
Sbjct: 67 NHDGRISFDEYWTLIGGI 84
|
| >2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus} Length = 550 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 2e-05
Identities = 14/67 (20%), Positives = 25/67 (37%)
Query: 413 KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYS 472
+ ++ Y Y G ++ + +T L ++ L I + D D DG +D
Sbjct: 452 VVTKDKSKYDEIFYNLAPADGKLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDDE 511
Query: 473 EFVAMMQ 479
EF
Sbjct: 512 EFALASH 518
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-05
Identities = 7/58 (12%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 426 YFDKDGS-GYITPDEL----QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
+ ++G ++ +E D L++ ++ +D + D + ++E+ ++
Sbjct: 31 FARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLI 88
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 6e-04
Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 342 EEEIAGLKEMFKM--IDTDNSGYITLEELKKGLQRVGANLMDSE--IDGLMQAGDIDNSG 397
EE I + F +++ E K+ + + +L+ +D M++ D++
Sbjct: 18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 77
Query: 398 TMDYGEFIAAMLHL 411
+ + E+ + L
Sbjct: 78 ELKFNEYWRLIGEL 91
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 4e-05
Identities = 11/65 (16%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 419 HMYAAFSYFDKDG-SGYITPDEL----QTACQQFGLDDTQLEDIIREVDQDNDGRIDYSE 473
H Y+ ++G ++ EL + + ++ ++D+++ +D+++D ID+ E
Sbjct: 17 HKYSG-----REGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKE 71
Query: 474 FVAMM 478
+ +
Sbjct: 72 YSVFL 76
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 37.8 bits (88), Expect = 7e-04
Identities = 14/74 (18%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 342 EEEIAGLKEMFKM--IDTDNSGYITLEELKKGLQR-VGANLMDSE-IDGLMQAGDIDNSG 397
E+ + + F + ++ +ELK+ +++ + M ID LM++ D ++
Sbjct: 6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQ 65
Query: 398 TMDYGEFIAAMLHL 411
+D+ E+ + L
Sbjct: 66 EIDFKEYSVFLTML 79
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-05
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 11/67 (16%)
Query: 419 HMYAAFSYFDKDGSGYITPDEL----QTACQQF---GLDDTQLEDIIREVDQDNDGRIDY 471
H Y+ + + EL F D+ + ++ +D + D +D+
Sbjct: 17 HKYSG----KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDF 72
Query: 472 SEFVAMM 478
E+ +
Sbjct: 73 QEYCVFL 79
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 8e-05
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 339 SLSEEEIAGLKEMFKM--IDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAG 391
E+ + + F + + ELK+ L R + + ++ LM
Sbjct: 3 CPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL 62
Query: 392 DIDNSGTMDYGEFIAAMLHL 411
D + +D+ E+ + +
Sbjct: 63 DSNRDNEVDFQEYCVFLSCI 82
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 1e-04
Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 7/80 (8%)
Query: 339 SLSEEEIAGLKEMFKM--IDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAG 391
S E+ + + F + + ELK+ L R + + ++ LM
Sbjct: 6 SPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNL 65
Query: 392 DIDNSGTMDYGEFIAAMLHL 411
D + +D+ E+ + +
Sbjct: 66 DSNRDNEVDFQEYCVFLSSI 85
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 1e-04
Identities = 9/67 (13%), Positives = 23/67 (34%), Gaps = 11/67 (16%)
Query: 419 HMYAAFSYFDKDGSGYITPDELQTACQ-------QFGLDDTQLEDIIREVDQDNDGRIDY 471
H Y+ + + EL+ D+ + ++ +D + D +D+
Sbjct: 20 HKYSG----KEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDF 75
Query: 472 SEFVAMM 478
E+ +
Sbjct: 76 QEYCVFL 82
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 1e-04
Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 7/77 (9%)
Query: 342 EEEIAGLKEMFKM--IDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDID 394
E+ + + F + + ELK+ L R + + ++ LM D +
Sbjct: 18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 77
Query: 395 NSGTMDYGEFIAAMLHL 411
+D+ E+ + +
Sbjct: 78 RDNEVDFQEYCVFLSCI 94
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 2e-04
Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 11/67 (16%)
Query: 419 HMYAAFSYFDKDGSGYITPDELQT-------ACQQFGLDDTQLEDIIREVDQDNDGRIDY 471
H Y+ + + EL+ + D+ + ++ +D + D +D+
Sbjct: 29 HKYSG----KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDF 84
Query: 472 SEFVAMM 478
E+ +
Sbjct: 85 QEYCVFL 91
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 1e-04
Identities = 10/66 (15%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 419 HMYAAFSYFDKDG-SGYITPDELQTA-CQQFGL----DDTQLEDIIREVDQDNDGRIDYS 472
H Y+ ++G ++ EL+ ++ + D ++ ++ ++D++ D +++
Sbjct: 17 HKYS-----GREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQ 71
Query: 473 EFVAMM 478
E+V +
Sbjct: 72 EYVTFL 77
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 11/67 (16%)
Query: 419 HMYAAFSYFDKDGSGYITPDEL----QTACQQFG---LDDTQLEDIIREVDQDNDGRIDY 471
H Y+ K ++ EL D +++I + +D + D ++D+
Sbjct: 19 HQYSV----RKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDF 74
Query: 472 SEFVAMM 478
EF++++
Sbjct: 75 QEFISLV 81
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 420 MYAAFSYFDKDGSGYITPDELQTA-CQQFG------LDDTQLEDIIREVDQDNDGRIDYS 472
M F F D GY+T ++L+ ++F D ++ I++++DQ DG++ +
Sbjct: 11 MMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQ 69
Query: 473 EFVAMM 478
F +++
Sbjct: 70 SFFSLI 75
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDIDNS 396
E + + F D GY+T E+L+ +++ + +D +M+ D
Sbjct: 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 397 GTMDYGEFIAAMLHL 411
G + + F + + L
Sbjct: 64 GKVGFQSFFSLIAGL 78
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 426 YFDKDG-SGYITPDEL----QTACQQF---GLDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
+ K+G ++ EL QT F D ++ I++E+D++ DG +D+ EFV +
Sbjct: 18 HSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVL 77
Query: 478 M 478
+
Sbjct: 78 V 78
|
| >1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A Length = 264 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 3e-04
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 1/90 (1%)
Query: 21 AAVWRTRPPEDRLPPPPKNEPSDNTERSLKAKDQSKASDTAPAPAPTPTPIQSTPPPPVK 80
A+WR R P P +N + ++ A P P P K
Sbjct: 18 TAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQNPRPRPPPRQKKQAPK 77
Query: 81 INNNRQPPAPVP-QQQQEQSKKPAHVKRIS 109
+ P P +++Q KP +R++
Sbjct: 78 QPPKPKKPKPQEKKKKQPAKTKPGKRQRMA 107
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 39.1 bits (91), Expect = 3e-04
Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Query: 426 YFDKDG-SGYITPDEL----QTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
Y + G + EL Q + + + +D + D +D+ E+V
Sbjct: 19 YAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRS 78
Query: 478 M 478
+
Sbjct: 79 L 79
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 38.2 bits (89), Expect = 6e-04
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 342 EEEIAGLKEMFKM--IDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDID 394
E+ + L ++F + + ELK+ + ++ + +D +M+ D +
Sbjct: 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSN 64
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKD 430
G D+ EF+A + + A +F+ +
Sbjct: 65 GDGECDFQEFMAFVAMI--------TTACHEFFEHE 92
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 37.5 bits (87), Expect = 9e-04
Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 426 YFDKDG-SGYITPDEL----QTACQQF---GLDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
Y ++G + EL F + ++ ++ +D + DG D+ EF+A
Sbjct: 18 YSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAF 77
Query: 478 M 478
+
Sbjct: 78 V 78
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 37.9 bits (88), Expect = 8e-04
Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 419 HMYAAFSYFDKDGSGYITPDELQTACQ-------QFGLDDTQLEDIIREVDQDNDGRIDY 471
Y+ + + +T EL+ + Q G D ++ +++++D + D ++D+
Sbjct: 16 SRYSG----SEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDF 71
Query: 472 SEFVAMM 478
SEF+ +
Sbjct: 72 SEFIVFV 78
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 489 | |||
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.98 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.98 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.98 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.98 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.98 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.98 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.98 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.98 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.98 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.98 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.98 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.98 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.98 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.98 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.98 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.98 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.97 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.97 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.97 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.97 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.97 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.97 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.97 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.97 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.97 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.97 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.97 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.97 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.97 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.97 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.97 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.97 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.97 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.97 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.97 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.97 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.97 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.97 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.97 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.97 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.97 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.97 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.97 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.97 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.97 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.97 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.97 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.97 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.96 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.96 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.96 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.96 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.96 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.96 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.96 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.96 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.96 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.96 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.96 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.96 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.96 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.96 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.96 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.96 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.96 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.96 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.96 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.96 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.96 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.96 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.96 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.96 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.96 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.96 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.96 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.96 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.96 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.96 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.96 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.96 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.96 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.96 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.96 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.96 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.96 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.96 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.96 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.96 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.96 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.96 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.96 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.95 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.95 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.95 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.95 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.95 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.95 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.95 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.95 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.95 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.95 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.94 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.94 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.93 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.93 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.93 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.93 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.93 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.92 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.92 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.92 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.91 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.91 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.9 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.9 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.9 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.9 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.9 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.9 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.9 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.9 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.89 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.89 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.89 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.89 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.89 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.89 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.89 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.89 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.89 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.88 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.88 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.88 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.88 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.88 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.88 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.88 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.88 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.87 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.87 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.87 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.87 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.87 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.87 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.87 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.87 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.86 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.86 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.86 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.86 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.86 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.86 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.85 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.85 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.85 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.85 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.85 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.85 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.85 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.85 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.84 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.84 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.84 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.84 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.83 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.83 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.83 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.83 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.83 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.83 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.82 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.82 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.82 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.82 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.82 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.81 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.81 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.81 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.81 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.81 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.8 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.8 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.79 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.78 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.78 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.77 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.77 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.77 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.76 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.75 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.75 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.7 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.7 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.7 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.7 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.7 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.69 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.68 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.67 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.66 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.66 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.65 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.62 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.62 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.61 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.6 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.59 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.57 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.57 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.55 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.54 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.53 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.52 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.52 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.52 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.5 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.49 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.47 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.45 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.45 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.45 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.45 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.43 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.4 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.4 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.39 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.38 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.38 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.37 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.36 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.36 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.36 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.35 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.35 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.35 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.34 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.34 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.33 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.33 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.33 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.31 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.31 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.3 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.3 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.29 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.28 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.28 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.28 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.28 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.28 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.27 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.27 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.27 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.27 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.27 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.27 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.27 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.27 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.27 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.27 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.26 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 99.26 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.26 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.25 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.25 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.25 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.24 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.23 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.23 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.23 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.23 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.23 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.23 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.22 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.22 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.22 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.21 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.21 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.21 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 99.21 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.21 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 99.21 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.21 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 99.21 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.21 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.21 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.2 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.2 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.2 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 99.2 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.2 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.2 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.2 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.2 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.19 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.19 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.19 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 99.19 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.19 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 99.18 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.18 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.18 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.17 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.17 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.17 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.17 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.16 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.16 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.16 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.16 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.16 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.16 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.16 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.15 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 99.15 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.15 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.14 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.14 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.14 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.14 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.14 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 99.13 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.13 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.13 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.13 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.13 | |
| 1h8b_A | 75 | ACT-EF34, alpha-actinin 2, skeletal muscle isoform | 99.13 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.12 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.12 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.12 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.12 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.11 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.11 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 99.1 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.1 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.1 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.1 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.1 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 99.09 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.09 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.09 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.09 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 99.08 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.08 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.08 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.08 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.08 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.08 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.08 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.07 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.07 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.07 |
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-57 Score=474.10 Aligned_cols=366 Identities=31% Similarity=0.501 Sum_probs=301.9
Q ss_pred cccccccccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH----------HHHHHHHHHHHHHHHh
Q 040003 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE----------EDVEDVRREIRIMHHL 185 (489)
Q Consensus 116 ~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~----------~~~~~~~~E~~~l~~l 185 (489)
+.......+.+.+.|+++++||+|+||+||+|.++.+++.||+|++.+...... ...+.+.+|+.+|++|
T Consensus 24 ~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 103 (504)
T 3q5i_A 24 GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103 (504)
T ss_dssp GGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC
T ss_pred hheeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC
Confidence 344555666778889999999999999999999999999999999976543211 3356789999999999
Q ss_pred cCCCCeeEEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC
Q 040003 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265 (489)
Q Consensus 186 ~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~ 265 (489)
+|||||+++++|.+...+|||||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...
T Consensus 104 -~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~ 182 (504)
T 3q5i_A 104 -DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK 182 (504)
T ss_dssp -CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST
T ss_pred -CCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC
Confidence 8999999999999999999999999999999999988899999999999999999999999999999999999999654
Q ss_pred CCCCCeEEEeeccccccCCCCceee--------------------------------eeeccCCCCcchhHHHHHHHhcc
Q 040003 266 QEEAPLKTIDFGLSMFFRPGLTFRV--------------------------------WLRLHFLFFQKQRQSVLQTRLVR 313 (489)
Q Consensus 266 ~~~~~~kl~DFGla~~~~~~~~~~~--------------------------------~~~~~ypf~~~~~~~~~~~i~~~ 313 (489)
+....+||+|||+|+.+........ ++++..||.+.+...++..+..+
T Consensus 183 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~ 262 (504)
T 3q5i_A 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG 262 (504)
T ss_dssp TCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred CCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 4445799999999987654322111 33445588888878888888888
Q ss_pred cccCCCCCCCCCC-----------------------C---------CCCC---------------------------cch
Q 040003 314 NLNEPGSLWPDKV-----------------------A---------VPPI---------------------------GDR 334 (489)
Q Consensus 314 ~~~~~~~~~~~~~-----------------------~---------~~~~---------------------------~~~ 334 (489)
.+.++...|.... . .... ...
T Consensus 263 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~ 342 (504)
T 3q5i_A 263 KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAIL 342 (504)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHH
T ss_pred CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777654442211 0 0000 001
Q ss_pred hhhhh-ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh--------CCCCCHHHHHHHHHccCCCCCcceehHHHH
Q 040003 335 VIAES-LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV--------GANLMDSEIDGLMQAGDIDNSGTMDYGEFI 405 (489)
Q Consensus 335 ~~~~~-~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l--------g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~ 405 (489)
.+... ++.+++.+++++|+.+|.|++|.|+.+||..+|+.+ +...++.++..+|+.+|.|++|.|+|+||+
T Consensus 343 ~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~ 422 (504)
T 3q5i_A 343 FIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFI 422 (504)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred HhhccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 12222 377889999999999999999999999999999888 567888999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 406 AAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 406 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.++........++.+..+|+.||+|++|+|+.+||+.++...++++++++++|+.+|.|+||+|+|+||+.+|.+.+
T Consensus 423 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 423 SVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp HHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred HHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 98865544556788999999999999999999999999988889999999999999999999999999999998753
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-57 Score=473.69 Aligned_cols=365 Identities=32% Similarity=0.537 Sum_probs=301.0
Q ss_pred cccccccccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEE
Q 040003 116 GSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIV 195 (489)
Q Consensus 116 ~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 195 (489)
+..+....+.+.+.|+++++||+|+||+||+|+++.++..||+|++.+.... ......+.+|+.+|+.+ +|||||+++
T Consensus 25 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~ 102 (494)
T 3lij_A 25 GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLL-DHPNIMKLY 102 (494)
T ss_dssp GGGCCCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred hheeecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence 3445556667788899999999999999999999999999999999765432 22346788999999999 899999999
Q ss_pred EEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 196 GAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 196 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
++|.+...+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||+...+..+.+||+|
T Consensus 103 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEE
Confidence 99999999999999999999999999888999999999999999999999999999999999999996655567799999
Q ss_pred eccccccCCCCceee--------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCC
Q 040003 276 FGLSMFFRPGLTFRV--------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWP 323 (489)
Q Consensus 276 FGla~~~~~~~~~~~--------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~ 323 (489)
||+|+.+........ ++++..||.+.+...++..+..+.+.++...|.
T Consensus 183 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 262 (494)
T 3lij_A 183 FGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK 262 (494)
T ss_dssp CTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGT
T ss_pred CCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcc
Confidence 999987654322111 344555888888888888888888888776663
Q ss_pred CCC-----------------------CC------------------C---C----------------Ccchhhhhh-ccH
Q 040003 324 DKV-----------------------AV------------------P---P----------------IGDRVIAES-LSE 342 (489)
Q Consensus 324 ~~~-----------------------~~------------------~---~----------------~~~~~~~~~-~~~ 342 (489)
... ++ . . .....+... .+.
T Consensus 263 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~ 342 (494)
T 3lij_A 263 NVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQ 342 (494)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCH
T ss_pred cCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccH
Confidence 321 00 0 0 000111222 367
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC--------CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA--------NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI 414 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~--------~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~ 414 (489)
+++.+++++|+.+|.|++|.|+.+||..+|+.++. ..++.+++.+|+.+|.|++|.|+|+||+.++......
T Consensus 343 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~ 422 (494)
T 3lij_A 343 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSL 422 (494)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcc
Confidence 88999999999999999999999999999999864 4457899999999999999999999999988655555
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
..++.+..+|+.||+|+||+|+.+||+.++...++++++++++|+.+|.|+||+|+|+||+.+|++.+
T Consensus 423 ~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 423 LSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp TCHHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 56788999999999999999999999999987678999999999999999999999999999998653
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-57 Score=469.11 Aligned_cols=358 Identities=30% Similarity=0.518 Sum_probs=300.7
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
...+.+.|++.+.||+|+||+||+|++..+++.||||++.+.........+.+.+|+.+|+++ +|||||++++++.+..
T Consensus 21 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 99 (484)
T 3nyv_A 21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKG 99 (484)
T ss_dssp CCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred CCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCC
Confidence 445667899999999999999999999999999999999876554445567899999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|+|||||.+|+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||+...+..+.+||+|||+|+.+
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999999999998889999999999999999999999999999999999999966556788999999999876
Q ss_pred CCCCceee--------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCC----
Q 040003 283 RPGLTFRV--------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV---- 326 (489)
Q Consensus 283 ~~~~~~~~--------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 326 (489)
........ ++++..||.+.+...++..+..+.+.++...|....
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 259 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK 259 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHH
T ss_pred ccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHH
Confidence 54332110 345556888888888888888888887766663211
Q ss_pred -------------------CC---------C-------CC--------------------cchhhhhh-ccHHHHHHHHH
Q 040003 327 -------------------AV---------P-------PI--------------------GDRVIAES-LSEEEIAGLKE 350 (489)
Q Consensus 327 -------------------~~---------~-------~~--------------------~~~~~~~~-~~~~~~~~l~~ 350 (489)
.+ . .. ....+... ++.+++.++++
T Consensus 260 ~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~ 339 (484)
T 3nyv_A 260 DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTA 339 (484)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 00 0 00 00111112 35678889999
Q ss_pred HHhhhcCCCCCCccHHHHHHHH----HHhCCCCC-------HHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHH
Q 040003 351 MFKMIDTDNSGYITLEELKKGL----QRVGANLM-------DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDH 419 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~~l----~~lg~~~~-------~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~ 419 (489)
+|..+|.|++|.|+.+||..++ +.+|..++ +.++..+|+.+|.|++|.|+|+||+.++........++.
T Consensus 340 ~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~ 419 (484)
T 3nyv_A 340 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRER 419 (484)
T ss_dssp HHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHH
Confidence 9999999999999999995554 44576676 789999999999999999999999998876655566788
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+..+|+.||+|+||+|+.+||+.++...++++++++++|+.+|.|+||+|+|+||+.+|.+.
T Consensus 420 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 420 LERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp HHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 99999999999999999999999999888999999999999999999999999999999864
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=466.36 Aligned_cols=356 Identities=33% Similarity=0.571 Sum_probs=279.7
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+.+.|+++++||+|+||+||+|++..+++.||||++.+.... ......+.+|+++|+++ +|||||++++++.+..
T Consensus 17 ~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 94 (486)
T 3mwu_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSS 94 (486)
T ss_dssp CCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred cCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCC
Confidence 345667899999999999999999999999999999999754321 12346788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||+...+..+.+||+|||+|+.+
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999999999988889999999999999999999999999999999999999976566778999999999876
Q ss_pred CCCCceee--------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCC----
Q 040003 283 RPGLTFRV--------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV---- 326 (489)
Q Consensus 283 ~~~~~~~~--------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 326 (489)
........ ++++..||.+.+...++..+..+.+.++...|....
T Consensus 175 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 254 (486)
T 3mwu_A 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254 (486)
T ss_dssp CCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHH
T ss_pred CCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHH
Confidence 54322111 344555888888888888888888887766663211
Q ss_pred ---------------C------------C-CCC----------------------------cchhhhhh-ccHHHHHHHH
Q 040003 327 ---------------A------------V-PPI----------------------------GDRVIAES-LSEEEIAGLK 349 (489)
Q Consensus 327 ---------------~------------~-~~~----------------------------~~~~~~~~-~~~~~~~~l~ 349 (489)
. . ... ....+... ++.+++.+++
T Consensus 255 ~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~ 334 (486)
T 3mwu_A 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLT 334 (486)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 0 0 000 00011112 3677889999
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHH----HhCCCCC----------HHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhh
Q 040003 350 EMFKMIDTDNSGYITLEELKKGLQ----RVGANLM----------DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQ 415 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l~----~lg~~~~----------~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~ 415 (489)
++|+.+|.|++|.|+.+||..++. .+|..++ +.++..+|+.+|.|++|.|+|+||+.++.......
T Consensus 335 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 414 (486)
T 3mwu_A 335 EIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILL 414 (486)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTC
T ss_pred HHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccc
Confidence 999999999999999999965554 4566655 88999999999999999999999998886555555
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.++.+..+|+.||+|+||+|+.+||+.++..+| +++++++++|+.+|.|+||+|+|+||+.+|.+
T Consensus 415 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 481 (486)
T 3mwu_A 415 SRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481 (486)
T ss_dssp CHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 678899999999999999999999999999888 78899999999999999999999999999975
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=351.52 Aligned_cols=153 Identities=34% Similarity=0.557 Sum_probs=142.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+++|++| +|||||+++++|++.+.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEE
Confidence 3599999999999999999999999999999999875443344567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCC
Confidence 9999999999999999999999999999999999999999999999999999999 7788999999999998754
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-43 Score=332.71 Aligned_cols=234 Identities=29% Similarity=0.441 Sum_probs=169.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+++|++| +|||||+++++|.+.+.+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 4599999999999999999999999999999999877665556667899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||| +|+|.+++.+++.+++..++.+++||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.......
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCCc
Confidence 9999 78999999999999999999999999999999999999999999999999 7788999999999988765443
Q ss_pred ee-eeeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 288 FR-VWLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 288 ~~-~~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
.. .+++..| ++ +-++.++++.+++.|..+|.+....... .+.. ........++++-.+-+.
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~-- 244 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN-GVYTLPKFLSPGAAGLIK-- 244 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-TCCCCCTTSCHHHHHHHH--
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCHHHHHHHH--
Confidence 22 2333333 22 2245678888888888888654221000 0000 000112234444433333
Q ss_pred HhhhcCCCCCCccHHHHHH
Q 040003 352 FKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~ 370 (489)
+++..|++.|++.+|+.+
T Consensus 245 -~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 245 -RMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -HHSCSSGGGSCCHHHHHH
T ss_pred -HHccCChhHCcCHHHHHc
Confidence 567888888888888754
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=350.86 Aligned_cols=237 Identities=20% Similarity=0.212 Sum_probs=182.1
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.++..+.|+++++||+|+||+||+|+++.+|+.||||++...... ..+.+.+|+.+|+.| +|||||+++++|.+.+
T Consensus 146 ~~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~ 221 (423)
T 4fie_A 146 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGD 221 (423)
T ss_dssp SSCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred CCChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhC-CCCCCCceEEEEEECC
Confidence 345567899999999999999999999999999999999765432 335688999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|||||||+||+|.+++. .+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+
T Consensus 222 ~~~iVmEy~~gG~L~~~i~-~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~ 297 (423)
T 4fie_A 222 ELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQV 297 (423)
T ss_dssp EEEEEEECCTTEEHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCCcHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceEC
Confidence 9999999999999999875 4679999999999999999999999999999999999999 77889999999999987
Q ss_pred CCCCce--eeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCc--chhhhhhccHHH
Q 040003 283 RPGLTF--RVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIG--DRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~--~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~ 344 (489)
...... +.+++..| +|. -++.++++.+++.|..+|.+....... .+.... .......++.+-
T Consensus 298 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~ 377 (423)
T 4fie_A 298 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL 377 (423)
T ss_dssp CSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHH
T ss_pred CCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHH
Confidence 654332 22444444 222 245688999999999888654210000 000000 000112344444
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+.+. +++..|++.|++.+|+..
T Consensus 378 ~dli~---~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 378 KGFLD---RLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred HHHHH---HHcCCChhHCcCHHHHhc
Confidence 44443 567888888888888753
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=340.07 Aligned_cols=236 Identities=20% Similarity=0.214 Sum_probs=181.2
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
++..+.|+++++||+|+||+||+|+++.+|+.||||++.+..... .+.+.+|+++|++| +|||||+++++|.+.+.
T Consensus 70 ~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~ 145 (346)
T 4fih_A 70 GDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDY-QHENVVEMYNSYLVGDE 145 (346)
T ss_dssp SCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred CChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence 344567999999999999999999999999999999997654332 35678999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|||||||+||+|.+++.+ +.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+.
T Consensus 146 ~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp EEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECC
T ss_pred EEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecC
Confidence 9999999999999998764 689999999999999999999999999999999999999 778899999999999876
Q ss_pred CCCce--eeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCc--chhhhhhccHHHH
Q 040003 284 PGLTF--RVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIG--DRVIAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~--~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 345 (489)
..... +.+++..| +|. -++.++++.+++.|..+|.+....... .+.... .......++.+-.
T Consensus 222 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~ 301 (346)
T 4fih_A 222 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLK 301 (346)
T ss_dssp SSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHH
T ss_pred CCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHH
Confidence 54332 22334334 222 245688999999999888654210000 000000 0001123444444
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+. +++..|++.|++.+|+..
T Consensus 302 dli~---~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 302 GFLD---RLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHH---HHSCSSTTTSCCHHHHTT
T ss_pred HHHH---HHcCCChhHCcCHHHHhc
Confidence 4444 567888888898888753
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=340.09 Aligned_cols=235 Identities=19% Similarity=0.329 Sum_probs=172.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|+++++||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+++|++| +|||||+++++|.+.+.+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEE
Confidence 579999999999999999999999999999999987654 455678899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||+||+|.++|... ..+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+...
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecCC
Confidence 9999999999999754 357999999999999999999999999999999999999 77889999999999987543
Q ss_pred Ccee--eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 286 LTFR--VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 286 ~~~~--~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
.... .+++..| +|. -++.++++.+++.|..+|......... .+.......+...++.+-.+.+.
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~ 258 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS 258 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence 2211 1223333 222 134467777777777777543211000 00000000011234444333333
Q ss_pred HHHhhhcCCCCCCccHHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~ 370 (489)
+++..|++.|++.+|+..
T Consensus 259 ---~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 259 ---QLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---HHTCSSGGGSCCHHHHHT
T ss_pred ---HHccCChhHCcCHHHHhc
Confidence 567888889999988753
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=330.95 Aligned_cols=231 Identities=19% Similarity=0.198 Sum_probs=179.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||+||+|+++.+|+.||||++++.... .+|+.+|+.| +|||||+++++|.+.+.+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l-~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGL-SSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--------HHHHHHHHhC-CCCCCCcEEEEEEECCEEEEE
Confidence 4589999999999999999999999999999999765332 4699999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC-CeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA-PLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~-~~kl~DFGla~~~~~~~ 286 (489)
||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||| +.++ .+||+|||+|+.+....
T Consensus 129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL---SSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE---CTTSCCEEECCCTTCEEC----
T ss_pred EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---eCCCCEEEEeeCCCCeEccCCC
Confidence 9999999999999998999999999999999999999999999999999999999 5555 69999999999876432
Q ss_pred cee-------eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC--CCCcchhhhhhccHH
Q 040003 287 TFR-------VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV--PPIGDRVIAESLSEE 343 (489)
Q Consensus 287 ~~~-------~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~ 343 (489)
... .+++..| +|. -++.++++.+++.|..+|......... .+ .......+...++.+
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPL 285 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHH
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHH
Confidence 211 1233334 332 235589999999999999765322110 00 000011123345555
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
-.+.+. +++..|++.|++..|+...|.
T Consensus 286 ~~~li~---~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 286 TAQAIQ---EGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp HHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHH---HHccCCHhHCcCHHHHHHHHH
Confidence 444444 568889999999999876553
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-42 Score=330.01 Aligned_cols=187 Identities=26% Similarity=0.377 Sum_probs=146.7
Q ss_pred cceeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
++|++++.||+|+||+||+|++. .+++.||||++.+..... ....++.+|+++|++| +|||||+++++|.+.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCC-CCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence 45999999999999999999984 468899999997654322 2234678899999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+....
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC---
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccC
Confidence 9999999999999999999999999999999999999999999999999999999999 7788999999999987644
Q ss_pred CCce--eeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 285 GLTF--RVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 285 ~~~~--~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... +.+++..| +|. -++.++++.+++.|..+|.+
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence 3322 12333333 222 13446677777777777654
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-41 Score=320.71 Aligned_cols=233 Identities=18% Similarity=0.238 Sum_probs=178.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----AVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~ 205 (489)
|++.++||+|+||+||+|+++.+++.||+|++..... .....+.+.+|+++|++| +|||||+++++|.+ ...+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEE
Confidence 4778899999999999999999999999999986554 455678899999999999 89999999999975 35689
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||||+||+|.+++.+.+.+++..++.++.||+.||+|||++| ||||||||+||||. +.++.+||+|||+|+...
T Consensus 106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCCEeCC
Confidence 99999999999999999899999999999999999999999999 99999999999993 236789999999998765
Q ss_pred CCCceeeeeeccC--------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcc-hhhhhhccHHHHHHH
Q 040003 284 PGLTFRVWLRLHF--------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGD-RVIAESLSEEEIAGL 348 (489)
Q Consensus 284 ~~~~~~~~~~~~y--------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~l 348 (489)
.....+.+++..| +|. -++.++++.+++.|..+|......... .+..... .......+++-.+.+
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li 263 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHH
Confidence 5544443444444 222 235588999999999988653221100 0000000 111222333322333
Q ss_pred HHHHhhhcCCCCCCccHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~ 369 (489)
. +++..|++.|++.+|+.
T Consensus 264 ~---~~L~~dP~~R~s~~e~l 281 (290)
T 3fpq_A 264 E---GCIRQNKDERYSIKDLL 281 (290)
T ss_dssp H---HHSCSSGGGSCCHHHHH
T ss_pred H---HHccCChhHCcCHHHHh
Confidence 3 56788888889888864
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=316.30 Aligned_cols=238 Identities=19% Similarity=0.225 Sum_probs=175.7
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.++||+|+||+||+|++. .++..||||+++. ......+.|.+|+++|++| +|||||++++++.+.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~---~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS---CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC---CChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCC
Confidence 46999999999999999999875 3578899999964 3456678899999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRG-------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~ 269 (489)
.+|||||||+||+|.++|...+ .+++..+..++.||+.||.|||+++||||||||+|||| +.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCCC
Confidence 9999999999999999997643 58999999999999999999999999999999999999 7778
Q ss_pred CeEEEeeccccccCCCCceee----eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCCC-CCCC
Q 040003 270 PLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPP 330 (489)
Q Consensus 270 ~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~ 330 (489)
.+||+|||+|+.......... .++..| +|.. ++.+.++.+++. |+.+|......... .+..
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~ 245 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999999999987755433222 222233 2222 344677777775 77776543210000 0000
Q ss_pred CcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 331 IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-.....+..++.+-.+.+ -+++..|++.|++..|+..+|+.+
T Consensus 246 ~~~~~~p~~~~~~~~~li---~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 246 GRVLQRPRTCPQEVYELM---LGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp TCCCCCCTTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCccchHHHHHHH---HHHcCCChhHCcCHHHHHHHHHHH
Confidence 000011123333333333 367889999999999998877654
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=326.73 Aligned_cols=189 Identities=23% Similarity=0.308 Sum_probs=155.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----- 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 200 (489)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+.. ......+.+.+|+++|++| +|||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTT
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccc
Confidence 3457999999999999999999999999999999997543 3455667889999999999 89999999998754
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.+.+|||||||. |+|.+++...+.+++..++.+++||+.||+|||++|||||||||+|||+ +.++.+||+|||+|
T Consensus 130 ~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGla 205 (398)
T 4b99_A 130 EFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMA 205 (398)
T ss_dssp TCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeeccee
Confidence 467999999995 6899999888899999999999999999999999999999999999999 77889999999999
Q ss_pred cccCCCCc------eeeeeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLT------FRVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~------~~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.+..... .+.+.+..| .-+.++.++++.+++.|..+|++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 87643211 111233333 112345678888888888887654
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=312.44 Aligned_cols=239 Identities=18% Similarity=0.218 Sum_probs=170.5
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+.++||+|+||+||+|+++ .+++.||||+++. ......+.|.+|+++|++| +|||||+++++|.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~---~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTML-QHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC---CSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc---CCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECC
Confidence 45888999999999999999875 3688999999964 3456678899999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQR---------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
.+|||||||++|+|.+++... +.+++..+..++.||+.||.|||+++||||||||+|||| +.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl---~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE---CC
Confidence 999999999999999998653 358899999999999999999999999999999999999 67
Q ss_pred CCCeEEEeeccccccCCCCceee----eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||+|+.+........ .++..| +|.. ++.+.++.+++. |+.+|......... .+
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i 273 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 78999999999997654432211 222222 2222 344677778776 77776543211000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
..-.....+..++++-.+.+ -+++..|++.|.++.|+...|+.+.
T Consensus 274 ~~g~~~~~p~~~~~~~~~li---~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 274 TQGRELERPRACPPEVYAIM---RGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHTCCCCCCTTCCHHHHHHH---HHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HcCCCCCCcccccHHHHHHH---HHHcCcChhHCcCHHHHHHHHHHHh
Confidence 00000011223333333333 3678999999999999988887763
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=307.77 Aligned_cols=239 Identities=16% Similarity=0.222 Sum_probs=175.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.++++++||+|+||+||+|++. ..||||+++... ......+.|.+|+.+|++| +|||||++++++.+ +.+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-CeEEEE
Confidence 45888999999999999999854 369999986543 3566778999999999999 89999999998764 578999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+||+|.++|... +.+++..+..++.||+.||+|||+++||||||||+|||| +.++.+||+|||+|+......
T Consensus 110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE---ETTEEEEECCCSSCBC-----
T ss_pred EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE---CCCCcEEEeeccCceecccCC
Confidence 9999999999999754 579999999999999999999999999999999999999 677889999999998765322
Q ss_pred cee----eeeeccC------------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CC----CCCcchhhhhhc
Q 040003 287 TFR----VWLRLHF------------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AV----PPIGDRVIAESL 340 (489)
Q Consensus 287 ~~~----~~~~~~y------------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~ 340 (489)
... ..++..| +|. -++.+.++.+++.|+.+|....-.... .+ .......+....
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 266 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence 211 1222233 333 235588999999999988653211000 00 000001112223
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN 378 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~ 378 (489)
+.+-.+.+ -+++..|++.|.++.|+...|..+...
T Consensus 267 ~~~l~~li---~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 267 PKAMKRLV---ADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CHHHHHHH---HHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hHHHHHHH---HHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 33322222 367899999999999998888766443
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=309.34 Aligned_cols=239 Identities=19% Similarity=0.230 Sum_probs=173.9
Q ss_pred ceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+++.++||+|+||+||+|+.. .+++.||||+++... .....+.|.+|+.+|++| +|||||+++|++.+...
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSS
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCE
Confidence 4788999999999999999864 467899999996532 234457899999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 204 VHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
+|||||||++|+|.++|..+ +.+++..+..++.||+.||+|||+++||||||||+|||| +.
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl---~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV---YD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE---CC
Confidence 99999999999999999653 358899999999999999999999999999999999999 77
Q ss_pred CCCeEEEeeccccccCCCCceee----eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCCC-CC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDKV-AV 328 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~ 328 (489)
++.+||+|||+|+.......... .++..| +|.. ++.+.++.+++. |..+|.+....+.. .+
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i 260 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 78999999999987654322111 222222 2221 244677777775 66666543210000 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
..-...-.+...+.+ +..+ +-+++..|++.|.++.|+...|++.+
T Consensus 261 ~~~~~~~~p~~~~~~-~~~l--i~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RNRQVLPCPDDCPAW-VYAL--MIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HTTCCCCCCTTCCHH-HHHH--HHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HcCCCCCCcccchHH-HHHH--HHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 000000011223332 2222 33688999999999999999888764
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-38 Score=328.99 Aligned_cols=239 Identities=26% Similarity=0.379 Sum_probs=178.8
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.+.++|++++.||+|+||+||+|+++.+|+.||+|++.+. .....+.+.+|+.+|+.| +|||||+++++|.+...
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~ 228 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNE 228 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSE
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc---chhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence 34457899999999999999999999999999999999753 345567889999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|||||||.||+|+++|.. .+.+++..++.+++||+.||+|||++|||||||||+|||+.. +..+.+||+|||+|+.+
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~-~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCSSCEEC
T ss_pred EEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC-CCCCCEEEeeccceeEc
Confidence 9999999999999999864 468999999999999999999999999999999999999953 23578999999999998
Q ss_pred CCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhccHHH
Q 040003 283 RPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 344 (489)
.+...... +++..| +|. .++.++++.+++.|..+|.+....... .+ ...........++.+-
T Consensus 308 ~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 387 (573)
T 3uto_A 308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 387 (573)
T ss_dssp CTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred cCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence 76655433 222222 111 123456666666666665433210000 00 0000001112345444
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+.++ +++..|+..|++..|+..
T Consensus 388 ~dli~---~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 388 KDFIR---KLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHHHH---HHccCChhHCcCHHHHhc
Confidence 44444 568889999999988754
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=337.88 Aligned_cols=236 Identities=20% Similarity=0.262 Sum_probs=180.9
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHH---HHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRR---EIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~---E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.|+++++||+|+||+||+|+++.+|+.||||++.+..+........+.+ ++.+++.+ +|||||+++++|.+.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCE
Confidence 356999999999999999999999999999999998654322222233344 45566666 79999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|||||||.||+|.++|.+.+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+.
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999 788999999999999887
Q ss_pred CCCceeeeeeccC----------CC----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCC---cchhhhhhccHHHHH
Q 040003 284 PGLTFRVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPI---GDRVIAESLSEEEIA 346 (489)
Q Consensus 284 ~~~~~~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 346 (489)
.....+.+++..| +| +-++.++++.+++.|..+|.+....+...+... ........++.+-.+
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~d 423 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHH
Confidence 6655554444333 12 124568999999999999975432221100000 001122345665555
Q ss_pred HHHHHHhhhcCCCCCCcc-----HHHHH
Q 040003 347 GLKEMFKMIDTDNSGYIT-----LEELK 369 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~-----~~el~ 369 (489)
.+. .++..|+..|++ .+|++
T Consensus 424 LI~---~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 424 LLE---GLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp HHH---HHTCSCGGGCTTCSSSTHHHHT
T ss_pred HHH---HHccCCHhHCCCCCCCCHHHHh
Confidence 554 557788888887 56654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=308.00 Aligned_cols=153 Identities=29% Similarity=0.425 Sum_probs=129.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
.+.|++++.||+|+||+||+|+++.+|+.||||++.... .....+.+.+|+++|++| +|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~ 80 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEK 80 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCcccc
Confidence 345999999999999999999999999999999997542 455667899999999999 8999999999997644
Q ss_pred --------eEEEEEeecCCCchHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 203 --------AVHVVMELCAGGELFDRIIQRGHY---TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 203 --------~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
.+|||||||.||+|.+++..++.+ .+..++.++.||+.||+|||++|||||||||+|||| +.++.+
T Consensus 81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl---~~~~~v 157 (299)
T 4g31_A 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVV 157 (299)
T ss_dssp ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCE
T ss_pred ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE---CCCCcE
Confidence 479999999999999999876554 445688899999999999999999999999999999 777899
Q ss_pred EEEeeccccccCCC
Q 040003 272 KTIDFGLSMFFRPG 285 (489)
Q Consensus 272 kl~DFGla~~~~~~ 285 (489)
||+|||+|+.+...
T Consensus 158 Kl~DFGla~~~~~~ 171 (299)
T 4g31_A 158 KVGDFGLVTAMDQD 171 (299)
T ss_dssp EECCCCCC------
T ss_pred EEccCccceecCCC
Confidence 99999999987654
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-38 Score=308.85 Aligned_cols=240 Identities=20% Similarity=0.268 Sum_probs=178.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 201 (489)
+.|+++++||+|+||+||+|.+..++ +.||||.+... ......+.+.+|+++|+++.+|||||+++++|.+ .
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~--~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc--cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 56999999999999999999987543 67999998653 3455667899999999999656999999999866 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC
Q 040003 202 VAVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~ 265 (489)
..+|||||||++|+|.++|... ..+++..+..++.||+.||+|||+++||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl--- 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--- 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee---
Confidence 6789999999999999999753 237899999999999999999999999999999999999
Q ss_pred CCCCCeEEEeeccccccCCCCceee----eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCCC-
Q 040003 266 QEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDKV- 326 (489)
Q Consensus 266 ~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~~- 326 (489)
+.++.+||+|||+|+.+.....+.. .++..| +|.. ++.+.++.+++. |..+|++.......
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~ 298 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 298 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 6778999999999998765443322 223233 2322 355788899986 88888753221100
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+..-.....+...+++-.+.+ -+++..|++.|++..|+...|..+
T Consensus 299 ~~i~~g~~~~~p~~~~~~~~~li---~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 299 RRLKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCccCCHHHHHHH---HHHcCcChhHCcCHHHHHHHHHHH
Confidence 0000000111223343333333 367889999999999988776554
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=302.43 Aligned_cols=150 Identities=19% Similarity=0.397 Sum_probs=132.4
Q ss_pred CcccceeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.+.|+++++||+|+||+||+|+++ .+++.||+|++.+.. ...++.+|+++|+.+.+|||||+++++|.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 34567999999999999999999875 467899999986532 2356789999999997799999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+++|||||||+||+|.+++ +.+++.+++.+++||+.||+|||++|||||||||+|||+.. ..+.+||+|||+|+.
T Consensus 93 ~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~--~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR--RLKKYALVDFGLAQG 167 (361)
T ss_dssp TEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCEE
T ss_pred CEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC--CCCeEEECcCCCCcc
Confidence 9999999999999999987 36999999999999999999999999999999999999942 236899999999986
Q ss_pred cCC
Q 040003 282 FRP 284 (489)
Q Consensus 282 ~~~ 284 (489)
...
T Consensus 168 ~~~ 170 (361)
T 4f9c_A 168 THD 170 (361)
T ss_dssp CTT
T ss_pred cCC
Confidence 643
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=287.31 Aligned_cols=237 Identities=19% Similarity=0.124 Sum_probs=168.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----e
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV----A 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----~ 203 (489)
+.|.+.++||+|+||+||+|++ +|+.||||++.... .......+|+..+.+| +|||||++++++.+.+ .
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~ 75 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceE
Confidence 4589999999999999999987 58899999986432 1112233566666778 8999999999997654 6
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL--------GVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
+|||||||+||+|.+++.. ..+++..+..++.|++.||.|||++ +||||||||+|||| +.++.+||+|
T Consensus 76 ~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~D 151 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEECC
T ss_pred EEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEEEe
Confidence 8999999999999999865 4689999999999999999999987 99999999999999 7789999999
Q ss_pred eccccccCCCCcee------eeeeccC---------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC---C
Q 040003 276 FGLSMFFRPGLTFR------VWLRLHF---------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV---A 327 (489)
Q Consensus 276 FGla~~~~~~~~~~------~~~~~~y---------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~ 327 (489)
||+|+......... .+++..| ++ +-++.+.++.+++.|...+........+ .
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~ 231 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhc
Confidence 99999876543321 1333334 11 2235578899999887655432111100 0
Q ss_pred C--------------CCCcchhhhhhc-cHHHHHHHHH-HHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 328 V--------------PPIGDRVIAESL-SEEEIAGLKE-MFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 328 ~--------------~~~~~~~~~~~~-~~~~~~~l~~-~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. .......++... +.+....+.+ +-+++..|++.|+++.|+...|.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 0 000001111111 1122233333 3467889999999999998888665
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=293.80 Aligned_cols=226 Identities=30% Similarity=0.483 Sum_probs=181.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++++.||+|+||+||+|.++.+++.||+|++..... .....+.+.+|+.+|+.| +|||||++++++.+.+..
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEE
Confidence 355679999999999999999999999999999999986543 344567889999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+.....++.+||+|||+|+.+..
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999999999989999999999999999999999999999999999999996554678899999999987654
Q ss_pred CCcee--e--------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCCCC
Q 040003 285 GLTFR--V--------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPP 330 (489)
Q Consensus 285 ~~~~~--~--------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 330 (489)
..... . ++++..||++.+...++..+..+.+.++...|+.
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~------ 239 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT------ 239 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTT------
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcccccc------
Confidence 32211 0 2333346666666666666666666666555532
Q ss_pred CcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 331 IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
++.+-.+.+. +++..|+..|++..|+..
T Consensus 240 ---------~s~~~~~li~---~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 240 ---------VTPEAKDLIN---KMLTINPSKRITAAEALK 267 (444)
T ss_dssp ---------SCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred ---------CCHHHHHHHH---HHcCCChhHCCCHHHHhc
Confidence 3333333333 568899999999998753
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=293.26 Aligned_cols=235 Identities=25% Similarity=0.367 Sum_probs=169.8
Q ss_pred Ccccceeec-ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe---
Q 040003 125 NLKEMYSLG-RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--- 200 (489)
Q Consensus 125 ~~~~~y~~~-~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--- 200 (489)
.+.+.|.+. +.||+|+||+||+|+++.+++.||||++... ..+.+|+.++.++.+||||++++++|..
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~ 129 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA 129 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence 344568776 7899999999999999999999999998632 4567899998777689999999999876
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
...+|||||||.||+|.+++...+ .+++..+..++.||+.||.|||++|||||||||+|||+...+.++.+||+|||
T Consensus 130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 667999999999999999997653 59999999999999999999999999999999999999554447889999999
Q ss_pred cccccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC------CCCc-chh
Q 040003 278 LSMFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV------PPIG-DRV 335 (489)
Q Consensus 278 la~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~------~~~~-~~~ 335 (489)
+|+.......... ..+..| .+. .++.+.++.+++.|..+|......... .. .... ...
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 210 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp TCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT
T ss_pred cccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc
Confidence 9987654332221 222222 121 235578899999998888654321100 00 0000 000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
....++.+-.+.++ .++..|+..|++..|+..
T Consensus 290 ~~~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 290 EWSEVSEEVKMLIR---NLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TTTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred ccccCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 00123443333333 677888889999988864
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=281.43 Aligned_cols=235 Identities=28% Similarity=0.385 Sum_probs=178.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++++.||+|+||.||+|++..+|+.||||++.+... .....+.+.+|+++|+.+ +||||+++++++.+...+|+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEE
Confidence 3569999999999999999999999999999999976543 455677899999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+..+.
T Consensus 92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSSC
T ss_pred EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCCCC
Confidence 99999999999999988999999999999999999999999999999999999999 778899999999998776543
Q ss_pred ceee-eeeccC---------CCC-----cchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHH
Q 040003 287 TFRV-WLRLHF---------LFF-----QKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 287 ~~~~-~~~~~y---------pf~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
.... ..+..| ++. -++.+.++.+++.|..+|.+................++..++.+-.+.++
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~-- 246 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK-- 246 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH--
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH--
Confidence 3221 122222 121 23457788888888887765432110000000000011123333333333
Q ss_pred HhhhcCCCCCCccHHHHH
Q 040003 352 FKMIDTDNSGYITLEELK 369 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~ 369 (489)
+++..|+..|++.+|+.
T Consensus 247 -~~L~~dP~~R~t~~eil 263 (328)
T 3fe3_A 247 -RFLVLNPIKRGTLEQIM 263 (328)
T ss_dssp -HHCCSSTTTSCCHHHHT
T ss_pred -HHCCCChhHCcCHHHHh
Confidence 45677777788777753
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=288.52 Aligned_cols=242 Identities=27% Similarity=0.411 Sum_probs=175.0
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---EDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
..+.+.|++++.||+|+||+||+|+++.+|+.||+|++.+...... ...+.+.+|+.+|+.+ +||||++++++|.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYEN 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEEC
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEe
Confidence 4566789999999999999999999999999999999987543221 2356789999999999 79999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-CCCeEEEeeccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-EAPLKTIDFGLS 279 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-~~~~kl~DFGla 279 (489)
...+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+. ...+||+|||++
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999999988888999999999999999999999999999999999999943221 127999999999
Q ss_pred cccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhcc
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLS 341 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~ 341 (489)
+.+..+..... ..+..| ++. .++.+.++.+++.|..+|....-.... .+ ...........++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 246 (361)
T 2yab_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246 (361)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence 88765433221 112222 111 123355556666665555432100000 00 0000000112233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.+-.+.+. +++..|+..|++..|+.
T Consensus 247 ~~~~~li~---~~L~~dP~~R~t~~e~l 271 (361)
T 2yab_A 247 ELAKDFIR---KLLVKETRKRLTIQEAL 271 (361)
T ss_dssp HHHHHHHH---HHSCSSTTTSCCHHHHH
T ss_pred HHHHHHHH---HHCCCChhHCcCHHHHh
Confidence 33333333 56788999999998864
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=286.13 Aligned_cols=160 Identities=35% Similarity=0.641 Sum_probs=144.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++.+.||+|+||.||+|.++.+++.||+|++..... .....+.+.+|+.+|+.| +|||||++++++.+....
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~ 103 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFH 103 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEE
Confidence 445679999999999999999999999999999999976543 455677899999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++..+..
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999999999999998888899999999999999999999999999999999999996555556799999999987764
Q ss_pred CC
Q 040003 285 GL 286 (489)
Q Consensus 285 ~~ 286 (489)
..
T Consensus 184 ~~ 185 (362)
T 2bdw_A 184 SE 185 (362)
T ss_dssp CC
T ss_pred Cc
Confidence 43
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=286.61 Aligned_cols=153 Identities=29% Similarity=0.430 Sum_probs=140.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+.+|+.+.+||||++++++|.+...+|+|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997654333445677889999999986799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||.||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+...
T Consensus 103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecc
Confidence 9999999999999988899999999999999999999999999999999999999 778899999999998643
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=280.81 Aligned_cols=234 Identities=24% Similarity=0.276 Sum_probs=174.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+|+.+ +||||+++++++.+...+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEE
Confidence 4599999999999999999999999999999999764322233456788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC-
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL- 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~- 286 (489)
||||.||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCCC
Confidence 9999999999999888899999999999999999999999999999999999999 778899999999998643222
Q ss_pred c-eeeeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 287 T-FRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 287 ~-~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
. .....+..| ++ +-++.+.++.+++.|..+|......... .+.. ........++.+-...+.
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~-- 237 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-EEIRFPRTLSPEAKSLLA-- 237 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-CCCCCCTTSCHHHHHHHH--
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCHHHHHHHH--
Confidence 1 111222222 11 1234577888888888777543210000 0000 000011234444444444
Q ss_pred HhhhcCCCCCCc-----cHHHHH
Q 040003 352 FKMIDTDNSGYI-----TLEELK 369 (489)
Q Consensus 352 F~~~D~d~~g~i-----~~~el~ 369 (489)
+++..|+..|+ +.+|+.
T Consensus 238 -~lL~~dP~~R~g~~~~~~~ei~ 259 (337)
T 1o6l_A 238 -GLLKKDPKQRLGGGPSDAKEVM 259 (337)
T ss_dssp -HHTCSSTTTSTTCSTTTHHHHH
T ss_pred -HHhhcCHHHhcCCCCCCHHHHH
Confidence 45677888887 677764
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=277.79 Aligned_cols=236 Identities=21% Similarity=0.365 Sum_probs=173.0
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|++++.||+|+||+||+|.+..+++.||+|++... ......+.+|+.+|+.+ +||||+++++++.+...+|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~ 77 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIA-RHRNILHLHESFESMEELV 77 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEE
Confidence 456799999999999999999999999999999998643 24456788999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||||+||+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+... .++.+||+|||+++.+..
T Consensus 78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeECCC
Confidence 9999999999999987653 69999999999999999999999999999999999999431 268899999999998876
Q ss_pred CCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~ 346 (489)
+..... ..+..| ++ +-++.+.++.+++.|..+|......... .+ ...........++.+-.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence 554332 112222 00 1123355666666666655432110000 00 000000001123333333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+. .++..|+..|++..|+..
T Consensus 237 li~---~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 237 FVD---RLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHH---HHcCCChhHCcCHHHHhc
Confidence 333 678889999999988754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=279.15 Aligned_cols=234 Identities=25% Similarity=0.314 Sum_probs=170.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++++.||+|+||+||+|++..+++.||+|++....... +.+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSL-RHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----HHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----HHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEE
Confidence 46999999999999999999999999999999997643322 5678999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.+|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||+|+.......
T Consensus 95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~-~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECS-SSSCCEEECCCCCC--------
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-CCCceEEEeecCccccccccCC
Confidence 999999999999988889999999999999999999999999999999999999943 2234599999999985433222
Q ss_pred e-eeeeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCC--CC----CCCcchhhhhhccHHHHH
Q 040003 288 F-RVWLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AV----PPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 288 ~-~~~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~ 346 (489)
. ..+.+..| .+ +-++.++++.+++.|..+|....-.... .+ ......-....++.+-.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 1 11222223 22 2235578899999999888753221110 00 000000000123444333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+. +++..|+..|++..|+..
T Consensus 254 li~---~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 254 LIS---RIFVADPATRISIPEIKT 274 (361)
T ss_dssp HHH---HHSCSCTTTSCCHHHHHT
T ss_pred HHH---HHccCChhHCcCHHHHHh
Confidence 443 567889999999999864
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=281.64 Aligned_cols=235 Identities=29% Similarity=0.431 Sum_probs=183.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|.+.+.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.+ +||||+++++++.+...+|+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEE
Confidence 35699999999999999999999999999999999754322222235788999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+ +|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.....+.
T Consensus 87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccCCc
Confidence 99999 78999999888899999999999999999999999999999999999999 777899999999998876544
Q ss_pred ceee-eeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHH
Q 040003 287 TFRV-WLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 287 ~~~~-~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
.... ..+..| ++ +-++.+.++.+++.|..+|.....+............+...++.+-.+.++
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~-- 240 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIR-- 240 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHH--
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHH--
Confidence 3221 122222 11 123557899999999999987655432211111112233345554444444
Q ss_pred HhhhcCCCCCCccHHHHH
Q 040003 352 FKMIDTDNSGYITLEELK 369 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~ 369 (489)
+++..|+..|++.+|+.
T Consensus 241 -~~L~~dP~~Rpt~~eil 257 (336)
T 3h4j_B 241 -RMIVADPMQRITIQEIR 257 (336)
T ss_dssp -TTSCSSGGGSCCHHHHT
T ss_pred -HHcCCChhHCcCHHHHH
Confidence 67788888999988875
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=283.63 Aligned_cols=232 Identities=19% Similarity=0.254 Sum_probs=176.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+++++||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+|.++.+|||||+++++|.+...+|+|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 45999999999999999999999999999999998876666666677889999999887899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC-CC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP-GL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~-~~ 286 (489)
||||.||+|..++...+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.... +.
T Consensus 132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 7788999999999986432 22
Q ss_pred c-eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCCCCC---C------cchhhhhhccHH
Q 040003 287 T-FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVAVPP---I------GDRVIAESLSEE 343 (489)
Q Consensus 287 ~-~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~ 343 (489)
. .....+..| ++. -++.+.++.+++.|..+|......+...... . ....++..++.+
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~ 288 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK 288 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHH
Confidence 2 111233333 111 2355889999999999986432211110000 0 000112234544
Q ss_pred HHHHHHHHHhhhcCCCCCCccH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITL 365 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~ 365 (489)
-...++ +++..|+..|++.
T Consensus 289 ~~~li~---~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 289 AASVLK---SFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHH---HHTCSCTTTSTTC
T ss_pred HHHHHH---HHhcCCHhHcCCC
Confidence 444444 4577888888875
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=272.07 Aligned_cols=243 Identities=22% Similarity=0.310 Sum_probs=184.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.++|++++.||+|+||.||+|++..+++.||+|++...........+.+.+|+.+++++ +||||+++++++.+.+.+|
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~ 87 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYY 87 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEE
Confidence 456799999999999999999999999999999999776666677788999999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+|||||+|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC---
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCccccccc
Confidence 999999999999999888899999999999999999999999999999999999999 67789999999999876543
Q ss_pred Cceee---eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CCCCCc---chhhhhhccHHH
Q 040003 286 LTFRV---WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIG---DRVIAESLSEEE 344 (489)
Q Consensus 286 ~~~~~---~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~ 344 (489)
..... ..+..| ++ +-++.+.++.+++.|..+|......... .+.... .......++..-
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHH
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHH
Confidence 22111 222223 11 1235578889999998888654321000 000000 001112233332
Q ss_pred HHHHHHHHhhhcCCCCCCc-cHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYI-TLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i-~~~el~~~l~~l 375 (489)
...+ -+++..|+..|. +.++|...|..+
T Consensus 245 ~~li---~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 245 SNVI---LRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHH---HHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHH---HHHhcCCHhHccccHHHHHHHHHHH
Confidence 2222 256788888887 888888888765
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=275.81 Aligned_cols=187 Identities=22% Similarity=0.359 Sum_probs=155.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+|+.||+|++.+.........+.+.+|+.+|+.+ +||||+++++++.+...+|+|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEE
Confidence 4599999999999999999999999999999999764322223456788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+......
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~~~- 160 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVT- 160 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSCB-
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCCcc-
Confidence 9999999999999988899999999999999999999999999999999999999 778899999999998764322
Q ss_pred eeeeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| ++ +-++.+.++.+++.|..+|..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 111222222 11 113446777777777776653
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=272.84 Aligned_cols=189 Identities=20% Similarity=0.270 Sum_probs=162.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|+.+|+++.+||||++++++|.+...+|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999998877777777888999999999986799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC-
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL- 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~- 286 (489)
||||.||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+......
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCCC
Confidence 9999999999999888899999999999999999999999999999999999999 778899999999998643221
Q ss_pred c-eeeeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 287 T-FRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~-~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. .....+..| ++ +-++.++++.+++.|..+|..
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 1 111222223 11 123558899999999988864
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=278.96 Aligned_cols=187 Identities=24% Similarity=0.362 Sum_probs=155.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|+.+|+.+ +||||+++++++.+...+|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 5699999999999999999999999999999999764332233456788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|+.+....
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~~~- 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT- 195 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSCB-
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccCCc-
Confidence 9999999999999988899999999999999999999999999999999999999 778899999999998775432
Q ss_pred eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| ++. -++.+.++.+++.|..+|..
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 240 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence 122222222 111 12346677777777666643
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=279.80 Aligned_cols=189 Identities=25% Similarity=0.321 Sum_probs=155.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|..+|..+.+||||+++++++.+...+|+|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 45999999999999999999999999999999997643222234567889999999876899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+....+..
T Consensus 97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccCCC
Confidence 9999999999999888899999999999999999999999999999999999999 7788999999999986543222
Q ss_pred e--eeeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 288 F--RVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~--~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
. ....+..| ++ +-++.+.++.+++.|..+|..
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence 1 11222222 11 112446777777777777654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=278.91 Aligned_cols=189 Identities=24% Similarity=0.264 Sum_probs=154.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|..+|..+.+||||+++++++.+...+|+|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 45999999999999999999999999999999997653322334567889999998886799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.......
T Consensus 100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccCCc
Confidence 9999999999999888899999999999999999999999999999999999999 7788999999999986432211
Q ss_pred --eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 --FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 --~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
.....+..| ++. -++.+.++.+++.|..+|..
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 111222222 111 12346677777777766654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-33 Score=273.88 Aligned_cols=155 Identities=35% Similarity=0.616 Sum_probs=137.2
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
..+.+.|++++.||+|+||+||+|+++.+++.||||++.+.... ..+|+++|.++.+||||+++++++.+...
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 90 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKY 90 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence 34567799999999999999999999999999999999765422 34688899988779999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla~~~ 282 (489)
+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+.+.+ ..+.+||+|||+++.+
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999999998888899999999999999999999999999999999999985432 2245999999999877
Q ss_pred CCC
Q 040003 283 RPG 285 (489)
Q Consensus 283 ~~~ 285 (489)
...
T Consensus 171 ~~~ 173 (342)
T 2qr7_A 171 RAE 173 (342)
T ss_dssp BCT
T ss_pred cCC
Confidence 543
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=279.81 Aligned_cols=188 Identities=22% Similarity=0.300 Sum_probs=145.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHH-HHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIM-HHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l-~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+.|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|..++ +.+ +||||++++++|.+...+|+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEEEE
Confidence 4599999999999999999999999999999999877665555566777888874 556 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||.||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+......
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccccccCC
Confidence 99999999999999888899999999999999999999999999999999999999 778899999999998643222
Q ss_pred c--eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 287 T--FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~--~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
. .....+..| ++. -++.+.++.+++.|..+|..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 241 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 1 111222222 111 12446777788877777653
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=273.92 Aligned_cols=243 Identities=29% Similarity=0.420 Sum_probs=178.3
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---EDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
..+.+.|++.+.||+|+||.||+|++..+++.||+|++.+...... ...+.+.+|+.+|+.+ +||||+++++++.+
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN 85 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEe
Confidence 3456779999999999999999999999999999999976543221 2357789999999999 79999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeeccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLS 279 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla 279 (489)
...+|+|||||.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+ ....+||+|||++
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999999998888899999999999999999999999999999999999994322 1237999999999
Q ss_pred cccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC----CCCCCcchhhhhhcc
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV----AVPPIGDRVIAESLS 341 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 341 (489)
+.+..+..... ..+..| ++. .++.+.++.+++.|..+|......... ..............+
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCC
Confidence 88754433221 222222 121 134477888888888777543211000 000000001111233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+-.+.++ .++..|+..|++..|+..
T Consensus 246 ~~~~~li~---~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 246 ALAKDFIR---RLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 33333333 567888888999888643
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=284.24 Aligned_cols=187 Identities=28% Similarity=0.345 Sum_probs=152.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+++++||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+|+.+ +|||||+++++|.+...+|||
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEE
Confidence 5699999999999999999999999999999999753221112224578899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++.. ..+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.....
T Consensus 148 ~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp ECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTSE
T ss_pred EeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccCCc
Confidence 999999999998865 579999999999999999999999999999999999999 7788999999999987754432
Q ss_pred ee---eeeeccC-----------------CCCcchhHHHHHHHhcccccCCC
Q 040003 288 FR---VWLRLHF-----------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~---~~~~~~y-----------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.. .+.+..| .-+-++.+.++.+++.|..+|..
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 11 1222222 01123446777788888777754
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=261.03 Aligned_cols=160 Identities=35% Similarity=0.641 Sum_probs=144.6
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++++ +||||+++++++.+....
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFH 80 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEE
Confidence 355779999999999999999999999999999999976543 455677899999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||||.+++|.+.+...+.+++..+..++.|++.||.|||++||+||||||+|||+..++..+.+||+|||++.....
T Consensus 81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999999999999998888999999999999999999999999999999999999996555556699999999987654
Q ss_pred CC
Q 040003 285 GL 286 (489)
Q Consensus 285 ~~ 286 (489)
..
T Consensus 161 ~~ 162 (284)
T 3kk8_A 161 SE 162 (284)
T ss_dssp SC
T ss_pred Cc
Confidence 43
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=281.66 Aligned_cols=235 Identities=20% Similarity=0.304 Sum_probs=180.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+++|+.+ +|||||+++++|.+...+|+|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEE
Confidence 5699999999999999999999999999999999765433334457788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+.....
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTCC
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCCCc
Confidence 9999999999999888899999999999999999999999999999999999999 7788999999999988754433
Q ss_pred eee-eeeccC--------------C--CCcchhHHHHHHHhcccccCCCCCCCCCCCC-CC--CcchhhhhhccHHHHHH
Q 040003 288 FRV-WLRLHF--------------L--FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAV-PP--IGDRVIAESLSEEEIAG 347 (489)
Q Consensus 288 ~~~-~~~~~y--------------p--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 347 (489)
... ..+..| . -+.++.++++.+++.|..+|..........+ .. .........++.+-...
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~l 250 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSL 250 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHH
Confidence 222 222222 1 1224568899999999998865432211000 00 00001112334444444
Q ss_pred HHHHHhhhcCCCCCCcc-HHHHH
Q 040003 348 LKEMFKMIDTDNSGYIT-LEELK 369 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~-~~el~ 369 (489)
+. +++..|+..|++ .+++.
T Consensus 251 i~---~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 251 LK---KLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp HH---HHSCSSGGGSCCSHHHHH
T ss_pred HH---HHhcCCHhHhcccHHHHH
Confidence 44 567888888887 66654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=286.36 Aligned_cols=189 Identities=20% Similarity=0.261 Sum_probs=154.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|+++++||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+|..+ +||||++++++|.+...+||
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEE
Confidence 35699999999999999999999999999999999753221112233478999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||.||+|.+++.. .+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+...
T Consensus 152 V~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhcccC
Confidence 9999999999999987 4789999999999999999999999999999999999999 77889999999999876544
Q ss_pred Cceee---eeeccC------------------CCCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV---WLRLHF------------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~---~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... +.+..| .-+-++.+.++.+++.|..+|..
T Consensus 229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 33211 122222 11123446777788888777754
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=277.14 Aligned_cols=242 Identities=24% Similarity=0.344 Sum_probs=175.1
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+.|++.+.||+|+||+||+|+++.+++.||||++...... .....+.+.+|+.+|+.+ +||||+++++++.+.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDG 99 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCC
Confidence 3456799999999999999999999999999999999653211 111346789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 203 AVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
.+|+|||||+|++|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+...+....+||+|||+
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999998888653 2489999999999999999999999999999999999996555556699999999
Q ss_pred ccccCCCCcee--eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCCC--CC-Ccchhhhhhc
Q 040003 279 SMFFRPGLTFR--VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVAV--PP-IGDRVIAESL 340 (489)
Q Consensus 279 a~~~~~~~~~~--~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 340 (489)
++.+....... .+.+..| ++. .++.+.++.+++.|..+|..........+ .. .........+
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTS
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccC
Confidence 98876543211 1222222 121 23447788888888777754210000000 00 0000001123
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+-.+.++ +++..|++.|++..|+..
T Consensus 260 s~~~~~li~---~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 260 SESAKDLVR---RMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 333333333 567888888999888753
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=275.02 Aligned_cols=240 Identities=27% Similarity=0.373 Sum_probs=175.1
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+.+.|++++.||+|+||+||+|.+..+++.||+|++... .......+.+|+.+|+.| +||||+++++++.+..
T Consensus 46 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~ 121 (387)
T 1kob_A 46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKY 121 (387)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSS
T ss_pred CCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc---chhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCC
Confidence 344567799999999999999999999999999999998653 234556789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
.+|+|||||.||+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||+|+.
T Consensus 122 ~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 122 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATK 200 (387)
T ss_dssp EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEeccccee
Confidence 9999999999999999886553 6999999999999999999999999999999999999943 2356799999999998
Q ss_pred cCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhccHH
Q 040003 282 FRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLSEE 343 (489)
Q Consensus 282 ~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~ 343 (489)
+........ ..+..| ++. .++.+.++.+++.|..+|......... .+ ...........++.+
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 280 (387)
T 1kob_A 201 LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE 280 (387)
T ss_dssp CCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHH
T ss_pred cCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHH
Confidence 765443222 122222 111 123356666666666666432110000 00 000000001123433
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
-.+.+. .++..|+..|++..|+..
T Consensus 281 ~~~li~---~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 281 AKDFIK---NLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred HHHHHH---HHcCCChhHCcCHHHHhh
Confidence 333333 678889999999988754
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=267.06 Aligned_cols=237 Identities=21% Similarity=0.245 Sum_probs=179.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.++++||+|+||+||+|.+..+++.||+|++.. ......+.+.+|+++|+++ +||||+++++++.+....|+|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~---~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC---CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc---CCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEE
Confidence 459999999999999999999999999999998853 3466778899999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.+|+|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC---
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceeccccc
Confidence 999999999999987 4679999999999999999999999999999999999999 778889999999998775433
Q ss_pred cee----------------eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchh--
Q 040003 287 TFR----------------VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRV-- 335 (489)
Q Consensus 287 ~~~----------------~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-- 335 (489)
... .+.+..| ++. -.+.+.++.+++.|...++....... .........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~-~~~~~~~~~~~ 241 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM-DFGLNVRGFLD 241 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT-TSSBCHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH-HHhhhhhcccc
Confidence 211 1122222 222 12457788889888777664322111 111111111
Q ss_pred --hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 336 --IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 336 --~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.....+.+-...+. .+++.|+..|.+..|+...|..+
T Consensus 242 ~~~~~~~~~~l~~li~---~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 242 RYCPPNCPPSFFPITV---RCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp HTCCTTCCTTHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 11222222222222 57888999999999998888765
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=262.05 Aligned_cols=240 Identities=30% Similarity=0.502 Sum_probs=177.6
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+.+.|++.+.||+|+||.||+|.+..++..||+|++...... ..+.+.+|+++++++ +||||+++++++.+..
T Consensus 4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~ 79 (277)
T 3f3z_A 4 KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSL-DHPNIIRLYETFEDNT 79 (277)
T ss_dssp --CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred hhhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence 345667899999999999999999999999999999999765432 346788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
..|+|||||.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+..++.++.+||+|||++..+
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred eEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999999999999988888999999999999999999999999999999999999966666788999999999877
Q ss_pred CCCCceee-eeeccC------------CCCcchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhccHHHH
Q 040003 283 RPGLTFRV-WLRLHF------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLSEEEI 345 (489)
Q Consensus 283 ~~~~~~~~-~~~~~y------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~ 345 (489)
........ ..+..| ..+-.+.+.++.+++.|..+|....-.... .+ ...........++.+-.
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 160 KPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHH
T ss_pred cCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHH
Confidence 65443221 111111 111134467777777777776542110000 00 00000000012233333
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..+. +++..|+..|++..|+.
T Consensus 240 ~li~---~~l~~dp~~R~s~~~~l 260 (277)
T 3f3z_A 240 SLIR---RLLTKSPKQRITSLQAL 260 (277)
T ss_dssp HHHH---HHTCSSTTTSCCHHHHT
T ss_pred HHHH---HHccCChhhCcCHHHHh
Confidence 3332 56788888888888864
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=274.47 Aligned_cols=241 Identities=21% Similarity=0.277 Sum_probs=177.4
Q ss_pred ccceeecceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE 199 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 199 (489)
.+.|++++.||+|+||+||+|++.. ++..||+|++... ......+.+.+|+++|+.+.+||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT--CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC--cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 3569999999999999999998753 4567999998654 345667889999999999967999999999999
Q ss_pred eCCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeee
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~ 263 (489)
+.+.+|+|||||.+|+|.+++...+ .++...+..++.||+.||.|||++|||||||||+|||+
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll- 236 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV- 236 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE-
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE-
Confidence 9999999999999999999997653 47889999999999999999999999999999999999
Q ss_pred eCCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCC
Q 040003 264 NQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDK 325 (489)
Q Consensus 264 ~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~ 325 (489)
+.++.+||+|||+|+.+........ ..+..| ++. -++.+.++.+++. |..+|+.......
T Consensus 237 --~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~ 314 (370)
T 2psq_A 237 --TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314 (370)
T ss_dssp --CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred --CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 7788999999999987654322111 111112 121 1345788888887 8887765432110
Q ss_pred C-CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 326 V-AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 326 ~-~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. .+............+.+-...+. +++..|++.|.+..|+...|..+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 315 FKLLKEGHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp HHHHHTTCCCCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 0 00000000111223333222232 56788888889999988877654
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-32 Score=261.61 Aligned_cols=236 Identities=23% Similarity=0.254 Sum_probs=176.3
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+...+.|++.+.||+|+||+||+|.+..+++.||+|++....... .+.+.+|+.+++.+ +||||++++++|...+.
T Consensus 16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~ 91 (297)
T 3fxz_A 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMREN-KNPNIVNYLDSYLVGDE 91 (297)
T ss_dssp SCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred CChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH---HHHHHHHHHHHhcC-CCCCCCeEeEEEEECCE
Confidence 345567999999999999999999999999999999997654332 35688999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+|||||.||+|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|..+.
T Consensus 92 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECC
T ss_pred EEEEEECCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE---CCCCCEEEeeCCCceecC
Confidence 9999999999999998865 479999999999999999999999999999999999999 677889999999998776
Q ss_pred CCCceee--eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CC--CCCcchhhhhhccHHHH
Q 040003 284 PGLTFRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV--PPIGDRVIAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 345 (489)
....... ..+..| ++ +.++.+.++.+++.|..+|......... .+ ...........++..-.
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHH
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHH
Confidence 4433221 222222 22 1234578888999998887643210000 00 00000001122333323
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+. +++..|+..|++..|+..
T Consensus 248 ~li~---~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 248 DFLN---RCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHH---HHSCSSTTTSCCHHHHTT
T ss_pred HHHH---HHccCChhHCcCHHHHhh
Confidence 3333 567788888888888743
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=269.24 Aligned_cols=237 Identities=29% Similarity=0.417 Sum_probs=161.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+.+|+++ +||||+++++++.+....
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 123 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEI 123 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeE
Confidence 44567999999999999999999999999999999997532 335678999999999 799999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||||.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+++....
T Consensus 124 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp EEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999999998888899999999999999999999999999999999999996544578999999999987654
Q ss_pred CCceee-eeeccC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCC--CC-CC--CcchhhhhhccHHHH
Q 040003 285 GLTFRV-WLRLHF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKV--AV-PP--IGDRVIAESLSEEEI 345 (489)
Q Consensus 285 ~~~~~~-~~~~~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~--~~~~~~~~~~~~~~~ 345 (489)
...... ..+..| ++.. ++.+.++.+++.|..+|......... .+ .. .........++.+-.
T Consensus 204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 283 (349)
T 2w4o_A 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAK 283 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHH
T ss_pred ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHH
Confidence 322111 122222 1211 23466777777777666433211000 00 00 000000012333333
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.++ +++..|++.|++..|+..
T Consensus 284 ~li~---~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 284 DLVR---KLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHHH---HHccCChhhCcCHHHHhc
Confidence 3333 667888888898887643
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-33 Score=284.32 Aligned_cols=239 Identities=28% Similarity=0.434 Sum_probs=183.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+++.||+|+||+||+|++..+|+.||||++.+...........+.+|+.+|+.+ +||||+++++++.+...+|+|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEE
Confidence 4699999999999999999999999999999999764322223456789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+....+..
T Consensus 95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCTTCC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhcccccc
Confidence 9999999999999888889999999999999999999999999999999999999 7778999999999998765443
Q ss_pred eee-eeeccC---------CCC-----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 288 FRV-WLRLHF---------LFF-----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 288 ~~~-~~~~~y---------pf~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
... ..+..| ++. -++.+.++.+++.|..+|......... .+.. ........++.+-.+.++
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~Li~-- 248 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD-GIFYTPQYLNPSVISLLK-- 248 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT-TCCCCCTTCCHHHHHHHH--
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc-CCcCCCccCCHHHHHHHH--
Confidence 221 222222 121 234578888999998888754321100 0000 000112234444444444
Q ss_pred HhhhcCCCCCCccHHHHHH--HHHH
Q 040003 352 FKMIDTDNSGYITLEELKK--GLQR 374 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~--~l~~ 374 (489)
+++..|+..|++.+|+.. ++..
T Consensus 249 -~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 249 -HMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp -HHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred -HHcCCCchhCcCHHHHHhCHHhhh
Confidence 567889999999999875 4543
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=269.97 Aligned_cols=236 Identities=28% Similarity=0.378 Sum_probs=176.4
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|++++.||+|+||+||+|++..+++.||+|++..... ....+.+.+|+.+++.+ +||||+++++++.+....|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~ 81 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 81 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEE
Confidence 45679999999999999999999999999999999975432 22346688999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceeccC
Confidence 999999999999998777789999999999999999999999999999999999999 67788999999999876433
Q ss_pred Ccee----eeeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCC--CC-CCCcchhhhhhccHHH
Q 040003 286 LTFR----VWLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AV-PPIGDRVIAESLSEEE 344 (489)
Q Consensus 286 ~~~~----~~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 344 (489)
.... ...+..| ++ +-++.+.++.+++.|..+|....-.... .+ ...........++.+.
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 238 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHH
Confidence 2211 1122222 12 2235578999999999888653221110 00 0000000112334443
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+.+. +++..|++.|++.+|+..
T Consensus 239 ~~li~---~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 239 LALLH---KILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred HHHHH---HHccCChhhCcCHHHHhh
Confidence 33333 568889999999988743
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-33 Score=279.41 Aligned_cols=190 Identities=21% Similarity=0.266 Sum_probs=157.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+|..+ +||||++++++|.+...+||
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEE
Confidence 35699999999999999999999999999999999764322233345688999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||.||+|.+++.+.+ .+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheeccCC
Confidence 999999999999998764 79999999999999999999999999999999999999 77889999999999887654
Q ss_pred Cceee---eeeccC------------------C--CCcchhHHHHHHHhcccccCCCC
Q 040003 286 LTFRV---WLRLHF------------------L--FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 286 ~~~~~---~~~~~y------------------p--f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..... +.+..| . -+-++.+.++.+++.|..+|...
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 33211 112222 1 11234477888888888877643
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=269.76 Aligned_cols=234 Identities=29% Similarity=0.472 Sum_probs=168.5
Q ss_pred ccceeec---ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 127 KEMYSLG---RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 127 ~~~y~~~---~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.|++. +.||+|+||+||+|++..+++.||||++.+. ....+.+|+.+++.+.+||||+++++++.+...
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~ 80 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH 80 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE
Confidence 3457764 7899999999999999999999999999653 235678899999999669999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+....+||+|||+++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 81 TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp EEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred EEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 99999999999999999988899999999999999999999999999999999999999654445589999999998765
Q ss_pred CCCceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--------CCCCC---cchhhh
Q 040003 284 PGLTFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--------AVPPI---GDRVIA 337 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~---~~~~~~ 337 (489)
....... ..+..| ++. .++.+.++.+++.|..+|......... .+... ......
T Consensus 161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (325)
T 3kn6_A 161 PDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW 240 (325)
T ss_dssp C----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHH
T ss_pred CCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccc
Confidence 4332111 112222 121 234578888999998888654321100 00000 000001
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..++.+-.+.++ .++..|+..|++..|+.
T Consensus 241 ~~~s~~~~~li~---~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 241 KNVSQEAKDLIQ---GLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp HTSCHHHHHHHH---HHHCCCTTTCCCTTTST
T ss_pred cCCCHHHHHHHH---HHCCCChhHCCCHHHHh
Confidence 123444333333 56788888899988864
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=260.43 Aligned_cols=241 Identities=28% Similarity=0.438 Sum_probs=175.5
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+.+.|.+.++||+|+||+||+|.+..+++.||+|++..... ....+.+.+|+++|+++ +||||+++++++.+..
T Consensus 17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 93 (285)
T 3is5_A 17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYH 93 (285)
T ss_dssp SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhC-CCchHHhHHHheecCC
Confidence 45666789999999999999999999999999999999976542 22357788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 203 AVHVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
..|+|||||.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+...+..+.+||+|||+
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 999999999999999988543 6799999999999999999999999999999999999996655678899999999
Q ss_pred ccccCCCCceee-eeeccC--------C----CCcchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchhhhhhccH
Q 040003 279 SMFFRPGLTFRV-WLRLHF--------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRVIAESLSE 342 (489)
Q Consensus 279 a~~~~~~~~~~~-~~~~~y--------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 342 (489)
+..+........ ..+..| . -+.++.+.++.+++.|..+|......... .............++.
T Consensus 174 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (285)
T 3is5_A 174 AELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTP 253 (285)
T ss_dssp CCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCH
T ss_pred ceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCH
Confidence 987654332221 111112 1 11234577888888888887654321100 0000000000112333
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+..+.+. +++..|++.|++..|+.
T Consensus 254 ~~~~li~---~~L~~dP~~Rps~~e~l 277 (285)
T 3is5_A 254 QAVDLLK---QMLTKDPERRPSAAQVL 277 (285)
T ss_dssp HHHHHHH---HHTCSCTTTSCCHHHHH
T ss_pred HHHHHHH---HHccCChhhCcCHHHHh
Confidence 3333333 56778888888888864
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=282.02 Aligned_cols=234 Identities=22% Similarity=0.267 Sum_probs=165.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+|+.+ +||||+++++++.+.+.+|||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEE
Confidence 4699999999999999999999999999999999865444455567788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.||+|.+++...+.+++..+..++.||+.||+|||+ +|||||||||+|||+ +.++.+||+|||+|+......
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE---CSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE---CCCCCEEEccCCCceeccCCC
Confidence 9999999999999888899999999999999999999998 999999999999999 677899999999998643322
Q ss_pred cee--eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHH
Q 040003 287 TFR--VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 287 ~~~--~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
... ...+..| ++. .++.+.++.+++.|..+|......... .+.. ........++.+-.+.+.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~li~- 381 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-EEIRFPRTLGPEAKSLLS- 381 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-CCCCCCTTSCHHHHHHHH-
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh-CCCCCCccCCHHHHHHHH-
Confidence 111 1222222 121 134477888888888777543221000 0000 000011233443333333
Q ss_pred HHhhhcCCCCCCc-----cHHHHH
Q 040003 351 MFKMIDTDNSGYI-----TLEELK 369 (489)
Q Consensus 351 ~F~~~D~d~~g~i-----~~~el~ 369 (489)
+++..|+..|+ +.+|+.
T Consensus 382 --~~L~~dP~~R~~~~~~t~~ell 403 (446)
T 4ejn_A 382 --GLLKKDPKQRLGGGSEDAKEIM 403 (446)
T ss_dssp --HHTCSSTTTSTTCSTTTHHHHH
T ss_pred --HHcccCHHHhCCCCCCCHHHHH
Confidence 45777888888 777764
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-32 Score=265.36 Aligned_cols=188 Identities=25% Similarity=0.362 Sum_probs=143.4
Q ss_pred cceeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+|+.+ +||||+++++++.+.+.
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSC
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCE
Confidence 56999999999999999999985 68999999999765432 223456688999999999 79999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+|||||.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE---CCCCcEEEEeCCcccccc
Confidence 99999999999999999888899999999999999999999999999999999999999 677899999999998653
Q ss_pred CCCceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 284 PGLTFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
....... ..+..| ++. .++.+.++.+++.|..+|..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 3221111 111112 111 12446778888888777754
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=259.20 Aligned_cols=150 Identities=27% Similarity=0.446 Sum_probs=134.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|+++++||+|+||+||+|++..+++.||+|++..... .......+.+|+.+|+++ +||||+++++++.+...+|+|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEE
Confidence 459999999999999999999999999999999976543 334557788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||.+ +|.+.+.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFG 152 (292)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecC
Confidence 999976 56555544 5789999999999999999999999999999999999999 777899999999998764
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=267.85 Aligned_cols=243 Identities=22% Similarity=0.267 Sum_probs=174.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-- 202 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 202 (489)
.+.+.|++++.||+|+||.||+|++..+++.||+|++.............+.+|+.+++++ +||||+++++++....
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETT
T ss_pred eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCC
Confidence 4556799999999999999999999999999999999876656667778899999999999 8999999999987654
Q ss_pred --eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 203 --AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..|+|||||+|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---ETTSCEEECCCSCC-
T ss_pred CcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE---cCCCCEEEeeccCcc
Confidence 349999999999999999888899999999999999999999999999999999999999 567789999999998
Q ss_pred ccCCCCcee-----eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CC--CCCcchhhhh
Q 040003 281 FFRPGLTFR-----VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AV--PPIGDRVIAE 338 (489)
Q Consensus 281 ~~~~~~~~~-----~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~ 338 (489)
.+....... .+.+..| ++. -++.+.++.+++.|..+|......... .+ ..........
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHST
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccC
Confidence 765432111 1222223 221 134578888999998887643210000 00 0000001111
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCcc-HHHHHHHHHH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYIT-LEELKKGLQR 374 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~-~~el~~~l~~ 374 (489)
.++.+-...+. +++..|+..|++ .++|...+.+
T Consensus 245 ~~~~~l~~li~---~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 245 GLSADLDAVVL---KALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp TCCHHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCCHHHHHHHH---HHHhcCHhhChhhHHHHHHHHHH
Confidence 23333333333 567788888874 4555555544
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=263.31 Aligned_cols=240 Identities=18% Similarity=0.174 Sum_probs=175.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++.+.||+|+||+||+|.+..+++ .||||++... ......+.+.+|+.+|+.+ +||||+++++++.+....
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG--YTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT--CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCC
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC--CCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCcc
Confidence 469999999999999999999986655 4999999643 3456667899999999999 799999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECC
T ss_pred EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCcccccc
Confidence 9999999999999999654 579999999999999999999999999999999999999 778899999999999875
Q ss_pred CCCceeee-----eeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 284 PGLTFRVW-----LRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 284 ~~~~~~~~-----~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........ .+..| ++ +-++.+.++.+++. |..+|......... .+...........++.+
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHA 282 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHH
Confidence 43322111 11112 11 11244677777776 77766432110000 00000000011123333
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
-...+ -.++..|+..|.++.|+...|..+-
T Consensus 283 l~~li---~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 283 LHQLM---LDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp HHHHH---HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHH---HHHccCChhhCcCHHHHHHHHHHHH
Confidence 22222 3567888899999999988887753
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-31 Score=276.58 Aligned_cols=152 Identities=26% Similarity=0.402 Sum_probs=128.2
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----- 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 200 (489)
+.+.|++++.||+|+||+||+|+++.+++.||||++.+. .......+++.+|+.+|++| +|||||++++++..
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTT
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCccc
Confidence 346799999999999999999999999999999999653 34556678899999999999 89999999999943
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
...+|+||||+ +++|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLAR 204 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTCB
T ss_pred CceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccccch
Confidence 35799999998 57999999888889999999999999999999999999999999999999 778899999999998
Q ss_pred ccC
Q 040003 281 FFR 283 (489)
Q Consensus 281 ~~~ 283 (489)
.+.
T Consensus 205 ~~~ 207 (458)
T 3rp9_A 205 TVD 207 (458)
T ss_dssp CTT
T ss_pred hcc
Confidence 764
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=264.53 Aligned_cols=188 Identities=29% Similarity=0.320 Sum_probs=159.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|.+++.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEE
Confidence 5699999999999999999999999999999999877666677788899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE---cCCCCEEEeeccCceecccCcc
Confidence 9999999999999888889999999999999999999999999999999999999 6778899999999987653322
Q ss_pred eee--eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 FRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
... ..+..| ++. .++.+.++.+++.|...|..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 243 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence 111 111122 111 12446788888888877754
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=267.92 Aligned_cols=234 Identities=30% Similarity=0.413 Sum_probs=163.5
Q ss_pred ceee--cceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 129 MYSL--GRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 129 ~y~~--~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.|.+ .+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+++|++| +||||+++++++.+...+||
T Consensus 88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~l 163 (373)
T 2x4f_A 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVL 163 (373)
T ss_dssp TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc---ccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEE
Confidence 3554 67899999999999999999999999999753 234567899999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+.+ +..+.+||+|||+++.+...
T Consensus 164 v~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 164 VMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp EEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCEECCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCceecCCc
Confidence 99999999999988654 46999999999999999999999999999999999999865 34578999999999987654
Q ss_pred Cceee-eeeccC---------C----CCcchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV-WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~-~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~ 347 (489)
..... +.+..| . -+.++.+.++.+++.|..+|....-.... .+ ...........++.+-.+.
T Consensus 243 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 322 (373)
T 2x4f_A 243 EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF 322 (373)
T ss_dssp CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHH
T ss_pred cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHH
Confidence 33221 112222 0 11123356666666666665432110000 00 0000000011233333333
Q ss_pred HHHHHhhhcCCCCCCccHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+. +++..|+..|++..|+..
T Consensus 323 i~---~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 323 IS---KLLIKEKSWRISASEALK 342 (373)
T ss_dssp HH---TTSCSSGGGSCCHHHHHH
T ss_pred HH---HHcCCChhhCCCHHHHhc
Confidence 33 667788888888888754
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.9e-32 Score=269.84 Aligned_cols=241 Identities=21% Similarity=0.275 Sum_probs=178.0
Q ss_pred ccceeecceeccCCceEEEEEE-----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCV-----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||.||+|+ +..+++.||||++... ......+.+.+|+++|+++.+|||||++++++.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc--CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 3569999999999999999998 4556789999999653 34556678999999999997799999999999875
Q ss_pred C-eEEEEEeecCCCchHHHHHHcCC-------------------------------------------------------
Q 040003 202 V-AVHVVMELCAGGELFDRIIQRGH------------------------------------------------------- 225 (489)
Q Consensus 202 ~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 225 (489)
+ .+|+|||||.+|+|.+++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 5 49999999999999999976532
Q ss_pred -----------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee----
Q 040003 226 -----------YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV---- 290 (489)
Q Consensus 226 -----------~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~---- 290 (489)
+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+........
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCcEEEEeccceeeecccccchhcccc
Confidence 8899999999999999999999999999999999999 6678899999999987754333221
Q ss_pred eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhh
Q 040003 291 WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKM 354 (489)
Q Consensus 291 ~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 354 (489)
..+..| ++. -++.+.++.+++. |..+|+........ .+............+.+-.+.+. .+
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~ 332 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML---DC 332 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHH---HH
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHH---HH
Confidence 122223 222 1244788889986 88888754332110 00000000011223333333332 56
Q ss_pred hcCCCCCCccHHHHHHHHHHh
Q 040003 355 IDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 355 ~D~d~~g~i~~~el~~~l~~l 375 (489)
+..|+..|+++.|+...|..+
T Consensus 333 l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 333 WHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp TCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCChhhCCCHHHHHHHHHHH
Confidence 788888899999988877654
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3e-32 Score=292.47 Aligned_cols=231 Identities=22% Similarity=0.230 Sum_probs=171.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|..+|..+.+||||+.++++|.+...+|||
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 46999999999999999999999999999999997643322334567889999999887899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.......
T Consensus 421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCTTC
T ss_pred EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccCCc
Confidence 9999999999999988999999999999999999999999999999999999999 7788999999999986432221
Q ss_pred --eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 288 --FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 288 --~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
.....+..| ++. .++.+.++.+++.|..+|....-.... .+.. ........++.+-.+.++
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~-- 574 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME-HNVAYPKSMSKEAVAICK-- 574 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHS-SCCCCCTTSCHHHHHHHH--
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHh-CCCCCCccCCHHHHHHHH--
Confidence 111222222 111 123466777777777666543210000 0000 000111234444444444
Q ss_pred HhhhcCCCCCCccH
Q 040003 352 FKMIDTDNSGYITL 365 (489)
Q Consensus 352 F~~~D~d~~g~i~~ 365 (489)
.++..|+..|++.
T Consensus 575 -~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 575 -GLMTKHPGKRLGC 587 (674)
T ss_dssp -HHSCSSSTTCTTC
T ss_pred -HHccCCHHHCCCC
Confidence 4567788888775
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-31 Score=260.53 Aligned_cols=194 Identities=25% Similarity=0.375 Sum_probs=155.4
Q ss_pred cCcccceeec-ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 124 GNLKEMYSLG-RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 124 ~~~~~~y~~~-~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.+.+.|++. +.||+|+||+||+|.+..+++.||||++..... ...+.+.+|+++|.++.+||||+++++++.+.+
T Consensus 8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~ 84 (316)
T 2ac3_A 8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED 84 (316)
T ss_dssp CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 4566779995 789999999999999999999999999976432 234678899999999757999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|+|||||.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|||++..+
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 99999999999999999988889999999999999999999999999999999999999954444445999999999876
Q ss_pred CCCCcee---------eeeeccC------------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 283 RPGLTFR---------VWLRLHF------------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 283 ~~~~~~~---------~~~~~~y------------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
....... ...+..| .-+-++.+.++.+++.|..+|...
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 4321110 0112222 112234578899999999888754
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.98 E-value=9.4e-32 Score=263.82 Aligned_cols=239 Identities=28% Similarity=0.423 Sum_probs=177.3
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.+.|++++.||+|+||.||+|++..+++.||+|++........ ...+.+.+|+.+|+++ +||||+++++++.+.
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENR 87 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecC
Confidence 345679999999999999999999999999999999976543221 1357789999999999 799999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC----CeEEEeec
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA----PLKTIDFG 277 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~----~~kl~DFG 277 (489)
..+|+|||||.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+. .++ .+||+|||
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~---~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL---DKNIPIPHIKLIDFG 164 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES---CTTSSSCCEEECCCT
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEe---cCCCCcCCEEEccCc
Confidence 99999999999999999998888899999999999999999999999999999999999994 444 79999999
Q ss_pred cccccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC----CCCCCcchhhhhh
Q 040003 278 LSMFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV----AVPPIGDRVIAES 339 (489)
Q Consensus 278 la~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 339 (489)
++..+........ ..+..| ++. -++.+.++.+++.|..+|....-.... .............
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (321)
T 2a2a_A 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244 (321)
T ss_dssp TCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred cceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcc
Confidence 9988765433221 112222 121 124467788888887777543210000 0000000111122
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+.+-.+.+. .++..|++.|++..|+..
T Consensus 245 ~~~~~~~li~---~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 245 TSELAKDFIR---KLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCHHHHHHHH---TTSCSSTTTSCCHHHHHH
T ss_pred cCHHHHHHHH---HHcCCChhhCcCHHHHhc
Confidence 3333223333 678889999999988754
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-31 Score=255.65 Aligned_cols=228 Identities=13% Similarity=0.034 Sum_probs=177.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.++|++.+.||+|+||.||+|++..+++.||||++...........+.+.+|+.+++++ +||||+++++++.+.+..|+
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEE
Confidence 35699999999999999999999999999999999876655667778899999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||+|++|.+++.. + ....++..++.|++.||+|||++||+||||||+|||+ +.++.+||+++|....+.
T Consensus 109 v~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll---~~~g~~kl~~~~~~~~~~--- 180 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPATMPDAN--- 180 (286)
T ss_dssp EEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---ETTSCEEECSCCCCTTCC---
T ss_pred EEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE---cCCCCEEEEeccccCCCC---
Confidence 9999999999998843 3 4666788999999999999999999999999999999 567889999776543210
Q ss_pred ceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCC--CCC---CCc--chhhhhhccHHHHHHHHHHHhhhcCCC
Q 040003 287 TFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVP---PIG--DRVIAESLSEEEIAGLKEMFKMIDTDN 359 (489)
Q Consensus 287 ~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~---~~~--~~~~~~~~~~~~~~~l~~~F~~~D~d~ 359 (489)
..-+-++.+.++.+++.|..+|......... ... ... .......++.+-...+. +++..|+
T Consensus 181 ---------~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dP 248 (286)
T 3uqc_A 181 ---------PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA---RSVQGDG 248 (286)
T ss_dssp ---------HHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHH---HHHCTTS
T ss_pred ---------chhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHH---HHcccCC
Confidence 0112245588999999999998764332211 000 000 01112234444333333 5678888
Q ss_pred CCCccHHHHHHHHHHhC
Q 040003 360 SGYITLEELKKGLQRVG 376 (489)
Q Consensus 360 ~g~i~~~el~~~l~~lg 376 (489)
+.| +..|+...|..+.
T Consensus 249 ~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 249 GIR-SASTLLNLMQQAT 264 (286)
T ss_dssp SCC-CHHHHHHHHHHHH
T ss_pred ccC-CHHHHHHHHHHHh
Confidence 889 9999999998764
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-31 Score=261.67 Aligned_cols=248 Identities=19% Similarity=0.182 Sum_probs=180.9
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++ +||||+++++++...+..|+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEE
Confidence 45699999999999999999999999999999999766555556678899999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE---cCCCCEEEecCccCccccccc
Confidence 99999999999999888889999999999999999999999999999999999999 667889999999998765432
Q ss_pred cee---eeeeccC-------------CCCcchhHHHHHHHhcccccCCCCCCCCCC-CCCC--CcchhhhhhccHHHHHH
Q 040003 287 TFR---VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPP--IGDRVIAESLSEEEIAG 347 (489)
Q Consensus 287 ~~~---~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~ 347 (489)
... ...+..| .-+-++.+.++.+++.|..+|....+.... .+.. .........++.+-...
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 268 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAV 268 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHH
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHH
Confidence 111 0111112 112234577888888888877654321000 0000 00011112233333333
Q ss_pred HHHHHhhhcCCCCCCc-cHHHHHHHHHHhCCCCCH
Q 040003 348 LKEMFKMIDTDNSGYI-TLEELKKGLQRVGANLMD 381 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i-~~~el~~~l~~lg~~~~~ 381 (489)
+. +++..|++.|+ +.++|...|...-.....
T Consensus 269 i~---~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 269 IA---RGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp HH---HHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred HH---HhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 33 66788999998 899999988876544433
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=263.47 Aligned_cols=235 Identities=24% Similarity=0.404 Sum_probs=172.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEE
Confidence 5699999999999999999999999999999998754332223346788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCcccc
Confidence 9999999999999888899999999999999999999999999999999999999 7788999999999976544332
Q ss_pred eeeeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHHh
Q 040003 288 FRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMFK 353 (489)
Q Consensus 288 ~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F~ 353 (489)
.....+..| ++ +..+.+.++.+++.|..+|....+.... .+.. .........+.+-.+.+. +
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~---~ 240 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGARDLIS---R 240 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-TCCCCCTTSCHHHHHHHH---H
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh-CCCCCCCcCCHHHHHHHH---H
Confidence 222222222 11 1234577888888888877643321100 0000 000011122332222222 4
Q ss_pred hhcCCCCCCccHHHHHH
Q 040003 354 MIDTDNSGYITLEELKK 370 (489)
Q Consensus 354 ~~D~d~~g~i~~~el~~ 370 (489)
++..|+..|++.+|+..
T Consensus 241 ~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 241 LLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HCCSSGGGSCCHHHHHH
T ss_pred HhccChhhCCCHHHHhh
Confidence 56778888888888763
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-32 Score=285.24 Aligned_cols=236 Identities=23% Similarity=0.318 Sum_probs=179.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.+|+.+ +|||||+++++|.+...+|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEE
Confidence 35699999999999999999999999999999999765332233446788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||.||+|.+++...+. +++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceeccc
Confidence 9999999999999876543 9999999999999999999999999999999999999 7788999999999998866
Q ss_pred CCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCCC---cchhhhhhccHHHHH
Q 040003 285 GLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPI---GDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~ 346 (489)
+..... +.+..| ++ +-++.+.++.+++.|..+|......... .+... ........++.+-..
T Consensus 339 ~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~d 418 (576)
T 2acx_A 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARS 418 (576)
T ss_dssp TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHH
Confidence 544332 223333 11 1234588999999999888754221100 00000 000111234444444
Q ss_pred HHHHHHhhhcCCCCCCc-----cHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYI-----TLEELK 369 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i-----~~~el~ 369 (489)
.++ +++..|+..|+ +.+|+.
T Consensus 419 LI~---~lL~~dP~~R~g~~~~sa~eil 443 (576)
T 2acx_A 419 LCS---QLLCKDPAERLGCRGGSAREVK 443 (576)
T ss_dssp HHH---HHTCSSGGGSTTCSSSHHHHHH
T ss_pred HHH---HhccCCHHHcCCCCCCCHHHHH
Confidence 444 45677888888 667764
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=261.26 Aligned_cols=189 Identities=22% Similarity=0.352 Sum_probs=149.7
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|+++++||+|+||+||+|++. +++.||+|++.... ........+.+|+++|+++ +||||+++++++.+...+
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDA-EDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEE
Confidence 45567999999999999999999985 58999999996543 2233456788999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||.+ +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 95 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEETT
T ss_pred EEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---CCCCCEEEccCcCceecC
Confidence 999999975 888877664 459999999999999999999999999999999999999 677889999999998765
Q ss_pred CCCceee--eeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLTFRV--WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~~~~--~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
....... ..+..| ++ +-++.+.++.+++.|..+|+..
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 223 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGV 223 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCC
Confidence 3322111 112122 11 1234577888888888877643
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=261.92 Aligned_cols=240 Identities=20% Similarity=0.208 Sum_probs=173.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||+||+|++ +++.||+|++.... ......+.+.+|+++|+++ +||||+++++++.+...+|+
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQD-FHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCC-CSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCC-CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEE
Confidence 45699999999999999999986 57899999987654 3455677899999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 207 VMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
|||||.+|+|.+++...+. +++..+..++.||+.||.|||++| |+||||||+|||+ +.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEEECCCCCCcc
Confidence 9999999999999976543 899999999999999999999999 9999999999999 7778999999999986
Q ss_pred cCCCCcee--eeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchhhhhhccHHH
Q 040003 282 FRPGLTFR--VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRVIAESLSEEE 344 (489)
Q Consensus 282 ~~~~~~~~--~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 344 (489)
........ ...+..| ++ +-++.+.++.+++.|..+|......... .+ .......+...++.+-
T Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 268 (309)
T 3p86_A 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQV 268 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHH
T ss_pred ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHH
Confidence 54332211 1222222 12 1234578888999888877543210000 00 0000011122344443
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.+.+. .++..|+..|++..|+.+.|+.+-
T Consensus 269 ~~li~---~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 269 AAIIE---GCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHH---HHccCChhhCcCHHHHHHHHHHHH
Confidence 33333 567888999999999988887763
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.7e-31 Score=257.43 Aligned_cols=156 Identities=35% Similarity=0.625 Sum_probs=138.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.+ +||||+++++++.+....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHY 81 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEE
Confidence 45567999999999999999999999999999999997543 22335688999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+|||||.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+...+..+.+||+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999999999999998888999999999999999999999999999999999999996555678899999999976543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=263.46 Aligned_cols=154 Identities=27% Similarity=0.429 Sum_probs=132.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|+++++||+|+||+||+|++..+++.||||++.... ......+.+.+|+.+|+++ +||||+++++++.+...+||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc-cccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEE
Confidence 356999999999999999999999999999999997543 2233456678999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeeccccccC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~~ 283 (489)
|||||. |+|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||+... +..+.+||+|||+|+.+.
T Consensus 111 v~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred EEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 999997 5999999888889999999999999999999999999999999999999533 234569999999998764
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=272.19 Aligned_cols=241 Identities=27% Similarity=0.353 Sum_probs=173.9
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC-----HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT-----EEDVEDVRREIRIMHHLAGHPNVIQIVGAYE 199 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 199 (489)
.+.+.|.+.+.||+|+||+||+|.+..+++.||+|++.+..... ......+.+|+.+|+++ +||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence 34567999999999999999999999999999999998654321 22233578999999999 8999999999985
Q ss_pred eCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
. ...|+|||||.+|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+...+....+||+|||+|
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred c-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 4 568999999999999999888888999999999999999999999999999999999999966555667999999999
Q ss_pred cccCCCCceee-eeeccC------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CCCC---Ccchhhh
Q 040003 280 MFFRPGLTFRV-WLRLHF------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPP---IGDRVIA 337 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~---~~~~~~~ 337 (489)
+.+........ ..+..| ++ +.++.+.++.+++.|..+|......... .+.. .......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~ 369 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhh
Confidence 88754432221 222222 11 1234578899999999988754321110 0000 0000111
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
..++.+-.+.+. +++..|+..|++.+|+..
T Consensus 370 ~~~~~~~~~li~---~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 370 AEVSEKALDLVK---KLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TTSCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred cccCHHHHHHHH---HHccCChhHCcCHHHHhC
Confidence 223333333333 567788888998887643
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=252.45 Aligned_cols=159 Identities=34% Similarity=0.572 Sum_probs=141.5
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--C----HHHHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--T----EEDVEDVRREIRIMHHLAGHPNVIQIVGAY 198 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--~----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 198 (489)
.+.+.|++.+.||+|+||.||+|.+..+++.||+|++...... . ....+.+.+|+++|+++.+||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3456799999999999999999999999999999999754321 1 233467889999999996699999999999
Q ss_pred EeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 199 EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 199 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
.+....|+||||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEecccc
Confidence 9999999999999999999999888899999999999999999999999999999999999999 6778899999999
Q ss_pred ccccCCCC
Q 040003 279 SMFFRPGL 286 (489)
Q Consensus 279 a~~~~~~~ 286 (489)
+..+..+.
T Consensus 171 ~~~~~~~~ 178 (298)
T 1phk_A 171 SCQLDPGE 178 (298)
T ss_dssp CEECCTTC
T ss_pred hhhcCCCc
Confidence 98775543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=257.83 Aligned_cols=234 Identities=23% Similarity=0.316 Sum_probs=165.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC-----------------------HHHHHHHHHHHHHHHH
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT-----------------------EEDVEDVRREIRIMHH 184 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~-----------------------~~~~~~~~~E~~~l~~ 184 (489)
+.|++.+.||+|+||.||+|++..+++.||||++.+..... ....+.+.+|+++|++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 46999999999999999999999999999999997654221 1224568899999999
Q ss_pred hcCCCCeeEEEEEEEe--CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEee
Q 040003 185 LAGHPNVIQIVGAYED--AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLF 262 (489)
Q Consensus 185 l~~hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill 262 (489)
+ +||||+++++++.+ ...+|+|||||.+++|.+++ ..+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 170 (298)
T 2zv2_A 93 L-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170 (298)
T ss_dssp C-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 9 89999999999987 67899999999999998754 34579999999999999999999999999999999999999
Q ss_pred eeCCCCCCeEEEeeccccccCCCCceee--eeeccC-----------CC-----CcchhHHHHHHHhcccccCCCCCCCC
Q 040003 263 INQQEEAPLKTIDFGLSMFFRPGLTFRV--WLRLHF-----------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 263 ~~~~~~~~~kl~DFGla~~~~~~~~~~~--~~~~~y-----------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
+.++.+||+|||+++.+........ ..+..| .+ +.++.+.++.+++.|..+|.......
T Consensus 171 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 171 ---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp ---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 6778999999999988764432211 122222 11 22345778888998888776432100
Q ss_pred CC-CCCC-CcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 325 KV-AVPP-IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 325 ~~-~~~~-~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.. .+.. .........++.+-.+.+. +++..|++.|++..|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~R~s~~e~l 291 (298)
T 2zv2_A 248 LHSKIKSQALEFPDQPDIAEDLKDLIT---RMLDKNPESRIVVPEIK 291 (298)
T ss_dssp HHHHHHHCCCCCCSSSCCCHHHHHHHH---HHTCSCTTTSCCHHHHT
T ss_pred HHHHHhcccCCCCCccccCHHHHHHHH---HHhhcChhhCCCHHHHh
Confidence 00 0000 0000000123333222222 56778888888887764
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=267.43 Aligned_cols=240 Identities=21% Similarity=0.287 Sum_probs=177.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCC-------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ-------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.|.+++.||+|+||+||+|++..++ ..||+|++... ........+.+|+++++++.+|||||++++++.+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 56999999999999999999976433 57999998654 3456678899999999999779999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+..|+|||||.+|+|.+++.... .+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll-- 224 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-- 224 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE--
Confidence 999999999999999999998753 48999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+|+.+........ ..+..| .+. -++.+.++.+++. |..+|+........
T Consensus 225 -~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 225 -TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp -CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred -cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 6778999999999987654322111 111112 111 1244677888887 77777643221100
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+...........++.+-...+. .++..|++.|++..|+...|..+
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 304 KLLKEGHRMDKPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp HHHHTTCCCCCCSSCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCccCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 00000000011223333333333 56788888899999988877664
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=254.56 Aligned_cols=237 Identities=22% Similarity=0.316 Sum_probs=174.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++ +||||+++++++.+....|+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEE
Confidence 35699999999999999999999999999999999754322222346789999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE---CTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEEeecceeeccCC
Confidence 99999999999998765 578999999999999999999999999999999999999 67788999999999876532
Q ss_pred Ccee--eeeeccC-------------CCCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHH
Q 040003 286 LTFR--VWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 286 ~~~~--~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
.... ...+..| .-+-++.+.++.+++.|..+|......................++.+-.+.+.
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~- 244 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIH- 244 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHH-
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHH-
Confidence 2111 1111111 12223557889999999988875543221100000011112233443333333
Q ss_pred HHhhhcCCCCCCccHHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~ 370 (489)
+++..|++.|++.+|+..
T Consensus 245 --~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 245 --QLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --HHSCSSGGGSCCHHHHTT
T ss_pred --HHcccCHhhCCCHHHHhc
Confidence 567888888998888643
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-32 Score=270.53 Aligned_cols=243 Identities=17% Similarity=0.201 Sum_probs=173.2
Q ss_pred ccceeecceeccCCceEEEEEE-----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCV-----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||+||+|. +..+++.||||++... ........+.+|+.+|+++ +|||||++++++.+.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQS 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecC
Confidence 3569999999999999999999 4457789999998642 3455667889999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG-------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
...|+|||||.||+|.+++...+ .+++..+..++.||+.||.|||++|||||||||+|||+...+....+||+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999999997653 48899999999999999999999999999999999999544455679999
Q ss_pred eeccccccCCCCcee----eeeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchh
Q 040003 275 DFGLSMFFRPGLTFR----VWLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRV 335 (489)
Q Consensus 275 DFGla~~~~~~~~~~----~~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~ 335 (489)
|||+|+.+....... ...+..| .+ +-++.+.++.+++. |..+|......... .+.......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~ 306 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 306 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999998652211110 0111112 11 12344777888886 77777543211000 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
....++.+-.+.+ -.++..|+..|++..|+...|..+
T Consensus 307 ~~~~~~~~l~~li---~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 307 PPKNCPGPVYRIM---TQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp CCTTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCccCCHHHHHHH---HHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1112233222222 356788888899999988877654
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=264.45 Aligned_cols=191 Identities=29% Similarity=0.452 Sum_probs=157.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-C----HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-T----EEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-~----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.+.|++.+.||+|+||.||+|++..+|+.||||++...... . ....+.+.+|+.+++++.+||||+++++++..
T Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 446799999999999999999999999999999998754321 1 12246788999999999679999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
....|+|||||.|++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.
T Consensus 172 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 172 SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSC 248 (365)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCccc
Confidence 99999999999999999999888889999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCCCceee-eeeccC---------------CC----CcchhHHHHHHHhcccccCCC
Q 040003 281 FFRPGLTFRV-WLRLHF---------------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 281 ~~~~~~~~~~-~~~~~y---------------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+........ ..+..| ++ +-++.+.++.+++.|..+|..
T Consensus 249 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 249 HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 8765443222 112122 11 113457788888888877753
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-32 Score=270.19 Aligned_cols=239 Identities=21% Similarity=0.251 Sum_probs=175.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|.+..+++.||||++... ......+.+.+|+++|+++ +|||||++++++.+...+|+|
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEE
Confidence 5699999999999999999999999999999998643 2345566788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||++|+|.+++...+ .+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+....+.
T Consensus 191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECTTSE
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEECcCCCceecCCCc
Confidence 99999999999997654 69999999999999999999999999999999999999 677899999999998754432
Q ss_pred ceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 287 TFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 287 ~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
.... ..+..| .| +-++.+.++.+++. |..+|+........ .+.+..........+.+-.+.
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 347 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRL 347 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 1111 011112 11 11244677888886 77776543211000 000000000111222222222
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+ -+++..|++.|++..++...|..+
T Consensus 348 i---~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 348 M---EQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp H---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H---HHHcCCCchhCcCHHHHHHHHHHH
Confidence 2 256788888889998888877654
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=260.38 Aligned_cols=149 Identities=26% Similarity=0.390 Sum_probs=120.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|++..+++.||+|++.... .....+.+.+|+.+|+++ +||||+++++++.+.+.+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEE
Confidence 45999999999999999999999999999999997543 222345678999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 208 MELCAGGELFDRIIQR------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
||||. |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE---cCCCCEEECcCcccee
Confidence 99997 5999988654 358999999999999999999999999999999999999 7778999999999987
Q ss_pred cC
Q 040003 282 FR 283 (489)
Q Consensus 282 ~~ 283 (489)
+.
T Consensus 158 ~~ 159 (317)
T 2pmi_A 158 FG 159 (317)
T ss_dssp TT
T ss_pred cC
Confidence 64
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=254.51 Aligned_cols=160 Identities=36% Similarity=0.682 Sum_probs=142.9
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.+.+.|++++.||+|+||.||+|.+..+++.||+|++...... ....+.+.+|+++++++ +||||+++++++.+...
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCe
Confidence 34556799999999999999999999999999999999764432 23457788999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
.|+||||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++..+.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999999999888899999999999999999999999999999999999999655456689999999998775
Q ss_pred CC
Q 040003 284 PG 285 (489)
Q Consensus 284 ~~ 285 (489)
..
T Consensus 176 ~~ 177 (287)
T 2wei_A 176 QN 177 (287)
T ss_dssp CC
T ss_pred CC
Confidence 44
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=255.32 Aligned_cols=154 Identities=24% Similarity=0.355 Sum_probs=130.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC--HHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEeCC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT--EEDVEDVRREIRIMHHLA--GHPNVIQIVGAYEDAV 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~ 202 (489)
.++|+++++||+|+||+||+|++..+++.||+|++....... ......+.+|+.+++.+. +||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 456999999999999999999999999999999997543211 111245667888887773 4999999999998765
Q ss_pred -----eEEEEEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 203 -----AVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 203 -----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
.+++||||+. ++|.+++..... +++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~D 163 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLAD 163 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEEECS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEEee
Confidence 5899999996 599999877644 8999999999999999999999999999999999999 6778899999
Q ss_pred eccccccCC
Q 040003 276 FGLSMFFRP 284 (489)
Q Consensus 276 FGla~~~~~ 284 (489)
||+|+.+..
T Consensus 164 fg~a~~~~~ 172 (308)
T 3g33_A 164 FGLARIYSY 172 (308)
T ss_dssp CSCTTTSTT
T ss_pred CccccccCC
Confidence 999987653
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=253.60 Aligned_cols=189 Identities=29% Similarity=0.323 Sum_probs=159.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|.+++.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+.+..|+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEE
Confidence 35699999999999999999999999999999999877666667778899999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE---cCCCCEEEEeccCceecccCc
Confidence 99999999999999888889999999999999999999999999999999999999 677889999999998765332
Q ss_pred ceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 287 TFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ..+..| ++. -++.+.++.+++.|...|..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 217 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2111 111112 111 12346778888888877754
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=265.27 Aligned_cols=189 Identities=16% Similarity=0.136 Sum_probs=157.8
Q ss_pred cceeecceeccC--CceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 128 EMYSLGRKLGQG--QFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G--~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.|+++++||+| +||+||+|++..+++.||||++..... .....+.+.+|+.+|+.+ +|||||++++++.+.+.+|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEE
Confidence 469999999999 999999999999999999999976543 455677889999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 206 VVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|||||.+|+|.+++... +.+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccccceeec
Confidence 999999999999999775 679999999999999999999999999999999999999 778899999999987543
Q ss_pred CCCceee-------------------eeec---cCC--CCcchhHHHHHHHhcccccCCCCC
Q 040003 284 PGLTFRV-------------------WLRL---HFL--FFQKQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 284 ~~~~~~~-------------------~~~~---~yp--f~~~~~~~~~~~i~~~~~~~~~~~ 321 (489)
....... ++.+ .|. -+.++.++++.+++.|..+|....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 2211100 1111 111 122355788999999998887543
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=260.61 Aligned_cols=242 Identities=17% Similarity=0.194 Sum_probs=176.8
Q ss_pred ccceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||.||+|++. .+++.||+|++... ......+.+.+|+.+|+++ +||||+++++++.+.
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEF-DNPNIVKLLGVCAVG 122 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc--cCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccC
Confidence 356999999999999999999987 35589999998754 2455667899999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 040003 202 VAVHVVMELCAGGELFDRIIQR------------------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKP 257 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~------------------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp 257 (489)
...|+|||||.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp 202 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 202 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence 9999999999999999999763 5689999999999999999999999999999999
Q ss_pred CCEeeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCC
Q 040003 258 ENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPG 319 (489)
Q Consensus 258 ~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~ 319 (489)
+|||+ +.++.+||+|||+++.+........ ..+..| ++. -++.+.++.+++. |..+|..
T Consensus 203 ~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 203 RNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp GGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ceEEE---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999 6678899999999987643221111 111112 111 1234667777776 7666653
Q ss_pred CCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC
Q 040003 320 SLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA 377 (489)
Q Consensus 320 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~ 377 (489)
....... .+...........++.+-...++ .++..|++.|++..|+...|..+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 280 MAHEEVIYYVRDGNILACPENCPLELYNLMR---LCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CChHHHHHHHhCCCcCCCCCCCCHHHHHHHH---HHcccCcccCCCHHHHHHHHHHHHh
Confidence 2210000 00000000111223333233333 5678888889999999988887643
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=255.63 Aligned_cols=149 Identities=29% Similarity=0.426 Sum_probs=132.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|++++.||+|+||+||+|++ .+++.||+|++..... .......+.+|+++|+++ +||||+++++++.+...+|+|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEE
Confidence 4599999999999999999998 6789999999865432 222336778999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.+ +|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFG 151 (288)
T ss_dssp EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHC
T ss_pred EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccC
Confidence 999975 898888754 679999999999999999999999999999999999999 677899999999998764
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-31 Score=267.50 Aligned_cols=155 Identities=24% Similarity=0.401 Sum_probs=138.4
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC---
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--- 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 201 (489)
.+.+.|++++.||+|+||+||+|++..+++.||||++.+. .......+++.+|+.+|+++ +||||+++++++...
T Consensus 23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 100 (432)
T 3n9x_A 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLL 100 (432)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTT
T ss_pred eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCC
Confidence 4456799999999999999999999999999999999653 34556678899999999999 799999999999776
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|
T Consensus 101 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DFGla 176 (432)
T 3n9x_A 101 KFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLA 176 (432)
T ss_dssp TCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccCCCc
Confidence 67999999996 5999999887889999999999999999999999999999999999999 77889999999999
Q ss_pred cccCCC
Q 040003 280 MFFRPG 285 (489)
Q Consensus 280 ~~~~~~ 285 (489)
+.....
T Consensus 177 ~~~~~~ 182 (432)
T 3n9x_A 177 RTINSE 182 (432)
T ss_dssp EEC---
T ss_pred cccccc
Confidence 987543
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=262.45 Aligned_cols=245 Identities=18% Similarity=0.218 Sum_probs=176.8
Q ss_pred ccceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||.||+|.+. .+++.||+|++.... .....+.+.+|+.+|+++.+||||+++++++...
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 356999999999999999999973 466789999997432 2344578899999999997799999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG-----------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPE 258 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~ 258 (489)
+..|+|||||++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~ 201 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 99999999999999999997643 2788999999999999999999999999999999
Q ss_pred CEeeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCC
Q 040003 259 NFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGS 320 (489)
Q Consensus 259 Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~ 320 (489)
|||+ +.++.+||+|||++..+........ ..+..| ++. -++.+.++.+++. |..+|...
T Consensus 202 NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 202 NVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hEEE---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999 5677899999999987754433221 111122 221 2344778888886 88777654
Q ss_pred CCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC
Q 040003 321 LWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL 379 (489)
Q Consensus 321 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~ 379 (489)
...... .+............+.+-...+. .++..|++.|++..|+...|..+-...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 279 PVDANFYKLIQNGFKMDQPFYATEEIYIIMQ---SCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CCSHHHHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCHHHHHHHH---HHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 321100 00000000011122333222232 578889999999999999888875443
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=259.52 Aligned_cols=239 Identities=18% Similarity=0.246 Sum_probs=177.7
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|.+++.||+|+||.||+|.+. .+++.||+|++... ......+.+.+|+++|+.+ +||||+++++++.+.+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--ASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCC
Confidence 56999999999999999999983 45589999998643 3456678899999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCC------------------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQRGH------------------------YTERKAADLTRIIVGVVEACHSLGVMHRDLKPE 258 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~------------------------~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~ 258 (489)
..|+|||||.+++|.+++...+. +++..+..++.||+.||.|||++||+||||||+
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~ 179 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR 179 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchh
Confidence 99999999999999999986543 789999999999999999999999999999999
Q ss_pred CEeeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCC
Q 040003 259 NFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGS 320 (489)
Q Consensus 259 Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~ 320 (489)
|||+ +.++.+||+|||+++.+........ ..+..| ++. -++.+.++.+++. |..+|...
T Consensus 180 NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 180 NILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GEEE---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred eEEE---cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999 5677899999999987754433221 111112 111 1244778888887 87777654
Q ss_pred CCCCCC-CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 321 LWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 321 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...... .+...........++.+-...+. .++..|++.|++..|+...|.++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 257 PPERLFNLLKTGHRMERPDNCSEEMYRLML---QCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp CGGGHHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHHHHHHhhcCCcCCCCccCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 321100 00000000111233433333333 56788888999999998887664
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=263.33 Aligned_cols=234 Identities=25% Similarity=0.326 Sum_probs=180.6
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLAGHPNVIQIVGAY 198 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 198 (489)
+.+.+.|++.+.||+|+||+||+|++..+++.||||++........ .....+.+|+.+|+++ +||||++++++|
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~ 98 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIF 98 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence 3456779999999999999999999999999999999986543221 1334677899999999 899999999999
Q ss_pred EeCCeEEEEEeecCCC-chHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 199 EDAVAVHVVMELCAGG-ELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 199 ~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
.+...+|+||||+.+| +|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---cCCCcEEEeecc
Confidence 9999999999999777 999999888889999999999999999999999999999999999999 677899999999
Q ss_pred cccccCCCCceee-eeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccH
Q 040003 278 LSMFFRPGLTFRV-WLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSE 342 (489)
Q Consensus 278 la~~~~~~~~~~~-~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (489)
+++.+........ ..+..| ++ +.++.+.++.+++.|..+|..... ..... ......++.
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~--~~~~~~~~~ 249 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----TVEAA--IHPPYLVSK 249 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----GTTTC--CCCSSCCCH
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----HHhhc--cCCCcccCH
Confidence 9998765543322 223233 22 223557889999999888754211 00000 001112344
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+-...+. .++..|+..|++..|+..
T Consensus 250 ~l~~li~---~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 250 ELMSLVS---GLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp HHHHHHH---HHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHH---HHccCChhhCcCHHHHhc
Confidence 3333333 567889999999888754
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=282.70 Aligned_cols=234 Identities=18% Similarity=0.196 Sum_probs=170.1
Q ss_pred cceeccCCceEEEEEEE--cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEee
Q 040003 133 GRKLGQGQFGTTFLCVE--KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMEL 210 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 210 (489)
.++||+|+||+||+|.+ ..+++.||||+++... ......+.+.+|+++|++| +|||||++++++.. ..++|||||
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-~~~~lv~E~ 450 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVMEM 450 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEEEEEC
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-CCEEEEEEc
Confidence 35799999999999955 4567899999997543 3344567899999999999 79999999999965 568999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee
Q 040003 211 CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290 (489)
Q Consensus 211 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~ 290 (489)
|.+|+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||| +.++.+||+|||+|+.+........
T Consensus 451 ~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 451 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCTTHHHHTTC------
T ss_pred cCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE---eCCCCEEEEEcCCccccccCccccc
Confidence 9999999999888889999999999999999999999999999999999999 5567899999999998765443221
Q ss_pred -----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHH
Q 040003 291 -----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 291 -----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
..+..| .+. -++.+.++.+++. |..+|......... .+...........++.+-.+.+.
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~- 606 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN- 606 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH-
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH-
Confidence 111112 222 1244778888886 88887654321100 00000000111233333333333
Q ss_pred HHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 351 MFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.++..|+..|++..++...|+.+
T Consensus 607 --~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 607 --LCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp --HHTCSSTTTSCCHHHHHHHHHHH
T ss_pred --HHcCCCHhHCcCHHHHHHHHHHH
Confidence 57888999999999998887654
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-31 Score=252.81 Aligned_cols=240 Identities=28% Similarity=0.429 Sum_probs=172.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.|++++.||+|+||.||+|++..+++.||+|++........ ...+.+.+|+.+|+++ +||||+++++++.+...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCe
Confidence 3569999999999999999999999999999999976543321 2357789999999999 79999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla~~~ 282 (489)
.|+||||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+ ....+||+|||++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 999999999999999998888899999999999999999999999999999999999994322 1237999999999877
Q ss_pred CCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC----CCCCCcchhhhhhccHHH
Q 040003 283 RPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV----AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 344 (489)
........ ..+..| ++. -++.+.++.+++.|..+|......... ..............+.+-
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 242 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHH
Confidence 54433221 112222 111 123467788888887776543210000 000000001111222222
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+.+. +++..|++.|++..|+..
T Consensus 243 ~~li~---~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 243 KDFIR---RLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHHHH---HHccCCHhHCcCHHHHHh
Confidence 22222 567778888888888754
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=275.50 Aligned_cols=190 Identities=25% Similarity=0.359 Sum_probs=159.9
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++ +||||++++++|.+...+|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEE
Confidence 35699999999999999999999999999999999765433233456788999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||||.||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceeeec
Confidence 99999999999998764 369999999999999999999999999999999999999 77889999999999987
Q ss_pred CCCCceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 283 RPGLTFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 283 ~~~~~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
..+..... ..+..| ++. -++.+.++.+++.|..+|...
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 65543221 233333 121 234588999999999988754
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=260.54 Aligned_cols=243 Identities=22% Similarity=0.290 Sum_probs=173.0
Q ss_pred ccCcccceeec-ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 123 TGNLKEMYSLG-RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 123 ~~~~~~~y~~~-~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
...+.+.|.+. +.||+|+||+||+|++..+++.||+|++.+... .......+.+|+.+++.+.+||||+++++++.+.
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 34566778887 899999999999999999999999999976543 2334567889999999997789999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|+|||||.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+......+.+||+|||++
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a 181 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence 9999999999999999988543 67999999999999999999999999999999999999954334788999999999
Q ss_pred cccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC----CCCCCcchhhhhhcc
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV----AVPPIGDRVIAESLS 341 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 341 (489)
+.+........ ..+..| ++. -++.+.++.+++.|..+|......... .............++
T Consensus 182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 261 (327)
T 3lm5_A 182 RKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS 261 (327)
T ss_dssp EEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSC
T ss_pred cccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccC
Confidence 87754432221 122222 221 124467777888877776543211000 000000000011233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..-.+.+. .++..|+..|++.+|+.
T Consensus 262 ~~~~~li~---~~L~~dP~~Rpt~~~ll 286 (327)
T 3lm5_A 262 QLATDFIQ---SLLVKNPEKRPTAEICL 286 (327)
T ss_dssp HHHHHHHH---HHSCSSGGGSCCHHHHT
T ss_pred HHHHHHHH---HHcCCChhhCcCHHHHh
Confidence 33233333 56777888888888764
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=256.71 Aligned_cols=240 Identities=19% Similarity=0.249 Sum_probs=178.1
Q ss_pred cceeecceeccCCceEEEEEEE-----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE-----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++++.||+|+||.||+|.+ ..+++.||+|++... ......+.+.+|+.+|+++.+||||+++++++.+.+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc--hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 5699999999999999999985 457789999999754 334566789999999999977999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 203 AVHVVMELCAGGELFDRIIQRG------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
..|+|||||.+|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~-- 178 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL-- 178 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE--
Confidence 9999999999999999997654 38999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+++.......... ..+..| ++. -++.+.++.+++. |..+|.........
T Consensus 179 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 179 -THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp -ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred -cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 5678899999999988765543221 111122 111 1244778888887 88777654321100
Q ss_pred --CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 --AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 --~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-.+.+. .++..|+..|++..|+...|.++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 258 YKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCcccCCHHHHHHHH---HHcCCCchhCcCHHHHHHHHHHH
Confidence 00000000011223333222222 56788888889998888877653
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=251.89 Aligned_cols=187 Identities=24% Similarity=0.372 Sum_probs=153.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|+++++||+|+||+||+|++..+++.||+|++.... ......+.+.+|+++++++ +||||+++++++.+....|+|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEE
Confidence 56999999999999999999999999999999986543 3445567788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCccc
Confidence 9999999999988777889999999999999999999999999999999999999 6778999999999987753332
Q ss_pred eee--eeeccC----------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 FRV--WLRLHF----------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~--~~~~~y----------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
... ..+..| ++. .++.+.++.+++.|..+|+.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 205 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG 205 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 211 111112 222 23457788888888777754
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-31 Score=253.13 Aligned_cols=238 Identities=19% Similarity=0.234 Sum_probs=178.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||+||+|.+..+++.||+|++... ....+.+.+|+.+++++ +||||+++++++.+....|+
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEE
Confidence 35699999999999999999999999999999998643 23457889999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE---CGGGCEEECCCCGGGTSCS
T ss_pred EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE---cCCCCEEEccCccceeccC
Confidence 99999999999999764 458999999999999999999999999999999999999 6677899999999988765
Q ss_pred CCceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| ++. .++.+.++.+++. |..+|+........ .+...........++.+-.+
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHH
Confidence 443222 111122 121 2244778888887 77777654321100 00000000111223333333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+. .++..|+..|++..|+.+.|..+
T Consensus 244 li~---~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 244 LMR---ACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---HHhCCChhhCcCHHHHHHHHHHH
Confidence 333 46777888888998888877665
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=251.33 Aligned_cols=241 Identities=21% Similarity=0.240 Sum_probs=170.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++.+.+..|+|
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEE
Confidence 4599999999999999999999999999999999876556677778899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+.+++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~---~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE---cCCCCEEEEeccceeeec
Confidence 999999999998864 3568999999999999999999999999999999999999 677899999999998765
Q ss_pred CCCceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCC---CCCC-cchhhhhhccHHH
Q 040003 284 PGLTFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVA---VPPI-GDRVIAESLSEEE 344 (489)
Q Consensus 284 ~~~~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~ 344 (489)
....... ..+..| ++. .++.+.++.+++.|..+|....+..... +... ........++.+-
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHH
Confidence 4322111 111122 121 1244778888999888776543211000 0000 0000012233332
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...+. .+++.|++.|.+..|+...|..+
T Consensus 268 ~~li~---~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 268 RQLVN---MCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH---HHcCCChhhCCCHHHHHHHHHHH
Confidence 22222 56778888888888888877665
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=251.19 Aligned_cols=238 Identities=18% Similarity=0.182 Sum_probs=175.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+++++++ +||||+++++++.+....|+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l 80 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYI 80 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEE
Confidence 356999999999999999999876 567899999975432 235688999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 81 VTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCTT
T ss_pred EEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecchh
Confidence 999999999999997754 59999999999999999999999999999999999999 77889999999999877654
Q ss_pred Cceeeeeec---cC-------------CCCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRVWLRL---HF-------------LFFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~~~~~---~y-------------pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
......... .| .-+-++.+.++.+++. |..+|......... .+............+.+-...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 237 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQI 237 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHH
Confidence 432221111 12 1112344677788886 77776533211000 000000000111122222222
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
+-.++..|+..|++..|+.+.|..+.
T Consensus 238 ---i~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 238 ---MYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp ---HHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred ---HHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 23677888889999999988887764
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-31 Score=257.26 Aligned_cols=191 Identities=20% Similarity=0.293 Sum_probs=153.7
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--e
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--A 203 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~ 203 (489)
..+.|++.++||+|+||+||+|++..+++.||||++..... ....+.+.+|+++|+++ +||||+++++++.... .
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 83 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRH 83 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCC
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCce
Confidence 34669999999999999999999999999999999975432 22356778999999999 7999999999998765 7
Q ss_pred EEEEEeecCCCchHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee-CCCCCCeEEEeeccc
Q 040003 204 VHVVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN-QQEEAPLKTIDFGLS 279 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~-~~~~~~~kl~DFGla 279 (489)
.|+|||||.+++|.+++..... +++..+..++.||+.||.|||++||+||||||+|||+.. .+..+.+||+|||+|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 8999999999999999976533 899999999999999999999999999999999999733 344567999999999
Q ss_pred cccCCCCceee-eeeccC-----------------C----CCcchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF-----------------L----FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y-----------------p----f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.+........ ..+..| + -+.++.+.++.+++.|..+|..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 225 (319)
T 4euu_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (319)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 88765443221 111111 1 1123557888888888887753
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=250.50 Aligned_cols=235 Identities=29% Similarity=0.432 Sum_probs=170.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEE
Confidence 5699999999999999999999999999999999754322223356788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE---CTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE---CCCCCEEEeecccccccCCCcc
Confidence 9999999999999888889999999999999999999999999999999999999 6778899999999988755432
Q ss_pred eee-eeeccC---------CCC-----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 288 FRV-WLRLHF---------LFF-----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 288 ~~~-~~~~~y---------pf~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
... ..+..| ++. ..+.+.++.+++.|..+|......... .+.. ........++.+-...+.
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~-- 243 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG-GVFYIPEYLNRSVATLLM-- 243 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-CCCCCCTTSCHHHHHHHH--
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-CcccCchhcCHHHHHHHH--
Confidence 211 111112 111 123467888888888777543211000 0000 000011122222222222
Q ss_pred HhhhcCCCCCCccHHHHHH
Q 040003 352 FKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~ 370 (489)
.++..|++.|++..|+..
T Consensus 244 -~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 244 -HMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -HHTCSSGGGSCCHHHHHH
T ss_pred -HHccCChhhCCCHHHHHh
Confidence 556777777888877654
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=262.56 Aligned_cols=239 Identities=21% Similarity=0.214 Sum_probs=165.6
Q ss_pred cceeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++.+.||+|+||.||+|++. .++..||||++... ......+.+.+|+.+|+++ +||||+++++++.+....
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT--CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSC
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc--cCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCce
Confidence 45999999999999999999876 46778999998653 2456677899999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-------
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCccccccc
Confidence 99999999999999997654 69999999999999999999999999999999999999 778899999999998775
Q ss_pred CCCceee-----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 284 PGLTFRV-----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 284 ~~~~~~~-----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
....... ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 278 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAA 278 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHH
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHH
Confidence 4322111 011112 111 1234667777775 77666432110000 00000000001122222
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-... +-.++..|+..|.+..|+...|..+
T Consensus 279 l~~l---i~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 279 LYQL---MLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp HHHH---HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHH---HHHHhCcChhhCcCHHHHHHHHHHH
Confidence 2222 2367888999999999998888765
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-31 Score=251.97 Aligned_cols=235 Identities=25% Similarity=0.391 Sum_probs=172.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+++++.+ +||||+++++++.+....|+|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEE
Confidence 4599999999999999999999999999999998654322222346788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECSSSCB
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---cCCCCEEEecccccccCccccc
Confidence 9999999999999888899999999999999999999999999999999999999 6778899999999976654322
Q ss_pred eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHHh
Q 040003 288 FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMFK 353 (489)
Q Consensus 288 ~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F~ 353 (489)
.....+..| ++. -++.+.++.+++.|..+|....-.... .+... .......++.+-.+.+. .
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~---~ 245 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-DLKFPPFLSDGSKDLIS---K 245 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-CCCCCTTSCHHHHHHHH---H
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc-ccCCCCcCCHHHHHHHH---H
Confidence 222222222 111 124467788888887776532110000 00000 00011123333222332 4
Q ss_pred hhcCCCCCCccHHHHHH
Q 040003 354 MIDTDNSGYITLEELKK 370 (489)
Q Consensus 354 ~~D~d~~g~i~~~el~~ 370 (489)
++..|++.|++.+|+..
T Consensus 246 ~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 246 LLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HSCSSGGGSCCHHHHHT
T ss_pred HhhcCHhhCCCHHHHhh
Confidence 56777777888877653
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-31 Score=257.85 Aligned_cols=234 Identities=21% Similarity=0.192 Sum_probs=173.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|.+..+++.||||++..... .+.+.+|+.+++.|.+||||+++++++.+....|+|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 569999999999999999999999999999999875432 235788999999997799999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC-----eEEEeeccccc
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP-----LKTIDFGLSMF 281 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~-----~kl~DFGla~~ 281 (489)
|||| +++|.+++.. .+.+++..+..++.||+.||+|||++|||||||||+|||+ +.++. +||+|||+|+.
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill---~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI---GRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CCGGGTCTTSEEECCCTTCEE
T ss_pred EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---ccCCCCCCceEEEEEccccee
Confidence 9999 9999999876 3679999999999999999999999999999999999999 44444 99999999998
Q ss_pred cCCCCce---------eeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCC-CCCCcc-----
Q 040003 282 FRPGLTF---------RVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVA-VPPIGD----- 333 (489)
Q Consensus 282 ~~~~~~~---------~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~----- 333 (489)
+...... ....+..| ++. -++.+.++.+++.|..+|.......... +.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 7544321 11222233 121 1345788999999988887542211000 000000
Q ss_pred --hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 334 --RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 334 --~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.......+ +...+ +-.++..|+..+.+.+++...|..
T Consensus 240 ~~~~~~~~~p--~~~~l--i~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 240 PIEVLCENFP--EMATY--LRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp CHHHHTTTCH--HHHHH--HHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred CHHHHhccCh--HHHHH--HHHHHhCCCCCCCCHHHHHHHHHH
Confidence 00000111 22222 225677888889999988877754
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=259.39 Aligned_cols=240 Identities=20% Similarity=0.260 Sum_probs=161.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++++.||+|+||+||+|++..++. .||+|++..... .....+.+.+|+++++++ +||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC---
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccc
Confidence 569999999999999999999887765 899999875433 334567899999999999 899999999999877665
Q ss_pred ------EEEEeecCCCchHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 205 ------HVVMELCAGGELFDRIIQRG------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 205 ------~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
|+|||||.+|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli---~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE---cCCCCEE
Confidence 99999999999999986543 58999999999999999999999999999999999999 6778999
Q ss_pred EEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcc
Q 040003 273 TIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGD 333 (489)
Q Consensus 273 l~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~ 333 (489)
|+|||+|+.+........ ..+..| ++. -++.+.++.+++. |..+|......... .+.....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~ 257 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR 257 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCC
Confidence 999999987755433221 111112 111 2344778888887 77777643221100 0000000
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
......++.+-.+.+ -+++..|+..|++..|+...|..+
T Consensus 258 ~~~~~~~~~~l~~li---~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 258 LKQPPECMEEVYDLM---YQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp CCCCTTCCHHHHHHH---HHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCccCHHHHHHH---HHHccCChhhCcCHHHHHHHHHHH
Confidence 001122333322222 367888999999999998888765
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-30 Score=253.10 Aligned_cols=240 Identities=21% Similarity=0.265 Sum_probs=173.7
Q ss_pred cceeecceeccCCceEEEEEEEc-------CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-------ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-------~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.|++++.||+|+||.||+|.+. .++..||+|++... ......+.+.+|+.+|+.+.+||||+++++++.+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC--CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 56999999999999999999976 45678999998653 3456678899999999999779999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+.+|+|||||.+|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll-- 190 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-- 190 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE--
Confidence 999999999999999999997653 38899999999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+++.+........ ..+..| ++ +-++.+.++.+++. |..+|.........
T Consensus 191 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 191 -TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp -CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred -cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 6778999999999987765433221 111112 11 11234677778876 77766543211000
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-...+ -.++..|++.|++..|+...|..+
T Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li---~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 270 KLLKEGHRMDKPANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCccCCHHHHHHH---HHHccCChhhCcCHHHHHHHHHHH
Confidence 0000000001112233322222 256778888888888888777654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=267.60 Aligned_cols=187 Identities=20% Similarity=0.333 Sum_probs=149.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+.++|++++.||+|+||+||+|++..+++.||||++.+.. ......+++.+|+.+|+.+ +|||||++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccc
Confidence 3467999999999999999999999999999999997542 3455677889999999999 899999999999654
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..+|||||||.+ +|.+.+. ..+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 211 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCCC
T ss_pred cCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEEEee
Confidence 468999999976 5666653 358999999999999999999999999999999999999 77889999999999
Q ss_pred cccCCCCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.......... +.+..| ++ +.++.++++.+++.|...|++.
T Consensus 212 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 212 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp -----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 88765433222 333333 22 2245688899999998888764
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=256.13 Aligned_cols=234 Identities=20% Similarity=0.201 Sum_probs=167.2
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|++.++||+|+||+||+|++..+++.||||++.... ...........|+..+..+.+||||++++++|.+...+|
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~ 133 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY 133 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC-CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc-cChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence 3456999999999999999999999999999999986543 334455566677777777768999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+||||| +++|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||++.....
T Consensus 134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTCEECC-
T ss_pred EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEccceeeeeccc
Confidence 999999 67898888765 469999999999999999999999999999999999999 6778899999999987654
Q ss_pred CCceee-eeeccC--------CC----CcchhHHHHHHHhcccccC-CCCCCCCCCCCCCCcchhhhhhccHHHHHHHHH
Q 040003 285 GLTFRV-WLRLHF--------LF----FQKQRQSVLQTRLVRNLNE-PGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKE 350 (489)
Q Consensus 285 ~~~~~~-~~~~~y--------pf----~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (489)
...... ..+..| .+ +-++.+.++.+++.|...+ ....|.. .............++.+-.+.+.
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~- 286 (311)
T 3p1a_A 210 AGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ--LRQGYLPPEFTAGLSSELRSVLV- 286 (311)
T ss_dssp -----CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH--HTTTCCCHHHHTTSCHHHHHHHH-
T ss_pred CCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH--HhccCCCcccccCCCHHHHHHHH-
Confidence 322111 112222 11 1234477788888774332 2222111 00111111122233333333333
Q ss_pred HHhhhcCCCCCCccHHHHH
Q 040003 351 MFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 351 ~F~~~D~d~~g~i~~~el~ 369 (489)
.++..|++.|++..|+.
T Consensus 287 --~~L~~dP~~Rpt~~ell 303 (311)
T 3p1a_A 287 --MMLEPDPKLRATAEALL 303 (311)
T ss_dssp --HHSCSSTTTSCCHHHHH
T ss_pred --HHcCCChhhCcCHHHHH
Confidence 56788888888888864
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=256.21 Aligned_cols=237 Identities=22% Similarity=0.232 Sum_probs=173.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|++.+.||+|+||+||+|++..+++.||||++...........+.+.+|+++|+++ +||||+++++++.+....|
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 130 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW 130 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEE
Confidence 345699999999999999999999999999999999765544556667899999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||||. |+|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 131 lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 131 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSS
T ss_pred EEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEeeccCceecCC
Confidence 9999997 688887754 4679999999999999999999999999999999999999 5678899999999987754
Q ss_pred CCceee--------ee----eccCC--CCcchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchhhhhhccHHHHHHH
Q 040003 285 GLTFRV--------WL----RLHFL--FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 285 ~~~~~~--------~~----~~~yp--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l 348 (489)
...... ++ .+.|. -+-++.+.++.+++.|..+|......... .+ ............+.+-...+
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (348)
T 1u5q_A 207 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 286 (348)
T ss_dssp BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHH
T ss_pred CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence 332211 11 11111 11234577888888888777542110000 00 00000000112233222222
Q ss_pred HHHHhhhcCCCCCCccHHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~ 370 (489)
. .++..|++.|++.+|+..
T Consensus 287 ~---~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 287 D---SCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp H---HHTCSSGGGSCCHHHHTT
T ss_pred H---HHcccChhhCcCHHHHhh
Confidence 2 567788888888888754
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-30 Score=247.79 Aligned_cols=229 Identities=26% Similarity=0.341 Sum_probs=171.3
Q ss_pred cCcccceeec-ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--
Q 040003 124 GNLKEMYSLG-RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-- 200 (489)
Q Consensus 124 ~~~~~~y~~~-~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 200 (489)
+.+.+.|.+. +.||+|+||.||+|.+..+++.||+|++... ..+.+|+.++.++.+||||+++++++..
T Consensus 13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~ 84 (299)
T 3m2w_A 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLY 84 (299)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhc
Confidence 3445668887 7899999999999999999999999998642 4567899998666689999999999987
Q ss_pred --CCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 201 --AVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 201 --~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
...+|+|||||.+|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+...+.++.+||+||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 778999999999999999998764 6999999999999999999999999999999999999955444788999999
Q ss_pred ccccccCCCCceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCc----c---hhhhhhccHHHHHHH
Q 040003 277 GLSMFFRPGLTFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIG----D---RVIAESLSEEEIAGL 348 (489)
Q Consensus 277 Gla~~~~~~~~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~----~---~~~~~~~~~~~~~~l 348 (489)
|+|......... ..-+.++.+.++.+++.|..+|......... ...... . ......++.+-...+
T Consensus 165 g~a~~~~~~~~~-------~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 237 (299)
T 3m2w_A 165 GFAKETTGEKYD-------KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 237 (299)
T ss_dssp TTCEECTTCGGG-------GHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHH
T ss_pred ccccccccccCC-------chhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHH
Confidence 999876543211 0112245588899999998888643221110 000000 0 001123344433333
Q ss_pred HHHHhhhcCCCCCCccHHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~ 370 (489)
. .++..|+..|++..|+..
T Consensus 238 ~---~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 238 R---NLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp H---HHTCSSTTTSCCHHHHHT
T ss_pred H---HHcccChhhCCCHHHHhc
Confidence 3 668889999999999864
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=247.68 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=171.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||+|.+. +++.||+|++..... ..+.+.+|+++++++ +||||+++++++.+....|+|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEE
Confidence 46999999999999999999987 567899999975432 235688999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CGGGCEEECCTTGGGGBCCHH
T ss_pred EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE---cCCCCEEeccccccccccccc
Confidence 9999999999998654 468999999999999999999999999999999999999 667789999999998664322
Q ss_pred ceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 287 TFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 287 ~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
.... ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+-...+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 240 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM 240 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHH
Confidence 1110 001111 111 1234667777776 77766543221100 0000000011112233322222
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-.++..|+..|++..|+.+.|..+
T Consensus 241 ---~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 241 ---NHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp ---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHccCCcccCcCHHHHHHHHHHH
Confidence 256788889999999998888765
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-31 Score=252.08 Aligned_cols=239 Identities=21% Similarity=0.255 Sum_probs=163.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.|++++.||+|+||.||+|++..+ +..||+|++... ......+.+.+|+.+++++ +||||+++++++. .+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cCc
Confidence 45699999999999999999998654 456999988643 3455667899999999999 8999999999985 467
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|+|||||.+++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC-------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEE---CCCCCEEECcccccccc
Confidence 899999999999999997654 68999999999999999999999999999999999999 45678999999999877
Q ss_pred CCCCceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 283 RPGLTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
........ ..+..| ++. -++.+.++.+++. |..+|......+.. .+...........++.+-
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 246 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence 54332211 111112 121 2244677778774 77776543211100 000000001112233333
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...+. .++..|+..|++..|+...|..+
T Consensus 247 ~~li~---~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 247 YSLMT---KCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 33333 56778888889988888877654
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=249.66 Aligned_cols=241 Identities=20% Similarity=0.258 Sum_probs=175.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|++++.||+|+||+||+|.+..+++.||+|++..... .+.+.+|+.+++.+.+|+||+++++++.+....|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 34569999999999999999999999999999999865422 2457789999999978999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeecccccc
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~ 282 (489)
+||||+ +++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+..+ .....+||+|||+|+.+
T Consensus 83 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 999999 999999998654 59999999999999999999999999999999999999432 12234999999999987
Q ss_pred CCCCcee---------eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCC-------c
Q 040003 283 RPGLTFR---------VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPI-------G 332 (489)
Q Consensus 283 ~~~~~~~---------~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~-------~ 332 (489)
....... ...+..| ++. -++.+.++.+++.|..+|......... .+... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 6543211 1122222 121 124478889999998888653221100 00000 0
Q ss_pred chhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.......++.+-...+ -.++..|++.|++.+++...|..+
T Consensus 242 ~~~~~~~~~~~l~~li---~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 242 LRELCAGFPEEFYKYM---HYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHTTTSCHHHHHHH---HHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhhCcHHHHHHH---HHHhcCCcccCCCHHHHHHHHHHH
Confidence 0000112222222222 256778888899999988777553
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=248.90 Aligned_cols=235 Identities=18% Similarity=0.249 Sum_probs=175.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----AVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~ 203 (489)
..|++.+.||+|+||+||+|.+..++..||+|++..... .....+.+.+|+.+|+.+ +||||+++++++.. ...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCce
Confidence 458999999999999999999999999999999976543 455678899999999999 89999999999875 456
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|+|||||++++|.+++...+.+++..+..++.||+.||.|||++| |+||||||+|||+. +..+.+||+|||++..
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGGG
T ss_pred EEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCccc
Confidence 8999999999999999988889999999999999999999999999 99999999999993 1567899999999987
Q ss_pred cCCCCceeeeeeccC--------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CC-CCCcchhhhhhccHHHHH
Q 040003 282 FRPGLTFRVWLRLHF--------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AV-PPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 282 ~~~~~~~~~~~~~~y--------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~ 346 (489)
...........+..| .+ +.++.+.++.+++.|..+|......... .+ ............+.+-..
T Consensus 182 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (290)
T 1t4h_A 182 KRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261 (290)
T ss_dssp CCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred ccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHH
Confidence 655443322222222 11 1134578888999998887642211000 00 000011111222232222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.+. .++..|++.|++..|+.
T Consensus 262 li~---~~l~~dp~~Rps~~ell 281 (290)
T 1t4h_A 262 IIE---GCIRQNKDERYSIKDLL 281 (290)
T ss_dssp HHH---HHSCSSGGGSCCHHHHH
T ss_pred HHH---HHccCChhhCCCHHHHh
Confidence 222 56778888888888764
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=260.86 Aligned_cols=187 Identities=22% Similarity=0.325 Sum_probs=148.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.+.|++++.||+|+||.||+|.+..+|+.||||++.... ......+++.+|+.+|+.+ +||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLD 100 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTT
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccc
Confidence 4467999999999999999999999999999999986532 3455667899999999999 7999999999997653
Q ss_pred ---eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 ---AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.+|+||||| +++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 101 DFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLA 175 (367)
T ss_dssp TCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---cCCCCEEEEeeecc
Confidence 469999999 8899988765 679999999999999999999999999999999999999 67889999999999
Q ss_pred cccCCCCceeeeeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFRVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+........ .+.+..| .-+.++.++++.+++.|...|.+.
T Consensus 176 ~~~~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 176 RQADSEMTG-YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp EECCSSCCS-SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccCc-CcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 876533221 1112222 112235578889999998888754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=272.11 Aligned_cols=240 Identities=19% Similarity=0.218 Sum_probs=179.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.++||+|+||.||+|++..++..||||++..... ..+.+.+|+.+|+++ +|||||++++++.+...+||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEE
Confidence 3569999999999999999999999999999999975432 356789999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||.+|+|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEECCTT
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---CCCCcEEEeecccceeccC
Confidence 99999999999999764 458999999999999999999999999999999999999 6678899999999987754
Q ss_pred CCceee---eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| +| +-++.+.++.+++. |..+|+........ .+...........++.+-.+
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 450 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 450 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 322111 011112 11 12344778888887 77777653321100 00000000111223333333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCC
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGA 377 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~ 377 (489)
.+ -.++..|+..|+++.|+...|..+..
T Consensus 451 li---~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 451 LM---RACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HH---HHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HH---HHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 33 36788899999999999998888743
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=261.52 Aligned_cols=241 Identities=27% Similarity=0.386 Sum_probs=169.4
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC--CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--TTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
.+.+.|++++.||+|+||+||+|++..+++.||+|++.+... ......+.+.+|+.+|+++ +||||+++++++.+..
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCC
Confidence 345679999999999999999999999999999999975432 1234567899999999999 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----------------------------------------CCCCHHHHHHHHHHHHHHH
Q 040003 203 AVHVVMELCAGGELFDRIIQR----------------------------------------GHYTERKAADLTRIIVGVV 242 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----------------------------------------~~~~~~~~~~~~~~i~~~l 242 (489)
..|+|||||+||+|.+++... ..+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999987411 1135677888999999999
Q ss_pred HHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCce------eeeeeccC-----------CC----Ccc
Q 040003 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF------RVWLRLHF-----------LF----FQK 301 (489)
Q Consensus 243 ~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~------~~~~~~~y-----------pf----~~~ 301 (489)
.|||++||+||||||+|||+.. +....+||+|||+|+.+...... ....+..| ++ +.+
T Consensus 182 ~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw 260 (345)
T 3hko_A 182 HYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260 (345)
T ss_dssp HHHHHTTEECCCCCGGGEEESC-SSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred HHHHHCCccccCCChhhEEEec-CCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence 9999999999999999999943 22338999999999876431110 00111111 11 123
Q ss_pred hhHHHHHHHhcccccCCCCCCCCCC--CC-CC-CcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 302 QRQSVLQTRLVRNLNEPGSLWPDKV--AV-PP-IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 302 ~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.+.++.+++.|..+|......... .+ .. .........++.+-.+.+. +++..|++.|++..|+..
T Consensus 261 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLS---NLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHH---HHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHH---HHcCCChhHCCCHHHHhc
Confidence 4577888888888877543211000 00 00 0000011123333333333 567888888898888754
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=250.68 Aligned_cols=238 Identities=21% Similarity=0.240 Sum_probs=172.5
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++.+.||+|+||+||+|++..+++.||+|++...... ......+.+|+.++..+.+||||+++++++.+.+..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT-SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3456799999999999999999999999999999999765433 344567889999999987799999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC--------------
Q 040003 205 HVVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-------------- 266 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-------------- 266 (489)
|+|||||++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+...+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999999765 6799999999999999999999999999999999999995322
Q ss_pred --CCCCeEEEeeccccccCCCCceee--------eeeccCCC----CcchhHHHHHHHhcccccCCCC-CCCCCCCCCCC
Q 040003 267 --EEAPLKTIDFGLSMFFRPGLTFRV--------WLRLHFLF----FQKQRQSVLQTRLVRNLNEPGS-LWPDKVAVPPI 331 (489)
Q Consensus 267 --~~~~~kl~DFGla~~~~~~~~~~~--------~~~~~ypf----~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 331 (489)
....+||+|||++........... ++.+.+.+ +-++.+.++.+++.+...+... .|. .+...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~~~ 243 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH---EIRQG 243 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH---HHHTT
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH---HHHcC
Confidence 455799999999988764433211 11122122 1234467777777665433211 000 00000
Q ss_pred cchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 332 GDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
....+...++.+-.+.+. .++..|+..|++..|+.
T Consensus 244 ~~~~~~~~~~~~~~~li~---~~l~~dp~~Rps~~~ll 278 (289)
T 1x8b_A 244 RLPRIPQVLSQEFTELLK---VMIHPDPERRPSAMALV 278 (289)
T ss_dssp CCCCCSSCCCHHHHHHHH---HHTCSSGGGSCCHHHHH
T ss_pred CCCCCCcccCHHHHHHHH---HHhCCCcccCCCHHHHh
Confidence 001112233443333333 56788888888888864
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=256.14 Aligned_cols=239 Identities=27% Similarity=0.349 Sum_probs=170.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.+.|++.+.||+|+||.||+|++..+++.||||++...... .......+.+|+++|+++ +||||+++++++..
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEES
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcC
Confidence 446799999999999999999999999999999999764321 122334688999999999 89999999999876
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.. .|+|||||.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+....+||+|||+++
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred Cc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 65 89999999999999999888889999999999999999999999999999999999999654445569999999998
Q ss_pred ccCCCCceee-eeeccC------------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CC---CCCcchhhhh
Q 040003 281 FFRPGLTFRV-WLRLHF------------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AV---PPIGDRVIAE 338 (489)
Q Consensus 281 ~~~~~~~~~~-~~~~~y------------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~ 338 (489)
.+........ ..+..| ++. -++.+.++.+++.|..+|......... .+ ..........
T Consensus 166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (322)
T 2ycf_A 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245 (322)
T ss_dssp ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHT
T ss_pred ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhh
Confidence 7754322111 111111 111 134578888999998887643321100 00 0000001111
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.++.+-.+.+. +++..|++.|++..|+.
T Consensus 246 ~~~~~~~~li~---~~l~~dP~~Rps~~~~l 273 (322)
T 2ycf_A 246 EVSEKALDLVK---KLLVVDPKARFTTEEAL 273 (322)
T ss_dssp TSCHHHHHHHH---HHSCSSTTTSCCHHHHH
T ss_pred hcCHHHHHHHH---HHcccCHhhCCCHHHHh
Confidence 23333333333 56788888899888864
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=258.15 Aligned_cols=149 Identities=27% Similarity=0.368 Sum_probs=129.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|++..+++.||+|++..... ......+.+|+.+|+.+ +||||+++++++.+....|+|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEE
Confidence 459999999999999999999999999999999864321 11122455799999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||. |+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~ 151 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKS 151 (324)
T ss_dssp EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---CTTCCEEECSSSEEECC-
T ss_pred ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---CCCCCEEEccCccccccc
Confidence 99997 58988887654 58999999999999999999999999999999999999 677889999999998654
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=248.06 Aligned_cols=236 Identities=17% Similarity=0.225 Sum_probs=167.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|.+. ++..||+|++...... .+.+.+|+++++++ +||||+++++++.+....|+|
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS----EDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC----HHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC----HHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEE
Confidence 45999999999999999999876 6778999999754322 25688999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.+++|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTGGGGBCCHH
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEccccccccccccc
Confidence 999999999999976 4679999999999999999999999999999999999999 677889999999998764322
Q ss_pred ceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 287 TFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 287 ~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
.... ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+-...+
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 254 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 254 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHH
Confidence 1110 000111 111 1234677777776 77766532210000 0000000011112222222222
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-.++..|+..|.+..|+...|..+
T Consensus 255 ---~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 255 ---YSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp ---HHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHccCChhHCcCHHHHHHHHHHH
Confidence 256788888889988888777654
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=254.51 Aligned_cols=241 Identities=21% Similarity=0.273 Sum_probs=176.2
Q ss_pred ccceeecceeccCCceEEEEEEE-----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVE-----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||+||+|.+ ..+++.||+|++... ......+.+.+|+.+++++.+||||+++++++...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC--CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 35699999999999999999985 356789999999654 34556678999999999997799999999998775
Q ss_pred C-eEEEEEeecCCCchHHHHHHcCC----------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 202 V-AVHVVMELCAGGELFDRIIQRGH----------------YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 202 ~-~~~lv~e~~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
+ .+|+|||||.+|+|.+++..... +++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~-- 181 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL-- 181 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE--
Confidence 4 59999999999999999976543 7899999999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+.++.+||+|||+++.+........ ..+..| ++. -++.+.++.+++. |..+|.........
T Consensus 182 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~ 260 (316)
T 2xir_A 182 -SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260 (316)
T ss_dssp -CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred -CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH
Confidence 6678899999999987754433221 112222 121 1244778888886 88777654321100
Q ss_pred --CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 --AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 --~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+............+.+-...+. .++..|+..|++..|+...|..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 261 CRRLKEGTRMRAPDYTTPEMYQTML---DCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccCccCCCCCCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 00000000011223333333332 56788888899999988877654
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=257.20 Aligned_cols=239 Identities=15% Similarity=0.172 Sum_probs=167.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEE----EEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~----avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++.+.||+|+||+||+|++..+++.+ |+|.+... ......+.+.+|+.+|+++ +||||+++++++.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESSS-
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc--cCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCC-
Confidence 46999999999999999999998887765 66665432 2234457889999999999 8999999999998764
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++||||+.+|+|.+++... +.+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTHHHHH
T ss_pred eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE---CCCCCEEEccCcceeEc
Confidence 78999999999999999774 579999999999999999999999999999999999999 55678999999999887
Q ss_pred CCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........ ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHH
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHH
Confidence 54433221 111122 121 2344778888887 88777643221100 00000000011123333
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
-...+ -.++..|+..|.+..|+...|..+.
T Consensus 248 ~~~li---~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 248 VYMIM---VKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHH---HHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred HHHHH---HHHcCCChhhCCCHHHHHHHHHHHH
Confidence 22222 3678889999999999988887653
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=259.32 Aligned_cols=154 Identities=29% Similarity=0.424 Sum_probs=133.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.+.|++++.||+|+||.||+|+++.+++.||||++.... .....+.+.+|+.+|++| +|||||+++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccch
Confidence 3456999999999999999999999999999999997543 334567899999999999 8999999999986543
Q ss_pred ------------------------------------------------------eEEEEEeecCCCchHHHHHHcCC---
Q 040003 203 ------------------------------------------------------AVHVVMELCAGGELFDRIIQRGH--- 225 (489)
Q Consensus 203 ------------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--- 225 (489)
.+|+|||||++++|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 38999999999999999976543
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 226 YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 226 ~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
..+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~ 217 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQD 217 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEEeecCcccccccc
Confidence 4556688999999999999999999999999999999 67789999999999987654
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=259.82 Aligned_cols=240 Identities=15% Similarity=0.185 Sum_probs=173.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcE----EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKE----FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++++.||+|+||+||+|++..+++. ||+|.+.... .......+.+|+.+++++ +||||+++++++. ...
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCc
Confidence 4699999999999999999999888876 6666664322 122234567899999999 8999999999886 457
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++|||||.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGGS
T ss_pred cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCccccc
Confidence 89999999999999998764 578999999999999999999999999999999999999 67788999999999987
Q ss_pred CCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........ ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID 245 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTT
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHH
Confidence 54432211 111122 111 1344778888887 88887654321110 00000000001112222
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA 377 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~ 377 (489)
-...+ -+++..|+..|++..|+...|..+..
T Consensus 246 ~~~li---~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 246 VYMVM---VKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTHHH---HHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred HHHHH---HHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 22222 25688899999999999999888743
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=248.79 Aligned_cols=240 Identities=20% Similarity=0.222 Sum_probs=163.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC-HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT-EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+.|++.+.||+|+||.||+|.+. ++.||+|++....... ....+.+.+|+.+++.+ +||||+++++++.+....|+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEE
Confidence 45999999999999999999874 7899999986543222 23356789999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEeeeeCC-----CCCCeEEEeecc
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG---VMHRDLKPENFLFINQQ-----EEAPLKTIDFGL 278 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---iiHrDlKp~Nill~~~~-----~~~~~kl~DFGl 278 (489)
|||||.+++|.+++. .+.+++..+..++.|++.||.|||++| |+||||||+|||+.... ..+.+||+|||+
T Consensus 84 v~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999999988774 568999999999999999999999999 99999999999994321 267899999999
Q ss_pred ccccCCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHH
Q 040003 279 SMFFRPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 279 a~~~~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 343 (489)
+..+..........+..| ++. -++.+.++.+++.|..+|......... ..............+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (271)
T 3dtc_A 163 AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEP 242 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHH
T ss_pred ccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHH
Confidence 987655443333333233 111 234477888888888777643210000 00000000111223333
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-.+.+. .++..|+..|++..|+.+.|..
T Consensus 243 ~~~li~---~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 243 FAKLME---DCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp HHHHHH---HHTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHHHH---HHhcCCcccCcCHHHHHHHHhc
Confidence 222333 5678888999999999888764
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=262.56 Aligned_cols=190 Identities=21% Similarity=0.299 Sum_probs=152.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--eE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--AV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~~ 204 (489)
.+.|++.++||+|+||+||+|++..+++.||||++..... ....+.+.+|+++|+++ +||||+++++++.+.. ..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCee
Confidence 4569999999999999999999999999999999975432 22346778999999999 7999999999998765 78
Q ss_pred EEEEeecCCCchHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee-CCCCCCeEEEeecccc
Q 040003 205 HVVMELCAGGELFDRIIQRGH---YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN-QQEEAPLKTIDFGLSM 280 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~-~~~~~~~kl~DFGla~ 280 (489)
|+|||||.+|+|.+++..... +++..+..++.||+.||.|||++|||||||||+|||+.. .+..+.+||+|||+|+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999999865432 899999999999999999999999999999999999743 2445679999999998
Q ss_pred ccCCCCceee-eeeccC---------------------CCCcchhHHHHHHHhcccccCCC
Q 040003 281 FFRPGLTFRV-WLRLHF---------------------LFFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 281 ~~~~~~~~~~-~~~~~y---------------------pf~~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+........ ..+..| .-+-++.+.++.+++.|..+|..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 8755433221 112222 01123446788888888887753
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=255.46 Aligned_cols=240 Identities=20% Similarity=0.254 Sum_probs=174.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc-----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK-----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|++++.||+|+||.||+|.+..+++ .||+|.+... ......+.+.+|+.+|+.+.+||||+++++++.+.+
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc--cChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 569999999999999999999987664 7999998653 245566789999999999967999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQR--------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
.+|+|||||.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL---TNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE---EGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE---CCC
Confidence 999999999999999998653 357899999999999999999999999999999999999 556
Q ss_pred CCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC--CC
Q 040003 269 APLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV--AV 328 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~--~~ 328 (489)
+.+||+|||+++.+........ ..+..| ++. -.+.+.++.+++. |..+|......... .+
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 280 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence 7899999999987654332211 111122 111 1244778888886 77777653321100 00
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
............+.+-...+ -.++..|++.|++..|+...|..+
T Consensus 281 ~~~~~~~~~~~~~~~l~~li---~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 281 KDGYQMAQPAFAPKNIYSIM---QACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHTCCCCCCTTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCHHHHHHH---HHHhccChhhCcCHHHHHHHHHHH
Confidence 00000000111222222222 256778888888888888777654
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=256.59 Aligned_cols=153 Identities=28% Similarity=0.408 Sum_probs=128.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC--HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT--EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.|++++.||+|+||.||+|++..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++.+....
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCC
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCce
Confidence 456999999999999999999999999999999987543221 11124678999999999 799999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||.+ +|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---cCCCCEEEEecccceecc
Confidence 999999976 888887654 368899999999999999999999999999999999999 677899999999998764
Q ss_pred C
Q 040003 284 P 284 (489)
Q Consensus 284 ~ 284 (489)
.
T Consensus 164 ~ 164 (346)
T 1ua2_A 164 S 164 (346)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=255.04 Aligned_cols=152 Identities=28% Similarity=0.475 Sum_probs=127.6
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--e
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--A 203 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~ 203 (489)
+.++|++++.||+|+||+||+|.+..+++.||||++.+. .......+++.+|+.+|+++.+||||+++++++...+ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 346799999999999999999999999999999998653 3455667788999999999956999999999997544 7
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+|||||. ++|..++.. +.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEESS
T ss_pred EEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCccccccc
Confidence 999999997 589887765 579999999999999999999999999999999999999 778899999999998764
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-30 Score=250.45 Aligned_cols=232 Identities=22% Similarity=0.237 Sum_probs=170.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
..|...+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+|+.+ +||||+++++++......|+|
T Consensus 45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 120 (321)
T 2c30_A 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVL 120 (321)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEE
Confidence 348888899999999999999999999999999975432 2346788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+|++|.+++. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 121 ~e~~~~~~L~~~l~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~ 196 (321)
T 2c30_A 121 MEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVP 196 (321)
T ss_dssp ECCCCSCBHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSC
T ss_pred EecCCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCcEEEeeeeeeeecccCcc
Confidence 99999999999775 4579999999999999999999999999999999999999 6778899999999987754322
Q ss_pred eee--eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCC--CCcchhhhhhccHHHHHHHH
Q 040003 288 FRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVP--PIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 288 ~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~l~ 349 (489)
... ..+..| ++. -++.+.++.+++.|..+|......... .+. ..........++.+-.+.+.
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 276 (321)
T 2c30_A 197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276 (321)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHH
T ss_pred ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHH
Confidence 111 222222 111 234577888888888777543210000 000 00000001123333223333
Q ss_pred HHHhhhcCCCCCCccHHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~ 370 (489)
+++..|+..|++..|+..
T Consensus 277 ---~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 277 ---RMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHSCSSTTTSCCHHHHHT
T ss_pred ---HHccCChhhCcCHHHHhc
Confidence 567788888888888754
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=251.70 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=172.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----e
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV----A 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----~ 203 (489)
+.|+++++||+|+||+||+|++. ++.||||++... ........+|+.+|+++ +|||||++++++.+.. .
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG----GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecC----chHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCce
Confidence 45999999999999999999875 789999998643 23344566799999999 7999999999998744 4
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL----------GVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~----------~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
+|+|||||++|+|.+++.. +.+++..+..++.|++.||.|||+. |||||||||+|||+ +.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeEEE
Confidence 7999999999999999865 4699999999999999999999999 99999999999999 67789999
Q ss_pred EeeccccccCCCCceee----eeeccC--------------C----CCcchhHHHHHHHhcccccCCCCCCCCCCCC---
Q 040003 274 IDFGLSMFFRPGLTFRV----WLRLHF--------------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAV--- 328 (489)
Q Consensus 274 ~DFGla~~~~~~~~~~~----~~~~~y--------------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--- 328 (489)
+|||+|+.+........ ..+..| + .+-++.+.++.+++.|..+|...........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 99999987754432211 222222 0 1234557899999999988875432111000
Q ss_pred ---------------CCCcchhhhhhcc-HHHHHHHH-HHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 329 ---------------PPIGDRVIAESLS-EEEIAGLK-EMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 329 ---------------~~~~~~~~~~~~~-~~~~~~l~-~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.......+..... ......+. -+-+++..|+..|++..|+...|..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000000000000 01111122 23367888888999999988887665
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=252.47 Aligned_cols=188 Identities=20% Similarity=0.271 Sum_probs=152.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|++..+++.||+|++.... ......+.+.+|+.+++++ +||||+++++++.+....|+|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEE
Confidence 56999999999999999999999999999999986543 3445566788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCCCceeecCCcc
Confidence 9999999998887777889999999999999999999999999999999999999 6778999999999987643322
Q ss_pred eee--eeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 288 FRV--WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 288 ~~~--~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
... ..+..| ++ +.++.+.++.+++.|...|...
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 111 111112 12 1234578888888888777643
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=275.87 Aligned_cols=237 Identities=19% Similarity=0.228 Sum_probs=168.1
Q ss_pred ceeecc-eeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 129 MYSLGR-KLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 129 ~y~~~~-~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
.+.+.+ +||+|+||.||+|.++. ++..||||+++... .....+.+.+|+++|+++ +|||||++++++.. ..+|
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeE
Confidence 355555 89999999999998763 55679999997542 233567899999999999 89999999999976 5699
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||||.+|+|.+++... +.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 412 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl---~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL---VNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCSTTTTCC-
T ss_pred EEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE---cCCCcEEEeeccCcccccC
Confidence 999999999999998654 469999999999999999999999999999999999999 5567899999999998754
Q ss_pred CCceee-----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 285 GLTFRV-----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 285 ~~~~~~-----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
...... ..+..| .|. -++.+.++.+++. |..+|......... .+..-.........+.+-
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l 568 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPEL 568 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHH
Confidence 332111 111112 121 1244778888886 88887653321100 000000001112233332
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+.+ -.++..|+..|.+..++...|..+
T Consensus 569 ~~li---~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 569 YALM---SDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHH---HHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHH---HHHcCCChhHCcCHHHHHHHHHHH
Confidence 2222 367888899999999988777553
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=250.59 Aligned_cols=152 Identities=28% Similarity=0.421 Sum_probs=131.7
Q ss_pred ccceeecceeccCCceEEEEEE----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCV----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-- 200 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 200 (489)
.+.|+++++||+|+||+||+|+ +..+++.||+|++.. ......+.+.+|+++|+++ +||||+++++++..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 84 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAG 84 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC---CCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc---CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence 3569999999999999999998 567899999999864 3456677899999999999 79999999999854
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...+|+|||||++|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT 161 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCCSC
T ss_pred CCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE---cCCCeEEEccCccc
Confidence 456899999999999999997754 59999999999999999999999999999999999999 55678999999999
Q ss_pred cccCCC
Q 040003 280 MFFRPG 285 (489)
Q Consensus 280 ~~~~~~ 285 (489)
+.+...
T Consensus 162 ~~~~~~ 167 (295)
T 3ugc_A 162 KVLPQD 167 (295)
T ss_dssp C-----
T ss_pred ccccCC
Confidence 887544
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=263.27 Aligned_cols=190 Identities=26% Similarity=0.383 Sum_probs=154.3
Q ss_pred cceeecceeccCCceEEEEEEEc---CCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK---ATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++++.||+|+||+||+|++. .+++.||||++.+.... .....+.+.+|+++|+++.+||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 56999999999999999999984 58999999998653211 112234567899999999779999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|||||||.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeecc
Confidence 99999999999999999888899999999999999999999999999999999999999 778899999999998764
Q ss_pred CCCcee---eeeeccC-----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 284 PGLTFR---VWLRLHF-----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 284 ~~~~~~---~~~~~~y-----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...... ...+..| .+ +-++.+.++.+++.|..+|...
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 322111 1112222 11 1234578899999998888643
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=249.03 Aligned_cols=240 Identities=19% Similarity=0.218 Sum_probs=174.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHH----HHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDV----EDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~----~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|++.+.||+|+||+||+|++..+++.||+|++........... +.+.+|+.+++++ +||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT-
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC-
Confidence 469999999999999999999999999999999876543332222 6789999999999 7999999999997665
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCC--CCCCeEEEeecc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQ--EEAPLKTIDFGL 278 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~--~~~~~kl~DFGl 278 (489)
++||||+.+|+|.+++... ..+++..+..++.|++.||.|||++| |+||||||+|||+...+ ....+||+|||+
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 6999999999999988655 46999999999999999999999999 99999999999994321 122399999999
Q ss_pred ccccCCCCceeeeeeccC-----------CC----CcchhHHHHHHHhcccccCCCCCCCCCCCC----CCCcchhhhhh
Q 040003 279 SMFFRPGLTFRVWLRLHF-----------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAV----PPIGDRVIAES 339 (489)
Q Consensus 279 a~~~~~~~~~~~~~~~~y-----------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 339 (489)
|+....... ....+..| ++ +-++.+.++.+++.|..+|........... .......+...
T Consensus 176 ~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 4f0f_A 176 SQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPED 254 (287)
T ss_dssp CBCCSSCEE-CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTT
T ss_pred ccccccccc-ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcc
Confidence 986543211 11111122 11 123457889999999888865433211000 00000111223
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
++.+-.+.+. .++..|+..|++.+|+.+.|.+
T Consensus 255 ~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 255 CPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp SCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHT
T ss_pred cCHHHHHHHH---HHhcCChhhCcCHHHHHHHHHh
Confidence 3333333333 5678888999999999888765
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=264.36 Aligned_cols=234 Identities=21% Similarity=0.237 Sum_probs=172.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-eEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-AVH 205 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~ 205 (489)
.+.|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|+.+|+++ +|||||++++++.+.. .+|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceE
Confidence 356999999999999999999875 6799999996532 346789999999999 8999999999987665 799
Q ss_pred EEEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 206 VVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||||.+|+|.+++...+. +++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+++...
T Consensus 264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCCCccccc
Confidence 99999999999999987654 7899999999999999999999999999999999999 677899999999998654
Q ss_pred CCCceeeeeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 284 PGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 284 ~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
...... ..+..| .|. -++.+.++.+++. |..+|+........ .+..-.........+.+-.+.+
T Consensus 341 ~~~~~~-~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li 419 (450)
T 1k9a_A 341 STQDTG-KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVM 419 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccccCC-CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHH
Confidence 322111 111112 122 1244778888887 88888754322211 0000000011122333333333
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. +++..|+..|.+..|+...|..+
T Consensus 420 ~---~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 420 K---NCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp H---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H---HHcCCChhHCcCHHHHHHHHHHH
Confidence 3 57788888999999998877654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=249.35 Aligned_cols=239 Identities=16% Similarity=0.186 Sum_probs=166.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCC----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
..|++.+.||+|+||+||+|.+..++ ..||+|++... ........+.+|+.+++.+ +||||+++++++.+...
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG--YTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC--CCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCC
Confidence 45999999999999999999987653 35999998643 2455667899999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|||||||.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC----
T ss_pred cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE---CCCCcEEECCCCcchhh
Confidence 99999999999999999765 579999999999999999999999999999999999999 67789999999999877
Q ss_pred CCCCceee-----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccH
Q 040003 283 RPGLTFRV-----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSE 342 (489)
Q Consensus 283 ~~~~~~~~-----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 342 (489)
........ ..+..| ++. -++.+.++.+++. |..+|......... .+............+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS 277 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBH
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCH
Confidence 54322111 111112 111 1234677777776 77766432210000 0000000000112333
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-...+ -.++..|+..|.+..|+...|..+
T Consensus 278 ~l~~li---~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 278 AIYQLM---MQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp HHHHHH---HHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHH---HHHcCCChhhCcCHHHHHHHHHHH
Confidence 322222 256788888889888888777654
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=245.21 Aligned_cols=239 Identities=18% Similarity=0.186 Sum_probs=172.8
Q ss_pred cceeecc-eeccCCceEEEEEEE--cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGR-KLGQGQFGTTFLCVE--KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~-~lG~G~fg~Vy~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|.+.+ .||+|+||+||+|.+ ..+++.||+|++.... ......+.+.+|+.+++.+ +||||+++++++ .....
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCc
Confidence 4599988 999999999999954 5677899999997543 2334467899999999999 899999999999 56788
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|+||||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCT
T ss_pred EEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEE---eCCCcEEEccCCcceeecc
Confidence 9999999999999999888889999999999999999999999999999999999999 4567899999999988765
Q ss_pred CCceeee-----eeccC---------C----CCcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 285 GLTFRVW-----LRLHF---------L----FFQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 285 ~~~~~~~-----~~~~y---------p----f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
....... .+..| + -+-++.+.++.+++. |..+|......... .+...........++.+-
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 249 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM 249 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence 4433220 01112 1 111244677888887 87777543211000 000000000112233333
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...+. .++..|++.|.+..|+...|+.+
T Consensus 250 ~~li~---~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 250 YDLMN---LCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHH---HHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 33333 56788888899999988877665
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=252.02 Aligned_cols=241 Identities=17% Similarity=0.215 Sum_probs=178.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||+||+|++. +++.||+|++... .....+.+.+|+.+|+.+ +||||+++++++.+.+..|+
T Consensus 38 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 38 TNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPE---SSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSC---CSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEE
T ss_pred HhccCccceeecCCCeeEEEEEEC-CCCEEEEEEeccc---ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEE
Confidence 356999999999999999999964 6889999988653 234567889999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 207 VMELCAGGELFDRIIQRG----HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
|||||++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeeccccccc
Confidence 999999999999885442 48899999999999999999999999999999999999 77889999999999875
Q ss_pred CCCCcee----eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-------------CCCCCc
Q 040003 283 RPGLTFR----VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-------------AVPPIG 332 (489)
Q Consensus 283 ~~~~~~~----~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~ 332 (489)
....... ...+..| ++. -++.+.++.+++.|..+|......... .+....
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSS
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhc
Confidence 4322111 1222223 121 134578899999998887643321110 011111
Q ss_pred chhhhhhccHHHHHHHHHH-HhhhcCCCCCCccHHHHHHHHHHh
Q 040003 333 DRVIAESLSEEEIAGLKEM-FKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~~-F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.......+..+....+.++ -+++..|+..|++..|+...|..+
T Consensus 270 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1111222333333334333 367888999999999988777653
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=259.48 Aligned_cols=187 Identities=20% Similarity=0.273 Sum_probs=155.8
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||+||+|.+..+++.||+|++... ......+.+.+|+.+|+.+ +||||+++++++.+.+..|+
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC--CCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc--cCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEE
Confidence 45699999999999999999999999999999999754 2455667899999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||.|++|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 109 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHHH
T ss_pred EEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE---CCCCCEEEEECCCCcccccc
Confidence 999999999999998888999999999999999999999996 99999999999999 67788999999999765322
Q ss_pred CceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 286 LTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
.......+..| ++. -++.+.++.+++.|..+|+.
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 22111222222 111 12446788888888877764
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=250.54 Aligned_cols=239 Identities=19% Similarity=0.273 Sum_probs=169.7
Q ss_pred cceeecceeccCCceEEEEEE----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--
Q 040003 128 EMYSLGRKLGQGQFGTTFLCV----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-- 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-- 201 (489)
+.|++++.||+|+||.||+|+ +..+++.||+|++.... .....+.+.+|+++|+.+ +||||+++++++.+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCC
Confidence 459999999999999999998 56789999999997543 233457789999999999 799999999999876
Q ss_pred CeEEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..+|+|||||.+|+|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTK 174 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCE
T ss_pred ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE---cCCCCEEECcccccc
Confidence 678999999999999999954 4579999999999999999999999999999999999999 556789999999999
Q ss_pred ccCCCCceeee-----eeccC-------------CCCcchhHHHHHHHhcccccCCCCC---------CCCCCC------
Q 040003 281 FFRPGLTFRVW-----LRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSL---------WPDKVA------ 327 (489)
Q Consensus 281 ~~~~~~~~~~~-----~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~------ 327 (489)
.+......... .+..| .-+-++.+.++.+++.|..++.... +.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 87655432221 11112 1112345778888888766543210 000000
Q ss_pred -CCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 328 -VPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 328 -~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+...........++.+-.+.+. +++..|+..|++..|+.+.|.++
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 255 TLKEGKRLPCPPNCPDEVYQLMR---KCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhccCCCCCCCCCCHHHHHHHH---HHcCCCCCCCCCHHHHHHHHHHH
Confidence 0000000011122332222222 56778888888888888877654
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=252.38 Aligned_cols=245 Identities=20% Similarity=0.172 Sum_probs=176.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE----eCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE----DAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~~ 203 (489)
+.|++++.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.+ +||||+++++++. ....
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCce
Confidence 5699999999999999999999999999999998653 456677899999999999 8999999999986 3457
Q ss_pred EEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 204 VHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.|+|||||.+|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCCCCEEEEecCcc
Confidence 8999999999999999875 3679999999999999999999999999999999999999 67788999999998
Q ss_pred cccCCCCcee-----------eeeeccC----------------CCCcchhHHHHHHHhcccccCCCCCCCCCC---CCC
Q 040003 280 MFFRPGLTFR-----------VWLRLHF----------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVP 329 (489)
Q Consensus 280 ~~~~~~~~~~-----------~~~~~~y----------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~ 329 (489)
.......... ...+..| .-+-++.+.++.+++.|..+|......... .+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 261 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh
Confidence 7653211000 0001111 111234478888999888776421100000 000
Q ss_pred CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHH
Q 040003 330 PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDS 382 (489)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~ 382 (489)
..........++.+-...+. .++..|++.|++..|+...|..+.......
T Consensus 262 ~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 262 NQLSIPQSPRHSSALWQLLN---SMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp CC--CCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred ccCCCCccccCCHHHHHHHH---HHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 00000001123333333333 568889999999999999998886554433
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=255.50 Aligned_cols=240 Identities=18% Similarity=0.210 Sum_probs=170.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEE--EEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEF--ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~--avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.|++.+.||+|+||.||+|++..++..+ |+|.+... ......+.+.+|+++|+++.+||||+++++++.+.+..|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 45999999999999999999999888865 99988643 233455678999999999977999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC
Q 040003 206 VVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~ 269 (489)
+|||||++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE---cCCC
Confidence 9999999999999997654 68999999999999999999999999999999999999 6677
Q ss_pred CeEEEeeccccccCCCCcee-eeeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcc
Q 040003 270 PLKTIDFGLSMFFRPGLTFR-VWLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGD 333 (489)
Q Consensus 270 ~~kl~DFGla~~~~~~~~~~-~~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~ 333 (489)
.+||+|||+++......... ...+..| ++ +-++.+.++.+++. |..+|......... .+.....
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 89999999997432211100 0111112 11 11244677888886 77776543221100 0000000
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
......++.+-.+.+. .++..|++.|++..|+...|..+
T Consensus 260 ~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 260 LEKPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp CCCCTTBCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 0011223333333333 56778888889988887777654
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-30 Score=257.02 Aligned_cols=233 Identities=19% Similarity=0.257 Sum_probs=168.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG-HPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~~~~~l 206 (489)
..|++++.||+|+||+||+|.+.. ++.||||++..... .....+.+.+|+.+|++|.+ |||||++++++.....+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 359999999999999999998765 89999999976543 45667889999999999953 6999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||| |.+++|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||+ + ++.+||+|||+|+.+....
T Consensus 134 v~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI---V-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE---S-SSCEEECCCSSSCCC----
T ss_pred EEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---E-CCeEEEEecCccccccCCC
Confidence 999 5688999999988889999999999999999999999999999999999999 3 3679999999998775433
Q ss_pred cee----eeeeccC--------------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchh
Q 040003 287 TFR----VWLRLHF--------------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRV 335 (489)
Q Consensus 287 ~~~----~~~~~~y--------------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~ 335 (489)
... .+.+..| ++ +-++.+.++.+++.|..+|....-.... .+.......
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC
Confidence 211 1122222 11 1234578889999998887542210000 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.....+.+-.+.+. .++..|++.|++..|+..
T Consensus 289 ~~~~~~~~~~~li~---~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 289 FPDIPEKDLQDVLK---CCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CCCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CCccchHHHHHHHH---HHcccChhhCCCHHHHhh
Confidence 01111222222222 567888888999888753
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=254.39 Aligned_cols=243 Identities=17% Similarity=0.207 Sum_probs=169.2
Q ss_pred ccceeecceeccCCceEEEEEE-----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCV-----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||.||+|+ +..+++.||+|++... ........+.+|+.+++++ +||||+++++++.+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQS 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCC
Confidence 4569999999999999999998 5567889999998643 3455667889999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG-------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
...|+|||||++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+...+....+||+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999999998653 48899999999999999999999999999999999999544456679999
Q ss_pred eeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchh
Q 040003 275 DFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRV 335 (489)
Q Consensus 275 DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~ 335 (489)
|||+++.......... ..+..| ++. -++.+.++.+++. |..+|......... .+.......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC
Confidence 9999986543322111 111112 111 1244677888886 77766543211000 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
....++..-...+ -.++..|+..|++..|+...|..+
T Consensus 266 ~~~~~~~~l~~li---~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 266 PPKNCPGPVYRIM---TQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp CCTTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHH---HHHhcCChhhCcCHHHHHHHHHHH
Confidence 1112333222222 256777888888888887776554
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=252.53 Aligned_cols=189 Identities=20% Similarity=0.294 Sum_probs=151.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc----CCCCeeEEEEEEEe
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA----GHPNVIQIVGAYED 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~~~~~~ 200 (489)
.+.+.|+++++||+|+||+||+|++..+++.||||++.. .......+.+|+.+++.+. +||||+++++++..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN----IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc----chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 345679999999999999999999999999999999863 2345567788999999994 39999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-------------
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ------------- 265 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~------------- 265 (489)
.+..|+||||| +++|.+++.... .+++..+..++.||+.||.|||++|||||||||+|||+...
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence 99999999999 899999997654 48999999999999999999999999999999999999431
Q ss_pred ---------CCCCCeEEEeeccccccCCCCceeeeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 266 ---------QEEAPLKTIDFGLSMFFRPGLTFRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 266 ---------~~~~~~kl~DFGla~~~~~~~~~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
...+.+||+|||+|+........ .+.+..| ++ +.++.++++.+++.|..+|..
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYHGS-IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSCCCS-CCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccCCCCEEEEeccCceecCCCCcC-ccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 12678999999999865432211 1111112 11 123456777788888777754
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=256.08 Aligned_cols=190 Identities=16% Similarity=0.191 Sum_probs=142.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCC-----CcEEEEEEeecccCCCHHHH--------HHHHHHHHHHHHhcCCCCeeE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT-----QKEFACKSIAKRKLTTEEDV--------EDVRREIRIMHHLAGHPNVIQ 193 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----~~~~avK~i~~~~~~~~~~~--------~~~~~E~~~l~~l~~hpniv~ 193 (489)
.+.|++++.||+|+||+||+|.+..+ ++.||||++.........+. ..+..|+..++.+ +||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~ 112 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGVPK 112 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCSCC
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCCCe
Confidence 34699999999999999999998765 58899999865421000000 1223344455555 5999999
Q ss_pred EEEEEEeC----CeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC
Q 040003 194 IVGAYEDA----VAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268 (489)
Q Consensus 194 ~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~ 268 (489)
+++++... ...||||||| |++|.+++... +.+++..+..++.||+.||.|||++|||||||||+|||+.. +..
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~~ 190 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNP 190 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-SCT
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-CCC
Confidence 99998764 5689999999 99999999776 67999999999999999999999999999999999999942 256
Q ss_pred CCeEEEeeccccccCCCCcee---------eeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 269 APLKTIDFGLSMFFRPGLTFR---------VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~---------~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
+.+||+|||+|+.+....... ...+..| ++. -++.+.++.+++.|..+|..
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 889999999998765332111 0122223 121 23457889999999988874
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-30 Score=254.34 Aligned_cols=150 Identities=25% Similarity=0.407 Sum_probs=131.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED------- 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 200 (489)
+.|+++++||+|+||+||+|++..+++.||+|++...... ......+.+|+.+|+.+ +||||+++++++..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhc-cCCCcccHhheeecccccccc
Confidence 5699999999999999999999999999999998654322 22335677999999999 79999999999977
Q ss_pred -CCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
.+.+|+|||||.+ +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGL 170 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTT
T ss_pred CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEEEccchh
Confidence 4578999999975 777777654 579999999999999999999999999999999999999 7778999999999
Q ss_pred ccccC
Q 040003 279 SMFFR 283 (489)
Q Consensus 279 a~~~~ 283 (489)
|+.+.
T Consensus 171 a~~~~ 175 (351)
T 3mi9_A 171 ARAFS 175 (351)
T ss_dssp CEECC
T ss_pred ccccc
Confidence 98764
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=245.72 Aligned_cols=234 Identities=28% Similarity=0.373 Sum_probs=175.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++++.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+.+++.+ +||||+++++++.+....|+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEE
Confidence 3569999999999999999999999999999999975543 23457789999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEETT
T ss_pred EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE---ccCCCEEEeeCCCccccCCCc
Confidence 99999999999988777789999999999999999999999999999999999999 677889999999998764322
Q ss_pred cee----eeeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCC--CC-CCCcchhhhhhccHHHH
Q 040003 287 TFR----VWLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AV-PPIGDRVIAESLSEEEI 345 (489)
Q Consensus 287 ~~~----~~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~ 345 (489)
... ...+..| ++ +-++.+.++.+++.|..+|......... .+ ...........++.+-.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHH
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHH
Confidence 111 0111112 11 1134477889999998888653221100 00 00000001122333333
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+.+. .++..|++.|++.+|+.
T Consensus 240 ~li~---~~l~~~p~~Rps~~~il 260 (276)
T 2yex_A 240 ALLH---KILVENPSARITIPDIK 260 (276)
T ss_dssp HHHH---HHSCSSTTTSCCHHHHT
T ss_pred HHHH---HHCCCCchhCCCHHHHh
Confidence 3333 56778888888888764
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-30 Score=246.17 Aligned_cols=242 Identities=21% Similarity=0.213 Sum_probs=165.7
Q ss_pred cceeecceeccCCceEEEEEEEcC-CCc--EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-TQK--EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~--~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++++.||+|+||+||+|.+.. +++ .||+|++...........+.+.+|+++++++ +||||+++++++.+.. .
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-C
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-c
Confidence 469999999999999999998653 333 6899998765544456678899999999999 7999999999998765 8
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++||||+.+++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---cCCCCEEEcccccccccc
Confidence 9999999999999998764 579999999999999999999999999999999999999 456789999999998876
Q ss_pred CCCceee-----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CC-CCCcchhhhhhccH
Q 040003 284 PGLTFRV-----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV-PPIGDRVIAESLSE 342 (489)
Q Consensus 284 ~~~~~~~-----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 342 (489)
....... ..+..| ++ +-++.+.++.+++. |..+|......... .+ ...........++.
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 252 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCH
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCH
Confidence 5433211 111112 11 11234667777877 77776543210000 00 00000001122333
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA 377 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~ 377 (489)
+-.+.+. .++..|+..|++..++...|..+..
T Consensus 253 ~l~~li~---~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 253 DIYNVMV---QCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHHH---HHccCCcccCcCHHHHHHHHHHhCc
Confidence 3333333 5678888999999999998887653
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=248.38 Aligned_cols=240 Identities=18% Similarity=0.209 Sum_probs=173.1
Q ss_pred ccceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++.+.||+|+||.||+|.+. .+++.||+|++... ........+.+|+.+|+.+ +||||+++++++.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG 100 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT--SCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSS
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc--cCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccC
Confidence 456999999999999999999876 46788999998643 3445567789999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 202 VAVHVVMELCAGGELFDRIIQR----------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
...|+|||||.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli---~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE---cCCCeE
Confidence 9999999999999999998653 356889999999999999999999999999999999999 677899
Q ss_pred EEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCc
Q 040003 272 KTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIG 332 (489)
Q Consensus 272 kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~ 332 (489)
||+|||+++.......... ..+..| ++. -++.+.++.+++. |..+|......... .+....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 257 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC
Confidence 9999999987644322211 111122 111 1234677777776 66665432110000 000000
Q ss_pred chhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
........+.+-...+. .++..|+..|++..|+...|+..
T Consensus 258 ~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 258 LLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp CCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHGGG
T ss_pred cCCCCCCCCHHHHHHHH---HHcCCCcccCcCHHHHHHHHHHh
Confidence 00011122332222222 56778888888888888877665
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=245.49 Aligned_cols=150 Identities=27% Similarity=0.406 Sum_probs=131.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++++ +||||+++++++.+.+..|+|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEE
Confidence 459999999999999999999999999999999865432 222346788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFG 154 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECSTTHHHHHC
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEE---cCCCCEEECcchhhhhcc
Confidence 99997 6999988765 468999999999999999999999999999999999999 677899999999998764
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=252.04 Aligned_cols=244 Identities=16% Similarity=0.152 Sum_probs=180.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||+||+|++ .+++.||+|++..... ......+.+|+.+++.+ +||||+++++++.+....++
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 104 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLL 104 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTC-CCTTBCCCCEEECCSSCCEE
T ss_pred hhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccC--chHHHHHHHHHHHHHhc-cCCCccceEEEEecCCceEE
Confidence 35699999999999999999985 4688999999875432 12223688999999999 79999999999999999999
Q ss_pred EEeecCCCchHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 207 VMELCAGGELFDRIIQRG----HYTERKAADLTRIIVGVVEACHSL---GVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
|||||.+|+|.+++.... .+++..+..++.|++.||.|||++ ||+||||||+|||+ +.++.+||+|||++
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~~ 181 (326)
T 3uim_A 105 VYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLA 181 (326)
T ss_dssp EEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCEEECCCSSC
T ss_pred EEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCEEeccCccc
Confidence 999999999999997643 389999999999999999999999 99999999999999 67789999999999
Q ss_pred cccCCCCceee---eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCC---------------CCCCC
Q 040003 280 MFFRPGLTFRV---WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWP---------------DKVAV 328 (489)
Q Consensus 280 ~~~~~~~~~~~---~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~---------------~~~~~ 328 (489)
+.+........ ..+..| ++ +-++.+.++.+++.|..+|...... ....+
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (326)
T 3uim_A 182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261 (326)
T ss_dssp EECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCS
T ss_pred cccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhh
Confidence 87754332211 122222 11 1234578899999998888521000 00011
Q ss_pred CCCcchhhhhhccHHHHHHHHHH-HhhhcCCCCCCccHHHHHHHHHHhCC
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEM-FKMIDTDNSGYITLEELKKGLQRVGA 377 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~-F~~~D~d~~g~i~~~el~~~l~~lg~ 377 (489)
..............+....+.++ ..++..|+..|+++.|+...|...+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp TTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred hhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 11111122223344444444433 46889999999999999999987654
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=247.44 Aligned_cols=242 Identities=14% Similarity=0.121 Sum_probs=170.1
Q ss_pred ccceeecceeccCCceEEEEEEEcCCC-------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQ-------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE 199 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 199 (489)
.+.|++.+.||+|+||+||+|++..++ ..||+|++.... ....+.+.+|+.+|+++ +||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKL-SHKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTS-CCTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEE
Confidence 356999999999999999999998877 479999986532 34457889999999999 7999999999999
Q ss_pred eCCeEEEEEeecCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC-----CCCeEE
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-----EAPLKT 273 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-----~~~~kl 273 (489)
+....|+|||||.+|+|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||+..+.. .+.+||
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999999977654 999999999999999999999999999999999999954321 112999
Q ss_pred EeeccccccCCCCceee--------eee--ccC--CCCcchhHHHHHHHhccccc-CCCCCCCCCCCCCCCcchhhhhhc
Q 040003 274 IDFGLSMFFRPGLTFRV--------WLR--LHF--LFFQKQRQSVLQTRLVRNLN-EPGSLWPDKVAVPPIGDRVIAESL 340 (489)
Q Consensus 274 ~DFGla~~~~~~~~~~~--------~~~--~~y--pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 340 (489)
+|||++........... ++. ..| .-+-++.+.++.+++.|... +............. .........
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 241 (289)
T 4fvq_A 163 SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQLPAPK 241 (289)
T ss_dssp CCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCS
T ss_pred ccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh-ccCCCCCCC
Confidence 99999976643221110 111 111 11123447788888875332 22111000000000 000000111
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
+.+-.+.+ -.++..|++.|++..|+...|..+-
T Consensus 242 ~~~l~~li---~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 242 AAELANLI---NNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp SCTTHHHH---HHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred CHHHHHHH---HHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11111222 2567888888999999998888764
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-30 Score=252.09 Aligned_cols=233 Identities=19% Similarity=0.251 Sum_probs=168.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-CCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-PNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~~~~~~~~l 206 (489)
+.|++++.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+.+|+++.+| |||+++++++.+...+||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 4599999999999999999987 468899999997653 3456668899999999999422 999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+ .+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+. ++.+||+|||+|+.+....
T Consensus 87 v~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 87 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC----
T ss_pred EEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeecccccccCccc
Confidence 9995 5889999999888999999999999999999999999999999999999993 4669999999998775433
Q ss_pred cee----eeeeccC--------------------C----CCcchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchh
Q 040003 287 TFR----VWLRLHF--------------------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRV 335 (489)
Q Consensus 287 ~~~----~~~~~~y--------------------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~ 335 (489)
... .+.+..| + -+-++.+.++.+++.|..+|......... .+.......
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccC
Confidence 211 1122222 0 11234578888999998888642210000 000000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.....+.+-.+.+. .++..|+..|+++.|+..
T Consensus 242 ~~~~~~~~l~~li~---~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 242 FPDIPEKDLQDVLK---CCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CCCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CcccCCHHHHHHHH---HHcCCChhHCCCHHHHHh
Confidence 11112222222222 567888889999988753
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=247.81 Aligned_cols=180 Identities=26% Similarity=0.465 Sum_probs=147.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 205 (489)
+.|++++.||+|+||+||+|++..+++.||+|++... ..+.+.+|+.+|+++.+||||+++++++.+ ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 5699999999999999999999999999999998642 236788999999999669999999999988 67899
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+|||||.+++|.+++. .+++..+..++.||+.||.|||++||+||||||+|||+.. ....+||+|||+|+.+..+
T Consensus 110 lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEECCTT
T ss_pred EEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--CCCEEEEEeCCCceEcCCC
Confidence 9999999999988763 4899999999999999999999999999999999999932 2337999999999877654
Q ss_pred Cceee-eeeccC----------CC----CcchhHHHHHHHhcccccCC
Q 040003 286 LTFRV-WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 286 ~~~~~-~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
..... ..+..| .+ +-++.+.++.+++.|..+|.
T Consensus 185 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 43222 111112 11 12345778888888887773
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-29 Score=243.72 Aligned_cols=237 Identities=17% Similarity=0.172 Sum_probs=168.0
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHH--hcCCCCeeEEEEEEEe---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH--LAGHPNVIQIVGAYED--- 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~--l~~hpniv~~~~~~~~--- 200 (489)
+.+.|++++.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. + +||||+++++++.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~~~~ 76 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVML-RHENILGFIASDMTSRH 76 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCC-CCTTBCCEEEEEEEEET
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhc-cCcCeeeEEEeeccccC
Confidence 346799999999999999999987 6889999998643 23556678888887 5 79999999998654
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH--------SLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH--------~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
...+|+|||||.+|+|.+++. .+.+++..+..++.|++.||.||| ++||+||||||+|||+ +.++.+
T Consensus 77 ~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill---~~~~~~ 152 (301)
T 3q4u_A 77 SSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQC 152 (301)
T ss_dssp TEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE---CTTSCE
T ss_pred CCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE---cCCCCE
Confidence 356899999999999999884 457999999999999999999999 9999999999999999 677899
Q ss_pred EEEeeccccccCCCCceee------eeeccC---------------C----CCcchhHHHHHHHhcc----------ccc
Q 040003 272 KTIDFGLSMFFRPGLTFRV------WLRLHF---------------L----FFQKQRQSVLQTRLVR----------NLN 316 (489)
Q Consensus 272 kl~DFGla~~~~~~~~~~~------~~~~~y---------------p----f~~~~~~~~~~~i~~~----------~~~ 316 (489)
||+|||+|+.......... ..+..| + -+-++.+.++.+++.| ..+
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 9999999987654433221 222222 0 1123457788899988 333
Q ss_pred CCCCCCCCCC-------CCCCCcchhhh-hhccHHHHHHHHH-HHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 317 EPGSLWPDKV-------AVPPIGDRVIA-ESLSEEEIAGLKE-MFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 317 ~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~l~~-~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
|......... .........+. ..+.......+.+ +-.++..|+..|++..|+.+.|.++
T Consensus 233 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3322111100 00000000000 1111112222222 3367888999999999999888765
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-29 Score=241.23 Aligned_cols=240 Identities=22% Similarity=0.221 Sum_probs=173.7
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCC-eeEEEEEEEeCCeE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN-VIQIVGAYEDAVAV 204 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~~~ 204 (489)
+.+.|++++.||+|+||.||+|++..+++.||+|++...... ..+.+|+.+++.+ +|++ |..+..++......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~ 80 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHh-hcCCCCCccccccCCCCce
Confidence 346799999999999999999999999999999998754322 3578999999999 5665 44555555778889
Q ss_pred EEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||+++.+.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9999999 8999999874 4579999999999999999999999999999999999999543467789999999998876
Q ss_pred CCCcee---------eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCC-CCCCcc-------
Q 040003 284 PGLTFR---------VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVA-VPPIGD------- 333 (489)
Q Consensus 284 ~~~~~~---------~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~------- 333 (489)
...... ...+..| ++. -++.+.++.+++.|..+|.......... +.....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 543311 1122222 111 1245788899999998887543221110 000000
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
......++.+-...+ -.++..|++.|++..|+...|+.+
T Consensus 240 ~~~~~~~~~~l~~li---~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 240 EVLCKGYPSEFATYL---NFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHTTTSCHHHHHHH---HHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHH---HHHHhcCcCcCCCHHHHHHHHHHH
Confidence 001112233322222 256788999999999998877653
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-30 Score=246.80 Aligned_cols=239 Identities=19% Similarity=0.191 Sum_probs=170.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEE-EeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAY-EDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~-~~~~~ 203 (489)
..|++.+.||+|+||+||+|.+..++ ..||+|.+.. .......+.+.+|+.+++++ +||||+++++++ ...+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~--~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT--CCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc--CCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCc
Confidence 45999999999999999999975433 4589998864 34556678899999999999 799999999985 55668
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|+|||||.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM 178 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGCCC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECcccccccc
Confidence 89999999999999999754 458999999999999999999999999999999999999 67789999999999877
Q ss_pred CCCCceee------eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhcc
Q 040003 283 RPGLTFRV------WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLS 341 (489)
Q Consensus 283 ~~~~~~~~------~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 341 (489)
........ ..+..| ++. -++.+.++.+++. +...+......... .+............+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCC
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCC
Confidence 54332211 111112 111 1244678888887 55555433221110 000000001112233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+-.+.+. .++..|++.|++..|+...|.++
T Consensus 259 ~~l~~li~---~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 259 DPLYEVML---KCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 33222222 56888999999999998888664
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-31 Score=264.25 Aligned_cols=232 Identities=11% Similarity=0.039 Sum_probs=165.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEE-------EE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIV-------GA 197 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~-------~~ 197 (489)
.+.|++.+.||+|+||+||+|++..+++.||||++.+.........+.+.+|+.+|+.+. +|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467999999999999999999999999999999998665555566788999995544443 799999998 77
Q ss_pred EEeCC-----------------eEEEEEeecCCCchHHHHHHcCCCCH-------HHHHHHHHHHHHHHHHHHHCCCeec
Q 040003 198 YEDAV-----------------AVHVVMELCAGGELFDRIIQRGHYTE-------RKAADLTRIIVGVVEACHSLGVMHR 253 (489)
Q Consensus 198 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~i~~~l~~lH~~~iiHr 253 (489)
+.+.+ ..||||||| +|+|.+++...+.+++ ..+..++.||+.||+|||++|||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 76654 289999999 6899999987665665 7777899999999999999999999
Q ss_pred CCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee---------eeec------------cC--CCCcchhHHHHHHH
Q 040003 254 DLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV---------WLRL------------HF--LFFQKQRQSVLQTR 310 (489)
Q Consensus 254 DlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~---------~~~~------------~y--pf~~~~~~~~~~~i 310 (489)
||||+|||+ +.++.+||+|||+|+....... .. ++.+ .| .-+-++.+.++.++
T Consensus 231 Dikp~NIll---~~~~~~kL~DFG~a~~~~~~~~-~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 231 YLRPVDIVL---DQRGGVFLTGFEHLVRDGARVV-SSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CCCGGGEEE---CTTCCEEECCGGGCEETTCEEE-CCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEE---cCCCCEEEEechhheecCCccc-CCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 999999999 6778999999999986432111 00 1111 12 11123457888999
Q ss_pred hcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 311 LVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+.|..+|......... .... . ....++.+-.+.+. +++..|+..|++..|+..
T Consensus 307 ltg~~Pf~~~~~~~~~--~~~~-~-~~~~~~~~~~~li~---~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 307 WCADLPITKDAALGGS--EWIF-R-SCKNIPQPVRALLE---GFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHSSCCC------CCS--GGGG-S-SCCCCCHHHHHHHH---HHTCSSGGGCCCHHHHHT
T ss_pred HHCCCCCcccccccch--hhhh-h-hccCCCHHHHHHHH---HHcCCCchhCCCHHHHhh
Confidence 9999888654322111 0000 0 01234444333333 567888888999888753
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=260.55 Aligned_cols=241 Identities=22% Similarity=0.219 Sum_probs=178.2
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|+++++||+|+||.||+|++..+++.||||++...... ..+.+|+++++.|.+|++|+.+..++......|
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 346799999999999999999999999999999988654322 347789999999965677888888888899999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||| +++|.+++.. .+.+++..+..++.||+.||.|||++|||||||||+||||...+..+.+||+|||+|+.+..
T Consensus 80 lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999999 9999999875 46799999999999999999999999999999999999996445678899999999998765
Q ss_pred CCcee---------eeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcc-------h
Q 040003 285 GLTFR---------VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGD-------R 334 (489)
Q Consensus 285 ~~~~~---------~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~-------~ 334 (489)
..... ...+..| ++ +-++.++++.+++.|..+|....-.... .+.+... .
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE 238 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence 43321 1222233 12 1234578999999999888653221100 0000000 0
Q ss_pred hhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 335 ~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+...++.+-...+. .++..|++.++++.++...|+.+
T Consensus 239 ~l~~~~p~~l~~li~---~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 239 ALCRGYPTEFASYFH---YCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHTTSCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHhcCCcHHHHHHHH---HHhcCChhhCcCHHHHHHHHHHH
Confidence 111122222222222 56788899999999998877664
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=253.73 Aligned_cols=239 Identities=15% Similarity=0.176 Sum_probs=167.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEE----EEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEF----ACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~----avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.|+++++||+|+||+||+|++..+++.+ |+|.+... ......+.+.+|+.+|+.+ +||||+++++++....
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS-
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC-
Confidence 46999999999999999999999888776 55555332 2233457789999999999 7999999999998765
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.++||||+.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTC----
T ss_pred ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE---cCCCCEEEccCcceeEc
Confidence 78999999999999999764 579999999999999999999999999999999999999 55678999999999877
Q ss_pred CCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 283 RPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 283 ~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
........ ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHH
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHH
Confidence 54332211 111112 121 2344778888887 88877654321110 00000000111223333
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
-...++ .++..|+..|++..|+...|..+.
T Consensus 248 l~~li~---~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 248 VYMIMR---KCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHH---HHcCCChhHCcCHHHHHHHHHHHH
Confidence 333333 567888889999999988887764
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=255.31 Aligned_cols=185 Identities=18% Similarity=0.230 Sum_probs=146.0
Q ss_pred cceeecceeccCCceEEEEE-----EEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC--CCCeeEEEEEEEe
Q 040003 128 EMYSLGRKLGQGQFGTTFLC-----VEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG--HPNVIQIVGAYED 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~-----~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~--hpniv~~~~~~~~ 200 (489)
+.|.+.++||+|+||+||+| .+..+++.||+|++... ....+.+|+++++.+.. |+||+.+++++..
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 56999999999999999999 46778999999998643 23467788888888832 8999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee--------CCC
Q 040003 201 AVAVHVVMELCAGGELFDRIIQ-----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN--------QQE 267 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~--------~~~ 267 (489)
.+..|||||||.||+|.+++.. .+.+++..+..++.||+.||+|||++|||||||||+|||+.. .+.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccc
Confidence 9999999999999999999974 356999999999999999999999999999999999999943 122
Q ss_pred CCCeEEEeeccccccCC---CCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCC
Q 040003 268 EAPLKTIDFGLSMFFRP---GLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~---~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~ 318 (489)
.+.+||+|||+|+.+.. +..... +.+..| +|. -++.+.++.+++.|.++|.
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 286 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV 286 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence 78899999999976542 111111 223333 222 2355889999999998774
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-30 Score=249.89 Aligned_cols=240 Identities=20% Similarity=0.255 Sum_probs=166.0
Q ss_pred cceeecceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 202 (489)
+.|.+++.||+|+||.||+|.+.. +++.||+|++.... ......+.+.+|+.+++++ +||||+++++++.+..
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-CCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC----
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-cchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeecccc
Confidence 469999999999999999998765 55689999987543 3455667899999999999 7999999999997755
Q ss_pred ---eEEEEEeecCCCchHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 203 ---AVHVVMELCAGGELFDRIIQ------RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
..|+|||||.+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---CTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEE
Confidence 35999999999999999853 2468999999999999999999999999999999999999 67788999
Q ss_pred EeeccccccCCCCceee----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcch
Q 040003 274 IDFGLSMFFRPGLTFRV----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDR 334 (489)
Q Consensus 274 ~DFGla~~~~~~~~~~~----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~ 334 (489)
+|||+++.+........ ..+..| ++ +-++.+.++.+++. |..+|......... .+......
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 268 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL 268 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC
Confidence 99999987754432211 111112 12 12345778888887 77777643221100 00000000
Q ss_pred hhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 335 ~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.....++.+-.+.+ -.++..|+..|++..|+...|..+
T Consensus 269 ~~~~~~~~~l~~li---~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 269 KQPEDCLDELYEIM---YSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp CCBTTCCHHHHHHH---HHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCccccHHHHHHH---HHHcCCChhhCcCHHHHHHHHHHH
Confidence 11122333322222 267788889999999998888665
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=256.88 Aligned_cols=188 Identities=24% Similarity=0.354 Sum_probs=138.7
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC---
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--- 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 201 (489)
.+.++|++++.||+|+||.||+|.+..+|+.||||++... .......+.+.+|+.+|+.+ +||||+++++++...
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 103 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSL 103 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST-TSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSG
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCcc
Confidence 3446799999999999999999999999999999998653 23455667889999999999 799999999999654
Q ss_pred ---CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 202 ---VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 202 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
..+|+||||+ +++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 104 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kL~DFG~ 178 (367)
T 2fst_X 104 EEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGL 178 (367)
T ss_dssp GGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECC---
T ss_pred ccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---CCCCCEEEeeccc
Confidence 5689999999 7899888754 679999999999999999999999999999999999999 6788999999999
Q ss_pred ccccCCCCceeeeeeccC----------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 279 SMFFRPGLTFRVWLRLHF----------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 279 a~~~~~~~~~~~~~~~~y----------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+....... ..+.+..| . -+.++.++++.+++.|...|++.
T Consensus 179 a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 179 ARHTADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCC-CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 987653321 11222222 1 12235588999999998888754
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=248.13 Aligned_cols=235 Identities=24% Similarity=0.345 Sum_probs=159.6
Q ss_pred Ccccceeecc-eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe---
Q 040003 125 NLKEMYSLGR-KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--- 200 (489)
Q Consensus 125 ~~~~~y~~~~-~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--- 200 (489)
.+.+.|.+.+ .||+|+||+||+|+++.+++.||||++... . ...+|+..+.++.+||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----P----KARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----H----HHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 3456799965 699999999999999999999999998642 1 223444444344489999999999976
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
...+|+|||||.||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 556899999999999999998754 69999999999999999999999999999999999999665556779999999
Q ss_pred cccccCCCCceeeeeeccC-------------CCCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCc-------chhh
Q 040003 278 LSMFFRPGLTFRVWLRLHF-------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIG-------DRVI 336 (489)
Q Consensus 278 la~~~~~~~~~~~~~~~~y-------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~-------~~~~ 336 (489)
+++............+..| .-+.++.+.++.+++.|..+|......... ...... ....
T Consensus 177 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (336)
T 3fhr_A 177 FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256 (336)
T ss_dssp TCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTT
T ss_pred cceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchh
Confidence 9987654433222222222 111234578888999998888643321110 000000 0000
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
...++.+-.+.+. .++..|+..|++..|+..
T Consensus 257 ~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 257 WSEVSEDAKQLIR---LLLKTDPTERLTITQFMN 287 (336)
T ss_dssp STTCCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 0123443333333 567888888999888765
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=240.21 Aligned_cols=236 Identities=17% Similarity=0.208 Sum_probs=171.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|+++++.+ +||||+++++++.+.+..|+|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEE
Confidence 45999999999999999999986 677899999975432 235788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CGGGCEEECCTTGGGGBCCHH
T ss_pred EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---CCCCCEEEccccccccccccc
Confidence 9999999999999765 568999999999999999999999999999999999999 667889999999998764321
Q ss_pred ceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHH
Q 040003 287 TFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 287 ~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 348 (489)
.... ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+-.+.+
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM 238 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHH
Confidence 1000 001111 111 1234667777777 67666543211000 0000000001112222222222
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-.+++.|+..|++..|+...|..+
T Consensus 239 ---~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 239 ---NHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp ---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHccCChhhCcCHHHHHHHHHHH
Confidence 256788888899999998888765
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=253.89 Aligned_cols=234 Identities=14% Similarity=0.035 Sum_probs=160.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc-CCCCeeEEE-------EEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA-GHPNVIQIV-------GAYE 199 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~-~hpniv~~~-------~~~~ 199 (489)
..|++++.||+|+||+||+|++..+++.||||++...........+.+.+|+.+++.|. +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45999999999999999999999999999999998766555667778899988888774 499988865 4554
Q ss_pred eC-----------------CeEEEEEeecCCCchHHHHHHcC-CCCHHHH------HHHHHHHHHHHHHHHHCCCeecCC
Q 040003 200 DA-----------------VAVHVVMELCAGGELFDRIIQRG-HYTERKA------ADLTRIIVGVVEACHSLGVMHRDL 255 (489)
Q Consensus 200 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~------~~~~~~i~~~l~~lH~~~iiHrDl 255 (489)
.. ..+|||||||. |+|.+++...+ .+..... ..++.||+.||.|||++|||||||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 33 34899999998 89999997643 3444444 466799999999999999999999
Q ss_pred CCCCEeeeeCCCCCCeEEEeeccccccCCCCceeeeeeccC-----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 256 KPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLHF-----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 256 Kp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~y-----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
||+|||+ +.++.+||+|||+|+....... ....+..| ++ +.++.+.++.+++.|..+|...
T Consensus 221 kp~NIll---~~~~~~kL~DFG~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 221 TPDNLFI---MPDGRLMLGDVSALWKVGTRGP-ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp SGGGEEE---CTTSCEEECCGGGEEETTCEEE-GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred CHHHEEE---CCCCCEEEEecceeeecCCCcc-CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999 6778999999999987643221 11111111 11 2235588999999999998765
Q ss_pred CCCCCCCCCC---------CcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 321 LWPDKVAVPP---------IGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 321 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.......... .........++.+-.+.+. +++..|++.|++..|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l 351 (371)
T 3q60_A 297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG---RFLNFDRRRRLLPLEAM 351 (371)
T ss_dssp CTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHH---HHTCSSTTTCCCHHHHT
T ss_pred CcccccchhhhhhhhccccccchhhccCCCHHHHHHHH---HHcCCChhhCCCHHHHh
Confidence 2211111100 0000011234444444444 56888999999998874
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=245.96 Aligned_cols=238 Identities=21% Similarity=0.230 Sum_probs=169.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE-
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV- 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~- 204 (489)
.|.+.++||+|+||+||+|.+..+++ .||+|++.. .......+.+.+|+.+++++ +||||+++++++.+....
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~--~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT--CCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc--cccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCc
Confidence 47888999999999999999766554 799999864 34456678899999999999 899999999999876665
Q ss_pred EEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCccccc
Confidence 999999999999999976 3568999999999999999999999999999999999999 677899999999998664
Q ss_pred CCCceee------eeeccC---------CCC----cchhHHHHHHHhccccc-CCCCCCCCCC-CCCCCcchhhhhhccH
Q 040003 284 PGLTFRV------WLRLHF---------LFF----QKQRQSVLQTRLVRNLN-EPGSLWPDKV-AVPPIGDRVIAESLSE 342 (489)
Q Consensus 284 ~~~~~~~------~~~~~y---------pf~----~~~~~~~~~~i~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~ 342 (489)
....... ..+..| ++. -++.+.++.+++.|... +......... .+............+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD 255 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCH
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchH
Confidence 4322111 111111 221 12447788888875443 3221110000 0000000001112333
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-.+.+. .++..|+..|++..|+...|..+
T Consensus 256 ~l~~li~---~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 256 SLYQVMQ---QCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp HHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 3222232 56788888999999988777554
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=247.68 Aligned_cols=186 Identities=24% Similarity=0.285 Sum_probs=149.6
Q ss_pred cccce-eecceeccCCceEEEEEEE----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 126 LKEMY-SLGRKLGQGQFGTTFLCVE----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 126 ~~~~y-~~~~~lG~G~fg~Vy~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
+.++| +++++||+|+||+||+|.. ..+++.||||++... ......+.+.+|+++|+++ +||||+++++++.+
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhC-CCcchhhEEEEEec
Confidence 34445 9999999999999988754 457889999999754 3456678899999999999 79999999999987
Q ss_pred --CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 201 --AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 201 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
...+|+|||||.+|+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 105 AGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGL 180 (318)
T ss_dssp TTTTEEEEEECCCTTCBHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGG
T ss_pred CCCceEEEEEecccCCcHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEECCccc
Confidence 4689999999999999998855 459999999999999999999999999999999999999 6778899999999
Q ss_pred ccccCCCCceee-----eeeccC---------CC----CcchhHHHHHHHhcccccCC
Q 040003 279 SMFFRPGLTFRV-----WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 279 a~~~~~~~~~~~-----~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
+..+........ ..+..| ++ +.++.+.++.+++.|..++.
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 998866543322 111112 11 12345778888888876654
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=241.93 Aligned_cols=187 Identities=22% Similarity=0.333 Sum_probs=149.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 205 (489)
+.|++++.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++++ +||||+++++++.+ ...+|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEE
Confidence 569999999999999999999999999999999976543 455677899999999999 89999999998854 67899
Q ss_pred EEEeecCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 206 VVMELCAGGELFDRIIQR----GHYTERKAADLTRIIVGVVEACHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~-----iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
+|||||++++|.+++... ..+++..+..++.|++.||.|||++| |+||||||+|||+ +.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEEecC
Confidence 999999999999998754 24899999999999999999999999 9999999999999 67788999999
Q ss_pred ccccccCCCCceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 277 GLSMFFRPGLTFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 277 Gla~~~~~~~~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
|+++.......... ..+..| ++. -++.+.++.+++.|..+|..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 218 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 99987654332111 111111 111 12346777888888776653
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=260.04 Aligned_cols=237 Identities=20% Similarity=0.249 Sum_probs=171.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.+.||+|+||+||+|.+. .+..||||++.... ...+.+.+|+.+|++| +|||||++++++. ...+||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEE
Confidence 356999999999999999999986 46789999997543 2357889999999999 8999999999986 567899
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||.+|+|.+++... ..++...+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIED 336 (454)
T ss_dssp EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEECSTTGGGGBCC
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEeeCCCceEcCC
Confidence 99999999999999754 368899999999999999999999999999999999999 6778999999999987643
Q ss_pred CCceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| +|. -++.+.++.+++. |..+|+........ .+............+.+-.+
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 416 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN 416 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHH
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 211100 001111 121 1244677778887 87777643211000 00000000001122332222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.+ -+++..|++.|.+.+++...|..+.
T Consensus 417 li---~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 417 IM---MRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp HH---HHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HH---HHHccCChhHCcCHHHHHHHHHHHH
Confidence 22 3577888888999999988887753
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=240.83 Aligned_cols=239 Identities=22% Similarity=0.227 Sum_probs=168.5
Q ss_pred ccceeecceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.|++.+.||+|+||+||+|++.. ++..||+|++... ......+.+.+|+.+++.+ +||||+++++++.+. .
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEEE-P 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECSS-S
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc--cCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcCC-C
Confidence 3569999999999999999998754 3446999998654 2455678899999999999 899999999998754 5
Q ss_pred EEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|+||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV---ASPECVKLGDFGLSRYI 163 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---EETTEEEECCCCGGGCC
T ss_pred CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---CCCCcEEeCccCCCccc
Confidence 68999999999999999765 459999999999999999999999999999999999999 45678999999999877
Q ss_pred CCCCceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 283 RPGLTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
........ ..+..| ++. -++.+.++.+++. |..+|......... .+...........++..-
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVL 243 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHH
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHH
Confidence 54332211 111112 121 1244778888886 88777532211100 000000000111223322
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...+. .++..|++.|++..|+...|..+
T Consensus 244 ~~li~---~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 244 YTLMT---RCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH---HHccCCchhCcCHHHHHHHHHHH
Confidence 22222 56778888888888888877664
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=254.66 Aligned_cols=183 Identities=25% Similarity=0.338 Sum_probs=143.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe------
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED------ 200 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------ 200 (489)
.+.|++++.||+|+||+||+|++..+++.||||++..... ...+|+++|+.+ +|||||+++++|..
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTC-CCTTBCCEEEEEEEC-----
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHc-CCCCccchhheeeecCcccc
Confidence 3569999999999999999999999999999999865432 223799999999 89999999999843
Q ss_pred --------------------------------CCeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHH
Q 040003 201 --------------------------------AVAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEA 244 (489)
Q Consensus 201 --------------------------------~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~ 244 (489)
...+++|||||. |+|.+.+.. .+.+++..+..++.||+.||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 345899999997 577766643 4679999999999999999999
Q ss_pred HHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-eeeccC----------CC----CcchhHHHHHH
Q 040003 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV-WLRLHF----------LF----FQKQRQSVLQT 309 (489)
Q Consensus 245 lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~-~~~~~y----------pf----~~~~~~~~~~~ 309 (489)
||++||+||||||+|||+.. .++.+||+|||+|+.+........ +.+..| .+ +.++.++++.+
T Consensus 157 LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 157 IHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 99999999999999999932 467899999999997754433221 112222 11 12345778888
Q ss_pred HhcccccCCCC
Q 040003 310 RLVRNLNEPGS 320 (489)
Q Consensus 310 i~~~~~~~~~~ 320 (489)
++.|...|...
T Consensus 235 ll~g~~pf~~~ 245 (383)
T 3eb0_A 235 LILGKPLFSGE 245 (383)
T ss_dssp HHHSSCSSCCS
T ss_pred HHhCCCCCCCC
Confidence 88888877653
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=245.66 Aligned_cols=186 Identities=25% Similarity=0.356 Sum_probs=154.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++++.||+|+||.||+|++..+++.||+|++..... ....+.+.+|+.+++.+ +||||+++++++.+....|+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEE
Confidence 4569999999999999999999999999999999976532 23467889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+++++|.+++. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 98 v~e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 98 IMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp EEECCTTEEHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECBTTB
T ss_pred EEEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEeecccceecCccc
Confidence 999999999999875 4679999999999999999999999999999999999999 677889999999998765433
Q ss_pred ceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 287 TFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 287 ~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
.... ..+..| ++. .++.+.++.+++.|..+|..
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 2111 111122 111 12447788888888877653
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=249.72 Aligned_cols=187 Identities=20% Similarity=0.336 Sum_probs=146.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.+.|++++.||+|+||.||+|++..+++.||||++.... ......+.+.+|+.+++.+ +||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 100 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 100 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTT
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccc
Confidence 3467999999999999999999999999999999997543 3455667889999999999 8999999999997665
Q ss_pred ---eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 203 ---AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 203 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
.+|+|||||.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 101 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 101 EFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 174 (371)
T ss_dssp TCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCCCC-
T ss_pred cccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEEEeecc
Confidence 78999999974 7888774 468999999999999999999999999999999999999 67789999999999
Q ss_pred cccCCCCcee-eeeeccC---------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFR-VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~-~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+......... .+.+..| ++. .++.+.++.+++.|..+|...
T Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 175 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 8765432221 1222222 221 234577888888888877653
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=240.66 Aligned_cols=240 Identities=22% Similarity=0.213 Sum_probs=170.2
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCe-eEEEEEEEeCCeE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV-IQIVGAYEDAVAV 204 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni-v~~~~~~~~~~~~ 204 (489)
+.+.|++++.||+|+||+||+|++..+++.||+|++..... ...+.+|+.+++.+ +|+++ ..+..++......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHh-cCCCCCCeeeeecCCCCce
Confidence 34679999999999999999999999999999998765432 23577899999999 55554 4555555788899
Q ss_pred EEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++||||| +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||+|+.+.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999999 9999999875 4579999999999999999999999999999999999999544567789999999999876
Q ss_pred CCCcee---------eeeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCCC-CCCCcc-------
Q 040003 284 PGLTFR---------VWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKVA-VPPIGD------- 333 (489)
Q Consensus 284 ~~~~~~---------~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~------- 333 (489)
...... ...+..| ++ +-++.+.++.+++.|..+|.......... +.....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 543211 1222222 22 12345788999999999887543221110 000000
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
......++.+-...+. .++..|++.|++.+|+.+.|+.+
T Consensus 240 ~~~~~~~~~~l~~li~---~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 240 EVLCKGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHTTTSCHHHHHHHH---HHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhccCCHHHHHHHH---HHHhcCCCCCCCHHHHHHHHHHH
Confidence 0001122332222222 56788999999999988877553
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=252.79 Aligned_cols=234 Identities=23% Similarity=0.321 Sum_probs=167.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---HHHHHHHHHHHHHHHhc---CCCCeeEEEEEEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---EDVEDVRREIRIMHHLA---GHPNVIQIVGAYE 199 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~E~~~l~~l~---~hpniv~~~~~~~ 199 (489)
+.+.|++++.||+|+||.||+|++..+++.||+|++........ .....+.+|+.++.++. +||||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 34569999999999999999999999999999999976543221 22344668999999984 6999999999999
Q ss_pred eCCeEEEEEee-cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 200 DAVAVHVVMEL-CAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 200 ~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
+.+..++|||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+.. .++.+||+|||+
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~kl~dfg~ 186 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLIDFGS 186 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--TTTEEEECCCSS
T ss_pred cCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--CCCeEEEEEcch
Confidence 99999999999 789999999988888999999999999999999999999999999999999931 567899999999
Q ss_pred ccccCCCCceeeeeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHH
Q 040003 279 SMFFRPGLTFRVWLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 279 a~~~~~~~~~~~~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (489)
++.+..........+..| .+ +.++.+.++.+++.|...|....- .... .......++.+-
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~--~~~~~~~~~~~~ 260 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----ILEA--ELHFPAHVSPDC 260 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----HHHT--CCCCCTTSCHHH
T ss_pred hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----Hhhh--ccCCcccCCHHH
Confidence 988765433222222222 11 123457788899998877753210 0000 000112233333
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+.+. +++..|++.|++.+|+..
T Consensus 261 ~~li~---~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 261 CALIR---RCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HHHHH---HHTCSSTTTSCCHHHHHH
T ss_pred HHHHH---HHccCChhhCcCHHHHhc
Confidence 33333 567888888999888754
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=244.84 Aligned_cols=235 Identities=22% Similarity=0.292 Sum_probs=165.6
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEE--EeCCe
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAY--EDAVA 203 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~--~~~~~ 203 (489)
.+.|++++.||+|+||.||+|.+..+++.||+|++...... .......+.+|+.+++.+ +||||+++++++ .+...
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCe
Confidence 35699999999999999999999999999999999754321 123457789999999999 799999999998 45568
Q ss_pred EEEEEeecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 204 VHVVMELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
.|+|||||.++ |.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~---~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---cCCCcEEeeccccccc
Confidence 99999999876 7777765 3569999999999999999999999999999999999999 6778899999999987
Q ss_pred cCCCCceee----eeeccC---------------CCCcchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhcc
Q 040003 282 FRPGLTFRV----WLRLHF---------------LFFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLS 341 (489)
Q Consensus 282 ~~~~~~~~~----~~~~~y---------------pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 341 (489)
......... ..+..| .-+-++.+.++.+++.|..+|......... .+.+ .........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~ 237 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK-GSYAIPGDCG 237 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-CCCCCCSSSC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc-CCCCCCCccC
Confidence 653221111 111111 011123467788888887777543210000 0000 0000111223
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+-.+.+. +++..|++.|++..|+..
T Consensus 238 ~~l~~li~---~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 238 PPLSDLLK---GMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHHHHHH---HHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 32222232 567888888999988864
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=238.37 Aligned_cols=236 Identities=19% Similarity=0.259 Sum_probs=169.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++++.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+++|+.+ +||||+++++++.+ +..|+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhC-CCcCcceEEEEEcC-CCcEE
Confidence 356999999999999999999975 567899999865432 246788999999999 89999999999874 56899
Q ss_pred EEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEECCCcccccccC
Confidence 999999999999986442 68999999999999999999999999999999999999 6778899999999987754
Q ss_pred CCceee---eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| ++ +-.+.+.++.+++. |..+|......... .+............+.+-..
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ 241 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHH
Confidence 332111 111112 11 11234677778887 77776543211000 00000000111223333222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+. .++..|+..|++.+++...|..+
T Consensus 242 li~---~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 242 LMR---LCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---HHhccChhhCCCHHHHHHHHHHH
Confidence 222 56778888889998888877654
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-29 Score=243.89 Aligned_cols=239 Identities=20% Similarity=0.187 Sum_probs=175.2
Q ss_pred cceeecceeccCCceEEEEEE----EcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE--eC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCV----EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE--DA 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~ 201 (489)
+.|++++.||+|+||.||+|+ +..+++.||+|++... .....+.+.+|+++|+++ +||||+++++++. +.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCC
Confidence 469999999999999999998 4678999999998643 455667899999999999 8999999999886 55
Q ss_pred CeEEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
..+|+|||||++++|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK 175 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCGGGCE
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE---CCCCCEEEcccccce
Confidence 679999999999999999976 3569999999999999999999999999999999999999 556789999999999
Q ss_pred ccCCCCceeee-----eeccC---------C----CCcchhHHHHHHHhcccccCCCCCCC--------C-CCCC-----
Q 040003 281 FFRPGLTFRVW-----LRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGSLWP--------D-KVAV----- 328 (489)
Q Consensus 281 ~~~~~~~~~~~-----~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~~~~--------~-~~~~----- 328 (489)
.+......... .+..| + -+-++.+.++.+++.|..++...... . ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 87654433221 11112 1 11124477888888887665432110 0 0000
Q ss_pred --CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 329 --PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 329 --~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
...........++.+-.+.+. .++..|+..|++..|+...|..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~---~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 256 LLEEGQRLPAPPACPAEVHELMK---LCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred HhhcccCCCCCCcccHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHH
Confidence 000000011122333333333 567888888999999988887764
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=242.42 Aligned_cols=238 Identities=20% Similarity=0.239 Sum_probs=170.0
Q ss_pred cceeecc-eeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGR-KLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~-~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|.+.+ .||+|+||.||+|.+. .++..||+|++... ......+.+.+|+++++.+ +||||+++++++ .....
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCc
Confidence 4477766 9999999999999864 46788999999754 3456678899999999999 899999999999 55679
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+||||+.+++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE---cCCCCEEECcccceeeec
Confidence 9999999999999988644 569999999999999999999999999999999999999 456789999999998875
Q ss_pred CCCceee-----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 284 PGLTFRV-----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 284 ~~~~~~~-----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
....... ..+..| ++ +-++.+.++.+++. |..+|......... .+...........++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE 241 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHH
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHH
Confidence 4433211 001112 11 11234677888886 88777543221100 00000000111223333
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-...+ -.++..|+..|++..|+...|..+
T Consensus 242 l~~li---~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 242 LYALM---SDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHH---HHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH---HHHcCCChhhCcCHHHHHHHHHHH
Confidence 22222 256777888888888887776554
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-29 Score=238.32 Aligned_cols=239 Identities=12% Similarity=0.101 Sum_probs=177.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC--CeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--VAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 205 (489)
+.|++.+.||+|+||+||+|++. ++.||+|++.... ......+.+.+|+.+++++ +||||+++++++.+. ...|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccc-cCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeE
Confidence 46999999999999999999984 7899999997643 3455667899999999999 799999999999887 7899
Q ss_pred EEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 206 VVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
+|||||++|+|.+++.... .+++..+..++.|++.||.|||++| |+||||||+|||+ +.++.+||+|||++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVKFS 162 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSCCT
T ss_pred eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEEeccceee
Confidence 9999999999999998765 4899999999999999999999999 9999999999999 6778899999998866
Q ss_pred cCCCCceee-------eee-ccC-C----CCcchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHH
Q 040003 282 FRPGLTFRV-------WLR-LHF-L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 282 ~~~~~~~~~-------~~~-~~y-p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 346 (489)
......... ++. ..+ . -+-++.+.++.+++.|..+|......... .............++.+-..
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (271)
T 3kmu_A 163 FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSK 242 (271)
T ss_dssp TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHH
T ss_pred ecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence 543332111 111 111 1 12245578888888888877643211000 00000001112233443333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.+. .++..|+..|++.+|+...|..+.
T Consensus 243 li~---~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 243 LMK---ICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHH---HHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHH---HHcCCChhhCcCHHHHHHHHHHhh
Confidence 333 567888999999999998887763
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-29 Score=248.01 Aligned_cols=187 Identities=23% Similarity=0.319 Sum_probs=153.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA---- 201 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 201 (489)
+...|++++.||+|+||.||+|++..+++.||||++... ......+.+.+|+++|+++ +||||+++++++...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTT
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccc
Confidence 345799999999999999999999999999999998643 3455667899999999999 799999999999765
Q ss_pred -CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 202 -VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
...|+||||+. |+|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+
T Consensus 102 ~~~~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 102 MKDVYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLAR 176 (364)
T ss_dssp CCCEEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred cceEEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCcceE
Confidence 47899999996 589888754 579999999999999999999999999999999999999 778889999999998
Q ss_pred ccCCCCcee-----eeeeccC----------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 281 FFRPGLTFR-----VWLRLHF----------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 281 ~~~~~~~~~-----~~~~~~y----------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
......... .+.+..| ++. .++.+.++.+++.|..+|+..
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 765332211 1122222 121 235578889999998888754
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=255.58 Aligned_cols=183 Identities=21% Similarity=0.279 Sum_probs=142.6
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
...|++++.||+|+||+||+|++..+++.||||++..... ...+|+++|+.| +|||||+++++|...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~ 124 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKD 124 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTT
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHc-CCCCccceeeEEeccCCCCc
Confidence 3469999999999999999999999999999999865421 234799999999 899999999988542
Q ss_pred -CeEEEEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 202 -VAVHVVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 202 -~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
..+++|||||.+ +|.+.+.. ...+++..++.++.||+.||.|||++|||||||||+|||+.. ..+.+||+||
T Consensus 125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~--~~~~~kl~DF 201 (420)
T 1j1b_A 125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET--TTTEEEECCC
T ss_pred ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC--CCCeEEeccc
Confidence 247799999975 66665542 467999999999999999999999999999999999999932 3456899999
Q ss_pred ccccccCCCCcee-eeeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 277 GLSMFFRPGLTFR-VWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 277 Gla~~~~~~~~~~-~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+|+.+..+.... .+.+..| .+ +.++.++++.+++.|...|+..
T Consensus 202 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp TTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 9998765433221 1222222 11 2235578888899888888653
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=245.84 Aligned_cols=236 Identities=19% Similarity=0.248 Sum_probs=169.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE--------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-------- 199 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-------- 199 (489)
..|++.++||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 4699999999999999999999999999999998543 35566788999999999956999999999994
Q ss_pred eCCeEEEEEeecCCCchHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQ---RGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
....+|+|||||. |+|.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||+ +.++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~---~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE---CTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE---CCCCCEEEe
Confidence 4456899999995 799888865 457999999999999999999999999 9999999999999 677889999
Q ss_pred eeccccccCCCCcee--------------eeeeccC------------CCC----cchhHHHHHHHhcccccCCCCCCCC
Q 040003 275 DFGLSMFFRPGLTFR--------------VWLRLHF------------LFF----QKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 275 DFGla~~~~~~~~~~--------------~~~~~~y------------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
|||+++.+....... ...+..| ++. -++.+.++.+++.|..+|....-..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 999998775432211 0111111 221 2345788899999988876432111
Q ss_pred CCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 325 KVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+...............-... +-.++..|+..|++..|+...|..+
T Consensus 261 --~~~~~~~~~~~~~~~~~~~~l---i~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 261 --IVNGKYSIPPHDTQYTVFHSL---IRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp -------CCCCTTCCSSGGGHHH---HHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred --hhcCcccCCcccccchHHHHH---HHHHccCChhhCcCHHHHHHHHHHH
Confidence 000000000011111111112 2256788999999999998887665
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-30 Score=246.98 Aligned_cols=236 Identities=20% Similarity=0.273 Sum_probs=168.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----- 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 200 (489)
+...|++++.||+|+||.||+|.+..+++.||+|++.... +.+.+|+++++++ +||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhC-CCCCEEEEeeeEeccccCc
Confidence 3456999999999999999999999999999999996532 3567899999999 89999999998864
Q ss_pred -----------CCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 201 -----------AVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 201 -----------~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
...+|+|||||++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~ 157 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL---VD 157 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE---cC
Confidence 45689999999999999999754 579999999999999999999999999999999999999 45
Q ss_pred CCCeEEEeeccccccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCCCCCCcc
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGD 333 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 333 (489)
++.+||+|||++..+........ ..+..| ++. .++.+.++.+++.|...+.... ........
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~~ 233 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----KFFTDLRD 233 (284)
T ss_dssp TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----HHHHHHHT
T ss_pred CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----HHHHHhhc
Confidence 67899999999988765432211 111122 111 1234566777776544332100 00000000
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL 379 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~ 379 (489)
..+...++.+....+. .++..|+..|++..|+...|..+....
T Consensus 234 ~~~~~~~~~~~~~li~---~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 234 GIISDIFDKKEKTLLQ---KLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp TCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred ccccccCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 0011223333222232 567778888888888888777765443
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=242.28 Aligned_cols=242 Identities=18% Similarity=0.202 Sum_probs=176.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeeccc-CCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRK-LTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~-~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
.|..++.||+|+||.||+|.+ +++.||+|++.... .......+.+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEE
Confidence 366678999999999999985 57899999987543 22344567899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQR---GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~ 185 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEK 185 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeeccccccccc
Confidence 9999999999998643 458999999999999999999999999999999999999 6778999999999987654
Q ss_pred CCceee----eeeccC----------C--CCcchhHHHHHHHhcccccCCCCCCCCCC-CC-------CCCcchhhh---
Q 040003 285 GLTFRV----WLRLHF----------L--FFQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-------PPIGDRVIA--- 337 (489)
Q Consensus 285 ~~~~~~----~~~~~y----------p--f~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~--- 337 (489)
...... ..+..| . -+.++.+.++.+++.|..+|......... .+ .......+.
T Consensus 186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
T 2nru_A 186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 265 (307)
T ss_dssp CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred ccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc
Confidence 322111 111122 1 11234578889999998887654322110 00 000000000
Q ss_pred hhccHHHHHHHHH-HHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 338 ESLSEEEIAGLKE-MFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 338 ~~~~~~~~~~l~~-~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
..........+.. +-.++..|+..|++..|+...|..+.
T Consensus 266 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 0111222222322 33678889999999999998887753
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=244.08 Aligned_cols=236 Identities=17% Similarity=0.271 Sum_probs=163.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.++||+|+||+||+|.+. ..||+|++.... ......+.+.+|+.+|+++ +||||+++++++ .....++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-CCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEE
Confidence 346999999999999999999754 359999986543 3566678899999999999 799999999965 5567899
Q ss_pred EEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||.+++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTTEEEECCCC--------
T ss_pred EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE---CCCCCEEEccceeccccccc
Confidence 9999999999998854 3568999999999999999999999999999999999999 56778999999999865432
Q ss_pred Cceee----eeeccC------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-------CCCCCcchhhhh
Q 040003 286 LTFRV----WLRLHF------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-------AVPPIGDRVIAE 338 (489)
Q Consensus 286 ~~~~~----~~~~~y------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 338 (489)
..... ..+..| ++ +-++.+.++.+++.|..+|......... ..... ......
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 252 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-LSKVRS 252 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCC-TTSSCT
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcc-hhhccc
Confidence 11110 111111 22 1234577888888888877643211000 00000 000111
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..+.+-.+.+. .++..|++.|++..|+...|..+
T Consensus 253 ~~~~~l~~li~---~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 253 NCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp TSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHT
T ss_pred cCCHHHHHHHH---HHccCChhhCCCHHHHHHHHHHH
Confidence 23333333333 56788888899999998888765
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=259.33 Aligned_cols=237 Identities=19% Similarity=0.217 Sum_probs=167.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|++.++||+|+||.||+|.+.. +..||||++..... ..+.+.+|+++|++| +||||+++++++.+ ...||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEE
Confidence 3569999999999999999999875 46799999975432 236789999999999 89999999999876 67899
Q ss_pred EEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||.+|+|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+++.+..
T Consensus 256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED 332 (452)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC----
T ss_pred EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE---CCCCCEEECCCccceecCC
Confidence 99999999999999643 468999999999999999999999999999999999999 6678899999999987754
Q ss_pred CCceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| +|. -++.+.++.+++. |..+|+........ .+..-.........+.+-.+
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 412 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 412 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHH
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 322111 111112 121 1244677788887 77777643211000 00000000011122332222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.+ -+++..|++.|++.+++...|..+-
T Consensus 413 li---~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 413 LM---CQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp HH---HHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HH---HHHccCChhhCcCHHHHHHHHHHHh
Confidence 22 3678888899999999988887753
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=253.97 Aligned_cols=238 Identities=19% Similarity=0.176 Sum_probs=163.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE-eCCeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE-DAVAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~~~~ 204 (489)
.|++.+.||+|+||+||+|.+..++ ..||+|.+... ......+.+.+|+.+|+++ +||||+++++++. ..+..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCe
Confidence 4889999999999999999876433 46899988642 3445678899999999999 8999999999864 45688
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeecccccccc
Confidence 9999999999999999765 358889999999999999999999999999999999999 677899999999998764
Q ss_pred CCCceee------eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccH
Q 040003 284 PGLTFRV------WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSE 342 (489)
Q Consensus 284 ~~~~~~~------~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 342 (489)
....... ..+..| ++. -++.+.++.+++. |...|+.....+.. .+............+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCH
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence 4322111 111112 221 2344778888887 66666543221110 0000000011122333
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-...+ -.++..|++.|.+..|+...|..+
T Consensus 324 ~l~~li---~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 324 PLYEVM---LKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp HHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHH---HHHcCCChhhCcCHHHHHHHHHHH
Confidence 322222 257788888899999988877654
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-29 Score=242.25 Aligned_cols=232 Identities=21% Similarity=0.259 Sum_probs=166.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+ +||||+++++++......|
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence 3466999999999999999999999999999999997542 236788999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||||.+++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..+..
T Consensus 101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECBT
T ss_pred EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE---CCCCCEEEeecccchhhhh
Confidence 99999999999999863 4679999999999999999999999999999999999999 6778899999999987654
Q ss_pred CCceee--eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CC--CCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV--WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV--PPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~--~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| ++ +.++.+.++.+++.|..+|......... .+ ...........++.+-.+
T Consensus 178 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 257 (314)
T 3com_A 178 TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTD 257 (314)
T ss_dssp TBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHH
T ss_pred hccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHH
Confidence 322111 111112 11 1234577888899888777542210000 00 000000011122332222
Q ss_pred HHHHHHhhhcCCCCCCccHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.+. .++..|+..|++..|+.
T Consensus 258 li~---~~l~~dp~~Rpt~~~ll 277 (314)
T 3com_A 258 FVK---QCLVKSPEQRATATQLL 277 (314)
T ss_dssp HHH---HHTCSCTTTSCCHHHHT
T ss_pred HHH---HHccCChhhCcCHHHHH
Confidence 222 56778888888888874
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=244.33 Aligned_cols=235 Identities=20% Similarity=0.221 Sum_probs=167.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----- 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 200 (489)
..+.|++++.||+|+||.||+|++..+++.||+|++..... ....+.+|+.+++++.+||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 34569999999999999999999999999999999875432 236788999999999779999999999987
Q ss_pred -CCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
...+|+|||||.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE---cCCCCEEEeeCc
Confidence 56899999999999999999764 579999999999999999999999999999999999999 677889999999
Q ss_pred cccccCCCCceee--eeeccC--------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchh
Q 040003 278 LSMFFRPGLTFRV--WLRLHF--------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRV 335 (489)
Q Consensus 278 la~~~~~~~~~~~--~~~~~y--------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~ 335 (489)
++..+........ ..+..| ++ +.++.+.++.+++.|..+|......... .+ .......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 254 (326)
T 2x7f_A 175 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL 254 (326)
T ss_dssp TTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC
T ss_pred CceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccC
Confidence 9987643221111 111111 11 1234578888999888777542210000 00 0000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
....++.+-...+. .++..|+..|++..|+..
T Consensus 255 ~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 KSKKWSKKFQSFIE---SCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCSCSCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred CccccCHHHHHHHH---HHhccChhhCCCHHHHhh
Confidence 11122333222333 567778888888888754
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=241.47 Aligned_cols=233 Identities=21% Similarity=0.229 Sum_probs=164.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-CeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA-VAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-~~~~l 206 (489)
+.|++.+.||+|+||+||+|.+ +++.||+|++.... ..+.+.+|+.+++++ +||||+++++++.+. +..|+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEE
T ss_pred hhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEE
Confidence 4699999999999999999987 47899999986432 346788999999999 799999999987554 57899
Q ss_pred EEeecCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||+.+++|.+++...+. +++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC------
T ss_pred EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE---eCCCcEEEeeccccccccc
Confidence 9999999999999976543 8999999999999999999999999999999999999 6778999999999986643
Q ss_pred CCceeeeeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 285 GLTFRVWLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 285 ~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
..... ..+..| ++. -++.+.++.+++. |..+|......... .+............+.+-...+.
T Consensus 170 ~~~~~-~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 248 (278)
T 1byg_A 170 TQDTG-KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 248 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHH
T ss_pred cccCC-CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHH
Confidence 32211 111112 111 1244678888886 88777654321110 00000001111233333333333
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 350 EMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.++..|+..|++..|+...|..+
T Consensus 249 ---~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 249 ---NCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp ---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHhcCChhhCCCHHHHHHHHHHH
Confidence 56788888899999998888765
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-29 Score=240.97 Aligned_cols=235 Identities=22% Similarity=0.261 Sum_probs=168.3
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|++++.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 91 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKL 91 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeE
Confidence 45677999999999999999999999999999999986542 33457888999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||++++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTSCEEECCCHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---CCCCCEEEEECCCCcccc
Confidence 999999999999998865 4679999999999999999999999999999999999999 677889999999986432
Q ss_pred CCCce--eeeeeccC--------------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC--CCCcchhhhhhc
Q 040003 284 PGLTF--RVWLRLHF--------------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV--PPIGDRVIAESL 340 (489)
Q Consensus 284 ~~~~~--~~~~~~~y--------------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ 340 (489)
..... ....+..| ++. .++.+.++.+++.|..+|......... .+ ...........+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 248 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGS
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCcccc
Confidence 11000 00111111 111 134477888888888777543210000 00 000000111223
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+.+-...+. .++..|++.|++..|+.
T Consensus 249 ~~~l~~li~---~~l~~dp~~Rps~~~ll 274 (302)
T 2j7t_A 249 SVEFRDFLK---IALDKNPETRPSAAQLL 274 (302)
T ss_dssp CHHHHHHHH---HHSCSCTTTSCCHHHHT
T ss_pred CHHHHHHHH---HHcccChhhCCCHHHHh
Confidence 333223333 56778888888888764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=251.91 Aligned_cols=152 Identities=21% Similarity=0.362 Sum_probs=134.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHH--------------HHHHHHHHHHHHHHhcCCCCee
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE--------------DVEDVRREIRIMHHLAGHPNVI 192 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~--------------~~~~~~~E~~~l~~l~~hpniv 192 (489)
.+.|++++.||+|+||.||+|.+ +++.||+|++......... ..+.+.+|+.+++++ +||||+
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~ 106 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCL 106 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcc
Confidence 45799999999999999999998 8999999998754322111 127789999999999 799999
Q ss_pred EEEEEEEeCCeEEEEEeecCCCchHHH------HHH--cCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeee
Q 040003 193 QIVGAYEDAVAVHVVMELCAGGELFDR------IIQ--RGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFI 263 (489)
Q Consensus 193 ~~~~~~~~~~~~~lv~e~~~~g~L~~~------l~~--~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~ 263 (489)
++++++.+.+..|+|||||++++|.++ +.. .+.+++..+..++.|++.||.|||+ +||+||||||+|||+
T Consensus 107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~- 185 (348)
T 2pml_X 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM- 185 (348)
T ss_dssp CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE-
T ss_pred eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE-
Confidence 999999999999999999999999988 554 4679999999999999999999999 999999999999999
Q ss_pred eCCCCCCeEEEeeccccccCC
Q 040003 264 NQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 264 ~~~~~~~~kl~DFGla~~~~~ 284 (489)
+.++.+||+|||++.....
T Consensus 186 --~~~~~~kl~dfg~~~~~~~ 204 (348)
T 2pml_X 186 --DKNGRVKLSDFGESEYMVD 204 (348)
T ss_dssp --CTTSCEEECCCTTCEECBT
T ss_pred --cCCCcEEEecccccccccc
Confidence 6778999999999987644
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-29 Score=252.17 Aligned_cols=186 Identities=22% Similarity=0.347 Sum_probs=148.7
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc-----CCCCeeEEEEEEE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA-----GHPNVIQIVGAYE 199 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~~~ 199 (489)
.+..+|+++++||+|+||+||+|++..+++.||||++... ......+.+|+.+++.+. +|+||+++++++.
T Consensus 94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~ 169 (429)
T 3kvw_A 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 169 (429)
T ss_dssp EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence 4456799999999999999999999999999999999642 344567888999999884 4779999999999
Q ss_pred eCCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCC--eEEEe
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAP--LKTID 275 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~--~kl~D 275 (489)
....+|+|||||. ++|.+++.... .+++..++.++.||+.||.|||++|||||||||+|||+ +.++. +||+|
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl---~~~~~~~vkL~D 245 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL---KQQGRSGIKVID 245 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEE---SSTTSCCEEECC
T ss_pred cCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---ccCCCcceEEee
Confidence 9999999999995 68999887653 48999999999999999999999999999999999999 44554 99999
Q ss_pred eccccccCCCCceeeeeeccC---------CC----CcchhHHHHHHHhcccccCCC
Q 040003 276 FGLSMFFRPGLTFRVWLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 276 FGla~~~~~~~~~~~~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~ 319 (489)
||+|+....... ..+.+..| ++ +.++.++++.+++.|...|+.
T Consensus 246 FG~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 246 FGSSCYEHQRVY-TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp CTTCEETTCCCC-SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccceecCCccc-ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 999976543322 11112222 11 123446777777777766654
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=242.94 Aligned_cols=239 Identities=16% Similarity=0.192 Sum_probs=165.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEEeC--
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL-AGHPNVIQIVGAYEDA-- 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~-- 201 (489)
.+.+.|++++.||+|+||.||+|.+. ++.||||++... ......+|.+++..+ .+||||+++++++...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 34567999999999999999999875 889999998543 123445566655543 2799999999999887
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEeeeeCCCCCCe
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL--------GVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
..+|+|||||.+|+|.+++.. ..+++..+..++.|++.||.|||++ |||||||||+|||+ +.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill---~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE---CTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE---CCCCCE
Confidence 789999999999999999865 4799999999999999999999999 99999999999999 677899
Q ss_pred EEEeeccccccCCCCceee------eeeccC------------C-------CCcchhHHHHHHHhcccccC---------
Q 040003 272 KTIDFGLSMFFRPGLTFRV------WLRLHF------------L-------FFQKQRQSVLQTRLVRNLNE--------- 317 (489)
Q Consensus 272 kl~DFGla~~~~~~~~~~~------~~~~~y------------p-------f~~~~~~~~~~~i~~~~~~~--------- 317 (489)
||+|||+|+.+........ ..+..| + -+-++.+.++.+++.|...+
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 9999999987654332211 222222 1 12345678999999984433
Q ss_pred -CCCCCCCCC-------CCCCCcchhhhhhcc-HHHHHHHHH-HHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 318 -PGSLWPDKV-------AVPPIGDRVIAESLS-EEEIAGLKE-MFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 318 -~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~l~~-~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
......... ............... ......+.+ +-.++..|+..|++..|+...|..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 221111100 000000000111111 111222222 2367888999999999998888765
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-30 Score=253.94 Aligned_cols=244 Identities=18% Similarity=0.144 Sum_probs=166.6
Q ss_pred cceeecceeccCCceEEEEEEEcC---CCcEEEEEEeecccCCCHHH--------HHHHHHHHHHHHHhcCCCCeeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA---TQKEFACKSIAKRKLTTEED--------VEDVRREIRIMHHLAGHPNVIQIVG 196 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~avK~i~~~~~~~~~~--------~~~~~~E~~~l~~l~~hpniv~~~~ 196 (489)
+.|++++.||+|+||+||+|++.. ++..||+|++.........+ ...+.+|+.+++.+ +||||+++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~ 115 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYG 115 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeec
Confidence 569999999999999999999987 78899999987542111111 12356788889988 8999999999
Q ss_pred EEEe----CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 197 AYED----AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 197 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
++.. ....|+||||| +++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..+ ..+.+|
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~~k 193 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-NPDQVY 193 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS-STTSEE
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC-CCCcEE
Confidence 9988 78899999999 99999999877789999999999999999999999999999999999999542 223899
Q ss_pred EEeeccccccCCCCcee---------eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CC
Q 040003 273 TIDFGLSMFFRPGLTFR---------VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AV 328 (489)
Q Consensus 273 l~DFGla~~~~~~~~~~---------~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~ 328 (489)
|+|||+|+.+....... ...+..| ++. -++.+.++.+++.|..+|......... ..
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 99999998764322111 1122222 121 124478889999998888542211000 00
Q ss_pred CCCcchhhhh---------hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC
Q 040003 329 PPIGDRVIAE---------SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA 377 (489)
Q Consensus 329 ~~~~~~~~~~---------~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~ 377 (489)
.......+.. .++.+-.+.+. .++..|++.|++++++...|+.++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLLDELPQSVLKWAPSGSSCCEIAQFLV---CAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHTTTHHHHHHSCTTSCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhcccccHHHHhhccccccHHHHHHHHH---HHhhcCcccCCCHHHHHHHHhccCC
Confidence 0000000000 22222222222 5677888888898888888877654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=237.50 Aligned_cols=150 Identities=28% Similarity=0.448 Sum_probs=134.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----- 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 200 (489)
+.+.|++++.||+|+||.||+|++..+++.||+|++... ....+.+.+|+.+++++ +||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchh
Confidence 345699999999999999999999999999999999642 45567889999999999 79999999998865
Q ss_pred --------CCeEEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 201 --------AVAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 201 --------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
....|+|||||++|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~ 155 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV 155 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCE
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCCE
Confidence 467899999999999999997543 57888999999999999999999999999999999999 677889
Q ss_pred EEEeeccccccC
Q 040003 272 KTIDFGLSMFFR 283 (489)
Q Consensus 272 kl~DFGla~~~~ 283 (489)
||+|||++..+.
T Consensus 156 kl~dfg~~~~~~ 167 (303)
T 1zy4_A 156 KIGDFGLAKNVH 167 (303)
T ss_dssp EECCCCCCSCTT
T ss_pred EEeeCcchhhcc
Confidence 999999998765
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=241.84 Aligned_cols=234 Identities=19% Similarity=0.154 Sum_probs=155.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|++..+++.||+|++.... ......+.+..+...++.+ +||||+++++++.+.+..|+|
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV-NSQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC----CHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc-CcHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEEE
Confidence 56999999999999999999999999999999986542 2222333344444446666 899999999999999999999
Q ss_pred EeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 208 MELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
||||. |+|.+++.. .+.+++..+..++.|++.||.|||++ ||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecCCcccc
Confidence 99997 488777653 46799999999999999999999998 99999999999999 67789999999999876
Q ss_pred CCCCceee-eeeccC-------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchhhhhhcc
Q 040003 283 RPGLTFRV-WLRLHF-------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRVIAESLS 341 (489)
Q Consensus 283 ~~~~~~~~-~~~~~y-------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 341 (489)
........ ..+..| ++ +.++.+.++.+++.|..+|.....+... .+...........++
T Consensus 161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
T 3fme_A 161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS 240 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSC
T ss_pred cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCC
Confidence 54332211 111111 11 1234477888999998887632110000 000000001111233
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+-.+.+. .++..|+..|++..|+..
T Consensus 241 ~~~~~li~---~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 241 AEFVDFTS---QCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHH---HHhhcChhhCcCHHHHHh
Confidence 33333332 567778888888888654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=241.89 Aligned_cols=152 Identities=24% Similarity=0.385 Sum_probs=129.3
Q ss_pred ccceeecceeccCCceEEEEEEEc-CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEE----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEK-ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYE---- 199 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~---- 199 (489)
.+.|++++.||+|+||.||+|++. .+++.||+|++...... ......+.+|+.+++.+. +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456999999999999999999995 67899999998754322 112234567888877764 7999999999987
Q ss_pred -eCCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 200 -DAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 200 -~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.....++||||+. |+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili---~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE---cCCCCEEEecC
Confidence 5678999999997 59999987653 48999999999999999999999999999999999999 67789999999
Q ss_pred ccccccC
Q 040003 277 GLSMFFR 283 (489)
Q Consensus 277 Gla~~~~ 283 (489)
|+++.+.
T Consensus 165 g~~~~~~ 171 (326)
T 1blx_A 165 GLARIYS 171 (326)
T ss_dssp CSCCCCC
T ss_pred ccccccc
Confidence 9998764
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=261.06 Aligned_cols=236 Identities=19% Similarity=0.214 Sum_probs=169.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||.||+|.+.. +..||||++..... ..+.+.+|+++|++| +|||||++++++.+ ..+|||
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEE
T ss_pred hhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEe
Confidence 568999999999999999999875 46799999975432 236789999999999 89999999999876 678999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||.+|+|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+++.+...
T Consensus 340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCTTSTTTCCCH
T ss_pred eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---cCCCcEEEcccccceecCCC
Confidence 9999999999999643 468999999999999999999999999999999999999 66788999999999876432
Q ss_pred Cceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... ..+..| .|. -++.+.++.+++. |..+|......... .+...........++.+-.+.
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 496 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 496 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 11000 000111 111 1244677778877 77776543211000 000000000111223322222
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
+ -+++..|++.|.+.+++...|..+-
T Consensus 497 i---~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 497 M---CQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp H---HHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred H---HHHcCCChhHCcCHHHHHHHHHHHh
Confidence 2 3678888889999999988887763
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=243.59 Aligned_cols=188 Identities=24% Similarity=0.324 Sum_probs=151.0
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC---
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA--- 201 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 201 (489)
.+.+.|++.+.||+|+||.||+|++..+++.||||++... ........+.+|+.+|+++ +||||+++++++...
T Consensus 8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 84 (353)
T 2b9h_A 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFE 84 (353)
T ss_dssp CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCST
T ss_pred ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccC
Confidence 4556799999999999999999999999999999999643 3455567788999999999 799999999988654
Q ss_pred --CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 202 --VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 202 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...|+||||+. ++|.+++.. +.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 85 ~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 85 NFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLA 159 (353)
T ss_dssp TCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred ccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---cCCCcEEEEecccc
Confidence 67999999996 689888765 579999999999999999999999999999999999999 67788999999999
Q ss_pred cccCCCCcee------------eeeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFR------------VWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~------------~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.+....... .+.+..| ++ +-++.+.++.+++.|...|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 8765322110 0111112 11 1124477888888888887654
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-29 Score=249.27 Aligned_cols=231 Identities=15% Similarity=0.100 Sum_probs=166.0
Q ss_pred cceeecceeccCCceEEEEEEEcCC--------CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeE------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT--------QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQ------ 193 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~--------~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~------ 193 (489)
+.|++.+.||+|+||.||+|++..+ ++.||+|++... +.+.+|+++++++ +||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l-~h~niv~~~~~~~ 112 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRA-AKPLQVNKWKKLY 112 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHH-CCHHHHHHHHHHT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHh-cccchhhhhhhhc
Confidence 5699999999999999999999874 889999998653 3577999999999 7999887
Q ss_pred ---------EEEEEEe-CCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEe
Q 040003 194 ---------IVGAYED-AVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFL 261 (489)
Q Consensus 194 ---------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nil 261 (489)
+++++.. ....|+||||| +++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence 6777766 78899999999 99999999875 78999999999999999999999999999999999999
Q ss_pred eeeCCCCC--CeEEEeeccccccCCCCceee---------eeeccC---------CCC----cchhHHHHHHHhcccccC
Q 040003 262 FINQQEEA--PLKTIDFGLSMFFRPGLTFRV---------WLRLHF---------LFF----QKQRQSVLQTRLVRNLNE 317 (489)
Q Consensus 262 l~~~~~~~--~~kl~DFGla~~~~~~~~~~~---------~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~ 317 (489)
+ +.++ .+||+|||+|+.+........ ..+..| ++. -++.+.++.+++.|..+|
T Consensus 192 ~---~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 192 V---DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp E---ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred E---cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9 4455 899999999987653321110 112222 111 124477888888888877
Q ss_pred CCCCCCCCCC----------CCCCcchhh-hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 318 PGSLWPDKVA----------VPPIGDRVI-AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 318 ~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.......... ......... ...++.+-...+. .++..|++.|++.+|+...|..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLK---VVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp GGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHH---HHHhCChhhCCCHHHHHHHHHH
Confidence 6432110000 000000000 0112333333333 5677888889999888877754
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-29 Score=248.74 Aligned_cols=187 Identities=24% Similarity=0.363 Sum_probs=148.6
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.+.+.|.+.+.||+|+||+||+|++..+++.||||++.... ........+.+|+.+++.+ +||||+++++++......
T Consensus 39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 116 (371)
T 4exu_A 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSL 116 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSS
T ss_pred cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCc
Confidence 44567999999999999999999999999999999997543 3455667889999999999 799999999999877655
Q ss_pred ------EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 205 ------HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 205 ------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
|+|||||. ++|.+.+ ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 117 ~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 117 RNFYDFYLVMPFMQ-TDLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGL 190 (371)
T ss_dssp TTCCCCEEEEECCC-EEHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECSTTC
T ss_pred ccceeEEEEEcccc-ccHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEEEecCc
Confidence 99999996 6887766 3459999999999999999999999999999999999999 7778899999999
Q ss_pred ccccCCCCceeeeeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 279 SMFFRPGLTFRVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 279 a~~~~~~~~~~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
++........ .+.+..| ++ +-++.+.++.+++.|..+|...
T Consensus 191 a~~~~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 191 ARHADAEMTG-YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp C--------C-TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCcCC-cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 9866432211 0111111 11 1235578888999998888654
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=248.54 Aligned_cols=235 Identities=22% Similarity=0.311 Sum_probs=175.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---HHHHHHHHHHHHHHHhc-CCCCeeEEEEEEEe
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---EDVEDVRREIRIMHHLA-GHPNVIQIVGAYED 200 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~E~~~l~~l~-~hpniv~~~~~~~~ 200 (489)
.+.+.|++++.||+|+||.||+|++..+++.||||++........ ...+.+.+|+.+++++. .||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 345679999999999999999999999999999999976543321 12245678999999995 26999999999999
Q ss_pred CCeEEEEEeecCC-CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 AVAVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
....++||||+.+ ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+.. .++.+||+|||++
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSG 197 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTC
T ss_pred CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--CCCCEEEeeCccc
Confidence 9999999999986 899999988889999999999999999999999999999999999999931 4678999999999
Q ss_pred cccCCCCceeeeeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHH
Q 040003 280 MFFRPGLTFRVWLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (489)
+.+..........+..| ++ +-++.+.++.+++.|..+|....- .... .......++.+-.
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~--~~~~~~~~~~~~~ 271 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----IIRG--QVFFRQRVSSECQ 271 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----HHHC--CCCCSSCCCHHHH
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh----hhcc--cccccccCCHHHH
Confidence 88765433222222222 22 123457788899998877753210 0000 0001122333333
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
..+. +++..|++.|++.+|+..
T Consensus 272 ~li~---~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 272 HLIR---WCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHH---HHTCSSGGGSCCHHHHHT
T ss_pred HHHH---HHccCChhhCcCHHHHhc
Confidence 3333 567888888998888754
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-29 Score=253.57 Aligned_cols=190 Identities=22% Similarity=0.359 Sum_probs=139.2
Q ss_pred cCcccceee-cceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 124 GNLKEMYSL-GRKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 124 ~~~~~~y~~-~~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
..+.+.|++ +++||+|+||+||+|+++ .+++.||||++..... ...+.+|+.+|++| +|||||+++++|..
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l-~hpniv~~~~~~~~ 89 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLS 89 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHC-CCTTBCCCCEEEEE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhc-CCCCeeeEeeEEec
Confidence 345566887 568999999999999976 5688999999965432 14678999999999 79999999999954
Q ss_pred --CCeEEEEEeecCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC-CCC
Q 040003 201 --AVAVHVVMELCAGGELFDRIIQR---------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ-QEE 268 (489)
Q Consensus 201 --~~~~~lv~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~-~~~ 268 (489)
...+|||||||. ++|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||+... +..
T Consensus 90 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 90 HADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTT
T ss_pred CCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCC
Confidence 778999999996 5888877532 248999999999999999999999999999999999999543 456
Q ss_pred CCeEEEeeccccccCCCCce-----eeeeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 269 APLKTIDFGLSMFFRPGLTF-----RVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~-----~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.+||+|||+|+.+...... ..+.+..| .+ +.++.++++.+++.|...|...
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 78999999999877543211 11222222 11 2235588999999999888643
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=244.17 Aligned_cols=186 Identities=22% Similarity=0.300 Sum_probs=134.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|++..+++.||+|++..... ....+.+.+|+.+++++ +||||+++++++...+..|+|
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCC-CCTTBCCEEEEEESSSCEEEE
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEE
Confidence 569999999999999999999988999999999865422 23456788999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 208 MELCAGGELFDRIIQ--------RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~--------~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
|||+.+++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE---cCCCCEEEEeccch
Confidence 999999999999864 3558999999999999999999999999999999999999 67788999999999
Q ss_pred cccCCCCceee-------eeeccC----------CCC----cchhHHHHHHHhcccccCCC
Q 040003 280 MFFRPGLTFRV-------WLRLHF----------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 280 ~~~~~~~~~~~-------~~~~~y----------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+..+..... ..+..| ++. -.+.+.++.+++.|..+|..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 87654322110 111122 111 12346788888888887764
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-29 Score=250.00 Aligned_cols=182 Identities=21% Similarity=0.299 Sum_probs=140.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV---- 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 202 (489)
...|++++.||+|+||+||+|++..+++ ||+|++...... ..+|+++|+.+ +||||++++++|....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~-------~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~ 109 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF-------KNRELQIMRIV-KHPNVVDLKAFFYSNGDKKD 109 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS-------CCHHHHHHHTC-CCTTBCCEEEEEEEESSSSS
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch-------HHHHHHHHHhC-CCCCcceEEEEEEecCCCCC
Confidence 4569999999999999999999987765 888887643321 23699999999 8999999999996543
Q ss_pred --eEEEEEeecCCCchHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 203 --AVHVVMELCAGGELFDRII----QRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
.+|+|||||.++ +...+. ....+++..++.++.||+.||.|||++||+||||||+|||+. ..++.+||+||
T Consensus 110 ~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~kL~DF 186 (394)
T 4e7w_A 110 EVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVLKLIDF 186 (394)
T ss_dssp CEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCC
T ss_pred ceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcEEEeeC
Confidence 389999999764 444333 246799999999999999999999999999999999999993 15778999999
Q ss_pred ccccccCCCCceee-eeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 277 GLSMFFRPGLTFRV-WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 277 Gla~~~~~~~~~~~-~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+|+.+..+..... +.+..| .+ +-++.++++.+++.|...|++.
T Consensus 187 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 187 GSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp TTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99988754432211 112222 11 1235578888899888888754
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-29 Score=249.40 Aligned_cols=189 Identities=20% Similarity=0.289 Sum_probs=149.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc-------CCCCeeEEEEEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA-------GHPNVIQIVGAY 198 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~-------~hpniv~~~~~~ 198 (489)
+.++|+++++||+|+||+||+|++..+++.||||++.. .....+.+.+|+.+|+.+. +|+||++++++|
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS----AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec----CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 45679999999999999999999999999999999864 2455678899999999994 278899999999
Q ss_pred E----eCCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCC-----
Q 040003 199 E----DAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQ----- 266 (489)
Q Consensus 199 ~----~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~----- 266 (489)
. ....+|+||||| +++|.+.+... +.+++..++.++.||+.||.|||++ |||||||||+|||+..++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhh
Confidence 7 566899999999 66777777654 4699999999999999999999998 999999999999994321
Q ss_pred -----------------------------------------CCCCeEEEeeccccccCCCCceeeeeeccC---------
Q 040003 267 -----------------------------------------EEAPLKTIDFGLSMFFRPGLTFRVWLRLHF--------- 296 (489)
Q Consensus 267 -----------------------------------------~~~~~kl~DFGla~~~~~~~~~~~~~~~~y--------- 296 (489)
....+||+|||+|+........ .+.+..|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~-~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE-DIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCS-CCSCGGGCCHHHHHTS
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCcc-CCCCCcccCChhhcCC
Confidence 1137999999999876543221 1222222
Q ss_pred CCC----cchhHHHHHHHhcccccCCCC
Q 040003 297 LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 297 pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
++. .++.++++.+++.|..+|...
T Consensus 269 ~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 269 GYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 121 234578889999998888643
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=242.87 Aligned_cols=187 Identities=25% Similarity=0.351 Sum_probs=142.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE------
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE------ 199 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~------ 199 (489)
+.++|++++.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 84 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQL 84 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBC
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccc
Confidence 456799999999999999999999999999999998643 456678899999999999 8999999999873
Q ss_pred --------eCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 200 --------DAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 200 --------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
+....|+||||+. |+|.+++. .+.+++..+..++.|++.||.|||++||+||||||+|||+.. .++.+
T Consensus 85 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~ 160 (320)
T 2i6l_A 85 TDDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVL 160 (320)
T ss_dssp CC----CCSCSEEEEEEECCS-EEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--TTTEE
T ss_pred ccccccccccCceeEEeeccC-CCHHHHhh-cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCeE
Confidence 4478999999997 69988874 467999999999999999999999999999999999999942 35689
Q ss_pred EEEeeccccccCCCCceee-----eeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 272 KTIDFGLSMFFRPGLTFRV-----WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 272 kl~DFGla~~~~~~~~~~~-----~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
||+|||+++.......... ..+..| ++ +-++.+.++.+++.|..+|...
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 9999999987643211110 111111 11 1124477888888888877643
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=240.63 Aligned_cols=232 Identities=23% Similarity=0.268 Sum_probs=163.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||+||+|.+. ++.||+|++.. ....+.+.+|+++|+++ +||||+++++++.+ ..|+|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-----~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--~~~lv 77 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES-----ESERKAFIVELRQLSRV-NHPNIVKLYGACLN--PVCLV 77 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS-----TTHHHHHHHHHHHHHHC-CCTTBCCEEEBCTT--TTEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC-----hhHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC--CcEEE
Confidence 45999999999999999999874 68899999853 23457889999999999 89999999998874 47999
Q ss_pred EeecCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCCCCEeeeeCCCCCC-eEEEeecccc
Q 040003 208 MELCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHS---LGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSM 280 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~iiHrDlKp~Nill~~~~~~~~-~kl~DFGla~ 280 (489)
||||++|+|.+++.... .++...+..++.|++.||.|||+ +||+||||||+|||+ +.++. +||+|||++.
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---VAGGTVLKICDFGTAC 154 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEE---ETTTTEEEECCCCC--
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEE---eCCCCEEEEccccccc
Confidence 99999999999997654 37889999999999999999999 899999999999999 44454 7999999998
Q ss_pred ccCCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchhhhhhccHHH
Q 040003 281 FFRPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 281 ~~~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 344 (489)
......... ..+..| ++. -.+.+.++.+++.|..+|......... .+...........++.+-
T Consensus 155 ~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (307)
T 2eva_A 155 DIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHH
T ss_pred ccccccccC-CCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHH
Confidence 664322111 112222 121 134578888999998887643211100 000000000112233333
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
.+.+. +++..|+..|++.+|+...|..+.
T Consensus 234 ~~li~---~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 234 ESLMT---RCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HHHHH---HHhcCChhhCcCHHHHHHHHHHHH
Confidence 33333 567889999999999998887763
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=241.23 Aligned_cols=153 Identities=28% Similarity=0.402 Sum_probs=133.9
Q ss_pred cceeecceeccCCceEEEEEEE----cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC-
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE----KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~- 202 (489)
+.|++++.||+|+||.||+|+. ..+++.||+|++... .....+.+.+|+.+|+++ +||||+++++++....
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC---
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCC
Confidence 4599999999999999999984 568999999998653 345667899999999999 7999999999986644
Q ss_pred -eEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 203 -AVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 203 -~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 193 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCE
T ss_pred CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---cCCCcEEEecCcchh
Confidence 789999999999999999775 458999999999999999999999999999999999999 556789999999999
Q ss_pred ccCCCCc
Q 040003 281 FFRPGLT 287 (489)
Q Consensus 281 ~~~~~~~ 287 (489)
.......
T Consensus 194 ~~~~~~~ 200 (326)
T 2w1i_A 194 VLPQDKE 200 (326)
T ss_dssp ECCSSCS
T ss_pred hcccccc
Confidence 8765443
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-28 Score=237.97 Aligned_cols=188 Identities=25% Similarity=0.387 Sum_probs=149.5
Q ss_pred CcccceeecceeccCCceEEEEEEE-cCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCC------CeeEEEEE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVE-KATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP------NVIQIVGA 197 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp------niv~~~~~ 197 (489)
.+.++|++++.||+|+||+||+|.+ ..+++.||+|++.. .....+.+.+|+++++.+ +|+ +|++++++
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~ 85 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN----VDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEW 85 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS----SHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec----CCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecc
Confidence 3456799999999999999999998 56889999999863 244567888999999998 455 59999999
Q ss_pred EEeCCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC--------
Q 040003 198 YEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE-------- 267 (489)
Q Consensus 198 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~-------- 267 (489)
+.+.+..|+||||| +++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+...+.
T Consensus 86 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 86 FEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred cccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcc
Confidence 99999999999999 889999998765 6889999999999999999999999999999999999943221
Q ss_pred --------CCCeEEEeeccccccCCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 268 --------EAPLKTIDFGLSMFFRPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 268 --------~~~~kl~DFGla~~~~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
.+.+||+|||+++........ ...+..| ++. -++.+.++.+++.|...|+.
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 236 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEHHST-LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSCCCS-SCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCceEeeCcccccCcccccc-ccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 567999999999875433211 1112222 121 12446778888888777764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=265.99 Aligned_cols=178 Identities=15% Similarity=0.137 Sum_probs=126.9
Q ss_pred ceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC-------HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT-------EEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~-------~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
..++.|++|.+..++....|+.||||++.+..... ....+++.+|+++|+++..|+||+++++++++.+.+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 45788888988888888899999999997653221 34456799999999999889999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|||||+|++|.++|...+.+++. .|++||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+....
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC---
T ss_pred EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCCCC
Confidence 99999999999999988888765 478999999999999999999999999999 778899999999998775443
Q ss_pred ceeeeeeccCCCCcchhHHHHHHHhcccccCCCCCCCC
Q 040003 287 TFRVWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPD 324 (489)
Q Consensus 287 ~~~~~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~ 324 (489)
...... ..+...+..+++.|.+.+..+.|..
T Consensus 394 ~~~~t~-------vGTp~YmAPE~l~g~~~~~~d~~s~ 424 (569)
T 4azs_A 394 SWPTNL-------VQSFFVFVNELFAENKSWNGFWRSA 424 (569)
T ss_dssp CCSHHH-------HHHHHHHHHHHC-------------
T ss_pred ccccCc-------eechhhccHHHhCCCCCCccccccc
Confidence 221100 0123445567778888777777743
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=248.67 Aligned_cols=155 Identities=23% Similarity=0.293 Sum_probs=129.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----CHHHHHHHHHHHHHHHHhc--------CCCCeeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----TEEDVEDVRREIRIMHHLA--------GHPNVIQI 194 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~--------~hpniv~~ 194 (489)
+.|++++.||+|+||+||+|++ +++.||||++...... .....+.+.+|+.+|+.|. +|||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 4599999999999999999998 6899999999865432 2234577889999999995 48888888
Q ss_pred EEEEE------------------------------eCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 040003 195 VGAYE------------------------------DAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244 (489)
Q Consensus 195 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~ 244 (489)
.+.+. +...+|||||||.+|++.+.+.+ +.+++..++.++.||+.||.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 77653 26789999999999987777644 678999999999999999999
Q ss_pred HH-HCCCeecCCCCCCEeeeeCC-----------------CCCCeEEEeeccccccCCC
Q 040003 245 CH-SLGVMHRDLKPENFLFINQQ-----------------EEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 245 lH-~~~iiHrDlKp~Nill~~~~-----------------~~~~~kl~DFGla~~~~~~ 285 (489)
|| ++|||||||||+|||+...+ ....+||+|||+|+.+..+
T Consensus 177 lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~ 235 (336)
T 2vuw_A 177 AEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG 235 (336)
T ss_dssp HHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT
T ss_pred HHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC
Confidence 99 99999999999999996532 1127999999999987643
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=243.01 Aligned_cols=189 Identities=21% Similarity=0.267 Sum_probs=143.5
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccC--------CCHHHHHHHHHHHHHHHHhcCCCCeeEEEEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL--------TTEEDVEDVRREIRIMHHLAGHPNVIQIVGA 197 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~--------~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~ 197 (489)
+.+.|++++.||+|+||.||+|.+.. ++.||||++..... ......+.+.+|+.+|+++ +||||++++++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 97 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDI 97 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeee
Confidence 44679999999999999999999765 89999999865322 1233457899999999999 79999999999
Q ss_pred EEe-----CCeEEEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCe
Q 040003 198 YED-----AVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 198 ~~~-----~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
+.. ...+|+|||||. |+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~~~~ 173 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNNDI 173 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCE
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cCCCCE
Confidence 844 347899999997 6888887654 469999999999999999999999999999999999999 677889
Q ss_pred EEEeeccccccCCCCceee-eeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 272 KTIDFGLSMFFRPGLTFRV-WLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 272 kl~DFGla~~~~~~~~~~~-~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
||+|||+++.......... ..+..| .+ +.++.+.++.+++.|..+|...
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 174 TICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp EECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred EEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 9999999986543322211 111112 11 1234578888888888877653
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=245.06 Aligned_cols=154 Identities=20% Similarity=0.365 Sum_probs=133.8
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCC-----eeEEEEEEE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN-----VIQIVGAYE 199 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-----iv~~~~~~~ 199 (489)
.+.+.|++.+.||+|+||+||+|++..+++.||||++... ......+.+|+.+++.+..|+| |+++++++.
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 4456799999999999999999999999999999999642 3455678889999999855664 999999999
Q ss_pred eCCeEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEeeeeCCCCCCeEEEe
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACH--SLGVMHRDLKPENFLFINQQEEAPLKTID 275 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH--~~~iiHrDlKp~Nill~~~~~~~~~kl~D 275 (489)
.....|||||||. ++|.+++... +.+++..++.++.|++.||.||| ..|||||||||+|||+.. +..+.+||+|
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~~~kL~D 204 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRSAIKIVD 204 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSCCEEECC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCCcEEEEe
Confidence 9999999999996 5999998765 45899999999999999999999 579999999999999953 3467899999
Q ss_pred eccccccCC
Q 040003 276 FGLSMFFRP 284 (489)
Q Consensus 276 FGla~~~~~ 284 (489)
||+|+....
T Consensus 205 FG~a~~~~~ 213 (382)
T 2vx3_A 205 FGSSCQLGQ 213 (382)
T ss_dssp CTTCEETTC
T ss_pred ccCceeccc
Confidence 999987643
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-28 Score=258.19 Aligned_cols=239 Identities=21% Similarity=0.256 Sum_probs=169.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCC---CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT---QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
.+.|++++.||+|+||.||+|.+..+ +..||+|.+... ......+.+.+|+.+|+++ +||||+++++++. .+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCc
Confidence 45699999999999999999998654 457999987543 3455667899999999999 8999999999985 457
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.|+|||||.+|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|+..
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl---~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCCCCCSC
T ss_pred eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE---eCCCCEEEEecCCCeec
Confidence 899999999999999997654 68999999999999999999999999999999999999 55678999999999887
Q ss_pred CCCCceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 283 RPGLTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
........ ..+..| ++. -++.+.++.+++. |..+|......+.. .+...........++.+-
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l 621 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 621 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHH
Confidence 54432211 111122 121 1244677777775 77666543210000 000000000112233332
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
...+. +++..|+..|++..|+...|..+
T Consensus 622 ~~li~---~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 622 YSLMT---KCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH---HHcCCChhHCcCHHHHHHHHHHH
Confidence 22222 56788888889988888877664
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-28 Score=237.10 Aligned_cols=237 Identities=19% Similarity=0.177 Sum_probs=170.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEEeCC---
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL-AGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~~--- 202 (489)
.+.|++.+.||+|+||.||+|.+ +++.||||++... ....+.+|++++..+ .+||||+++++++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 45699999999999999999987 5889999998543 235678899999983 27999999999998876
Q ss_pred -eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 203 -AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACH--------SLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 203 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH--------~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
.+|+||||+.+|+|.+++.. ..+++..+..++.|++.||.||| ++||+||||||+|||+ +.++.+||
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll---~~~~~~kL 188 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCI 188 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE---CTTSCEEE
T ss_pred ceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE---CCCCCEEE
Confidence 89999999999999999865 47899999999999999999999 8999999999999999 67789999
Q ss_pred EeeccccccCCCCceee------eeeccC---------------C----CCcchhHHHHHHHhcc----------cccCC
Q 040003 274 IDFGLSMFFRPGLTFRV------WLRLHF---------------L----FFQKQRQSVLQTRLVR----------NLNEP 318 (489)
Q Consensus 274 ~DFGla~~~~~~~~~~~------~~~~~y---------------p----f~~~~~~~~~~~i~~~----------~~~~~ 318 (489)
+|||++........... ..+..| + -+-++.+.++.+++.| ..+|.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~ 268 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence 99999987765443211 112222 0 1113447788899887 33443
Q ss_pred CCCCCCCC-------CCCCCcchhhhhh-ccHHHHHHHHHHH-hhhcCCCCCCccHHHHHHHHHHh
Q 040003 319 GSLWPDKV-------AVPPIGDRVIAES-LSEEEIAGLKEMF-KMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 319 ~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~l~~~F-~~~D~d~~g~i~~~el~~~l~~l 375 (489)
........ .........+... .+.+....+.++. .++..|++.|++..|+...|+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 269 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 22111100 0000000111111 1112223333333 56788889999999998888765
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=242.19 Aligned_cols=186 Identities=24% Similarity=0.353 Sum_probs=147.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe--
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA-- 203 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-- 203 (489)
+.+.|.+.+.||+|+||.||+|++..+|+.||||++.... ........+.+|+.+|+.+ +||||+++++++.....
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGG
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccc
Confidence 3467999999999999999999999999999999996543 3455567889999999999 79999999999987654
Q ss_pred ----EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 204 ----VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 204 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
+|+||||+. ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 100 NFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLA 173 (353)
T ss_dssp GCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTCCEEECSTTCT
T ss_pred cceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---CCCCcEEEeecccc
Confidence 599999997 58887663 359999999999999999999999999999999999999 67789999999999
Q ss_pred cccCCCCceeeeeeccC----------CC----CcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFRVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+........ ...+..| .+ +.++.+.++.+++.|..+|...
T Consensus 174 ~~~~~~~~~-~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 174 RHADAEMTG-YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp TC---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred cCCCCCccc-cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 876432211 1111111 11 1234577888888888877654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-28 Score=234.76 Aligned_cols=183 Identities=21% Similarity=0.247 Sum_probs=143.8
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
|.....||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.+ +||||+++++++.+.+..++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEE
Confidence 333458999999999999999999999999987542 23457788999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 210 LCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
|+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+.. .++.+||+|||++..+....
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEECCTTTCEESCC--
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEeecccccccCCCC
Confidence 999999999987652 4668889999999999999999999999999999999942 26789999999998765432
Q ss_pred ceee--eeeccC-----------CC----CcchhHHHHHHHhcccccCC
Q 040003 287 TFRV--WLRLHF-----------LF----FQKQRQSVLQTRLVRNLNEP 318 (489)
Q Consensus 287 ~~~~--~~~~~y-----------pf----~~~~~~~~~~~i~~~~~~~~ 318 (489)
.... ..+..| .+ +.++.+.++.+++.|..+|.
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 226 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTG
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence 1111 111111 01 11244678888888877764
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=261.22 Aligned_cols=227 Identities=20% Similarity=0.208 Sum_probs=165.3
Q ss_pred ccceeecceeccCCceEEEEEEEcC-CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe--
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKA-TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA-- 203 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-- 203 (489)
.+.|++.+.||+|+||+||+|++.. +++.||||++... ........+.+|+.+|+++ +|||||++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTS
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCC
Confidence 4679999999999999999999976 7899999998643 3455667889999999999 79999999999987665
Q ss_pred ---EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 204 ---VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 204 ---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.|||||||+|++|.+++.. .+++..+..++.||+.||.|||++|||||||||+|||+ +. +.+||+|||+++
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll---~~-~~~kl~DFG~a~ 229 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML---TE-EQLKLIDLGAVS 229 (681)
T ss_dssp CEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CS-SCEEECCCTTCE
T ss_pred CceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE---eC-CcEEEEecccch
Confidence 7999999999999987644 79999999999999999999999999999999999999 33 379999999998
Q ss_pred ccCCCCceeeeeeccC---------C---CCcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHH
Q 040003 281 FFRPGLTFRVWLRLHF---------L---FFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 281 ~~~~~~~~~~~~~~~y---------p---f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (489)
........ ..+..| + -+-++.+.++.+++.|...+....... +.. .......+..-...
T Consensus 230 ~~~~~~~~--~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---~~~---~~~~~~~~~~l~~l- 300 (681)
T 2pzi_A 230 RINSFGYL--YGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG---LPE---DDPVLKTYDSYGRL- 300 (681)
T ss_dssp ETTCCSCC--CCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS---CCT---TCHHHHHCHHHHHH-
T ss_pred hcccCCcc--CCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc---ccc---cccccccCHHHHHH-
Confidence 87654221 222223 1 112345778888888866655321111 110 00001112221122
Q ss_pred HHHHhhhcCCCCCCc-cHHHHHHHHH
Q 040003 349 KEMFKMIDTDNSGYI-TLEELKKGLQ 373 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i-~~~el~~~l~ 373 (489)
+-+++..|++.|+ +.+++...|.
T Consensus 301 --i~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 301 --LRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp --HHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred --HhhhccCChhhCCCHHHHHHHHHH
Confidence 2367889999998 4666665554
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=242.35 Aligned_cols=185 Identities=22% Similarity=0.254 Sum_probs=133.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA---- 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~---- 203 (489)
+.|++.+.||+|+||+||+|++..+++.||||++...... .....+|++.++.+ +||||++++++|.....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTT
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhc-CCCCcccHHHhhhcccccccc
Confidence 4699999999999999999999999999999998654322 23456788888888 89999999999976443
Q ss_pred ---EEEEEeecCCCchHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 204 ---VHVVMELCAGGELFDRII----QRGHYTERKAADLTRIIVGVVEACH--SLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 204 ---~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH--~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
+|+|||||.+ +|...+. ....+++..+..++.|++.||.||| ++||+||||||+|||+.. .++.+||+
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~--~~~~~kl~ 174 (360)
T 3e3p_A 98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE--ADGTLKLC 174 (360)
T ss_dssp CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET--TTTEEEEC
T ss_pred ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC--CCCcEEEe
Confidence 8999999986 4444443 3467899999999999999999999 999999999999999932 26789999
Q ss_pred eeccccccCCCCceee-eeeccC----------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 275 DFGLSMFFRPGLTFRV-WLRLHF----------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 275 DFGla~~~~~~~~~~~-~~~~~y----------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|||+|+.+........ ..+..| ++. -++.+.++.+++.|..+|...
T Consensus 175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 9999987764433211 111112 111 234577888888888777643
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=233.97 Aligned_cols=151 Identities=23% Similarity=0.443 Sum_probs=132.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG-HPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~~~~~l 206 (489)
+.|++++.||+|+||.||+|.+. +++.||+|++.... ......+.+.+|+.+++++.+ ||||+++++++.+....|+
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 45999999999999999999875 58899999997643 345667889999999999953 6999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||| +.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+. ++.+||+|||+++.+...
T Consensus 106 v~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCC----
T ss_pred EEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeeccccccccCc
Confidence 999 56889999999888899999999999999999999999999999999999993 367999999999876543
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=233.85 Aligned_cols=233 Identities=18% Similarity=0.149 Sum_probs=163.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHH-HHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR-IMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
+.|++++.||+|+||.||+|.+..+++.||||++... ........+.+|+. +++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST--VDEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECC--CCHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecc--cCchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEEeCCceEE
Confidence 5699999999999999999999999999999999754 23444556667777 55555 89999999999999999999
Q ss_pred EEeecCCCchHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 207 VMELCAGGELFDRIIQ-----RGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
|||||.+ +|.+++.. ...+++..+..++.|++.||.|||+. ||+||||||+|||+ +.++.+||+|||+++
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISG 174 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE---ETTTEEEECCCSSSC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE---cCCCCEEEccCCCce
Confidence 9999975 78777753 46789999999999999999999999 99999999999999 567889999999998
Q ss_pred ccCCCCceee-eeeccC-------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CC-CCC---cchhh
Q 040003 281 FFRPGLTFRV-WLRLHF-------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AV-PPI---GDRVI 336 (489)
Q Consensus 281 ~~~~~~~~~~-~~~~~y-------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~---~~~~~ 336 (489)
.+........ ..+..| ++ +.++.+.++.+++.|..+|......... .+ ... .....
T Consensus 175 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3aln_A 175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE 254 (327)
T ss_dssp C------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS
T ss_pred ecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc
Confidence 7654322111 111111 11 1234578899999999888642111000 00 000 00000
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
...++.+-...+. .++..|++.|++..|+..
T Consensus 255 ~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 255 EREFSPSFINFVN---LCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCHHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHH---HHhhCChhhCcCHHHHHh
Confidence 1123443333333 567888999999988753
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=235.46 Aligned_cols=188 Identities=21% Similarity=0.310 Sum_probs=148.4
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCC-cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCC------eeEEEEE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQ-KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPN------VIQIVGA 197 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn------iv~~~~~ 197 (489)
.+.+.|++++.||+|+||+||+|++..++ +.||+|++.. .....+.+.+|+.+++.+ +|++ ++.++++
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~ 90 (355)
T 2eu9_A 16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN----VGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDW 90 (355)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEE
T ss_pred eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc----cccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeee
Confidence 34567999999999999999999998877 6899999863 234567788999999999 4655 9999999
Q ss_pred EEeCCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC----------
Q 040003 198 YEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ---------- 265 (489)
Q Consensus 198 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~---------- 265 (489)
+...+..||||||| +++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+...
T Consensus 91 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 91 FNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccc
Confidence 99999999999999 667777776653 69999999999999999999999999999999999999432
Q ss_pred ------CCCCCeEEEeeccccccCCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 266 ------QEEAPLKTIDFGLSMFFRPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 266 ------~~~~~~kl~DFGla~~~~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
+..+.+||+|||+++........ ...+..| ++. .++.+.++.+++.|..+|..
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSCCCS-SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccCCCcEEEeecCccccccccccC-CcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 24678999999999875433221 1112222 111 12446777788888777754
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=235.86 Aligned_cols=144 Identities=21% Similarity=0.306 Sum_probs=120.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHH--HHHhcCCCCeeEEEEEEEe-----
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI--MHHLAGHPNVIQIVGAYED----- 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~--l~~l~~hpniv~~~~~~~~----- 200 (489)
+.|++++.||+|+||+||+|++ +++.||||++.... ...+..|.++ +..+ +||||+++++.+..
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTS
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhc-cCcchhhheecccccccCC
Confidence 4599999999999999999976 68899999986432 2334444444 4446 89999999986543
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEeeeeCCCCCCe
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSL---------GVMHRDLKPENFLFINQQEEAPL 271 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---------~iiHrDlKp~Nill~~~~~~~~~ 271 (489)
...+|+|||||++|+|.+++... ..++..+..++.||+.||.|||+. |||||||||+|||+ +.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill---~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE---CTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE---cCCCcE
Confidence 33679999999999999998654 558899999999999999999999 99999999999999 677899
Q ss_pred EEEeeccccccCC
Q 040003 272 KTIDFGLSMFFRP 284 (489)
Q Consensus 272 kl~DFGla~~~~~ 284 (489)
||+|||+|+.+..
T Consensus 160 kL~DFG~a~~~~~ 172 (336)
T 3g2f_A 160 VISDFGLSMRLTG 172 (336)
T ss_dssp EECCCTTCEECSS
T ss_pred EEeeccceeeccc
Confidence 9999999987754
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=239.53 Aligned_cols=237 Identities=19% Similarity=0.238 Sum_probs=164.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.+.||+|+||.||+|.+.. .+|+|++..... .....+.+.+|+.+++++ +||||+++++++.+...+++|
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEE
T ss_pred HHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEE
Confidence 459999999999999999998754 499999875432 222335677899999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||.+++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ + ++.+||+|||+++......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~---~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY---D-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE---C---CCEECCCSCCC------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE---e-CCCEEEeecCCcccccccc
Confidence 99999999999987654 68999999999999999999999999999999999999 4 4689999999987653211
Q ss_pred cee-------eeeeccC------------------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC-CCCcchh
Q 040003 287 TFR-------VWLRLHF------------------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-PPIGDRV 335 (489)
Q Consensus 287 ~~~-------~~~~~~y------------------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~ 335 (489)
... ...+..| ++. -++.+.++.+++.|..+|......... .+ .......
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 263 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL 263 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCC
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCC
Confidence 100 0011111 111 124467888888888777543211000 00 0000000
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
....++.+-...+ -.+++.|+..|++..|+...|..+.
T Consensus 264 ~~~~~~~~l~~li---~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 264 SQIGMGKEISDIL---LFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp CCSSCCTTHHHHH---HHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred CcCCCCHHHHHHH---HHHhcCChhhCcCHHHHHHHHHHHH
Confidence 0011222222222 3567888999999999988887764
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.6e-27 Score=227.74 Aligned_cols=233 Identities=18% Similarity=0.140 Sum_probs=150.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||.||+|.+..+++.||||++..... .....+.+..+..+++.+ +||||+++++++.+....|+|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEE
Confidence 569999999999999999999999999999999975432 222233344444566666 899999999999999999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||+ ++.+..+... .+.+++..+..++.|++.||.|||+. ||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCCTTC------
T ss_pred Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEECCCchhccCC
Confidence 9999 5555554433 46799999999999999999999995 99999999999999 67788999999999876543
Q ss_pred Cceee-eeeccC----------------CC--CcchhHHHHHHHhcccccCCCCCCCCCC---CCCCCcchh-hhhhccH
Q 040003 286 LTFRV-WLRLHF----------------LF--FQKQRQSVLQTRLVRNLNEPGSLWPDKV---AVPPIGDRV-IAESLSE 342 (489)
Q Consensus 286 ~~~~~-~~~~~y----------------pf--~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~ 342 (489)
..... ..+..| .+ +-++.+.++.+++.|..+|......... ......... ....++.
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (318)
T 2dyl_A 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSG 258 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCH
T ss_pred ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCH
Confidence 32211 111111 11 1134577888888888777542110000 000000000 0012233
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+-...+. .++..|+..|++.+|+.
T Consensus 259 ~l~~li~---~~l~~dp~~Rps~~~ll 282 (318)
T 2dyl_A 259 DFQSFVK---DCLTKDHRKRPKYNKLL 282 (318)
T ss_dssp HHHHHHH---HHTCSCTTTSCCHHHHT
T ss_pred HHHHHHH---HHccCChhHCcCHHHHh
Confidence 3333333 56788888888888864
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-28 Score=256.64 Aligned_cols=189 Identities=23% Similarity=0.273 Sum_probs=153.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe------C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED------A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~ 201 (489)
+.|++.++||+|+||.||+|.+..+|+.||||++... ......+.+.+|+++|+++ +||||+++++++.. .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTT
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCC
Confidence 5699999999999999999999999999999998653 3456678899999999999 89999999998765 6
Q ss_pred CeEEEEEeecCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG---HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
...|+|||||.||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||+..++....+||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 78899999999999999997654 588999999999999999999999999999999999996544455699999999
Q ss_pred ccccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
+..+..+..... ..+..| ++. -++.+.++.+++.|..+|..
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 998765433221 222222 121 23558899999999888854
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=238.52 Aligned_cols=187 Identities=19% Similarity=0.288 Sum_probs=148.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc----------CCCCeeEEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA----------GHPNVIQIVGA 197 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~----------~hpniv~~~~~ 197 (489)
+.|++++.||+|+||+||+|.+..+++.||||++.. .....+.+.+|+.+++++. .||||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG----DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC----CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 469999999999999999999999999999999864 2345567889999999883 28999999999
Q ss_pred EEeCC----eEEEEEeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEeeeeC---CC
Q 040003 198 YEDAV----AVHVVMELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSL-GVMHRDLKPENFLFINQ---QE 267 (489)
Q Consensus 198 ~~~~~----~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~iiHrDlKp~Nill~~~---~~ 267 (489)
+...+ .+++||||+ +++|.+++... +.+++..+..++.||+.||.|||++ |||||||||+|||+... +.
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcC
Confidence 98654 799999999 89999998763 4599999999999999999999998 99999999999999542 23
Q ss_pred CCCeEEEeeccccccCCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 268 EAPLKTIDFGLSMFFRPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 268 ~~~~kl~DFGla~~~~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
.+.+||+|||+|+........ ...+..| ++. -++.+.++.+++.|..+|...
T Consensus 174 ~~~~kl~Dfg~a~~~~~~~~~-~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEHYTN-SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp EEEEEECCCTTCEETTBCCCS-CCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred cceEEEcccccccccCCCCCC-CCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 447999999999876533221 1222222 222 234578888999998888643
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-27 Score=243.09 Aligned_cols=230 Identities=20% Similarity=0.165 Sum_probs=157.5
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|.+.+.||+|+||+||. ....+++.||||++..... ..+.+|+++|+.+.+|||||++++++.+....||||
T Consensus 25 ~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 499999999999999764 3456889999999865322 235689999999867999999999999999999999
Q ss_pred eecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeeccccccCCC
Q 040003 209 ELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~~~~ 285 (489)
|||. |+|.+++.... ...+..+..++.||+.||.|||++|||||||||+|||+... +....+||+|||+|+.+..+
T Consensus 98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 9996 69999987653 35556678899999999999999999999999999999532 23446889999999877543
Q ss_pred Ccee-----eeeeccC------------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhh--hhc
Q 040003 286 LTFR-----VWLRLHF------------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIA--ESL 340 (489)
Q Consensus 286 ~~~~-----~~~~~~y------------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~ 340 (489)
.... ...+..| .+ +.++.++++.+++. |..+|......... ........... ...
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE 256 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHH
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccc
Confidence 2110 1122222 11 12355788888888 77777543211000 00000000000 111
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+..-.+. +-+++..|+..|++..|+.
T Consensus 257 ~~~~~~l---i~~~L~~dP~~Rps~~evl 282 (432)
T 3p23_A 257 DVIAREL---IEKMIAMDPQKRPSAKHVL 282 (432)
T ss_dssp HHHHHHH---HHHHSCSSGGGSCCHHHHH
T ss_pred cHHHHHH---HHHHHhCCHhhCCCHHHHH
Confidence 1111122 2367889999999998875
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-27 Score=238.35 Aligned_cols=232 Identities=23% Similarity=0.214 Sum_probs=159.0
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|.+.+.||+|+||+||.+ ...+|+.||||++... ..+.+.+|+.+|+++.+|||||++++++.+...+|
T Consensus 13 l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 85 (434)
T 2rio_A 13 LKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLY 85 (434)
T ss_dssp CSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred hhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEE
Confidence 4456888899999999999875 4567999999998643 23567899999998767999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCC-------HHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC----------CCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYT-------ERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ----------QEE 268 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~-------~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~----------~~~ 268 (489)
||||||. |+|.+++...+... +..+..++.||+.||.|||++|||||||||+|||+... +..
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCc
Confidence 9999995 69999987654332 22356799999999999999999999999999999542 235
Q ss_pred CCeEEEeeccccccCCCCcee------eeeeccC----------------CC----CcchhHHHHHHHhc-ccccCCCCC
Q 040003 269 APLKTIDFGLSMFFRPGLTFR------VWLRLHF----------------LF----FQKQRQSVLQTRLV-RNLNEPGSL 321 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~------~~~~~~y----------------pf----~~~~~~~~~~~i~~-~~~~~~~~~ 321 (489)
..+||+|||+|+.+..+.... ...+..| .+ +.++.++++.+++. |..+|....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 689999999999876543211 1122222 11 11345788888887 887775432
Q ss_pred CCCCC------CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 322 WPDKV------AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 322 ~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
..... ..... .......++.+-.+.+ -+++..|+..|++..|+.
T Consensus 245 ~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~li---~~~L~~dP~~Rps~~eil 294 (434)
T 2rio_A 245 SRESNIIRGIFSLDEM-KCLHDRSLIAEATDLI---SQMIDHDPLKRPTAMKVL 294 (434)
T ss_dssp THHHHHHHTCCCCCCC-TTCCCHHHHHHHHHHH---HHHTCSSGGGSCCHHHHH
T ss_pred hhHHHHhcCCCCcccc-cccccccchHHHHHHH---HHHhhCChhhCCCHHHHH
Confidence 11000 00000 0000112222222222 367889999999999875
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-26 Score=196.47 Aligned_cols=142 Identities=35% Similarity=0.662 Sum_probs=132.4
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~~ 417 (489)
.++++++.+|+++|..+|.|++|.|+.+||..+++.+|..+++.++..++..+|.+++|.|+|.||+..+... .....+
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 82 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE 82 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence 4788999999999999999999999999999999999999999999999999999999999999999888654 334457
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.++.+|+.||.|++|+|+.+||+.+|..+| +++.+++++|+.+|.|+||.|+|+||+++|.+
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 8899999999999999999999999999988 78999999999999999999999999999864
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=204.84 Aligned_cols=143 Identities=34% Similarity=0.624 Sum_probs=132.2
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~ 416 (489)
..++++++.+|+++|..+|.|++|+|+.+||..+|+.+|..+++.++..++..+|.|++|.|+|.||+..+.... ....
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 468888999999999999999999999999999999999999999999999999999999999999998875433 3345
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
++.+..+|+.||+|++|+|+.+||+.+|..+| ++++++++||+.+| |+||+|+|+||+++|.+.
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~ 148 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKG 148 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence 77899999999999999999999999999988 78999999999999 999999999999999753
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=197.08 Aligned_cols=144 Identities=21% Similarity=0.392 Sum_probs=129.2
Q ss_pred hccHHHHHHHHHHHhhhcC--CCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh---
Q 040003 339 SLSEEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK--- 413 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~--d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~--- 413 (489)
.++++++.+++++|..||. |++|+|+..||..+|+.+|.++++.++..++. .|.+++|.|+|+||+.++.....
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence 4789999999999999995 89999999999999999999999999998764 57788999999999998865432
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcC--CCCCceeHHHHHHHHHhCCC
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQ--DNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~--d~dG~I~~~eF~~~~~~~~~ 483 (489)
...++.++.+|+.||+|++|+|+.+||+.+|..+| ++++++++|++.+|. |+||+|+|+||+++|...++
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~p~ 154 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPF 154 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHCSC
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCCCC
Confidence 34467899999999999999999999999999998 799999999999995 88999999999999986544
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=191.17 Aligned_cols=139 Identities=29% Similarity=0.606 Sum_probs=127.7
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhhHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQREDH 419 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~~~~ 419 (489)
+++++.+++++|..+|.|++|+|+.+||..+|+.+|..++..++..+++.+|.|++|.|+|+||+.++.... .....+.
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 80 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999999998876432 2334577
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
+..+|+.||+|++|+|+.+||+.++..+| +++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus 81 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 89999999999999999999999999988 7899999999999999999999999999885
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=217.35 Aligned_cols=143 Identities=38% Similarity=0.713 Sum_probs=131.5
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQ 415 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~ 415 (489)
.+.++++++.+|+++|+.+|.|++|.|+.+||+.+|+.+|..+++.++..+|+.+|.|++|.|+|+||+.++... ....
T Consensus 293 ~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d 372 (440)
T 3u0k_A 293 RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD 372 (440)
T ss_dssp CBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred HhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 357899999999999999999999999999999999999999999999999999999999999999999888653 3344
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.+++++++|+.||+|++|+|+.+||+.+|..+| ++++++++||+.+|.|+||+|+|+||+++|.
T Consensus 373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 567899999999999999999999999999988 7899999999999999999999999999984
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-25 Score=223.27 Aligned_cols=228 Identities=11% Similarity=0.051 Sum_probs=151.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-CCe---------------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-PNV--------------- 191 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pni--------------- 191 (489)
..|.+++.||+|+||+||+|++..+|+.||||++...........+.+.+|+.+++.+ .| .|+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhh
Confidence 3488899999999999999999999999999998754444444567899999999988 45 321
Q ss_pred ------eEEEEEEEe-----CCeEEEEEeecCCCchHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 040003 192 ------IQIVGAYED-----AVAVHVVMELCAGGELFDRIIQ-------RGHYTERKAADLTRIIVGVVEACHSLGVMHR 253 (489)
Q Consensus 192 ------v~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~-------~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHr 253 (489)
..++.++.. ...++++|+++ +++|.+++.. .+.+++..+..++.||+.||.|||++|||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 111121222 23467888876 6799988742 2236677888889999999999999999999
Q ss_pred CCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceeeeeeccC-----------------------CCCcchhHHHHHHH
Q 040003 254 DLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLHF-----------------------LFFQKQRQSVLQTR 310 (489)
Q Consensus 254 DlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~y-----------------------pf~~~~~~~~~~~i 310 (489)
||||+|||+ +.++.+||+|||+|+...... ...+. ..| .-+-++.+.++.++
T Consensus 236 DiKp~NILl---~~~~~~kL~DFG~a~~~~~~~-~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 236 YLRPVDIVL---DQRGGVFLTGFEHLVRDGASA-VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp CCCGGGEEE---CTTCCEEECCGGGCEETTEEE-CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred CcccceEEE---ecCCeEEEEeccceeecCCcc-ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 999999999 777889999999988654321 11111 222 01113457888999
Q ss_pred hcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 311 LVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+.|..+|........ ...... ....++.+-...+. +++..|++.|++..|+.
T Consensus 311 ltg~~Pf~~~~~~~~--~~~~~~--~~~~~~~~~~~li~---~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 311 WCADLPNTDDAALGG--SEWIFR--SCKNIPQPVRALLE---GFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHSSCCCCTTGGGSC--SGGGGS--SCCCCCHHHHHHHH---HHTCSSGGGSCCHHHHT
T ss_pred HHCCCCCCCcchhhh--HHHHHh--hcccCCHHHHHHHH---HHccCChhhCcCHHHHH
Confidence 999888865422110 000000 00123333333333 56788888888877753
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=186.42 Aligned_cols=142 Identities=38% Similarity=0.697 Sum_probs=131.1
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~~ 417 (489)
.++.+++.+++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++..+|.|++|.|+|+||+.++... .....+
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 82 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence 4678889999999999999999999999999999999999999999999999999999999999999888653 233456
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+..+|+.||+|++|+|+.+||+.+|..+| +++++++++++.+|.|+||+|+|+||+.+|..
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 7889999999999999999999999999998 78999999999999999999999999999863
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-25 Score=213.36 Aligned_cols=138 Identities=22% Similarity=0.327 Sum_probs=110.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---------------HHHHHHHHHHHHHHHhcCCCCeeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---------------EDVEDVRREIRIMHHLAGHPNVIQ 193 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---------------~~~~~~~~E~~~l~~l~~hpniv~ 193 (489)
.|.+++.||+|+||.||+|.+ .+|+.||+|+++....... .....+.+|+++|+++. | ++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~---~~ 165 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-G---LA 165 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-T---SS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-C---CC
Confidence 366779999999999999999 8899999999864321111 24567899999999994 4 55
Q ss_pred EEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 194 IVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 194 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
+.+++.. +..|+|||||+|++|.+ +. . .....++.|++.||.|||++|||||||||+|||+ + ++.+||
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~----~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl---~-~~~vkl 233 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VR----V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---S-EEGIWI 233 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CC----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---E-TTEEEE
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cc----h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE---E-CCcEEE
Confidence 5554443 45699999999999987 41 1 2345799999999999999999999999999999 4 678999
Q ss_pred EeeccccccC
Q 040003 274 IDFGLSMFFR 283 (489)
Q Consensus 274 ~DFGla~~~~ 283 (489)
+|||+|+...
T Consensus 234 ~DFG~a~~~~ 243 (282)
T 1zar_A 234 IDFPQSVEVG 243 (282)
T ss_dssp CCCTTCEETT
T ss_pred EECCCCeECC
Confidence 9999998654
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-25 Score=189.93 Aligned_cols=139 Identities=26% Similarity=0.541 Sum_probs=126.4
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~ 416 (489)
..++++++.+|+++|..+|.|++|+|+.+||..+|+.+|..+++.++..++.. .++.|+|+||+..+.... ....
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~----~~~~i~f~ef~~~~~~~~~~~~~ 83 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKE----CPGQLNFTAFLTLFGEKVSGTDP 83 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHT----SSSCCCSHHHHHTTTTTTTTCCC
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHh----ccCCccHHHHHHHHHhhhccccc
Confidence 36899999999999999999999999999999999999999999999888864 567899999998886543 3345
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
++.++.+|+.||+|++|+|+.+||+.+|..+| ++++++++|++.+|.| ||+|+|+||+++|.+.
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 78899999999999999999999999999998 8999999999999988 9999999999999864
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-25 Score=228.47 Aligned_cols=139 Identities=22% Similarity=0.185 Sum_probs=109.0
Q ss_pred eecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH-----HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE-----EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
...+.||+|+||+||+|. ..++.+|+|.+..+..... ...+++.+|+++|+++ +||||+++..++......|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccE
Confidence 345689999999999994 4578899998765443322 1245689999999999 7999996655666777889
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||||+|++|.+++.. +..++.|++.+|+|||++|||||||||+|||+ +. .+||+|||+|+.+...
T Consensus 416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl---~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF---DK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE---SS--SEEECCCTTCEECCCH
T ss_pred EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE---CC--eEEEEECccCEECCCc
Confidence 99999999999998754 56899999999999999999999999999999 44 8999999999987543
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-25 Score=199.19 Aligned_cols=153 Identities=31% Similarity=0.578 Sum_probs=127.1
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
++.....+...++.+++..++++|..+|.|++|.|+.+||..+|..+|...++.++..+|+.+|.|++|.|+|+||+.++
T Consensus 40 k~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~ 119 (197)
T 3pm8_A 40 KKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAAT 119 (197)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTT
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 33444566778899999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc--C--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 409 LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF--G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 409 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~--g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
........++.+..+|+.||.|++|+|+.+||+.++..+ | +++++++++|+.+|.|+||.|+|+||+.+|++.
T Consensus 120 ~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 120 IDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp CCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred HHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence 666556667899999999999999999999999999887 4 678899999999999999999999999999864
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=181.73 Aligned_cols=145 Identities=32% Similarity=0.522 Sum_probs=134.3
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhh
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKI 414 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~ 414 (489)
....++.+++.+++.+|..+|.|++|.|+.+||..+|+.+|..++..++..++..+|.+++|.|+|+||+.++... ...
T Consensus 13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 92 (161)
T 3fwb_A 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR 92 (161)
T ss_dssp TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence 3457899999999999999999999999999999999999999999999999999999999999999999988653 333
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...+.+..+|+.+|.|++|+|+.+||+.+|..+| +++++++.+++.+|.|++|.|+|+||+.+|.+
T Consensus 93 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 93 DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 4567899999999999999999999999999988 78999999999999999999999999999975
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=184.06 Aligned_cols=145 Identities=33% Similarity=0.588 Sum_probs=132.0
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~ 416 (489)
..++.+++.+++++|..+|.|++|.|+.+||..+|+.+|..++..++..++..+|.|++|.|+|+||+.++.... ....
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence 467889999999999999999999999999999999999999999999999999999999999999999886533 3334
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.+.+..+|+.+|.|++|+|+.+||+.++..+| +++++++.+++.+|.|+||.|+|+||+.+|++.+
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 167 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence 67888999999999999999999999999998 7899999999999999999999999999998754
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=182.14 Aligned_cols=142 Identities=34% Similarity=0.581 Sum_probs=130.3
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhh--
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQ-- 415 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~-- 415 (489)
..++++++.+++++|..+|.|++|.|+.+||..+|+.+|..++..++..++..+|.+++|.|+|+||+..+.......
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 82 (153)
T 3ox6_A 3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETA 82 (153)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccc
Confidence 468899999999999999999999999999999999999999999999999999999999999999999886433221
Q ss_pred ---hHHHHHhhcccccccCCCcccHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 416 ---REDHMYAAFSYFDKDGSGYITPDELQTACQQ-FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 416 ---~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
..+.+..+|+.+|.|++|+|+.+||+.++.. +| +++++++.+++.+|.|+||.|+|+||+.+|+
T Consensus 83 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 83 DMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 2567899999999999999999999999988 77 7899999999999999999999999999875
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-23 Score=177.72 Aligned_cols=142 Identities=34% Similarity=0.621 Sum_probs=130.4
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQ 415 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~ 415 (489)
...++.+++.+++.+|..+|.|++|.|+.+||..++..+|..++..++..++..+|.+++|.|+|+||+..+.... ...
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 81 (147)
T 4ds7_A 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND 81 (147)
T ss_dssp --CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence 3468889999999999999999999999999999999999999999999999999999999999999999886543 234
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
..+.+..+|+.+|.|++|+|+.+||+.++..+| ++++++..+++.+| |+||.|+|+||+.+|+
T Consensus 82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 567889999999999999999999999999998 78999999999999 9999999999999875
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=182.85 Aligned_cols=144 Identities=25% Similarity=0.475 Sum_probs=132.1
Q ss_pred hhccHHHHHHHHHHHhhhc-CCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh--
Q 040003 338 ESLSEEEIAGLKEMFKMID-TDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI-- 414 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D-~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~-- 414 (489)
..++++++.+++.+|..+| .|++|.|+.+||..+|+.+|..++..++..+++.+|.|++|.|+|+||+.++......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence 4578889999999999999 9999999999999999999999999999999999999999999999999988654322
Q ss_pred ---hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 415 ---QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 415 ---~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.....+..+|+.+|+|++|+|+.+||+.++..+| ++++++..+++.+|.|+||.|+|+||+.+|...
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 156 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 156 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSSC
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcc
Confidence 3456788999999999999999999999999988 789999999999999999999999999998753
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=178.98 Aligned_cols=137 Identities=26% Similarity=0.578 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH-hhhhhhHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH-LNKIQREDHM 420 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~-~~~~~~~~~l 420 (489)
++++.+++.+|..+|.|++|.|+.+||..+|+.+|..++..++..+++.+|.|++|.|+|+||+.++.. .......+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL 81 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999998875 2333456789
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
..+|+.+|.|++|+|+.+||+.++..+| +++++++.+++.+| |+||.|+|+||+.+|.
T Consensus 82 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 82 RQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 9999999999999999999999999998 78999999999999 9999999999998764
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=181.07 Aligned_cols=143 Identities=24% Similarity=0.451 Sum_probs=132.1
Q ss_pred hccHHHHHHHHHHHhhhcC--CCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh--h
Q 040003 339 SLSEEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK--I 414 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~--d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~--~ 414 (489)
.++++++.+++.+|..+|. |++|+|+.+||..+|+.+|..++..++..+ ..+|.|++|.|+|+||+.++..... .
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 4678899999999999999 999999999999999999999999999999 9999999999999999998876543 4
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHH--hcCCCCCceeHHHHHHHHHhCC
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIRE--VDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~--~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
...+.+..+|+.||.|++|+|+.+||+.++..+| ++++++..+++. +|.|++|.|+|+||+.+|...+
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 152 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 152 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcCC
Confidence 4567899999999999999999999999999998 789999999999 9999999999999999998754
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=181.42 Aligned_cols=145 Identities=33% Similarity=0.596 Sum_probs=132.3
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCC-CCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh--
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDN-SGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-- 412 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~-~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-- 412 (489)
....++++++.+++.+|..+|.|+ +|.|+.+||..+|+.+|..++..++..+++.+|.|++|.|+|+||+.++....
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 345788999999999999999999 99999999999999999999999999999999999999999999999886643
Q ss_pred --hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 413 --KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 413 --~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.....+.+..+|+.+|.|++|+|+.+||+.++..+| ++++++..+++.+|.|+||.|+|+||+.+|..
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 234567789999999999999999999999999888 78999999999999999999999999999974
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-24 Score=182.55 Aligned_cols=136 Identities=20% Similarity=0.453 Sum_probs=122.1
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHcc-CCCCCcceehHHHHHHHHHh------hhhhhH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG-DIDNSGTMDYGEFIAAMLHL------NKIQRE 417 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~-D~d~~g~I~f~eF~~~~~~~------~~~~~~ 417 (489)
+.+++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++..+ |.|++|.|+|+||+.++... ......
T Consensus 3 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 82 (148)
T 1m45_A 3 TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKT 82 (148)
T ss_dssp CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccH
Confidence 34567889999999999999999999999999999999999999999 99999999999999988765 333456
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+..+|+.||.|++|+|+.+||+.++..+| ++++++..+++.+|.|+||.|+|+||+.+|..
T Consensus 83 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 83 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 7899999999999999999999999999998 78999999999999999999999999999864
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=193.85 Aligned_cols=149 Identities=20% Similarity=0.276 Sum_probs=133.1
Q ss_pred chhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
...+...++.+++.+++++|..+|.|++|+|+.+||..+|+.+|..++..++..+++.+|.|++|.|+|+||+.++...
T Consensus 38 ~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~- 116 (220)
T 3sjs_A 38 WFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM- 116 (220)
T ss_dssp TGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-
T ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-
Confidence 3445568999999999999999999999999999999999999999999999999999999999999999999988653
Q ss_pred hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcccc
Q 040003 413 KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVF 488 (489)
Q Consensus 413 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~f 488 (489)
+.+..+|+.+|+|++|+|+.+||+.++..+| +++++++.+++.+| |+||.|+|+||+.+|.......++|
T Consensus 117 -----~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~~~~~F 188 (220)
T 3sjs_A 117 -----ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFAAQTRSAY 188 (220)
T ss_dssp -----HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999988 78999999999999 9999999999999997655444444
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-23 Score=183.22 Aligned_cols=144 Identities=38% Similarity=0.707 Sum_probs=129.0
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~ 416 (489)
..++.+++.+++.+|..+|.|++|.|+.+||..+|+.+|..++..++..+++.+|.|++|.|+|+||+..+.... ....
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~ 82 (179)
T 2f2o_A 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82 (179)
T ss_dssp ---CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCccc
Confidence 356778899999999999999999999999999999999999999999999999999999999999998886542 3345
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+.+..+|+.+|.|++|+|+.+||+.++..+| ++++++..+|+.+|.|+||.|+|+||+.+|...
T Consensus 83 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 67789999999999999999999999999988 789999999999999999999999999999754
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=184.28 Aligned_cols=150 Identities=75% Similarity=1.172 Sum_probs=128.3
Q ss_pred chhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
...+...++.+++.+++.+|..+|.|++|.|+.+||..++..+|..++..++..+++.+|.|++|.|+|+||+..+....
T Consensus 14 ~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 93 (166)
T 2aao_A 14 LRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLN 93 (166)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 34455678899999999999999999999999999999999999999999999999999999999999999999886554
Q ss_pred hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 413 KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 413 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.....+.+..+|+.+|.|++|+|+.+||+.++..+|+++++++.+++.+|.|+||.|+|+||+.+|....
T Consensus 94 ~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 163 (166)
T 2aao_A 94 KIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGS 163 (166)
T ss_dssp HHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHHHHHCTTCSSSBCHHHHHHHHC---
T ss_pred hcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence 4455678999999999999999999999999999999999999999999999999999999999997653
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-23 Score=177.62 Aligned_cols=138 Identities=29% Similarity=0.596 Sum_probs=126.3
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhhHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQRED 418 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~~~ 418 (489)
++.+++.+++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++.. ++|.|+|+||+.++... ......+
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~ 76 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED 76 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 467889999999999999999999999999999999999999999888865 78999999999988754 3334567
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+..+|+.||.|++|+|+.+||+.+|..+| +++++++.+++.+|.|+||.|+|+||+.+|...
T Consensus 77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 141 (143)
T 3j04_B 77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG 141 (143)
T ss_dssp HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSS
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcc
Confidence 899999999999999999999999999988 789999999999999999999999999999865
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=177.82 Aligned_cols=145 Identities=36% Similarity=0.630 Sum_probs=133.0
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh-hh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK-IQ 415 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~-~~ 415 (489)
...++++++.+++++|..+|.|++|.|+..||..++..+|..++..++..++..+|.|++|.|+|+||+..+..... ..
T Consensus 11 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 90 (162)
T 1top_A 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA 90 (162)
T ss_dssp HHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcccc
Confidence 45688999999999999999999999999999999999999999999999999999999999999999988865432 12
Q ss_pred ---hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 ---REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ---~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+.+..+|+.+|.|++|+|+.+||+.++..+| ++++++..+++.+|.|+||.|+|+||+.+|...
T Consensus 91 ~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 466789999999999999999999999999988 789999999999999999999999999999753
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=173.59 Aligned_cols=139 Identities=20% Similarity=0.449 Sum_probs=128.4
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHcc---CCCCCcceehHHHHHHHHHh---hh
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG---DIDNSGTMDYGEFIAAMLHL---NK 413 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~---D~d~~g~I~f~eF~~~~~~~---~~ 413 (489)
++++++.+++.+|..+|.|++|+|+.+||..+|..+|..++..++..+++.+ |.++ |.|+|+||+..+... ..
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~ 80 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD 80 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence 5778899999999999999999999999999999999999999999999999 9999 999999999988654 22
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
......+..+|+.+|.|++|+|+.+||+.++..+| ++++++..+++. |.|+||.|+|+||+.+|..
T Consensus 81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 34567889999999999999999999999999988 789999999999 9999999999999999864
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-23 Score=186.19 Aligned_cols=149 Identities=38% Similarity=0.616 Sum_probs=131.9
Q ss_pred CCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
++.....+...++.+++.+++++|..+|.|++|+|+.+||..+|+.+|...+ .++..+++.+|.|++|.|+|+||+.++
T Consensus 35 ~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~ 113 (191)
T 3k21_A 35 QKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAA 113 (191)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 3444556677889999999999999999999999999999999999998888 889999999999999999999999987
Q ss_pred HHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC----CCH---HHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 409 LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG----LDD---TQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 409 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~---~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.... ...++.+..+|+.||.|++|+|+.+||+.++...+ +++ ++++++|+.+|.|+||.|+|+||+.+|+
T Consensus 114 ~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 114 LDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp SCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred Hhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 5433 24567889999999999999999999999998843 554 4689999999999999999999999985
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-23 Score=196.55 Aligned_cols=143 Identities=17% Similarity=0.175 Sum_probs=109.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcE--EEEEEeecccCCC---------------------HHHHHHHHHHHHHHHHh
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKE--FACKSIAKRKLTT---------------------EEDVEDVRREIRIMHHL 185 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~--~avK~i~~~~~~~---------------------~~~~~~~~~E~~~l~~l 185 (489)
.|.+.+.||+|+||.||+|.+..+|+. ||||+++...... ......+.+|+.+|..|
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378899999999999999998778999 9999975432110 01124678999999999
Q ss_pred cCCCCe--eEEEEEEEeCCeEEEEEeecCC-C----chHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCC
Q 040003 186 AGHPNV--IQIVGAYEDAVAVHVVMELCAG-G----ELFDRIIQRGHYTERKAADLTRIIVGVVEACH-SLGVMHRDLKP 257 (489)
Q Consensus 186 ~~hpni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~iiHrDlKp 257 (489)
.|++| +.++++ ...+||||||.+ | +|.+.... .++..+..++.|++.+|.||| ++|||||||||
T Consensus 128 -~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp 199 (258)
T 1zth_A 128 -KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSE 199 (258)
T ss_dssp -HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred -HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence 57653 444442 356899999942 3 56554322 234567889999999999999 99999999999
Q ss_pred CCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 258 ENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 258 ~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
+|||+ +. .+||+|||+|.....
T Consensus 200 ~NILl---~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 200 YNIMY---ID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp TSEEE---SS--SEEECCCTTCEETTS
T ss_pred HHEEE---cC--cEEEEECcccccCCC
Confidence 99999 44 799999999976643
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-24 Score=193.05 Aligned_cols=143 Identities=69% Similarity=1.143 Sum_probs=130.2
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED 418 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~ 418 (489)
.++.+++.+++.+|..+|.|++|.|+.+||..+|..+|..+++.++..+|+.+|.|++|.|+|+||+.++........++
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~ 82 (188)
T 1s6i_A 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREE 82 (188)
T ss_dssp SSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHH
Confidence 35566777899999999999999999999999999999999999999999999999999999999999886554434456
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+..+|+.||.|++|+|+.+||+.++..+|+++++++++|+.+|.|+||.|+|+||+.+|...
T Consensus 83 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 145 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR 145 (188)
T ss_dssp STHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHc
Confidence 688999999999999999999999999999999999999999999999999999999999643
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=180.22 Aligned_cols=143 Identities=13% Similarity=0.214 Sum_probs=129.6
Q ss_pred hhccHHHHHHHHHHHhhh-cCCCCCCccHHHHHHHHHHh----CCCCCHHHHHHHH-----------HccCCCCCcceeh
Q 040003 338 ESLSEEEIAGLKEMFKMI-DTDNSGYITLEELKKGLQRV----GANLMDSEIDGLM-----------QAGDIDNSGTMDY 401 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~-D~d~~g~i~~~el~~~l~~l----g~~~~~~~i~~l~-----------~~~D~d~~g~I~f 401 (489)
..++.++..+++.+|..+ |.|++|+|+.+||..++..+ |..++..++..++ +.+|.|++|.|+|
T Consensus 4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~ 83 (191)
T 2ccm_A 4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK 83 (191)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence 456788899999999999 99999999999999999998 8888888888888 9999999999999
Q ss_pred HHHHHHHHHhhh---------hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHH
Q 040003 402 GEFIAAMLHLNK---------IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYS 472 (489)
Q Consensus 402 ~eF~~~~~~~~~---------~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~ 472 (489)
+||+.++..... ......+..+|+.+|+|++|+|+.+||+.++..+|+++++++.+|+.+|.|+||.|+|+
T Consensus 84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~ 163 (191)
T 2ccm_A 84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTRE 163 (191)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCBHH
T ss_pred HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcCHH
Confidence 999998865421 22356788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 040003 473 EFVAMMQD 480 (489)
Q Consensus 473 eF~~~~~~ 480 (489)
||+.+|..
T Consensus 164 Ef~~~~~~ 171 (191)
T 2ccm_A 164 IFARLWTE 171 (191)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=175.12 Aligned_cols=140 Identities=24% Similarity=0.469 Sum_probs=127.7
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC-CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQ 415 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~-~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~ 415 (489)
..++.+++.+++.+|..+|.|++|+|+.+||..+|+.+|. .++..++..++... +|.|+|+||+.++... ....
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~ 92 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGAD 92 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCC
Confidence 3678899999999999999999999999999999999999 99999999999864 7999999999988654 2334
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+.+..+|+.||.|++|+|+.+||+.+|..+| +++++++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 567899999999999999999999999999988 789999999999999999999999999999864
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=178.47 Aligned_cols=141 Identities=19% Similarity=0.315 Sum_probs=126.8
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHH----HHHHhCCCCCHHHHH-----------HHHHccCCCCCcceehHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKK----GLQRVGANLMDSEID-----------GLMQAGDIDNSGTMDYGEFI 405 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~----~l~~lg~~~~~~~i~-----------~l~~~~D~d~~g~I~f~eF~ 405 (489)
+++++.+++.+|..+|.|++|.|+.+||.. +++.+|..++..++. .+|..+|.|++|.|+|+||+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~ 81 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI 81 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 567889999999999999999999999999 688889998888776 88999999999999999999
Q ss_pred HHHHHhhhhhh--------HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 040003 406 AAMLHLNKIQR--------EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAM 477 (489)
Q Consensus 406 ~~~~~~~~~~~--------~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~ 477 (489)
.++........ ...+..+|+.+|.|++|+|+.+||+.++..+|++++++..+|+.+|.|+||.|+|+||+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~ 161 (176)
T 1nya_A 82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTA 161 (176)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHH
T ss_pred HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 98865432211 3568899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhC
Q 040003 478 MQDS 481 (489)
Q Consensus 478 ~~~~ 481 (489)
|...
T Consensus 162 ~~~~ 165 (176)
T 1nya_A 162 VRDF 165 (176)
T ss_dssp HSCC
T ss_pred HHHH
Confidence 9764
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-23 Score=180.17 Aligned_cols=141 Identities=21% Similarity=0.447 Sum_probs=120.0
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC--CCcceehHHHHHHHHHhhh---
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSGTMDYGEFIAAMLHLNK--- 413 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d--~~g~I~f~eF~~~~~~~~~--- 413 (489)
.++++++.+++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++..+|.| ++|.|+|+||+.++.....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~ 82 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG 82 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence 46778889999999999999999999999999999999999999999999999999 9999999999998865432
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
....+.+..+|+.||.|++|+|+.+||+.++..+| +++++++.+++.+| |+||.|+|+||+.+|..
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 12345678899999999999999999999999998 78999999999999 99999999999998853
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=181.21 Aligned_cols=143 Identities=24% Similarity=0.369 Sum_probs=121.0
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHH-----HHHHHhCCCCCHH-----HHHHHHHccCCCCCcceehHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELK-----KGLQRVGANLMDS-----EIDGLMQAGDIDNSGTMDYGEFIAA 407 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~-----~~l~~lg~~~~~~-----~i~~l~~~~D~d~~g~I~f~eF~~~ 407 (489)
..++++++.+++++|..+|.|++|+|+.+||. .+++.+|..++.. ++..+++.+|.|++|.|+|+||+.+
T Consensus 12 ~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~ 91 (195)
T 1qv0_A 12 DFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDG 91 (195)
T ss_dssp CTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHH
Confidence 34689999999999999999999999999999 6888899887766 6899999999999999999999998
Q ss_pred HHHhhhhh-------hHHHHH----hhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHH
Q 040003 408 MLHLNKIQ-------REDHMY----AAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474 (489)
Q Consensus 408 ~~~~~~~~-------~~~~l~----~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF 474 (489)
+....... ..+.++ .+|+.||+|++|+|+.+||+.++..+| +++++++++++.+|.|+||.|+|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF 171 (195)
T 1qv0_A 92 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEM 171 (195)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHH
T ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHH
Confidence 76432211 112233 899999999999999999999999988 68999999999999999999999999
Q ss_pred HHHHHh
Q 040003 475 VAMMQD 480 (489)
Q Consensus 475 ~~~~~~ 480 (489)
+.+|..
T Consensus 172 ~~~~~~ 177 (195)
T 1qv0_A 172 TRQHLG 177 (195)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.88 E-value=7.5e-22 Score=171.89 Aligned_cols=140 Identities=22% Similarity=0.504 Sum_probs=125.7
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQ 415 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~ 415 (489)
...++.+++..++.+|..+|.|++|.|+.+||..+|+.+|..++..++..++. +++|.|+|+||+.++... ....
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~ 84 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD 84 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCC
Confidence 35678899999999999999999999999999999999999999999999986 468999999999988653 3334
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+.+..+|+.||+|++|+|+.+||+.+|..+| +++++++.+++.+|.| ||.|+|+||+.+|...
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 567899999999999999999999999999998 7899999999999999 9999999999999864
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-22 Score=184.72 Aligned_cols=143 Identities=18% Similarity=0.318 Sum_probs=122.8
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC--CCCHHHHHHHH-------HccCCCCCcceehHHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA--NLMDSEIDGLM-------QAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~--~~~~~~i~~l~-------~~~D~d~~g~I~f~eF~~~~ 408 (489)
..++.+++.+++++|..+|.|++|.|+.+||..+|..+|. .++..++..++ +.+|.|++|.|+|+||+.++
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~ 107 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN 107 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 4677888999999999999999999999999999999987 89999999999 99999999999999999987
Q ss_pred H---------Hhh-hhhhH-HHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 040003 409 L---------HLN-KIQRE-DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAM 477 (489)
Q Consensus 409 ~---------~~~-~~~~~-~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~ 477 (489)
. ... ..... +.+..+|+.||+|++|+|+.+||+.++..+|+++++++.+|..+|.|+||.|+|+||+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~~~ 187 (208)
T 2hpk_A 108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHL 187 (208)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHHHH
T ss_pred HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 6 221 11223 337899999999999999999999999999999999999999999999999999999999
Q ss_pred HHh
Q 040003 478 MQD 480 (489)
Q Consensus 478 ~~~ 480 (489)
|..
T Consensus 188 ~~~ 190 (208)
T 2hpk_A 188 FRK 190 (208)
T ss_dssp HHH
T ss_pred HHH
Confidence 974
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-22 Score=179.44 Aligned_cols=144 Identities=22% Similarity=0.347 Sum_probs=125.7
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH-----HHHHHhCCCCCHH-----HHHHHHHccCCCCCcceehHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELK-----KGLQRVGANLMDS-----EIDGLMQAGDIDNSGTMDYGEFIA 406 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~-----~~l~~lg~~~~~~-----~i~~l~~~~D~d~~g~I~f~eF~~ 406 (489)
....+.+++.+++.+|..+|.|++|.|+.+||. .+++.+|..++.. ++..+++.+|.|++|.|+|+||+.
T Consensus 7 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~ 86 (191)
T 1uhk_A 7 SDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIE 86 (191)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHH
T ss_pred hccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHH
Confidence 345678899999999999999999999999999 7888899888777 689999999999999999999998
Q ss_pred HHHHhhhh-------hhHHHHH----hhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHH
Q 040003 407 AMLHLNKI-------QREDHMY----AAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSE 473 (489)
Q Consensus 407 ~~~~~~~~-------~~~~~l~----~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~e 473 (489)
.+...... ...+.++ .+|+.+|.|++|+|+.+||+.++..+| +++++++.+++.+|.|+||.|+|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~e 166 (191)
T 1uhk_A 87 GWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166 (191)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred HHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHH
Confidence 87653221 1112233 899999999999999999999999988 6899999999999999999999999
Q ss_pred HHHHHHh
Q 040003 474 FVAMMQD 480 (489)
Q Consensus 474 F~~~~~~ 480 (489)
|+.+|..
T Consensus 167 F~~~~~~ 173 (191)
T 1uhk_A 167 MTRQHLG 173 (191)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999974
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=180.07 Aligned_cols=148 Identities=27% Similarity=0.469 Sum_probs=127.8
Q ss_pred CCcchhhhhhcc--HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHH
Q 040003 330 PIGDRVIAESLS--EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407 (489)
Q Consensus 330 ~~~~~~~~~~~~--~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~ 407 (489)
+.....+...++ .+++..++++|..+|.|++|+|+.+||..+|..+|.. ..++..+|..+|.|++|.|+|+||+.+
T Consensus 21 ~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~ 98 (180)
T 3mse_B 21 NIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNITYTEFMAG 98 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHHHCTTCCSEECHHHHHHH
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 334445555666 8889999999999999999999999999999999864 688999999999999999999999988
Q ss_pred HHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCC--------CceeHHHHHHHHH
Q 040003 408 MLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDND--------GRIDYSEFVAMMQ 479 (489)
Q Consensus 408 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~d--------G~I~~~eF~~~~~ 479 (489)
+..... ..++.+..+|+.||+|++|+|+.+||+.++...++++++++++|+.+|.|+| |.|+|+||+.+|.
T Consensus 99 ~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~ 177 (180)
T 3mse_B 99 CYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYML 177 (180)
T ss_dssp HSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHH
T ss_pred HHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHH
Confidence 764432 2246788999999999999999999999999777999999999999999999 9999999999997
Q ss_pred h
Q 040003 480 D 480 (489)
Q Consensus 480 ~ 480 (489)
.
T Consensus 178 ~ 178 (180)
T 3mse_B 178 S 178 (180)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-22 Score=170.62 Aligned_cols=130 Identities=29% Similarity=0.556 Sum_probs=120.8
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh--hhhhhHHHHHhhcc
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL--NKIQREDHMYAAFS 425 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~--~~~~~~~~l~~~F~ 425 (489)
++.+|..+|.|++|.|+.+||..+|+.+|..++..++..++.. +++|.|+|+||+.++... ........+..+|+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~ 83 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR 83 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence 8999999999999999999999999999999999999999987 789999999999988654 34455678999999
Q ss_pred cccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 426 YFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+|.|++|+|+.+||+.+|..+| +++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 84 ~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 84 ALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 99999999999999999999998 78999999999999999999999999999985
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-22 Score=175.55 Aligned_cols=138 Identities=25% Similarity=0.332 Sum_probs=123.5
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC----CCCCHHH-H--------HHHHHccCCCCCcceehHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG----ANLMDSE-I--------DGLMQAGDIDNSGTMDYGEFIAA 407 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg----~~~~~~~-i--------~~l~~~~D~d~~g~I~f~eF~~~ 407 (489)
+++++.+++.+|..+|.|++|.|+.+||..+|..++ ..++..+ + ..+++.+| ++|.|+|+||+.+
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~ 78 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS 78 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence 357788999999999999999999999999999988 8888877 6 45788888 8999999999998
Q ss_pred HHHhhh-----hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 408 MLHLNK-----IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 408 ~~~~~~-----~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+..... ....+.++.+|+.+|+|++|+|+.+||+.++..+|+++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 876543 2234678899999999999999999999999999999999999999999999999999999999964
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.8e-23 Score=184.32 Aligned_cols=151 Identities=30% Similarity=0.584 Sum_probs=133.4
Q ss_pred Ccchhhhhhc-cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh-----------CCCCCHHHHHHHHHccCCCCCcc
Q 040003 331 IGDRVIAESL-SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----------GANLMDSEIDGLMQAGDIDNSGT 398 (489)
Q Consensus 331 ~~~~~~~~~~-~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l-----------g~~~~~~~i~~l~~~~D~d~~g~ 398 (489)
.....+...+ +.+++..++.+|..+|.|++|.|+.+||..++..+ +...+..++..+++.+|.|++|.
T Consensus 24 ~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~ 103 (191)
T 3khe_A 24 AAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGY 103 (191)
T ss_dssp HHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSS
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCc
Confidence 3344455555 77888999999999999999999999999999987 66677889999999999999999
Q ss_pred eehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 399 I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
|+|+||+.++........++.+..+|+.+|.|++|+|+.+||+.++....+++++++.+++.+|.|+||.|+|+||+.+|
T Consensus 104 i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 183 (191)
T 3khe_A 104 IEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183 (191)
T ss_dssp EEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred CCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999886555555677899999999999999999999999998555899999999999999999999999999999
Q ss_pred HhC
Q 040003 479 QDS 481 (489)
Q Consensus 479 ~~~ 481 (489)
...
T Consensus 184 ~~~ 186 (191)
T 3khe_A 184 QKI 186 (191)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-22 Score=180.52 Aligned_cols=142 Identities=23% Similarity=0.453 Sum_probs=127.6
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-----
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN----- 412 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~----- 412 (489)
..++.+++.+++++|..+|.|++|+|+.+||..+ ..+|..++ +..++..+|.|++|.|+|+||+.++....
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 21 TGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp HCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence 4688999999999999999999999999999998 88887665 88999999999999999999999886554
Q ss_pred ------------hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc-C--CCHHHHHHHHHH----hcCCCCCceeHHH
Q 040003 413 ------------KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF-G--LDDTQLEDIIRE----VDQDNDGRIDYSE 473 (489)
Q Consensus 413 ------------~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g--~~~~~~~~~~~~----~d~d~dG~I~~~e 473 (489)
.....+.++.+|+.||.|++|+|+.+||+.++..+ | +++++++.+++. +|.|+||.|+|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E 176 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence 23456789999999999999999999999999998 8 789999998888 9999999999999
Q ss_pred HHHHHHhCCC
Q 040003 474 FVAMMQDSGL 483 (489)
Q Consensus 474 F~~~~~~~~~ 483 (489)
|+.+|...++
T Consensus 177 F~~~~~~~~~ 186 (202)
T 2bec_A 177 FTKSLEKMDV 186 (202)
T ss_dssp HHHTTTTSCH
T ss_pred HHHHHHHhCc
Confidence 9999976543
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-21 Score=169.95 Aligned_cols=137 Identities=20% Similarity=0.302 Sum_probs=119.8
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHH----HHhCCCCCHHHHHHH-----------HHccCCCCCcceehHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGL----QRVGANLMDSEIDGL-----------MQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l----~~lg~~~~~~~i~~l-----------~~~~D~d~~g~I~f~eF~~~~ 408 (489)
++.+++.+|..+|.|++|.|+.+||..++ +.+|..++..++..+ |+.+|.|++|.|+|+||+.++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 45789999999999999999999999975 556888888777654 699999999999999999887
Q ss_pred HHhhhhh-------hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 409 LHLNKIQ-------REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 409 ~~~~~~~-------~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
....... ..+.+..+|+.+|.|++|+|+.+||+.++..+|++++++..+++.+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFAR 160 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 6543211 13458899999999999999999999999999999999999999999999999999999999964
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-22 Score=188.42 Aligned_cols=146 Identities=22% Similarity=0.337 Sum_probs=127.2
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH-HHHHhCCCCCHHHHHHHHHcc---------CCCCCcceehHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK-GLQRVGANLMDSEIDGLMQAG---------DIDNSGTMDYGEFIA 406 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~-~l~~lg~~~~~~~i~~l~~~~---------D~d~~g~I~f~eF~~ 406 (489)
...++.+++.+++.+|..+|.|++|.|+.+||.. +++.+|..++..++..++..+ |.|++|.|+|+||+.
T Consensus 42 ~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~ 121 (226)
T 2lvv_A 42 PRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLE 121 (226)
T ss_dssp CSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHH
T ss_pred chhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHH
Confidence 3467889999999999999999999999999998 556678777766777777666 999999999999999
Q ss_pred HHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 407 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
++........++.+..+|+.||+|++|+|+.+||+.+|..+ |++..+++.+|..+|.|+||.|+|+||+.+|....
T Consensus 122 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 200 (226)
T 2lvv_A 122 FRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAVTKK 200 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcC
Confidence 76555445556789999999999999999999999999887 87777799999999999999999999999997643
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-22 Score=179.87 Aligned_cols=141 Identities=18% Similarity=0.442 Sum_probs=128.5
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQ 415 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~ 415 (489)
...++.+++..|+.+|..+|.|++|+|+..||..+|+.+|..++..++..++..+ +|.|+|+||+.++... ....
T Consensus 48 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~ 123 (196)
T 3dtp_E 48 FAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTD 123 (196)
T ss_dssp SCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSC
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCC
Confidence 3467888999999999999999999999999999999999999999999999877 7999999999988653 3334
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
..+.+..+|+.||.|++|+|+.+||+.+| .+| +++++++.+|..+|.|+||.|+|+||+.+|....
T Consensus 124 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 191 (196)
T 3dtp_E 124 EEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGA 191 (196)
T ss_dssp CHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSCC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCC
Confidence 56789999999999999999999999999 998 7899999999999999999999999999998653
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-22 Score=176.66 Aligned_cols=141 Identities=16% Similarity=0.321 Sum_probs=126.8
Q ss_pred ccHHHHHHHHHHHhhh-cCCCCCCccHHHHHHHHHHhC----CCCCHHHHHHH-----------HHccCCCCCcceehHH
Q 040003 340 LSEEEIAGLKEMFKMI-DTDNSGYITLEELKKGLQRVG----ANLMDSEIDGL-----------MQAGDIDNSGTMDYGE 403 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~-D~d~~g~i~~~el~~~l~~lg----~~~~~~~i~~l-----------~~~~D~d~~g~I~f~e 403 (489)
++.++..+++.+|..+ |.|++|.|+.+||..++..++ ..++..++..+ |+.+|.|++|.|+|+|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E 81 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 4678889999999999 999999999999999999988 78888888755 9999999999999999
Q ss_pred HHHHHHHhhhh---------hhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHH
Q 040003 404 FIAAMLHLNKI---------QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEF 474 (489)
Q Consensus 404 F~~~~~~~~~~---------~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF 474 (489)
|+.++...... .....+..+|+.+|.|++|+|+.+||+.++..+|++++++..+|+.+|.|+||.|+|+||
T Consensus 82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~ef 161 (185)
T 2sas_A 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRY 161 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHHH
Confidence 99988654221 234678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040003 475 VAMMQD 480 (489)
Q Consensus 475 ~~~~~~ 480 (489)
+.+|..
T Consensus 162 ~~~~~~ 167 (185)
T 2sas_A 162 KELYYR 167 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=169.79 Aligned_cols=140 Identities=35% Similarity=0.592 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhhHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQREDHM 420 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~~~~l 420 (489)
++++.+++++|..+|.|++|+|+.+|| ..+..++... ++..+++.+|.|++|.|+|+||+.++.... .....+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 77 (155)
T 3ll8_B 2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77 (155)
T ss_dssp CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence 467889999999999999999999999 6677777554 788899999999999999999999887543 23456789
Q ss_pred HhhcccccccCCCcccHHHHHHHHHH-cC--CCHHHHHHHHHH----hcCCCCCceeHHHHHHHHHhCCCCc
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQ-FG--LDDTQLEDIIRE----VDQDNDGRIDYSEFVAMMQDSGLGK 485 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~~~----~d~d~dG~I~~~eF~~~~~~~~~~~ 485 (489)
..+|+.+|.|++|+|+.+||+.++.. +| +++.++..+++. +|.|+||.|+|+||+.+|...+...
T Consensus 78 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~ 149 (155)
T 3ll8_B 78 RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 149 (155)
T ss_dssp HHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGGG
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCchh
Confidence 99999999999999999999999988 46 789999999888 9999999999999999998876544
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.3e-22 Score=177.63 Aligned_cols=131 Identities=24% Similarity=0.417 Sum_probs=121.1
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhc
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F 424 (489)
..+++++|..+|.|++|.|+.+||..+|..++..+++.++..+++.+|.|++|.|+|+||+..+.. ...++.+|
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~------~~~~~~~F 99 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGF 99 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH------HHHHHHHH
Confidence 356889999999999999999999999987888899999999999999999999999999988753 25678999
Q ss_pred ccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 425 SYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 425 ~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+|.|++|+|+.+||+.++..+| +++++++.+++.+|.|+||.|+|+||+.+|...
T Consensus 100 ~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 158 (191)
T 1y1x_A 100 RKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV 158 (191)
T ss_dssp HHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 999999999999999999999988 789999999999999999999999999999754
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.8e-22 Score=174.21 Aligned_cols=132 Identities=25% Similarity=0.404 Sum_probs=121.0
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYA 422 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~ 422 (489)
...+++++|..+|.|++|+|+.+||..+|+.++ ..++..++..+++.+|.|++|.|+|+||+..+.. ...++.
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~------~~~~~~ 78 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY------ITDWQN 78 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH------HHHHHH
T ss_pred chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHHH
Confidence 456789999999999999999999999999988 7789999999999999999999999999987753 356789
Q ss_pred hcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+|+.+|.|++|+|+.+||+.++..+| ++++++..+++.+|.|+||.|+|+||+.++...
T Consensus 79 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 139 (172)
T 2znd_A 79 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL 139 (172)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999999988 789999999999999999999999999988653
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=178.49 Aligned_cols=141 Identities=29% Similarity=0.513 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMY 421 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~ 421 (489)
..++..++++|..+|.|++|+|+.+||..+|..+|..++..++..+|+.+|.|++|.|+|+||+.++.........+.+.
T Consensus 33 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~ 112 (204)
T 3e3r_A 33 ASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIA 112 (204)
T ss_dssp -------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999886544445667899
Q ss_pred hhcccccccCCCcccHHHHHHHHHH-------cC--CCHHHHHHHHHHhcC-CCCCceeHHHHHHHHHhCC
Q 040003 422 AAFSYFDKDGSGYITPDELQTACQQ-------FG--LDDTQLEDIIREVDQ-DNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 422 ~~F~~~D~d~~G~I~~~El~~~l~~-------~g--~~~~~~~~~~~~~d~-d~dG~I~~~eF~~~~~~~~ 482 (489)
.+|+.+|.|++|+|+.+||+.++.. .| +++++++.+|+.+|. |+||.|+|+||+.+|...+
T Consensus 113 ~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 113 AAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 9999999999999999999999974 34 457789999999998 9999999999999998654
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-21 Score=176.94 Aligned_cols=145 Identities=23% Similarity=0.345 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHH
Q 040003 342 EEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHM 420 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l 420 (489)
.-...+++.+|..+|.+ ++|+|+.+||..+|+.++...+..++..+|+.+|.|++|.|+|+||+.++........++.+
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 44566788899999999 89999999999999999998889999999999999999999999999998766555567789
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHc----C---------------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQF----G---------------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~----g---------------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+|+.+|.|++|+|+.+||+.++..+ | .+++++..+|+.+|.|+||.|+|+||+.+|...
T Consensus 98 ~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~ 177 (204)
T 1jba_A 98 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD 177 (204)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcC
Confidence 999999999999999999999999876 3 456789999999999999999999999999866
Q ss_pred CCCcc
Q 040003 482 GLGKK 486 (489)
Q Consensus 482 ~~~~~ 486 (489)
+-+.+
T Consensus 178 ~~~~~ 182 (204)
T 1jba_A 178 KWVMK 182 (204)
T ss_dssp TTHHH
T ss_pred hHHHH
Confidence 54433
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.4e-21 Score=190.52 Aligned_cols=143 Identities=38% Similarity=0.711 Sum_probs=129.4
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~ 416 (489)
..++.+++.+++++|+.+|.|++|.|+.+||..+|..++..++..++..+++.+|.|++|.|+|+||+.++.... ....
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 467888999999999999999999999999999999999999999999999999999999999999999886542 3344
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.+..+|+.||.|++|+|+.+||+.+|..+| +++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 67889999999999999999999999999988 78999999999999999999999999999863
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=167.19 Aligned_cols=130 Identities=24% Similarity=0.447 Sum_probs=117.4
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh---hhhHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK---IQREDHMYA 422 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~---~~~~~~l~~ 422 (489)
.+++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++. +++|.|+|+||+.++..... ....+.+..
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 80 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHHH
Confidence 45789999999999999999999999999999999999999987 88999999999998865432 123478999
Q ss_pred hcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+|+.+|.|++|+|+.+||+.+|..+| +++++++.+++.+|. +||.|+|+||+.+|..
T Consensus 81 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 99999999999999999999999887 789999999999999 9999999999999874
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=173.43 Aligned_cols=130 Identities=23% Similarity=0.373 Sum_probs=119.7
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh-C-------CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-G-------ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQ 415 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l-g-------~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~ 415 (489)
++.+++.+|..+| |++|.|+.+||..+|+.+ | ..++..++..+++.+|.|++|.|+|+||+..+..
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~----- 75 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN----- 75 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH-----
Confidence 5678999999999 999999999999999998 6 6788999999999999999999999999988763
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
...++.+|+.+|.|++|+|+.+||+.++..+| +++++++.+++.+| |+||.|+|+||+.+|...
T Consensus 76 -~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~ 141 (173)
T 1alv_A 76 -IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL 141 (173)
T ss_dssp -HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence 35688999999999999999999999999988 68999999999999 999999999999998754
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.85 E-value=7e-21 Score=170.35 Aligned_cols=147 Identities=20% Similarity=0.342 Sum_probs=126.8
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..++.+++..+.+.|+.+ |++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|+||+.++........
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 90 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 90 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence 356778888777777665 688999999999999999865 78899999999999999999999999999876655566
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc----C------CCH----HHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF----G------LDD----TQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g------~~~----~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
++.+..+|+.+|.|++|+|+.+||+.++..+ | +++ +++.++|+.+|.|+||.|+|+||+.+|...+
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~ 170 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDD 170 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcCh
Confidence 7889999999999999999999999999876 5 333 8899999999999999999999999998766
Q ss_pred CCcc
Q 040003 483 LGKK 486 (489)
Q Consensus 483 ~~~~ 486 (489)
...+
T Consensus 171 ~~~~ 174 (183)
T 1s6c_A 171 NIMR 174 (183)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=180.80 Aligned_cols=145 Identities=19% Similarity=0.346 Sum_probs=124.2
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH-hCCCCCHHHHHHHHHcc---------CCCCCcceehHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR-VGANLMDSEIDGLMQAG---------DIDNSGTMDYGEFIA 406 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~-lg~~~~~~~i~~l~~~~---------D~d~~g~I~f~eF~~ 406 (489)
...++.+++.+++.+|..+|.|++|+|+.+||..+|.. +|..++..++..++..+ |.|++|.|+|+||+.
T Consensus 39 ~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~ 118 (219)
T 3cs1_A 39 PREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLE 118 (219)
T ss_dssp CCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHH
Confidence 34678899999999999999999999999999999988 78777666665554432 348899999999998
Q ss_pred HHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 407 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+.........+.+..+|+.||.|++|+|+.+||+.+|..+| +++++++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 119 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 119 FRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAV 196 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 875544445567899999999999999999999999998775 788889999999999999999999999999753
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-21 Score=175.88 Aligned_cols=143 Identities=26% Similarity=0.473 Sum_probs=124.2
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh---
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI--- 414 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~--- 414 (489)
..++.+++.+++.+|..+|.|++|+|+.+||..++ .+|..+.. ..+++.+|.+++|.|+|+||+.++......
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 46788999999999999999999999999999864 67776654 457888999999999999999988754311
Q ss_pred -------------hhHHHHHhhcccccccCCCcccHHHHHHHHHHc-C--CCHHHHHHH----HHHhcCCCCCceeHHHH
Q 040003 415 -------------QREDHMYAAFSYFDKDGSGYITPDELQTACQQF-G--LDDTQLEDI----IREVDQDNDGRIDYSEF 474 (489)
Q Consensus 415 -------------~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g--~~~~~~~~~----~~~~d~d~dG~I~~~eF 474 (489)
...+.++.+|+.||.|++|+|+.+||+.++..+ | +++++++.+ ++.+|.|+||.|+|+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF 176 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 256789999999999999999999999999986 7 788888887 99999999999999999
Q ss_pred HHHHHhCCCC
Q 040003 475 VAMMQDSGLG 484 (489)
Q Consensus 475 ~~~~~~~~~~ 484 (489)
+.+|...++.
T Consensus 177 ~~~~~~~~~~ 186 (208)
T 2ct9_A 177 VKVLEKVDVE 186 (208)
T ss_dssp HHTTTTSCGG
T ss_pred HHHHhccChH
Confidence 9999876544
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=173.08 Aligned_cols=148 Identities=28% Similarity=0.420 Sum_probs=126.6
Q ss_pred hccHHHHHHHHHHHhhhcCC--CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQ 415 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d--~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~ 415 (489)
.++.+++.+++++|..+|.| ++|.|+.+||..+|.. .....+..+..+|+.+|.|++|.|+|+||+.++.... ...
T Consensus 41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 119 (226)
T 2zfd_A 41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP 119 (226)
T ss_dssp SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCC
Confidence 68899999999999999999 9999999999999977 4344456678899999999999999999999887654 334
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHH----HcC--CCHHHHHHHH----HHhcCCCCCceeHHHHHHHHHhCCCCc
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQ----QFG--LDDTQLEDII----REVDQDNDGRIDYSEFVAMMQDSGLGK 485 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~----~~g--~~~~~~~~~~----~~~d~d~dG~I~~~eF~~~~~~~~~~~ 485 (489)
.++.+..+|+.||.|++|+|+.+||+.++. .+| ++++++++++ +.+|.|+||.|+|+||+.+|...+...
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~~~ 199 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLL 199 (226)
T ss_dssp HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGGGG
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHH
Confidence 577899999999999999999999999995 455 6777776554 599999999999999999999876555
Q ss_pred cc
Q 040003 486 KV 487 (489)
Q Consensus 486 ~~ 487 (489)
+.
T Consensus 200 ~~ 201 (226)
T 2zfd_A 200 KN 201 (226)
T ss_dssp GG
T ss_pred HH
Confidence 43
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.8e-21 Score=162.83 Aligned_cols=133 Identities=15% Similarity=0.318 Sum_probs=120.8
Q ss_pred cHHHHHHHHHHHhhhcCCC-CCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhhHH
Q 040003 341 SEEEIAGLKEMFKMIDTDN-SGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQRED 418 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~-~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~~~ 418 (489)
..+++.+++.+|..+|.|+ +|+|+.+||..+|+.+|..++..++..++..+|.+ |+|+||+.++... ......+
T Consensus 9 ~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~ 84 (146)
T 2qac_A 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVE 84 (146)
T ss_dssp HHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHH
T ss_pred HHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHH
Confidence 3456778999999999999 99999999999999999999999999999999876 9999999988753 2334567
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.+..+|+.||+|++|+|+.+||+.++..+| +++++++.+++.+ |+||.|+|+||+.+|.
T Consensus 85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 899999999999999999999999999998 7899999999999 9999999999999885
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-21 Score=160.62 Aligned_cols=129 Identities=22% Similarity=0.377 Sum_probs=115.6
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH---HhhhhhhHHHHHhhc
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML---HLNKIQREDHMYAAF 424 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~---~~~~~~~~~~l~~~F 424 (489)
++++|..+|.|++|+|+.+||..++..++..++..++..+++.+|.|++|.|+|+||+.++. ..........+..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999998874 222223445689999
Q ss_pred ccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 425 SYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 425 ~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+.+|.|++|+|+.+||+.++..+|... +.++++.+|.|+||.|+|+||+.+|
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~~~~~--~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKHGIEK--VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTTCHH--HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHCCCCCCccCHHHHHHHHHHhCHHH--HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 999999999999999999999887543 9999999999999999999999886
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-20 Score=169.40 Aligned_cols=148 Identities=24% Similarity=0.427 Sum_probs=125.7
Q ss_pred hccHHHHHHHHHHHhhhcCC--CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQ 415 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d--~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~ 415 (489)
.++.+++.+++.+|..+|.| ++|.|+.+||..+|.. .....+..+..+|+.+|.|++|.|+|+||+.++.... ...
T Consensus 30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 108 (207)
T 2ehb_A 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP 108 (207)
T ss_dssp SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSC
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCC
Confidence 67889999999999999999 9999999999999976 3344456778899999999999999999999887554 234
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHH----HcC--CCHHHHHHHH----HHhcCCCCCceeHHHHHHHHHhCCCCc
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQ----QFG--LDDTQLEDII----REVDQDNDGRIDYSEFVAMMQDSGLGK 485 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~----~~g--~~~~~~~~~~----~~~d~d~dG~I~~~eF~~~~~~~~~~~ 485 (489)
.++.+..+|+.+|.|++|+|+.+||+.++. ..| ++++++++++ +.+|.|+||.|+|+||+.+|...+...
T Consensus 109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 188 (207)
T 2ehb_A 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLI 188 (207)
T ss_dssp HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCGGGG
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHH
Confidence 567899999999999999999999999985 345 7777765554 699999999999999999999876554
Q ss_pred cc
Q 040003 486 KV 487 (489)
Q Consensus 486 ~~ 487 (489)
+.
T Consensus 189 ~~ 190 (207)
T 2ehb_A 189 KN 190 (207)
T ss_dssp GG
T ss_pred HH
Confidence 43
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.4e-21 Score=169.07 Aligned_cols=119 Identities=18% Similarity=0.257 Sum_probs=107.3
Q ss_pred cCCCCCCccHHHHHHHHHHh------CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccc
Q 040003 356 DTDNSGYITLEELKKGLQRV------GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDK 429 (489)
Q Consensus 356 D~d~~g~i~~~el~~~l~~l------g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~ 429 (489)
+.|++|+|+.+||+.+|+.+ |..++..++..+++.+|.|++|.|+|+||+.++... .+++.+|+.||
T Consensus 14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD- 86 (174)
T 2i7a_A 14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ- 86 (174)
T ss_dssp SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-
T ss_pred cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-
Confidence 67899999999999999998 667889999999999999999999999999887543 46889999999
Q ss_pred cCCCcccHHHHHHHHHHc----C--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 430 DGSGYITPDELQTACQQF----G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 430 d~~G~I~~~El~~~l~~~----g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
|++|+|+.+||+.+|+.+ | +++++++.|++.+| |+||.|+|+||+.+|....
T Consensus 87 d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~ 144 (174)
T 2i7a_A 87 TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRLE 144 (174)
T ss_dssp SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHHH
Confidence 999999999999999998 7 68999999999999 9999999999999987543
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-20 Score=172.70 Aligned_cols=146 Identities=20% Similarity=0.333 Sum_probs=126.1
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
.++.+++..+.+.|+.. |++|+|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|+||+.++........+
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~ 124 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH 124 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHH
Confidence 47777777777666654 488999999999999999764 788999999999999999999999999998766555667
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHc----C------CC----HHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQF----G------LD----DTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g------~~----~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+..+|+.||.|++|+|+.+||+.++..+ | ++ .++++++|+.+|.|+||.|+|+||+.+|...+.
T Consensus 125 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~ 204 (224)
T 1s1e_A 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDN 204 (224)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHH
Confidence 889999999999999999999999999875 5 33 478999999999999999999999999987655
Q ss_pred Ccc
Q 040003 484 GKK 486 (489)
Q Consensus 484 ~~~ 486 (489)
..+
T Consensus 205 l~~ 207 (224)
T 1s1e_A 205 IMR 207 (224)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=174.29 Aligned_cols=149 Identities=21% Similarity=0.308 Sum_probs=128.0
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..++.+++..+++.|.. .|++|.|+.+||..++..++ ...+...+..+|+.+|.|++|.|+|+||+.++........
T Consensus 59 ~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 136 (229)
T 3dd4_A 59 SKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV 136 (229)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCCh
Confidence 35778888888888876 57789999999999999864 4566778899999999999999999999999877665666
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc------------C--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF------------G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~------------g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
++.++.+|+.||+|++|+|+.+||..++..+ + +++++++.+|+.+|.|+||.|+|+||+.++...+
T Consensus 137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~ 216 (229)
T 3dd4_A 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDE 216 (229)
T ss_dssp HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCH
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCH
Confidence 7889999999999999999999999999875 2 4567899999999999999999999999999776
Q ss_pred CCcccc
Q 040003 483 LGKKVF 488 (489)
Q Consensus 483 ~~~~~f 488 (489)
...+.|
T Consensus 217 ~~~~~~ 222 (229)
T 3dd4_A 217 NIMRSM 222 (229)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-21 Score=173.82 Aligned_cols=131 Identities=25% Similarity=0.373 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC-----CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA-----NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~-----~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..+++++++ |..+|.|++|+|+.+||..+|+.+|. .++..++..+++.+|.|++|.|+|+||+.++...
T Consensus 29 ~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~----- 102 (198)
T 1juo_A 29 GQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL----- 102 (198)
T ss_dssp TCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-----
T ss_pred ccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH-----
Confidence 335566888 99999999999999999999999986 5789999999999999999999999999887642
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.++.+|+.+|.|++|+|+.+||+.++..+| +++++++++++.+ |+||.|+|+||+.++...
T Consensus 103 -~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~ 166 (198)
T 1juo_A 103 -NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL 166 (198)
T ss_dssp -HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred -HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 5688999999999999999999999999988 7899999999999 999999999999988654
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-20 Score=168.11 Aligned_cols=147 Identities=20% Similarity=0.304 Sum_probs=125.5
Q ss_pred hhccHHHHHHHHHHHhhhcC-----CC-C--CCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcc-eehHHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDT-----DN-S--GYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT-MDYGEFIAAM 408 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~-----d~-~--g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~-I~f~eF~~~~ 408 (489)
..++.+++..++++|..+|. |+ + |.|+.+||.. |..+|..++.. .++..+|.|++|. |+|+||+.++
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHH
Confidence 36889999999999999999 68 8 9999999999 99999888765 4667789999999 9999999988
Q ss_pred HHhhhh-hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC-------CCHHHHHH----HHHHhcCCCCCceeHHHHHH
Q 040003 409 LHLNKI-QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-------LDDTQLED----IIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 409 ~~~~~~-~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-------~~~~~~~~----~~~~~d~d~dG~I~~~eF~~ 476 (489)
...... ..++.++.+|+.||.|++|+|+.+||+.++..++ ++++++.. +++.+|.|+||.|+|+||+.
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 167 (183)
T 1dgu_A 88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 167 (183)
T ss_dssp HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 765433 3356899999999999999999999999998875 35677775 99999999999999999999
Q ss_pred HHHhCCCCcccc
Q 040003 477 MMQDSGLGKKVF 488 (489)
Q Consensus 477 ~~~~~~~~~~~f 488 (489)
+|...+-..+.|
T Consensus 168 ~~~~~~~~~~~~ 179 (183)
T 1dgu_A 168 VISRSPDFASSF 179 (183)
T ss_dssp HHCSSCHHHHCC
T ss_pred HHHhChHHHHhc
Confidence 998765554443
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-20 Score=163.90 Aligned_cols=124 Identities=26% Similarity=0.380 Sum_probs=113.8
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHhCC-----CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhc
Q 040003 350 EMFKMIDTDNSGYITLEELKKGLQRVGA-----NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l~~lg~-----~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F 424 (489)
+.|..+|.|++|.|+.+||..+++.+|. .++..++..+++.+|.|++|.|+|+||+.++... +.+..+|
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 78 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF 78 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 3588999999999999999999999987 6789999999999999999999999999887543 5688999
Q ss_pred ccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 425 SYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 425 ~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+|.|++|+|+.+||+.++..+| +++++++.+++.+ |+||.|+|+||+.++...
T Consensus 79 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 135 (167)
T 1gjy_A 79 ISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL 135 (167)
T ss_dssp HHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence 999999999999999999999988 7899999999999 899999999999988654
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-20 Score=167.04 Aligned_cols=140 Identities=21% Similarity=0.307 Sum_probs=122.0
Q ss_pred HHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhc
Q 040003 347 GLKEMFKMIDTD-NSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424 (489)
Q Consensus 347 ~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F 424 (489)
+++.+|..+|.| ++|+|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|+||+.++........++.+..+|
T Consensus 26 el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f 105 (190)
T 2l2e_A 26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAF 105 (190)
T ss_dssp HHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 355569999999 89999999999999998654 5667899999999999999999999999887655555678899999
Q ss_pred ccccccCCCcccHHHHHHHHHHc--------------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcc
Q 040003 425 SYFDKDGSGYITPDELQTACQQF--------------GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKK 486 (489)
Q Consensus 425 ~~~D~d~~G~I~~~El~~~l~~~--------------g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~ 486 (489)
+.+|.|++|+|+.+||..++..+ ..+++++.++|+.+|.|+||.|+|+||+.++...+....
T Consensus 106 ~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 181 (190)
T 2l2e_A 106 QLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVS 181 (190)
T ss_dssp HHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCTHHHH
T ss_pred hHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCcHHHH
Confidence 99999999999999999999772 256889999999999999999999999999988765443
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-20 Score=164.33 Aligned_cols=124 Identities=24% Similarity=0.366 Sum_probs=114.1
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHhCC-----CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhc
Q 040003 350 EMFKMIDTDNSGYITLEELKKGLQRVGA-----NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l~~lg~-----~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F 424 (489)
..|..+|.|++|.|+.+||..+|+.+|. .++..++..+++.+|.|++|.|+|+||+.++... +.+..+|
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 76 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF 76 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 3589999999999999999999999987 6789999999999999999999999999877542 5678999
Q ss_pred ccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 425 SYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 425 ~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+|.|++|+|+.+||+.++..+| +++++++.+++.+ |++|.|+|+||+.+|...
T Consensus 77 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 133 (165)
T 1k94_A 77 MTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL 133 (165)
T ss_dssp HHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred HHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 999999999999999999999988 6899999999999 999999999999998754
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-20 Score=170.71 Aligned_cols=139 Identities=19% Similarity=0.270 Sum_probs=120.2
Q ss_pred HHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhc
Q 040003 347 GLKEMFKMIDTD-NSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424 (489)
Q Consensus 347 ~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F 424 (489)
+++.+|..+|.+ ++|+|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|+||+.++........++.+..+|
T Consensus 34 ~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f 113 (207)
T 2d8n_A 34 ELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAF 113 (207)
T ss_dssp HHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 455667777877 79999999999999999865 7888999999999999999999999999887655445567788999
Q ss_pred ccccccCCCcccHHHHHHHHHHc----C------CC------HHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCc
Q 040003 425 SYFDKDGSGYITPDELQTACQQF----G------LD------DTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGK 485 (489)
Q Consensus 425 ~~~D~d~~G~I~~~El~~~l~~~----g------~~------~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~ 485 (489)
+.+|.|++|+|+.+||+.++..+ | ++ ++++..+|+.+|.|+||.|+|+||+.+|...+.+.
T Consensus 114 ~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 190 (207)
T 2d8n_A 114 SLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEIL 190 (207)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHCHHHH
T ss_pred HHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhChHHH
Confidence 99999999999999999999875 5 33 46799999999999999999999999998765433
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=165.98 Aligned_cols=140 Identities=19% Similarity=0.300 Sum_probs=119.5
Q ss_pred HHHHHHhhhcCC-CCCCccHHHHHHHHHHhC-CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhc
Q 040003 347 GLKEMFKMIDTD-NSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424 (489)
Q Consensus 347 ~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg-~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F 424 (489)
+++.+|..||.+ ++|+|+.+||..++..++ ...+..++..+|+.+|.|++|.|+|+||+.++........++.+..+|
T Consensus 26 ~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f 105 (190)
T 1g8i_A 26 EVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAF 105 (190)
T ss_dssp HHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 455566677776 899999999999999983 235677899999999999999999999999887665555678899999
Q ss_pred ccccccCCCcccHHHHHHHHHHc----C----------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcc
Q 040003 425 SYFDKDGSGYITPDELQTACQQF----G----------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKK 486 (489)
Q Consensus 425 ~~~D~d~~G~I~~~El~~~l~~~----g----------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~ 486 (489)
+.+|.|++|+|+.+||+.++..+ | ++++++.++|+.+|.|+||.|+|+||+.+|...+...+
T Consensus 106 ~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~~~~~ 181 (190)
T 1g8i_A 106 KLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQ 181 (190)
T ss_dssp HHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHH
T ss_pred HhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhChHHHH
Confidence 99999999999999999999872 3 45788999999999999999999999999987765443
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-20 Score=173.38 Aligned_cols=146 Identities=21% Similarity=0.309 Sum_probs=123.9
Q ss_pred hccHHHHHHHHHHHhhhcC-----CC-C--CCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcc-eehHHHHHHHH
Q 040003 339 SLSEEEIAGLKEMFKMIDT-----DN-S--GYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT-MDYGEFIAAML 409 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~-----d~-~--g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~-I~f~eF~~~~~ 409 (489)
.++.+++.+++++|..+|. |+ + |+|+.+||.. |..++.++... .+++.+|.|++|. |+|+||+.++.
T Consensus 44 ~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~---~lf~~~D~d~dG~~I~f~EF~~~~~ 119 (214)
T 2l4h_A 44 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLLS 119 (214)
T ss_dssp SCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHH---HHHHHHCCSSSCCSEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHH---HHHHHhCcCCCCCEecHHHHHHHHH
Confidence 5788899999999999998 66 6 9999999999 99998887654 5677789999999 99999999987
Q ss_pred Hhhhh-hhHHHHHhhcccccccCCCcccHHHHHHHHHHc-------CCCHHHHH----HHHHHhcCCCCCceeHHHHHHH
Q 040003 410 HLNKI-QREDHMYAAFSYFDKDGSGYITPDELQTACQQF-------GLDDTQLE----DIIREVDQDNDGRIDYSEFVAM 477 (489)
Q Consensus 410 ~~~~~-~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g~~~~~~~----~~~~~~d~d~dG~I~~~eF~~~ 477 (489)
..... ..+++++.+|+.||.|++|+|+.+||+.++..+ .+++++++ .+|+.+|.|+||.|+|+||+.+
T Consensus 120 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~ 199 (214)
T 2l4h_A 120 VFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHV 199 (214)
T ss_dssp HTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHH
Confidence 65433 346789999999999999999999999999876 35666666 4999999999999999999999
Q ss_pred HHhCCCCcccc
Q 040003 478 MQDSGLGKKVF 488 (489)
Q Consensus 478 ~~~~~~~~~~f 488 (489)
|...+-..+.|
T Consensus 200 ~~~~p~~~~~l 210 (214)
T 2l4h_A 200 ISRSPDFASSF 210 (214)
T ss_dssp HHTCHHHHHHT
T ss_pred HHhChHHHHhc
Confidence 98775544433
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-20 Score=165.70 Aligned_cols=135 Identities=17% Similarity=0.216 Sum_probs=115.3
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccC---CCCCcceehHHHHHHHHHhhhhhhHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD---IDNSGTMDYGEFIAAMLHLNKIQREDH 419 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D---~d~~g~I~f~eF~~~~~~~~~~~~~~~ 419 (489)
+++.++++.|..+| ++|+|+.+||..+| |...++.++..++..+| .+++|.|+|+||+..+..+.....+++
T Consensus 25 ~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~ 99 (179)
T 3a8r_A 25 DGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNR 99 (179)
T ss_dssp CCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHH
T ss_pred hhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHH
Confidence 45678899999999 79999999999864 77788888888888877 467889999999988765544456778
Q ss_pred HHhhcccccccCCCcccHHHHHHHHH-HcCC---------CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQ-QFGL---------DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~-~~g~---------~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
++.+|+.||+|++|+|+.+||+.+|. .+|. ++++++.+|+.+|.|+||.|+|+||+.+|...+
T Consensus 100 l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~p 172 (179)
T 3a8r_A 100 LRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSP 172 (179)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC---
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc
Confidence 99999999999999999999999998 7763 567899999999999999999999999997653
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-20 Score=172.87 Aligned_cols=143 Identities=25% Similarity=0.345 Sum_probs=119.5
Q ss_pred HHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCCCCH-HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHh
Q 040003 345 IAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMD-SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYA 422 (489)
Q Consensus 345 ~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~~~~-~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~ 422 (489)
..+++.+|+.+|.+ ++|+|+.+||..+|..++..... .++..+|+.+|.|++|.|+|+||+.++........++.+..
T Consensus 18 ~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~ 97 (211)
T 2ggz_A 18 TQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKW 97 (211)
T ss_dssp ------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHH
Confidence 34567889999998 89999999999999988876543 56899999999999999999999999876655556778999
Q ss_pred hcccccccCCCcccHHHHHHHHHHcC-------CCH-HHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCccc
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFG-------LDD-TQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g-------~~~-~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~ 487 (489)
+|+.||.|++|+|+.+||+.++..++ ++. +.+..+|+.+|.|+||.|+|+||+.+|....-+.++
T Consensus 98 ~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~ 170 (211)
T 2ggz_A 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEI 170 (211)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHHH
T ss_pred HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHHH
Confidence 99999999999999999999998764 344 458999999999999999999999999876555443
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-20 Score=169.34 Aligned_cols=139 Identities=21% Similarity=0.335 Sum_probs=120.7
Q ss_pred HHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCCCCH-HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHH
Q 040003 344 EIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMD-SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMY 421 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~~~~-~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~ 421 (489)
...+++.+|..+|.+ ++|+|+.+||..+|+.++..... .++..+|..+|.|++|.|+|+||+.++........++.+.
T Consensus 12 ~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~ 91 (198)
T 2r2i_A 12 SATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLR 91 (198)
T ss_dssp HTSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHH
Confidence 344567888999988 89999999999999998877654 4599999999999999999999999987665555677899
Q ss_pred hhcccccccCCCcccHHHHHHHHHHcC--------CCH-HHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 422 AAFSYFDKDGSGYITPDELQTACQQFG--------LDD-TQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 422 ~~F~~~D~d~~G~I~~~El~~~l~~~g--------~~~-~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.+|+.||.|++|+|+.+||+.++..++ ++. +.+..+|+.+|.|+||.|+|+||+.+|...+
T Consensus 92 ~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 161 (198)
T 2r2i_A 92 WYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDE 161 (198)
T ss_dssp HHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTTCH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCH
Confidence 999999999999999999999998764 344 4589999999999999999999999997543
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-20 Score=167.43 Aligned_cols=142 Identities=18% Similarity=0.310 Sum_probs=121.7
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh------CCCCCHHHHHHHH---------HccCCCCCcceeh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV------GANLMDSEIDGLM---------QAGDIDNSGTMDY 401 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l------g~~~~~~~i~~l~---------~~~D~d~~g~I~f 401 (489)
...++.+++.+++.+|..+|.|++|+|+.+||..+|+.+ |..++..++..++ +.+|.|++|.|+|
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~ 84 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence 346788899999999999999999999999999999877 7778888888884 9999999999999
Q ss_pred HHHHHHHHHhh-hhhhHHHHHhhc--ccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHH
Q 040003 402 GEFIAAMLHLN-KIQREDHMYAAF--SYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 402 ~eF~~~~~~~~-~~~~~~~l~~~F--~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~ 476 (489)
+| .++.... .....+++..+| +.||.|++|+|+.+||+.++..+| ++++++..+|+.+|.|+||+|+|+||+.
T Consensus 85 ~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~ 162 (186)
T 2hps_A 85 AT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162 (186)
T ss_dssp HH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence 99 4443322 122234455666 778999999999999999999988 7899999999999999999999999999
Q ss_pred HHHh
Q 040003 477 MMQD 480 (489)
Q Consensus 477 ~~~~ 480 (489)
+|..
T Consensus 163 ~~~~ 166 (186)
T 2hps_A 163 TVND 166 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=160.59 Aligned_cols=146 Identities=23% Similarity=0.308 Sum_probs=122.2
Q ss_pred hccHHHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCC-CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~-~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
.++.+++..+.+ .||.+ ++|+|+.+||..++..++. ..+..++..+|..+|.|++|.|+|+||+.++........
T Consensus 21 ~~~~~~i~~~~~---~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1fpw_A 21 YFDRREIQQWHK---GFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CSTHHHHHHHHH---HHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred CCCHHHHHHHHH---HHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCc
Confidence 456666655554 45554 8999999999999999864 345677999999999999999999999998876554456
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHH----cC----------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ----FG----------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~----~g----------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
++.+..+|+.+|.|++|+|+.+||..++.. +| ++++++..+|+.+|.|+||.|+|+||+.++...+
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 1fpw_A 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP 177 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 678899999999999999999999999987 34 4578899999999999999999999999999876
Q ss_pred CCccc
Q 040003 483 LGKKV 487 (489)
Q Consensus 483 ~~~~~ 487 (489)
...+.
T Consensus 178 ~~~~~ 182 (190)
T 1fpw_A 178 SIIGA 182 (190)
T ss_dssp THHHH
T ss_pred HHHHH
Confidence 65543
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=163.03 Aligned_cols=141 Identities=28% Similarity=0.445 Sum_probs=119.5
Q ss_pred ccHHHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCCC-CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 340 LSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANL-MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~~-~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
++.++ ++.+|..+|.+ ++|+|+.+||..++..++... ...++..+|..+|.|++|.|+|+||+.++........+
T Consensus 22 ~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~ 98 (193)
T 1bjf_A 22 FTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLE 98 (193)
T ss_dssp CCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHH
T ss_pred CCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHH
Confidence 44444 55667778887 899999999999999987654 56778999999999999999999999988766555567
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHc----C----CC------HHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQF----G----LD------DTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g----~~------~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+..+|+.+|.|++|+|+.+||..++..+ | ++ ..++.++|+.+|.|+||.|+|+||+.+|....-
T Consensus 99 ~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~ 178 (193)
T 1bjf_A 99 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPS 178 (193)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTH
T ss_pred HHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCHH
Confidence 889999999999999999999999999763 4 33 345999999999999999999999999976543
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=8.6e-19 Score=165.71 Aligned_cols=147 Identities=19% Similarity=0.285 Sum_probs=126.2
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
.++.+++..+...|+.. +++|.|+.+||..++..++ ...+..++..+|+.+|.|++|.|+|+||+.++........+
T Consensus 87 ~~s~~ei~~l~~~fd~~--~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~ 164 (256)
T 2jul_A 87 KFTKKELQSLYRGFKNE--CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH 164 (256)
T ss_dssp TSCHHHHHHHHHHHHHH--CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChH
Confidence 46777777776666532 4799999999999999986 45678899999999999999999999999998766555567
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHc----C----------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQF----G----------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g----------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+..+|+.+|.|++|+|+.+||..++..+ | +++++++++|+.+|.|+||.|+|+||+.+|...+.
T Consensus 165 ~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~ 244 (256)
T 2jul_A 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDEN 244 (256)
T ss_dssp HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCHH
Confidence 889999999999999999999999999875 4 25788999999999999999999999999998766
Q ss_pred Cccc
Q 040003 484 GKKV 487 (489)
Q Consensus 484 ~~~~ 487 (489)
..+.
T Consensus 245 l~~~ 248 (256)
T 2jul_A 245 IMNS 248 (256)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-19 Score=177.22 Aligned_cols=143 Identities=15% Similarity=0.219 Sum_probs=102.2
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC--------------CHHH-----HHHHHHHHHHHHHhcCCC
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT--------------TEED-----VEDVRREIRIMHHLAGHP 189 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~--------------~~~~-----~~~~~~E~~~l~~l~~hp 189 (489)
.|+++.+||+|+||.||+|.+. +|+.||||+++..... .... .....+|...|.+| .+.
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~ 173 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEE 173 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 4999999999999999999874 6899999997642110 0000 11234688888888 344
Q ss_pred Cee--EEEEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCC
Q 040003 190 NVI--QIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQE 267 (489)
Q Consensus 190 niv--~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~ 267 (489)
++. ..+++ . ..+|||||+.|+.|..+. ....+..++.||+.+|.+||++|||||||||.|||+..++.
T Consensus 174 gv~vp~p~~~--~--~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 174 GFPVPEPIAQ--S--RHTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp TCSCCCEEEE--E--TTEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred CCCCCeeeec--c--CceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence 432 23322 2 237999999998886532 22345678899999999999999999999999999965321
Q ss_pred C-------CCeEEEeeccccccC
Q 040003 268 E-------APLKTIDFGLSMFFR 283 (489)
Q Consensus 268 ~-------~~~kl~DFGla~~~~ 283 (489)
. ..+.||||+-+....
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETT
T ss_pred cccccccccceEEEEeCCcccCC
Confidence 1 137899999886543
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-19 Score=171.77 Aligned_cols=142 Identities=20% Similarity=0.389 Sum_probs=122.9
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCH------HHHHHHHHccCCCCCcceehHHHHHHHHHh-
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMD------SEIDGLMQAGDIDNSGTMDYGEFIAAMLHL- 411 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~------~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~- 411 (489)
.+++.+..+++.+|..+|.|++|.|+.+||..+|+.+|..++. .++..++..+|.|++|.|+|+||+..+...
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~ 88 (263)
T 2f33_A 9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEE 88 (263)
T ss_dssp TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCT
T ss_pred hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhh
Confidence 4555667789999999999999999999999999998765544 788999999999999999999999887432
Q ss_pred --------hhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc----C--CCHHHHHH----HHHHhcCCCCCceeHHH
Q 040003 412 --------NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF----G--LDDTQLED----IIREVDQDNDGRIDYSE 473 (489)
Q Consensus 412 --------~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g--~~~~~~~~----~~~~~d~d~dG~I~~~e 473 (489)
......+.++.+|+.||.|++|+|+.+||+.++..+ | +++.++.. +++.+|.|++|.|+|+|
T Consensus 89 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~e 168 (263)
T 2f33_A 89 NFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTE 168 (263)
T ss_dssp THHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHH
T ss_pred hHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 233456789999999999999999999999999876 5 67887776 99999999999999999
Q ss_pred HHHHHHh
Q 040003 474 FVAMMQD 480 (489)
Q Consensus 474 F~~~~~~ 480 (489)
|+.++..
T Consensus 169 f~~~~~~ 175 (263)
T 2f33_A 169 MARLLPV 175 (263)
T ss_dssp HHHHSCT
T ss_pred HHHHHHH
Confidence 9998753
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-19 Score=165.62 Aligned_cols=137 Identities=21% Similarity=0.411 Sum_probs=120.0
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh----CCCCCHHHHHH----HHHccCCCCCcceehHHHHHHHHH------
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV----GANLMDSEIDG----LMQAGDIDNSGTMDYGEFIAAMLH------ 410 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l----g~~~~~~~i~~----l~~~~D~d~~g~I~f~eF~~~~~~------ 410 (489)
...++.+|..+|.|++|+|+.+||..+|..+ |..++..++.. ++..+|.|++|.|+|+||+..+..
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~ 181 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL 181 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence 3458899999999999999999999999988 88899888876 999999999999999999887643
Q ss_pred -h-hhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC------CCHHHHHHHHHH-hcCCCCCceeHHHHHHHHHhC
Q 040003 411 -L-NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------LDDTQLEDIIRE-VDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 411 -~-~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------~~~~~~~~~~~~-~d~d~dG~I~~~eF~~~~~~~ 481 (489)
. ......+.+..+|+.||+|++|+|+.+||+.++..++ +++++++.+++. +|.|+||.|+|+||+.+|...
T Consensus 182 ~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 261 (263)
T 2f33_A 182 KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261 (263)
T ss_dssp HHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHCCS
T ss_pred HhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHhcc
Confidence 1 1224467889999999999999999999999998763 678899999987 799999999999999999753
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.77 E-value=5.8e-19 Score=189.70 Aligned_cols=142 Identities=23% Similarity=0.313 Sum_probs=128.2
Q ss_pred hccHHH-HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh--------CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 339 SLSEEE-IAGLKEMFKMIDTDNSGYITLEELKKGLQRV--------GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 339 ~~~~~~-~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l--------g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
.++.++ ..+++++|+.+| |++|.|+.+||+.+|..+ +..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~ 602 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 366777 889999999999 999999999999999997 7789999999999999999999999999999886
Q ss_pred HhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCccc
Q 040003 410 HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487 (489)
Q Consensus 410 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~ 487 (489)
.. +.++.+|+.||+|++|+|+.+||+.+|+.+| +++++++.++..+| |+||.|+|+||+.+|.....+.++
T Consensus 603 ~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~ 675 (714)
T 3bow_A 603 KI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKI 675 (714)
T ss_dssp HH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHH
Confidence 43 5688999999999999999999999999998 78999999999999 999999999999999765444444
Q ss_pred c
Q 040003 488 F 488 (489)
Q Consensus 488 f 488 (489)
|
T Consensus 676 F 676 (714)
T 3bow_A 676 F 676 (714)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-19 Score=173.54 Aligned_cols=130 Identities=23% Similarity=0.395 Sum_probs=119.7
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHH-HHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHH
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDG-LMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMY 421 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~-l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~ 421 (489)
.....++.+|..+|.|++|+|+.+||..+| +|..++..++.. ++..+|.|++|.|+|+||+.++.... .+.
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~ 256 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR 256 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence 456678889999999999999999999999 888888999999 99999999999999999999886543 678
Q ss_pred hhcccccccCCCcccHHHHHHHH-HHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 422 AAFSYFDKDGSGYITPDELQTAC-QQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 422 ~~F~~~D~d~~G~I~~~El~~~l-~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+|+.||.|++|+|+.+||+.++ ..+| ++++++..+|..+|.|+||.|+|+||+.+|..
T Consensus 257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~ 318 (323)
T 1ij5_A 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (323)
T ss_dssp HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 99999999999999999999999 8888 67889999999999999999999999999874
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-18 Score=166.40 Aligned_cols=137 Identities=20% Similarity=0.395 Sum_probs=118.3
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh----CCCCCHHHHH----HHHHccCCCCCcceehHHHHHHHHHh------
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV----GANLMDSEID----GLMQAGDIDNSGTMDYGEFIAAMLHL------ 411 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l----g~~~~~~~i~----~l~~~~D~d~~g~I~f~eF~~~~~~~------ 411 (489)
..++.+|..+|.|++|.|+.+||..++..+ |..++..++. .+++.+|.|++|.|+|+||+..+...
T Consensus 104 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~ 183 (272)
T 2be4_A 104 VEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQ 183 (272)
T ss_dssp HHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTT
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhh
Confidence 457889999999999999999999999988 8888888775 49999999999999999998876420
Q ss_pred ------hhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC------CCHHHHHH----HHHHhcCCCCCceeHHHHH
Q 040003 412 ------NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------LDDTQLED----IIREVDQDNDGRIDYSEFV 475 (489)
Q Consensus 412 ------~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------~~~~~~~~----~~~~~d~d~dG~I~~~eF~ 475 (489)
......+.+..+|+.+|+|++|+|+.+||+.++..++ +++++++. +|..+|.|+||.|+|+||+
T Consensus 184 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~ 263 (272)
T 2be4_A 184 FKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELA 263 (272)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHH
T ss_pred hhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 1223457789999999999999999999999998763 68888877 9999999999999999999
Q ss_pred HHHHhCC
Q 040003 476 AMMQDSG 482 (489)
Q Consensus 476 ~~~~~~~ 482 (489)
.+|...+
T Consensus 264 ~~~~~~p 270 (272)
T 2be4_A 264 LCLGLKH 270 (272)
T ss_dssp HHTTCCC
T ss_pred HHHccCC
Confidence 9987543
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.75 E-value=8.2e-19 Score=166.98 Aligned_cols=141 Identities=21% Similarity=0.466 Sum_probs=119.5
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH----HhCC--CCCHHHHHHH----HHccCCCCCcceehHHHHHHHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ----RVGA--NLMDSEIDGL----MQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~----~lg~--~~~~~~i~~l----~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
++..+..+++.+|..+|.|++|.|+.+||..+|+ .+|. .++..++..+ |..+|.|++|.|+|+||+.++.
T Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~ 84 (272)
T 2be4_A 5 FANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMIL 84 (272)
T ss_dssp CCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHS
T ss_pred HHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHh
Confidence 3444566799999999999999999999999999 8998 8898888764 4788999999999999998842
Q ss_pred -----------HhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc----C--CCHHHHH----HHHHHhcCCCCCc
Q 040003 410 -----------HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF----G--LDDTQLE----DIIREVDQDNDGR 468 (489)
Q Consensus 410 -----------~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g--~~~~~~~----~~~~~~d~d~dG~ 468 (489)
........+.+..+|+.+|.|++|+|+.+||..++..+ | +++.++. .+++.+|.|+||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~ 164 (272)
T 2be4_A 85 PQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGR 164 (272)
T ss_dssp CHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSE
T ss_pred hhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCc
Confidence 22223446789999999999999999999999999876 5 6777765 4999999999999
Q ss_pred eeHHHHHHHHHh
Q 040003 469 IDYSEFVAMMQD 480 (489)
Q Consensus 469 I~~~eF~~~~~~ 480 (489)
|+|+||+.+|..
T Consensus 165 i~~~ef~~~~~~ 176 (272)
T 2be4_A 165 LDLNDLARILAL 176 (272)
T ss_dssp EEHHHHGGGSCC
T ss_pred CcHHHHHHHHhh
Confidence 999999988753
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-18 Score=170.09 Aligned_cols=138 Identities=22% Similarity=0.407 Sum_probs=124.4
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
...++.+++..++.+|..+|.|++|+|+..||..+|..+|..++..++..++..+|.|++|.|+|.+|+.++ ..
T Consensus 113 ~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~------~~ 186 (323)
T 1ij5_A 113 KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA------ND 186 (323)
T ss_dssp CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSH------HH
T ss_pred HHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhh------hH
Confidence 356888999999999999999999999999999999999999999999999999999999999999998654 23
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHH-HHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED-IIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~-~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...+..+|+.||.|++|+|+.+||..+|....+++.++.. ++..+|.|+||.|+|+||+.+|..
T Consensus 187 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~ 251 (323)
T 1ij5_A 187 LAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLC 251 (323)
T ss_dssp HHTSCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHH
Confidence 4567789999999999999999999999333377889999 999999999999999999998864
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.5e-17 Score=133.19 Aligned_cols=102 Identities=30% Similarity=0.500 Sum_probs=91.1
Q ss_pred hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--C
Q 040003 375 VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G--L 449 (489)
Q Consensus 375 lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g--~ 449 (489)
++..+++.++..+++.+|. +|.|+|+||+.++.. .....+.++.+|+.||+|++|+|+.+||+.++..+ | +
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~ 77 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence 4556889999999999987 899999999998753 23456789999999999999999999999999987 6 6
Q ss_pred CHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 450 ~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++++++.+++.+|.|+||.|+|+||+.+|+.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 8999999999999999999999999999975
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-17 Score=132.86 Aligned_cols=102 Identities=27% Similarity=0.483 Sum_probs=91.8
Q ss_pred HhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--
Q 040003 374 RVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G-- 448 (489)
Q Consensus 374 ~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g-- 448 (489)
++|..+++.++..+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|+|+.+||+.++..+ |
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARA 77 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCC
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHc--ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCC
Confidence 4688899999999999998 8899999999987742 23456789999999999999999999999999988 5
Q ss_pred CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 449 ~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 78 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 78 LTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 7899999999999999999999999999875
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-17 Score=135.17 Aligned_cols=101 Identities=23% Similarity=0.459 Sum_probs=91.2
Q ss_pred hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--C
Q 040003 375 VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G--L 449 (489)
Q Consensus 375 lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g--~ 449 (489)
++..+++.++..+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||+|++|+|+.+||+.++..+ | +
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~ 78 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL 78 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence 567789999999999998 7999999999988753 23456789999999999999999999999999988 5 7
Q ss_pred CHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 450 ~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
++++++.+++.+|.|+||.|+|+||+.+|+
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 899999999999999999999999999985
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4e-17 Score=132.58 Aligned_cols=101 Identities=30% Similarity=0.467 Sum_probs=90.8
Q ss_pred HhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--
Q 040003 374 RVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G-- 448 (489)
Q Consensus 374 ~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g-- 448 (489)
.+|. +++.++..+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||+|++|+|+.+||+.++..+ |
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 4688 89999999999998 7899999999988742 23446789999999999999999999999999988 5
Q ss_pred CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 449 ~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 77 LTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 7899999999999999999999999999885
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-17 Score=132.88 Aligned_cols=102 Identities=25% Similarity=0.417 Sum_probs=90.7
Q ss_pred hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--C
Q 040003 375 VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G--L 449 (489)
Q Consensus 375 lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g--~ 449 (489)
+|..+++.++..+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|+|+.+||+.++..+ | +
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence 455678999999999998 8999999999988742 23456789999999999999999999999999988 5 7
Q ss_pred CHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 450 ~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 8999999999999999999999999999874
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-17 Score=134.49 Aligned_cols=103 Identities=25% Similarity=0.465 Sum_probs=91.9
Q ss_pred HhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--
Q 040003 374 RVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G-- 448 (489)
Q Consensus 374 ~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g-- 448 (489)
++|..+++.++..+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||+|++|+|+.+||+.++..+ |
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD 77 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCC
Confidence 4677789999999999998 8899999999988732 23456789999999999999999999999999988 5
Q ss_pred CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 449 LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 449 ~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 78 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 78 LTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 78999999999999999999999999999875
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-17 Score=176.01 Aligned_cols=131 Identities=12% Similarity=0.166 Sum_probs=64.8
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
.+++++|+.+|.|++|+|+.+||+.+|+.+|..+++.++..+|+.+|.|++|.|+|+||+.++..+.. ++++..+|+
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~aF~ 87 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRAFE 87 (624)
T ss_dssp ---------------------------------------------------------CTTHHHHHHTC---CHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999998865432 467899999
Q ss_pred cccccCCCcccHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC----CCCceeHHHHHHHHHh
Q 040003 426 YFDKDGSGYITPDELQTACQQF-G---LDDTQLEDIIREVDQD----NDGRIDYSEFVAMMQD 480 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~-g---~~~~~~~~~~~~~d~d----~dG~I~~~eF~~~~~~ 480 (489)
.||.| +|+|+.+||+.+|... | ++++++++||+++|.| ++|.|+|+||+.+|..
T Consensus 88 ~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 88 EAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp HHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred HhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 99986 9999999999999865 3 7899999999999998 7999999999999974
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.67 E-value=8.7e-17 Score=130.57 Aligned_cols=101 Identities=25% Similarity=0.443 Sum_probs=89.6
Q ss_pred hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--C
Q 040003 375 VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G--L 449 (489)
Q Consensus 375 lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g--~ 449 (489)
++..+++.++..+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|+|+.+||+.++..+ | +
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 456788999999999998 8899999999988742 23446788999999999999999999999999988 4 7
Q ss_pred CHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 450 ~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 899999999999999999999999999875
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-17 Score=183.01 Aligned_cols=134 Identities=25% Similarity=0.335 Sum_probs=108.6
Q ss_pred ccHHH-HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC--------CCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 340 LSEEE-IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA--------NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 340 ~~~~~-~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~--------~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
+++++ ..+++++|..+| +++|.|+.+||+.+|..++. .++..++..+++.+|.|++|.|+|+||+.++..
T Consensus 527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~ 605 (900)
T 1qxp_A 527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR 605 (900)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 44444 788999999999 99999999999999988875 788999999999999999999999999988864
Q ss_pred hhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 411 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
. ++++.+|+.||.|++|+|+.+||+.+|+.+| +++++++.+++.+| |+||.|+|+||+.+|...
T Consensus 606 ~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~ 671 (900)
T 1qxp_A 606 I------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL 671 (900)
T ss_dssp H------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH
T ss_pred H------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH
Confidence 3 5688999999999999999999999999998 78999999999999 999999999999998743
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=9e-17 Score=177.68 Aligned_cols=137 Identities=23% Similarity=0.402 Sum_probs=122.7
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhhHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQRED 418 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~~~ 418 (489)
++.+++..++.+|..+|.|++|+|+.+||..+|..+|..+++.++..+|..+|.|++|.|+|+||+.++.... .....+
T Consensus 719 l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~ 798 (863)
T 1sjj_A 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTAD 798 (863)
T ss_dssp SSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHH
Confidence 4556788999999999999999999999999999999999999999999999999999999999999886543 233457
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCC-----CCCceeHHHHHHHHHhCC
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQD-----NDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d-----~dG~I~~~eF~~~~~~~~ 482 (489)
.+..+|+.| .|++|+|+.+||+.+| ++++++.+++.+|.| +||.|+|+||+.+|...+
T Consensus 799 ~l~~aF~~~-~d~~G~Is~~El~~~l-----~~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~~ 861 (863)
T 1sjj_A 799 QVMASFKIL-AGDKNYITVDELRREL-----PPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGES 861 (863)
T ss_dssp HHHHHHHGG-GTSSSEEEHHHHHHHS-----CHHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCCS
T ss_pred HHHHHHHHH-hCCCCcCcHHHHHHHC-----CHHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcCC
Confidence 889999999 8999999999999986 488999999999987 799999999999997543
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.65 E-value=9.1e-17 Score=136.14 Aligned_cols=99 Identities=17% Similarity=0.311 Sum_probs=67.1
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
.+.++|+.+|.|++|.|+|+||+.++... ......+.++.+|+.||+|++|+|+.+||+.++..+| +++++++.++
T Consensus 4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~ 83 (135)
T 3h4s_E 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV 83 (135)
T ss_dssp ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 45678999999999999999999988653 3334567899999999999999999999999999888 5899999999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+|.|+||.|+|+||+.+|.+.
T Consensus 84 ~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 84 REGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHHH
T ss_pred HHhCCCCCCCCcHHHHHHHHHHh
Confidence 99999999999999999999754
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.62 E-value=6.7e-17 Score=131.26 Aligned_cols=101 Identities=25% Similarity=0.402 Sum_probs=89.5
Q ss_pred hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--C
Q 040003 375 VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G--L 449 (489)
Q Consensus 375 lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g--~ 449 (489)
++..+++.++..+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|+|+.+||+.++..+ | +
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL 77 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence 567889999999999998 8899999999988732 12335678899999999999999999999999988 5 6
Q ss_pred CHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 450 ~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 78 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 78 TASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp CTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 789999999999999999999999999885
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.4e-15 Score=133.60 Aligned_cols=125 Identities=20% Similarity=0.305 Sum_probs=109.7
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
..+..+|..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+.+||..++........++.+..+|+
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~ 136 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMR 136 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 345677899999999999999999988764 67899999999999999999999998876544455778889999
Q ss_pred cccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCc--eeHHHHHHHHHh
Q 040003 426 YFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGR--IDYSEFVAMMQD 480 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~--I~~~eF~~~~~~ 480 (489)
.+|.|++|.|+.+||..++... ..+.++|+.+|.|++|. |+|+||+.++..
T Consensus 137 ~~D~d~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 137 KFDRQRRGSLGFDDYVELSIFV----CRVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp HHCTTCSSSBCHHHHHHHHHHH----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred HhCCCCCCeEeHHHHHHHHHHH----HHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 9999999999999999998763 67889999999999999 789999998863
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-15 Score=138.52 Aligned_cols=126 Identities=17% Similarity=0.162 Sum_probs=112.1
Q ss_pred hhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC-CCcceehHHHHHHHHHhhhh-hhHHHHHhhcccccccC
Q 040003 354 MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID-NSGTMDYGEFIAAMLHLNKI-QREDHMYAAFSYFDKDG 431 (489)
Q Consensus 354 ~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d-~~g~I~f~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~ 431 (489)
.++.+++|+|+.+||..+++.++ ++..++..+|..+|.+ ++|.|+++||..++...... .....+..+|+.+|.|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~ 84 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL 84 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence 37889999999999999999987 5889999999999998 79999999999988765332 45677899999999999
Q ss_pred CCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 432 SGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 432 ~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+|.|+.+||..++..++ .+.+++..+|+.+|.|++|.|+++||..+|...
T Consensus 85 ~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 85 DGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp CSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 99999999999998876 567889999999999999999999999999763
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.60 E-value=9.2e-15 Score=128.98 Aligned_cols=124 Identities=24% Similarity=0.450 Sum_probs=108.6
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.+..+|..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+.+||..++........++.+..+|+.
T Consensus 45 ~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 118 (172)
T 2znd_A 45 TVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 118 (172)
T ss_dssp HHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 45567888999999999999999988763 678899999999999999999999988765444456778899999
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcee--HHHHHHHHHh
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRID--YSEFVAMMQD 480 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~--~~eF~~~~~~ 480 (489)
+|.|++|.|+.+||..++... ..+..+|+.+|.|+||.|+ |+||+.++..
T Consensus 119 ~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 119 FDRQGRGQIAFDDFIQGCIVL----QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HCTTCSSSEEHHHHHHHHHHH----HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred hCCCCCCcCcHHHHHHHHHHH----HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 999999999999999998764 6889999999999999995 8999998864
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.59 E-value=2.2e-15 Score=162.13 Aligned_cols=128 Identities=12% Similarity=0.207 Sum_probs=98.6
Q ss_pred HHHHHHHHh--hhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCC-------CCCcceehHHHHHHHHHhhhhh
Q 040003 345 IAGLKEMFK--MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI-------DNSGTMDYGEFIAAMLHLNKIQ 415 (489)
Q Consensus 345 ~~~l~~~F~--~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~-------d~~g~I~f~eF~~~~~~~~~~~ 415 (489)
...++++|. .+|.|++|+|+..||..+|+. .+.+++.+++.+|. +++|.|+|+||+.++..+.
T Consensus 145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~--- 216 (799)
T 2zkm_X 145 STFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC--- 216 (799)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc---
Confidence 456888999 899999999999999998855 47899999999985 8889999999999886543
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHc-C-----------CCHHHHHHHHHHhcCC----CCCceeHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQF-G-----------LDDTQLEDIIREVDQD----NDGRIDYSEFVAMMQ 479 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g-----------~~~~~~~~~~~~~d~d----~dG~I~~~eF~~~~~ 479 (489)
.+++++.+|+.||.|++|+|+.+||+.+|..+ | ++++++++||+++|.| ++|.|+|+||+.+|.
T Consensus 217 ~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~ 296 (799)
T 2zkm_X 217 PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLC 296 (799)
T ss_dssp CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhccc
Confidence 34678999999999999999999999999987 3 4678899999999999 899999999999997
Q ss_pred h
Q 040003 480 D 480 (489)
Q Consensus 480 ~ 480 (489)
.
T Consensus 297 S 297 (799)
T 2zkm_X 297 G 297 (799)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=127.49 Aligned_cols=121 Identities=12% Similarity=0.231 Sum_probs=104.5
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh----hhhhhHHHHHh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL----NKIQREDHMYA 422 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~----~~~~~~~~l~~ 422 (489)
.++.+|..+|.|++|+|+.+||..++..+ .++..+|+.+| |++|.|+.+||..++... .....++.+..
T Consensus 47 ~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~ 119 (174)
T 2i7a_A 47 ECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHL 119 (174)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHH
Confidence 46678889999999999999999988764 57899999999 999999999999988765 33345677888
Q ss_pred hcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCC-ceeHHHHHHHHH
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG-RIDYSEFVAMMQ 479 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG-~I~~~eF~~~~~ 479 (489)
+++.+| |++|.|+.+||..++... ..+.++|+.+|.|++| .++++||+.++.
T Consensus 120 l~~~~d-d~dG~I~~~EF~~~~~~~----~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 120 VTLRYS-DSVGRVSFPSLVCFLMRL----EAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHS-CTTSEECHHHHHHHHHHH----HHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHc-CCCCeEcHHHHHHHHHHH----HHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 999999 999999999999998763 6788999999999999 449999998864
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.57 E-value=3.8e-15 Score=164.86 Aligned_cols=142 Identities=16% Similarity=0.297 Sum_probs=113.1
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh-----------
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK----------- 413 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~----------- 413 (489)
+..++.+|+.+|.|++|+|+.+||+.+|..+|..+++.+++.++..+| |++|.|+|+||+.++.....
T Consensus 606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d 684 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPE 684 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 467889999999999999999999999999999999999999999999 99999999999988753210
Q ss_pred ------------------------------------------hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---
Q 040003 414 ------------------------------------------IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--- 448 (489)
Q Consensus 414 ------------------------------------------~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--- 448 (489)
....+.++.+|+.+|.+ +|.|+.+||+.+|..++
T Consensus 685 ~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~~ 763 (900)
T 1qxp_A 685 NTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTRH 763 (900)
T ss_dssp CCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----C
T ss_pred CCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhcccc
Confidence 00123466788888887 88899999999987643
Q ss_pred -------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcccc
Q 040003 449 -------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVF 488 (489)
Q Consensus 449 -------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~f 488 (489)
++.++++.|++.+|.|+||.|+|+||+.++........+|
T Consensus 764 ~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~~~l~~~F 810 (900)
T 1qxp_A 764 PDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIY 810 (900)
T ss_dssp CSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHHHHHSSCC
T ss_pred cccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999999999999999986543333343
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.55 E-value=8.2e-15 Score=131.75 Aligned_cols=119 Identities=16% Similarity=0.322 Sum_probs=96.4
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh------------
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK------------ 413 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~------------ 413 (489)
..+..+|..+|.|++|.|+..||..++..++...+..++..+|+.+|.|++|.|+++||..++.....
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~ 142 (193)
T 1bjf_A 63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE 142 (193)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCccc
Confidence 34678999999999999999999999999988888899999999999999999999999988865310
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI 469 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I 469 (489)
...++.+..+|+.+|.|++|.|+.+||..++.. +.++.++| .+|.|+||+|
T Consensus 143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~----~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 143 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS----DPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH----CTHHHHTT-CC--------
T ss_pred ccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc----CHHHHHHh-ccCCCCCCCC
Confidence 122456889999999999999999999999864 55788999 9999999986
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.54 E-value=9e-16 Score=127.46 Aligned_cols=103 Identities=25% Similarity=0.346 Sum_probs=55.7
Q ss_pred HHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHH-----HHHHhh-hhhhHHHHHhhcccccccCCCcccHHHHHHHH
Q 040003 371 GLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA-----AMLHLN-KIQREDHMYAAFSYFDKDGSGYITPDELQTAC 444 (489)
Q Consensus 371 ~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~-----~~~~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l 444 (489)
+|+.+|.++++.++..++..+ +|.|+|+||+. ++.... .....++++.+|+.|| |+|+.+||+.+|
T Consensus 1 ~lr~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l 72 (123)
T 2kld_A 1 GSTAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDL 72 (123)
T ss_dssp ------------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHT
T ss_pred ChhhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHH
Confidence 367889999999999999866 78999999998 554322 2233456889999998 999999999999
Q ss_pred HHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 445 QQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 445 ~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+|.++++++++++.+|.|+||.|+|+||+.+|...
T Consensus 73 ~~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~ 109 (123)
T 2kld_A 73 KGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109 (123)
T ss_dssp TTCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCSCTT
T ss_pred HHhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999998654
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.5e-14 Score=130.76 Aligned_cols=129 Identities=16% Similarity=0.390 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh------hhh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN------KIQ 415 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~------~~~ 415 (489)
......+..+|..+|.|++|.|+.+||..++..++......++..+|+.+|.|++|.|+++||..++.... ...
T Consensus 53 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~ 132 (211)
T 2ggz_A 53 QKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLS 132 (211)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCT
T ss_pred cchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCcccc
Confidence 34455688999999999999999999999999988878888999999999999999999999999887652 223
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.++.+..+|+.+|.|++|.|+.+||..++.. ..++.+++.. .++|+||+.+|...
T Consensus 133 ~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~----~~~~~~~~~~-------~~d~~~f~~~~~~~ 187 (211)
T 2ggz_A 133 PEEFINLVFHKIDINNDGELTLEEFINGMAK----DQDLLEIVYK-------SFDFSNVLRVICNG 187 (211)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT----TTTTHHHHHH-------HSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh----CHHHHHHHhc-------cCCHHHHHHHHhcC
Confidence 4566889999999999999999999999874 5567777773 35699999999754
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-15 Score=127.96 Aligned_cols=93 Identities=25% Similarity=0.384 Sum_probs=51.9
Q ss_pred HHHHccCCCCCcceehHHHHHHHHHhh-----hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc----------CCC
Q 040003 386 GLMQAGDIDNSGTMDYGEFIAAMLHLN-----KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF----------GLD 450 (489)
Q Consensus 386 ~l~~~~D~d~~g~I~f~eF~~~~~~~~-----~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----------g~~ 450 (489)
.+|+.+|.|++|.|+|+||+.++.... ....++.++.+|+.||.|++|+|+.+||+.++..+ .++
T Consensus 31 ~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s 110 (143)
T 3a4u_B 31 SQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 110 (143)
T ss_dssp --------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CC
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCC
Confidence 466777777777777777776664331 11345678889999999999999999999998766 267
Q ss_pred HHHHHHHH----HHhcCCCCCceeHHHHHHHH
Q 040003 451 DTQLEDII----REVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 451 ~~~~~~~~----~~~d~d~dG~I~~~eF~~~~ 478 (489)
++++.+++ +.+|.|+||+|+|+||+.+|
T Consensus 111 ~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 111 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 88876655 99999999999999999876
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.9e-14 Score=127.01 Aligned_cols=121 Identities=20% Similarity=0.243 Sum_probs=106.4
Q ss_pred CCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC-CCcceehHHHHHHHHHhhh-hhhHHHHHhhcccccccCCCcc
Q 040003 358 DNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID-NSGTMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYI 435 (489)
Q Consensus 358 d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d-~~g~I~f~eF~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I 435 (489)
+.+|.++.+++..+.+.++ ++..++..+|..+|.| ++|.|+++||..++..... ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI 80 (190)
T ss_dssp CSSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCE
T ss_pred cccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeE
Confidence 4578999999999988875 4778999999999999 8999999999998876522 2345678899999999999999
Q ss_pred cHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 436 TPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 436 ~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+||..++..++ .+.+++..+|+.+|.|++|.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 81 DFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp EHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred eHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 9999999998776 56889999999999999999999999999875
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.4e-14 Score=130.07 Aligned_cols=123 Identities=16% Similarity=0.236 Sum_probs=106.6
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.+..+|..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+.+||..++.......+.+.+..+|+.
T Consensus 88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~ 161 (220)
T 3sjs_A 88 TALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRL 161 (220)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45667888999999999999999998775 678999999999999999999999988766555566788899999
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHh-cCCCCC------ceeHHHHHHHHHh
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREV-DQDNDG------RIDYSEFVAMMQD 480 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~-d~d~dG------~I~~~eF~~~~~~ 480 (489)
+| |++|.|+.+||..++..+ ..+.++++.+ |.+++| .|+|+||+.++..
T Consensus 162 ~d-d~dg~I~~~eF~~~~~~l----~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 162 FA-RGMAFCDLNCWIAICAFA----AQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HC---CCSEEHHHHHHHHHHH----HHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred hc-CCCCcCcHHHHHHHHHHH----HHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 99 999999999999998764 3688999999 999999 8999999998864
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=9.5e-14 Score=131.35 Aligned_cols=141 Identities=19% Similarity=0.156 Sum_probs=110.8
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++...+|.|+++.||++.. .++.+++|+........ ...+.+|+++|+.|..+.++.++++++.+.+..|+||
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 488888899999999999864 36789999986432111 2358899999999966788999999999999999999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS----------------------------------------- 247 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~----------------------------------------- 247 (489)
||++|.+|.+.+ .+......++.++..+|..||+
T Consensus 90 e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 90 SEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp ECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred EecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 999999987652 1222344678889999999998
Q ss_pred ------------------CCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 248 ------------------LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 248 ------------------~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
..++|+|++|.|||+ +....+.|+||+.+...
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEE---ETTEEEEECCCTTCEEE
T ss_pred CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEE---ECCcEEEEEEchhcccC
Confidence 458999999999999 33444679999987543
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=121.89 Aligned_cols=121 Identities=18% Similarity=0.282 Sum_probs=103.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
..+..+|..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+.+||..++........++.+..+|+
T Consensus 47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 120 (173)
T 1alv_A 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIR 120 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 346677889999999999999999988763 67899999999999999999999988876544445677888999
Q ss_pred cccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 426 YFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
.+| |++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+ |.+.|
T Consensus 121 ~~d-d~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~-~~~~l 167 (173)
T 1alv_A 121 RYS-DEGGNMDFDNFISCLVR----LDAMFRAFKSLDKDGTGQIQVN-IQEWL 167 (173)
T ss_dssp HHT-CSSSCBCHHHHHHHHHH----HHHHHHHHHHHSSSCCSEEEEE-HHHHH
T ss_pred Hhc-CCCCcCcHHHHHHHHHH----HHHHHHHHHHhCCCCCCeecHh-HHHHH
Confidence 999 99999999999999876 3688999999999999999855 44443
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.47 E-value=6.3e-13 Score=116.55 Aligned_cols=122 Identities=23% Similarity=0.335 Sum_probs=103.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
..+..+|..+|.|++|.|+.+||..++... .++..+|+.+|.|++|.|+.+||..++........++.+..+|+
T Consensus 42 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 115 (167)
T 1gjy_A 42 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAK 115 (167)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 345677889999999999999999988764 67899999999999999999999988876544445667788888
Q ss_pred cccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeH--HHHHHHHH
Q 040003 426 YFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDY--SEFVAMMQ 479 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~--~eF~~~~~ 479 (489)
.+ |++|.|+.+||..++... .++..+|+.+|.|++|.|+. .+|+.++.
T Consensus 116 ~~--d~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~~~~~l~~~~ 165 (167)
T 1gjy_A 116 RY--STSGKITFDDYIACCVKL----RALTDSFRRRDSAQQGMVNFSYDDFIQCVM 165 (167)
T ss_dssp HT--CBTTBEEHHHHHHHHHHH----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred Hh--CcCCcCcHHHHHHHHHHH----HHHHHHHHHhCCCCCeeEEeeHHHHHHHHH
Confidence 88 899999999999998764 67889999999999999996 56666553
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.3e-14 Score=111.99 Aligned_cols=63 Identities=40% Similarity=0.788 Sum_probs=59.1
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.++++++|+.||+|++|+|+.+||+.+|+.+| +++++++++|+.+|.|+||.|+|+||+.+|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 45788999999999999999999999999998 6899999999999999999999999999873
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=122.60 Aligned_cols=121 Identities=21% Similarity=0.267 Sum_probs=103.4
Q ss_pred CCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC-CCcceehHHHHHHHHHhhh-hhhHHHHHhhcccccccCCCcc
Q 040003 358 DNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID-NSGTMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYI 435 (489)
Q Consensus 358 d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d-~~g~I~f~eF~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I 435 (489)
++.++++.+++..+.+.. .++.+++..+++.+|.+ ++|.|+++||..++..... ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 1fpw_A 3 AKTSKLSKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI 80 (190)
T ss_dssp CCSCCSTTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEE
T ss_pred cccCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcE
Confidence 456788888888766553 46889999999999987 8999999999998876521 2334568899999999999999
Q ss_pred cHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 436 TPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 436 ~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+||..++..++ .+.+++..+|+.+|.|++|.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 81 HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp CHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred eHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 9999999998876 56889999999999999999999999999976
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.6e-13 Score=117.15 Aligned_cols=119 Identities=18% Similarity=0.302 Sum_probs=100.7
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.+..+|..+|.|++|.|+.+||..++... .++..+|+.+|.|++|.|+.+||..++........++.+..+|+.
T Consensus 41 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 114 (165)
T 1k94_A 41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45677889999999999999999988764 678899999999999999999999888765444456677888888
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+ |++|.|+.+||..++... .++.++|+.+|.|++|.|+.+ |...|
T Consensus 115 ~--d~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~-~~~~l 159 (165)
T 1k94_A 115 Y--SKNGRIFFDDYVACCVKL----RALTDFFRKRDHLQQGSANFI-YDDFL 159 (165)
T ss_dssp H--CBTTBCBHHHHHHHHHHH----HHHHHHHHTTCTTCCSEEEEE-HHHHH
T ss_pred h--CCCCeEcHHHHHHHHHHH----HHHHHHHHHhCCCCCCeEeee-HHHHH
Confidence 8 899999999999998764 688899999999999999665 55444
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.45 E-value=6.6e-13 Score=119.95 Aligned_cols=121 Identities=22% Similarity=0.334 Sum_probs=103.7
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.+..+|..+|.|++|.|+.+||..++... .++..+|+.+|.|++|.|+.+||..++........++.+..+|+.
T Consensus 74 ~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~ 147 (198)
T 1juo_A 74 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR 147 (198)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45678889999999999999999988764 678999999999999999999999888765444456778888888
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeH--HHHHHHHH
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDY--SEFVAMMQ 479 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~--~eF~~~~~ 479 (489)
+ |++|.|+.+||..++..+ .++..+|+.+|.|++|.|+. .+|+.++.
T Consensus 148 ~--d~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~is~~~~~~l~~~~ 196 (198)
T 1juo_A 148 Y--STNGKITFDDYIACCVKL----RALTDSFRRRDTAQQGVVNFPYDDFIQCVM 196 (198)
T ss_dssp T--CSSSSEEHHHHHHHHHHH----HHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred h--CCCCeEcHHHHHHHHHHH----HHHHHHHHHhCCCCCCeEeecHHHHHHHHh
Confidence 8 899999999999998764 67889999999999999987 77776653
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.43 E-value=2.9e-13 Score=120.51 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=96.7
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHccCC-CCCcceehHHHHHHHHHhhhh-hhHHHHHhhcccccccCCCcccHHHH
Q 040003 363 ITLEELKKGLQRVGANLMDSEIDGLMQAGDI-DNSGTMDYGEFIAAMLHLNKI-QREDHMYAAFSYFDKDGSGYITPDEL 440 (489)
Q Consensus 363 i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~-d~~g~I~f~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~~G~I~~~El 440 (489)
++.+||..+++..+ ++..++..+++.+|. |++|.|+++||..++...... .....+..+|+.+|.|++|.|+.+||
T Consensus 1 l~~~el~~l~~~~~--~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 78 (183)
T 1s6c_A 1 HRPEGLEQLEAQTN--FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 78 (183)
T ss_dssp -----CHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred CChHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 35567777777654 478889999999888 899999999999988765433 45678889999999999999999999
Q ss_pred HHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 441 QTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 441 ~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..++..++ .+.+++..+|+.+|.|++|.|+++||..++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~ 121 (183)
T 1s6c_A 79 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 121 (183)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 99997764 567889999999999999999999999999753
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=118.27 Aligned_cols=114 Identities=24% Similarity=0.405 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-------hh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-------KI 414 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-------~~ 414 (489)
......+..+|..+|.|++|.|+..||..++..++...+..++..+|+.+|.|++|.|+++||..++.... ..
T Consensus 48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~ 127 (198)
T 2r2i_A 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAM 127 (198)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCC
T ss_pred cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchh
Confidence 44456688999999999999999999999999998888889999999999999999999999999887553 22
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHH
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIR 459 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~ 459 (489)
..++.+..+|+.+|.|++|.|+.+||..++.. +.++.+++.
T Consensus 128 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~----~~~~~~~~~ 168 (198)
T 2r2i_A 128 TAEEFTNMVFDKIDINGDGELSLEEFMEGVQK----DEVLLDILT 168 (198)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT----CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc----CHHHHHHHh
Confidence 33456889999999999999999999998853 445555554
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.8e-13 Score=107.75 Aligned_cols=72 Identities=28% Similarity=0.601 Sum_probs=68.1
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
...++.+++.+++++|+.+|.|++|+|+.+||+.+|+.+|..+++.+++.+++.+|.|++|.|+|+||+.+|
T Consensus 27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 346788899999999999999999999999999999999999999999999999999999999999999865
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.39 E-value=5e-13 Score=123.30 Aligned_cols=121 Identities=16% Similarity=0.138 Sum_probs=98.4
Q ss_pred CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC-CCcceehHHHHHHHHHhhh-hhhHHHHHhhcccccccCCCccc
Q 040003 359 NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID-NSGTMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYIT 436 (489)
Q Consensus 359 ~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d-~~g~I~f~eF~~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~I~ 436 (489)
..++++.+++..+++..+ ++..++..+++.+|.+ ++|.|+++||..++..+.. ......+..+|+.+|.|++|.|+
T Consensus 30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~ 107 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK 107 (224)
T ss_dssp --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBC
T ss_pred CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEe
Confidence 356888899999888766 6889999999999884 9999999999998876533 24567788999999999999999
Q ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 437 PDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 437 ~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+||..++..++ ..++++..+|+.+|.|+||.|+++||..+|...
T Consensus 108 ~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~ 154 (224)
T 1s1e_A 108 FEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 154 (224)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence 999999998764 567889999999999999999999999999753
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.6e-12 Score=118.83 Aligned_cols=135 Identities=14% Similarity=0.206 Sum_probs=105.2
Q ss_pred HHHHHHHHhhhcC-CCCCCccHHHHHHHHHHhCCC--------CC-----HHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 345 IAGLKEMFKMIDT-DNSGYITLEELKKGLQRVGAN--------LM-----DSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 345 ~~~l~~~F~~~D~-d~~g~i~~~el~~~l~~lg~~--------~~-----~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
+..+.++|+.... .++..++..++...|..+... .. ..-+..+|+.+|.|++|.|+|.||+.++..
T Consensus 81 l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~ 160 (261)
T 1eg3_A 81 LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS 160 (261)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHH
Confidence 3344556655433 356688999988776655211 11 233456899999999999999999999988
Q ss_pred hhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHH-------cC--------CCHHHHHHHHHHhcCCCCCceeHHHHH
Q 040003 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ-------FG--------LDDTQLEDIIREVDQDNDGRIDYSEFV 475 (489)
Q Consensus 411 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-------~g--------~~~~~~~~~~~~~d~d~dG~I~~~eF~ 475 (489)
+.....+++++.+|++|| |+||+|+.+||..+++. +| -.+..++.+|+.+| +||+|+.+||+
T Consensus 161 l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl 237 (261)
T 1eg3_A 161 LCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFL 237 (261)
T ss_dssp TSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHH
T ss_pred HcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHH
Confidence 888888999999999999 99999999999999865 23 12566889999986 89999999999
Q ss_pred HHHHhCC
Q 040003 476 AMMQDSG 482 (489)
Q Consensus 476 ~~~~~~~ 482 (489)
..++..+
T Consensus 238 ~~~~~dp 244 (261)
T 1eg3_A 238 DWMRLEP 244 (261)
T ss_dssp HHHHTCC
T ss_pred HHHHhCc
Confidence 9988654
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=116.83 Aligned_cols=120 Identities=19% Similarity=0.214 Sum_probs=101.8
Q ss_pred CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC-CCcceehHHHHHHHHHh-hhhhhHHHHHhhcccccccCCCccc
Q 040003 359 NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID-NSGTMDYGEFIAAMLHL-NKIQREDHMYAAFSYFDKDGSGYIT 436 (489)
Q Consensus 359 ~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d-~~g~I~f~eF~~~~~~~-~~~~~~~~l~~~F~~~D~d~~G~I~ 436 (489)
..+.++.+++..+.... ..+..++..+++.+|.+ ++|.|+++||..++... ........+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~ 81 (190)
T 1g8i_A 4 SNSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE 81 (190)
T ss_dssp CCCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred ccccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence 34578888888877654 45789999999999988 89999999999988765 1123455688999999999999999
Q ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 437 PDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 437 ~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+||..++..++ .+.+++..+|+.+|.|++|.|+++||..++..
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 82 FSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 999999998765 55778999999999999999999999999876
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.37 E-value=6.7e-14 Score=108.51 Aligned_cols=83 Identities=33% Similarity=0.516 Sum_probs=68.5
Q ss_pred CCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeH
Q 040003 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDY 471 (489)
Q Consensus 394 d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~ 471 (489)
|++|.|+|+|++... .+ .......++.+|+.||.|++|+|+.+||+.+++.+| ++++++..+++.+|.|++|.|+|
T Consensus 1 ~~~G~i~~~e~~~~~-~l-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~ 78 (87)
T 1s6j_A 1 HSSGHIDDDDKHMAE-RL-SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHHHSSS-SS-CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCccHHHHHH-HC-CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcH
Confidence 578999999943211 11 112234578999999999999999999999999998 68999999999999999999999
Q ss_pred HHHHHHH
Q 040003 472 SEFVAMM 478 (489)
Q Consensus 472 ~eF~~~~ 478 (489)
+||+.++
T Consensus 79 ~eF~~~~ 85 (87)
T 1s6j_A 79 GEFIAAT 85 (87)
T ss_dssp HHHTTCC
T ss_pred HHHHHHH
Confidence 9998764
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=102.57 Aligned_cols=64 Identities=22% Similarity=0.264 Sum_probs=60.2
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+++++|+.||+|++|+|+.+||+.+++.+|++++++.++++.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999999999999999998853
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.7e-12 Score=139.68 Aligned_cols=127 Identities=12% Similarity=0.212 Sum_probs=110.9
Q ss_pred HHHHHHHhh--hcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC-------CCcceehHHHHHHHHHhhhhhh
Q 040003 346 AGLKEMFKM--IDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID-------NSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 346 ~~l~~~F~~--~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d-------~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..++++|.. +|.|++|+|+.+|+..+|+. ...++..+++.+|.+ ++|.|+|+||+..+..+..
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~--- 221 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL--- 221 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC---
T ss_pred HHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC---
Confidence 467778887 89999999999999888765 467899999999987 7899999999998875432
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC------------CCHHHHHHHHHHhcCC----CCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG------------LDDTQLEDIIREVDQD----NDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------------~~~~~~~~~~~~~d~d----~dG~I~~~eF~~~~~~ 480 (489)
..+++.+|+.||.+++|+|+.+||+.+|...+ ++++++.+||++++.+ ++|.|+|++|..+|..
T Consensus 222 R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S 301 (885)
T 3ohm_B 222 RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG 301 (885)
T ss_dssp CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence 45789999999999999999999999998764 4678999999999999 7999999999999973
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.36 E-value=6.8e-13 Score=105.23 Aligned_cols=64 Identities=16% Similarity=0.333 Sum_probs=57.8
Q ss_pred HHHHHhhccccc-ccCC-CcccHHHHHHHHHH-c----C--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGS-GYITPDELQTACQQ-F----G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~-G~I~~~El~~~l~~-~----g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...+.++|+.|| +|++ |+|+.+||+.+|+. + | ++++++++||+.+|.|+||.|+|+||+.+|..
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 467889999997 8997 99999999999986 3 4 57999999999999999999999999999864
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=112.61 Aligned_cols=89 Identities=17% Similarity=0.323 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMY 421 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~ 421 (489)
.++..+++.+|..+|.|++|+|+.+||..+|..+|..+++.++..++..+|.|++|.|+|+||+.++... ...+.
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~ 118 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL 118 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 6788899999999999999999999999999999999999999999999999999999999999887533 34577
Q ss_pred hhcccccccCCCcc
Q 040003 422 AAFSYFDKDGSGYI 435 (489)
Q Consensus 422 ~~F~~~D~d~~G~I 435 (489)
.+|+.||.|++|..
T Consensus 119 ~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 119 RMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGCCCC-----
T ss_pred HHHHHHccCCCCCC
Confidence 89999999999984
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.35 E-value=8.8e-13 Score=113.58 Aligned_cols=89 Identities=21% Similarity=0.345 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMY 421 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~ 421 (489)
.+....++.+|+.+|.|++|+|+.+||+.+|+.+|..+++.++..++..+|.|++|.|+|+||+.++... ...+.
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~ 120 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL 120 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 5678889999999999999999999999999999999999999999999999999999999999988643 34578
Q ss_pred hhcccccccCCCcc
Q 040003 422 AAFSYFDKDGSGYI 435 (489)
Q Consensus 422 ~~F~~~D~d~~G~I 435 (489)
.+|+.||.|++|+-
T Consensus 121 ~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 121 KLVMMFEGKANESS 134 (150)
T ss_dssp HHHHC---------
T ss_pred HHHHHHcCCCCCCC
Confidence 99999999999984
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.8e-12 Score=117.89 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=91.4
Q ss_pred CCCCCCccHHHHHHHHHHhCCCCCH-HHHHHHHHccCCC--CCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCC
Q 040003 357 TDNSGYITLEELKKGLQRVGANLMD-SEIDGLMQAGDID--NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSG 433 (489)
Q Consensus 357 ~d~~g~i~~~el~~~l~~lg~~~~~-~~i~~l~~~~D~d--~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G 433 (489)
.|++|.++.+++..+....+....+ .++..+|..+|.| ++|.|+++||..++.. .....+..+..+|+.+|.|++|
T Consensus 11 ~~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g 89 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNG 89 (207)
T ss_dssp ----------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSS
T ss_pred hccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCC
Confidence 4778999999999988776543322 3467789999999 9999999999988754 2222334566799999999999
Q ss_pred cccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 434 YITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 434 ~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.|+.+||..++..++ ...+++..+|+.+|.|++|.|+++||..++.
T Consensus 90 ~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp EECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred eEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 999999999998765 2367799999999999999999999999985
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=109.94 Aligned_cols=99 Identities=23% Similarity=0.389 Sum_probs=85.8
Q ss_pred HHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHH---HcC--CCHHHHHHHH
Q 040003 384 IDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQ---QFG--LDDTQLEDII 458 (489)
Q Consensus 384 i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~---~~g--~~~~~~~~~~ 458 (489)
+..+|..+|.|++|.|+++||..++.........+.+..+|+.+|.|++|.|+.+||..++. ..+ .+..++..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 57789999999999999999999887665555677889999999999999999999999885 223 3466799999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+.+|.|++|.|+++||..++...+
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~~ 105 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKHG 105 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTT
T ss_pred HHHCCCCCCccCHHHHHHHHHHhC
Confidence 999999999999999999998654
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.34 E-value=3.9e-13 Score=115.79 Aligned_cols=92 Identities=18% Similarity=0.278 Sum_probs=78.2
Q ss_pred CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHH
Q 040003 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLED 456 (489)
Q Consensus 379 ~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~ 456 (489)
+++.++..++..+|.+++ |.+|..+ ....++++.+|+.||+|++|+|+.+||+.+|..+| ++++++++
T Consensus 21 ~~~~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~ 90 (150)
T 2jjz_A 21 RQERRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKK 90 (150)
T ss_dssp HHHHHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 457889999999887664 4444322 23456788999999999999999999999999998 67999999
Q ss_pred HHHHhcCCCCCceeHHHHHHHHHh
Q 040003 457 IIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 457 ~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+++.+|.|++|.|+|+||+.+|..
T Consensus 91 l~~~~D~d~dg~I~~~eF~~~~~~ 114 (150)
T 2jjz_A 91 MISEVTGGVSDTISYRDFVNMMLG 114 (150)
T ss_dssp HHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred HHHHHCCCCCCcEeHHHHHHHHHH
Confidence 999999999999999999999975
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-12 Score=106.45 Aligned_cols=106 Identities=19% Similarity=0.325 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
+..+..++.+|+.+|.| +|+|+..||+.+|+. ++...++.++.++++.+|.|+||.|+|+||+.+|..+...-
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~- 88 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIAC- 88 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHH-
Confidence 44678899999999998 899999999999977 78888899999999999999999999999999987654221
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDND 466 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~d 466 (489)
.+.|....+..+.+.. .+..+.++|+++|.|||
T Consensus 89 ----he~f~~~~k~~~~~~~-------------~d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 89 ----NDYFVVHMKQENLYFQ-------------GDSTVHEILSKLSLEGD 121 (121)
T ss_dssp ----HHHHTTSCC----------------------CCHHHHHHHCCC---
T ss_pred ----HHHHHHHHHHhccCCC-------------CchHHHHHHHHhcccCC
Confidence 2345444444333332 23446677777777765
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.7e-12 Score=120.89 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=96.0
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCC-CeeEEEEEEEeCCeEEEEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP-NVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~~~~~~~~~~~lv~ 208 (489)
|.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+|+.|..|. .+.++++++...+..|+||
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp CEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 55544444666799999853 56778999987542 1245778999999996552 2667899888888899999
Q ss_pred eecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---------------------------------------
Q 040003 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--------------------------------------- 249 (489)
Q Consensus 209 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--------------------------------------- 249 (489)
||++|.+|. . .... ...++.++...|..||+..
T Consensus 95 e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 95 GEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp ECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred EecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 999998884 1 1111 1245556666666666543
Q ss_pred -------------------CeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 250 -------------------VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 250 -------------------iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
++|+|++|.|||+ +.+..++|+|||.|...
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMV---ENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEE---ETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEE---ECCcEEEEEcchhcccC
Confidence 9999999999999 33445679999998654
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-12 Score=103.11 Aligned_cols=63 Identities=22% Similarity=0.326 Sum_probs=59.9
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.++++++|+.||+|++|+|+.+||+.+++.+|++++++.++++.+|.|+||+|+|+||+.+|.
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999884
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-12 Score=104.17 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=60.4
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.++++++|+.||+|++|+|+.+|++.+|+.+|++++++.+|++.+|.|+||+|+|+||+.+|..
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999999999999999999853
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.4e-12 Score=116.78 Aligned_cols=114 Identities=22% Similarity=0.376 Sum_probs=96.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh------------h
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN------------K 413 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~------------~ 413 (489)
..+..+|..+|.|++|.|+.+||..++..+.....++++..+|+.+|.|++|.|+++||..++.... .
T Consensus 102 ~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~ 181 (229)
T 3dd4_A 102 TYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE 181 (229)
T ss_dssp HHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcch
Confidence 3467899999999999999999999998877666778899999999999999999999998886541 1
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcC
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQ 463 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~ 463 (489)
...++.+..+|+.+|.|+||.|+.+||..++.. ...+.++++.+|.
T Consensus 182 ~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~----~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 182 DAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK----DENIMRSMQLFEN 227 (229)
T ss_dssp --CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT----CHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh----CHHHHHHHHhccc
Confidence 223467889999999999999999999999874 5667788887774
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.30 E-value=5.1e-12 Score=114.57 Aligned_cols=103 Identities=19% Similarity=0.176 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHccCCC-CCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHH
Q 040003 379 LMDSEIDGLMQAGDID-NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLE 455 (489)
Q Consensus 379 ~~~~~i~~l~~~~D~d-~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~ 455 (489)
.+..++..+|..+|.+ ++|.|+++||..++.........+.+..+|+.+|.|++|.|+.+||..++..++ .+.+++.
T Consensus 19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~ 98 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98 (204)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHH
Confidence 4567889999999999 899999999999887654445567788999999999999999999999998776 5678899
Q ss_pred HHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 456 DIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 456 ~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+|+.+|.|++|.|+++||..++...
T Consensus 99 ~~F~~~D~d~~G~I~~~E~~~~l~~~ 124 (204)
T 1jba_A 99 WTFKIYDKDRNGCIDRQELLDIVESI 124 (204)
T ss_dssp HHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999998754
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.4e-12 Score=101.27 Aligned_cols=64 Identities=19% Similarity=0.473 Sum_probs=57.1
Q ss_pred HHHHHhhccccc-ccCC-CcccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGS-GYITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~-G~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...++.+|+.|| .|++ |+|+.+||+.+|+. +| ++++++++||+.+|.|+||+|+|+||+.+|..
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 467889999997 7886 89999999999985 54 47999999999999999999999999999864
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=103.92 Aligned_cols=102 Identities=16% Similarity=0.190 Sum_probs=89.1
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---CCCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---GLDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g~~~~~~~~~~ 458 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++... ......+..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 85 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF 85 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 467889999999999999999999988765544556778899999999999999999999998752 24678899999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 86 ~~~D~d~~G~i~~~el~~~l~~~g~ 110 (142)
T 2bl0_C 86 RTFDPEGTGYIPKAALQDALLNLGD 110 (142)
T ss_dssp HHTCCSSCSCEEHHHHHHHHHHSSS
T ss_pred HHHCCCCCCcCcHHHHHHHHHHcCC
Confidence 9999999999999999999987653
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.28 E-value=7e-12 Score=100.52 Aligned_cols=63 Identities=22% Similarity=0.289 Sum_probs=59.2
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+++++|+.||+ ++|+|+.+|++.+|+.+|++++++.+|++.+|.|+||.|+|+||+.+|..
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~ 76 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 76 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 4567899999999 99999999999999999999999999999999999999999999998853
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=5.5e-12 Score=98.77 Aligned_cols=64 Identities=19% Similarity=0.454 Sum_probs=57.1
Q ss_pred HHHHHhhccccc-ccCC-CcccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGS-GYITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~-G~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...++.+|+.|| +|++ |+|+.+||+.+++. +| .++++++++|+.+|.|+||+|+|+||+.+|..
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 467889999998 6885 89999999999985 55 36899999999999999999999999999875
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.28 E-value=4.6e-12 Score=102.56 Aligned_cols=65 Identities=20% Similarity=0.506 Sum_probs=58.5
Q ss_pred hHHHHHhhccccc-ccCCC-cccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFD-KDGSG-YITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.++.+|+.|| +|++| +|+.+||+.+|+. +| ++++++++||+.+|.|+||.|+|+||+.+|..
T Consensus 20 ~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 20 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 3567889999999 89997 9999999999986 54 57889999999999999999999999998864
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.28 E-value=8.1e-12 Score=134.18 Aligned_cols=123 Identities=22% Similarity=0.223 Sum_probs=107.6
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.++.+|..+|.|++|.|+.+||..++..+ .++..+|+.+|.|++|.|+.+||..++........++.+..+|+.
T Consensus 576 ~~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~ 649 (714)
T 3bow_A 576 TCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVAR 649 (714)
T ss_dssp HHHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 45677889999999999999999998775 679999999999999999999999988765444556788899999
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+| |++|.|+.+||..++.. .+.+.++|+.+|.|++|.|+++|+..++..
T Consensus 650 ~D-d~dG~Isf~EF~~~l~~----~~~l~~~F~~~D~d~dG~Is~~el~~l~~~ 698 (714)
T 3bow_A 650 FA-DDELIIDFDNFVRCLVR----LEILFKIFKQLDPENTGTIQLDLISWLSFS 698 (714)
T ss_dssp HS-CTTCEECHHHHHHHHHH----HHHHHHHHSSSCSSCCSEEEEEHHHHHHHH
T ss_pred hC-CCCCeEcHHHHHHHHHH----HHHHHHHHHHhCCCCCCcEEHHHHHHHHHH
Confidence 99 99999999999999876 368889999999999999999988776653
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=94.88 Aligned_cols=84 Identities=24% Similarity=0.372 Sum_probs=71.5
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
..+++++..+++.+|..+|.|++|+|+.+||..+|+.+| ..+..++..++..+|.|++|.|+|+||+..+..... ..
T Consensus 3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~--~~ 79 (86)
T 2opo_A 3 AEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG--LV 79 (86)
T ss_dssp ---CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT--TH
T ss_pred ccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc--HH
Confidence 467888999999999999999999999999999999999 999999999999999999999999999998865432 23
Q ss_pred HHHHhhc
Q 040003 418 DHMYAAF 424 (489)
Q Consensus 418 ~~l~~~F 424 (489)
+.+.++|
T Consensus 80 ~~~~~aF 86 (86)
T 2opo_A 80 KDVSKIF 86 (86)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 4455555
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=6.3e-12 Score=118.41 Aligned_cols=100 Identities=23% Similarity=0.368 Sum_probs=89.0
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh------------hh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN------------KI 414 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~------------~~ 414 (489)
.+..+|..+|.|++|.|+.+||..++..++......++..+|+.+|.|++|.|+++||..++.... ..
T Consensus 130 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~ 209 (256)
T 2jul_A 130 YAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILRED 209 (256)
T ss_dssp HHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCC
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchh
Confidence 467789999999999999999999999988778889999999999999999999999999886542 11
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
..++.+..+|+.+|.|+||.|+.+||..++..
T Consensus 210 ~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 241 (256)
T 2jul_A 210 APLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241 (256)
T ss_dssp CHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 25678899999999999999999999999876
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.2e-11 Score=110.69 Aligned_cols=102 Identities=24% Similarity=0.326 Sum_probs=88.0
Q ss_pred CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-----------hhhhhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 378 NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-----------NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 378 ~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-----------~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
.....++..+|..+|.|++|.|+++||..++... ......+.+..+|+.+|.|++|.|+.+||..++..
T Consensus 36 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~ 115 (191)
T 3khe_A 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115 (191)
T ss_dssp TTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 3345678999999999999999999999988755 33445677889999999999999999999998743
Q ss_pred c--CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 447 F--GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 447 ~--g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
. ....+++..+|+.+|.|++|.|+++||..++.
T Consensus 116 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 116 KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred hcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 3 25688999999999999999999999999987
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.3e-11 Score=126.11 Aligned_cols=177 Identities=20% Similarity=0.212 Sum_probs=121.3
Q ss_pred hhHHHHHHHhcccccCCCCCCCCCC-CC--CCC-cchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH--HHHHh
Q 040003 302 QRQSVLQTRLVRNLNEPGSLWPDKV-AV--PPI-GDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK--GLQRV 375 (489)
Q Consensus 302 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~--~l~~l 375 (489)
+.+.++.+++.|..+|......... .+ ... ........++.+-.+.++ .++..|+..|++.+|+.. +++..
T Consensus 232 slG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~---~~L~~dp~~R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 232 SCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRCTAEEALNSRWIKKY 308 (504)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHH---HHcCCChhHCCCHHHHhcCHhhhhc
Confidence 4467888888888877654221100 00 000 000011233444333333 567788888888888642 22221
Q ss_pred CC------------------------------------CC-CH---HHHHHHHHccCCCCCcceehHHHHHHHHHhhh--
Q 040003 376 GA------------------------------------NL-MD---SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK-- 413 (489)
Q Consensus 376 g~------------------------------------~~-~~---~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~-- 413 (489)
.. .+ ++ .++.++|+.+|.|++|.|+++||..++.....
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~ 388 (504)
T 3q5i_A 309 ANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFK 388 (504)
T ss_dssp CCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC
T ss_pred hhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcc
Confidence 10 01 22 35678999999999999999999988765422
Q ss_pred ------hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 414 ------IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 414 ------~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
...++.+..+|+.+|.|++|.|+.+||..++.... .+++++..+|+.+|.|+||.|+.+||..+|...
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~ 464 (504)
T 3q5i_A 389 NELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT 464 (504)
T ss_dssp --CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCS
T ss_pred cccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhC
Confidence 23467889999999999999999999999885432 578899999999999999999999999998753
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.2e-12 Score=106.00 Aligned_cols=65 Identities=22% Similarity=0.266 Sum_probs=60.5
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..++++++|+.||+|++|+|+.+||+.+|+.+|++++++.+|++.+|.|+||+|+|+||+.+|..
T Consensus 20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~ 84 (110)
T 1iq3_A 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999998853
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=6e-12 Score=98.37 Aligned_cols=65 Identities=22% Similarity=0.469 Sum_probs=61.3
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.++.+|+.||.|++|+|+.+||+.+|..+|+++.+++.+++.+|.|+||.|+|+||+.++.+
T Consensus 25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 25 ELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999875
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-11 Score=110.19 Aligned_cols=101 Identities=13% Similarity=0.160 Sum_probs=82.0
Q ss_pred HHHHHHHHcc-CCCCCcceehHHHHHHHHHhh----hhhhHHHHH-----------hhcccccccCCCcccHHHHHHHHH
Q 040003 382 SEIDGLMQAG-DIDNSGTMDYGEFIAAMLHLN----KIQREDHMY-----------AAFSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 382 ~~i~~l~~~~-D~d~~g~I~f~eF~~~~~~~~----~~~~~~~l~-----------~~F~~~D~d~~G~I~~~El~~~l~ 445 (489)
.++..+|..+ |.|++|.|+++||..++..+. .......+. .+|+.+|.|++|.|+.+||..++.
T Consensus 8 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 87 (185)
T 2sas_A 8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE 87 (185)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence 5678899999 999999999999988876544 222233333 449999999999999999999886
Q ss_pred HcC-----------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 446 QFG-----------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 446 ~~g-----------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
... .....+..+|+.+|.|+||.|+++||..++...+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g 135 (185)
T 2sas_A 88 KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ 135 (185)
T ss_dssp HHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC
T ss_pred HHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC
Confidence 541 1347789999999999999999999999997654
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.27 E-value=8.5e-12 Score=98.15 Aligned_cols=68 Identities=41% Similarity=0.774 Sum_probs=62.4
Q ss_pred hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 413 KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 413 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
....+++++.+|+.||.|++|+|+.+||+.+|+.+| +++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 344577899999999999999999999999999988 68999999999999999999999999999864
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-12 Score=92.34 Aligned_cols=62 Identities=23% Similarity=0.501 Sum_probs=58.0
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+++.+|+.+|.|++|+|+.+||+.++..+| ++++++..+++.+|.|++|.|+|+||+.++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 367899999999999999999999999988 67999999999999999999999999999874
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.9e-11 Score=95.64 Aligned_cols=85 Identities=29% Similarity=0.576 Sum_probs=73.2
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh---hhH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI---QRE 417 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~---~~~ 417 (489)
+.+....++.+|..+|.|++|+|+.+||+.+|..+|..++..++..++..+|.|++|.|+|+||+.++...... ...
T Consensus 4 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~ 83 (92)
T 2kn2_A 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGW 83 (92)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCchH
Confidence 44677889999999999999999999999999999999999999999999999999999999999988654332 234
Q ss_pred HHHHhhcc
Q 040003 418 DHMYAAFS 425 (489)
Q Consensus 418 ~~l~~~F~ 425 (489)
++++.+|+
T Consensus 84 ~~l~~aF~ 91 (92)
T 2kn2_A 84 SRLRRKFS 91 (92)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 56667764
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.9e-12 Score=104.08 Aligned_cols=63 Identities=24% Similarity=0.582 Sum_probs=57.0
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
-+.++.+|+.||.| +|+|+.+||+.+|+. +| .+++++++||+.+|.|+||+|+|+||+.+|..
T Consensus 14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~ 83 (121)
T 4drw_A 14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 83 (121)
T ss_dssp HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 36788999999988 899999999999976 44 67899999999999999999999999999865
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=99.26 E-value=8.7e-12 Score=104.35 Aligned_cols=64 Identities=23% Similarity=0.227 Sum_probs=60.3
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..++++++|+.|| |++|+|+.+|++.+|..+|++++++.+|++.+|.|+||+|+|+||+.+|..
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~l 112 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHL 112 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3567889999999 999999999999999999999999999999999999999999999999853
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.1e-12 Score=93.55 Aligned_cols=65 Identities=43% Similarity=0.754 Sum_probs=60.2
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.++.++.+|+.+|.|++|+|+.+||+.++..+| +++.++..+++.+|.|++|.|+|+||+.+|..
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 456788999999999999999999999999988 68999999999999999999999999998853
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-11 Score=105.28 Aligned_cols=102 Identities=23% Similarity=0.325 Sum_probs=86.5
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
.++..+|..+|.|++|.|+++||..++..+........+..+|+.+|.|++|.|+.+||..++...- -...++..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 85 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHH
Confidence 4678899999999999999999999887655445567788999999999999999999998875431 1246788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 86 ~~~D~d~~G~I~~~el~~~l~~~g~ 110 (143)
T 2obh_A 86 KLFDDDETGKISFKNLKRVAKELGE 110 (143)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHTTC
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 9999999999999999999987653
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=100.64 Aligned_cols=64 Identities=30% Similarity=0.344 Sum_probs=59.6
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
..++++.+|+.||+|++|+|+.+||+.++...+++++++.++++.+|.|+||+|+|+||+.+|.
T Consensus 12 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 12 SRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp HHHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 3457889999999999999999999999997779999999999999999999999999999885
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.25 E-value=6.5e-12 Score=113.66 Aligned_cols=115 Identities=16% Similarity=0.227 Sum_probs=93.9
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-------hhhhhHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-------NKIQRED 418 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-------~~~~~~~ 418 (489)
..+..+|..+|.|++|.|+.+||..++...........+..+|+.+|.|++|.|+++||..++... .....++
T Consensus 73 ~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~ 152 (204)
T 3e3r_A 73 AEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDE 152 (204)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHH
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHH
Confidence 346778899999999999999999887655444455678999999999999999999999887532 2234466
Q ss_pred HHHhhcccccc-cCCCcccHHHHHHHHHHcC---CCHHHHHHHHHH
Q 040003 419 HMYAAFSYFDK-DGSGYITPDELQTACQQFG---LDDTQLEDIIRE 460 (489)
Q Consensus 419 ~l~~~F~~~D~-d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~ 460 (489)
.+..+|+.+|. |++|.|+.+||..++..++ .++++++.+++.
T Consensus 153 ~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~~d~~f~~~~~~ 198 (204)
T 3e3r_A 153 VLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDEEFVAMMTS 198 (204)
T ss_dssp HHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCCChHHHHHHHHH
Confidence 78899999998 9999999999999998876 357777777654
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-11 Score=98.97 Aligned_cols=83 Identities=18% Similarity=0.376 Sum_probs=70.4
Q ss_pred ceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHH
Q 040003 398 TMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFV 475 (489)
Q Consensus 398 ~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~ 475 (489)
.++++++...+.... ....+.++.+|+.||.|++|+|+.+||+.+|..+| +++.++++++..+|.|++|.|+|+||+
T Consensus 5 ~~~~~~~~~~l~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~ 83 (105)
T 1wlz_A 5 ATADRDILARLHKAV-TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83 (105)
T ss_dssp TTCCHHHHHHHHHHH-HHTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred chhHHHHHHHHHHHH-HchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 466778777665432 23467889999999999999999999999999988 689999999999999999999999999
Q ss_pred HHHHhC
Q 040003 476 AMMQDS 481 (489)
Q Consensus 476 ~~~~~~ 481 (489)
.+|...
T Consensus 84 ~~~~~~ 89 (105)
T 1wlz_A 84 SRFSSE 89 (105)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 999743
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-11 Score=96.52 Aligned_cols=65 Identities=42% Similarity=0.672 Sum_probs=60.2
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
....++.+|+.||.|++|+|+.+||+.+|..+| +++.++..++..+|.|++|.|+|+||+.++..
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 356788999999999999999999999999998 67999999999999999999999999999864
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-11 Score=93.38 Aligned_cols=65 Identities=25% Similarity=0.602 Sum_probs=59.6
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.++.+|+.||.|++|+|+.+||+.+++.+| +++.++..++..+|.|++|.|+|+||+.+|..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 346788999999999999999999999999988 57889999999999999999999999999864
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.1e-11 Score=126.14 Aligned_cols=99 Identities=26% Similarity=0.377 Sum_probs=84.3
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhh--------hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK--------IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDD 451 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~--------~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~ 451 (489)
.++.++|+.+|.|++|.|+++||..++..... ...++.+..+|+.+|.|++|.|+.+||..++...+ .++
T Consensus 346 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~ 425 (494)
T 3lij_A 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSK 425 (494)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCH
T ss_pred HHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccH
Confidence 35778999999999999999999988765421 23467788999999999999999999999875432 578
Q ss_pred HHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 452 TQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 452 ~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+++..+|+.+|.|+||.|+++||..+|..
T Consensus 426 ~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 454 (494)
T 3lij_A 426 DKLESAFQKFDQDGNGKISVDELASVFGL 454 (494)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHC-C
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 89999999999999999999999998864
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-11 Score=97.20 Aligned_cols=64 Identities=22% Similarity=0.488 Sum_probs=57.9
Q ss_pred HHHHHhhccccc-ccCCC-cccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGSG-YITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++.+|+.|| +|++| +|+.+||+.+|+. +| +++.+++++|+.+|.|+||.|+|+||+.+|..
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467889999997 89998 9999999999986 45 58999999999999999999999999999864
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-11 Score=103.57 Aligned_cols=102 Identities=22% Similarity=0.258 Sum_probs=87.6
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... .....+..+|
T Consensus 11 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F 90 (147)
T 4ds7_A 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF 90 (147)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 3567789999999999999999999887655555677888999999999999999999999986542 2356788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..++...+.
T Consensus 91 ~~~D~d~~G~i~~~e~~~~l~~~~~ 115 (147)
T 4ds7_A 91 KVFDKNGDGLISAAELKHVLTSIGE 115 (147)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHTTC
T ss_pred HHhCCCCCCeECHHHHHHHHHHcCC
Confidence 9999999999999999999987653
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.4e-11 Score=120.35 Aligned_cols=142 Identities=24% Similarity=0.370 Sum_probs=102.6
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEee--cccCCCHHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEEeC---CeEEE
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIA--KRKLTTEEDVEDVRREIRIMHHLAG-HPNVIQIVGAYEDA---VAVHV 206 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~--~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~---~~~~l 206 (489)
.+.|+.|.++.||++... +..+++|+.. .... ......+.+|+.+|+.|.. +..+++++.++.+. +..|+
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 467899999999998753 4578888764 2211 1123567899999999943 45688999988776 45899
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS--------------------------------------- 247 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~--------------------------------------- 247 (489)
||||++|..+.+.. ...++......++.++..+|..||+
T Consensus 119 vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999998774321 1246777888889999999999997
Q ss_pred -------------------CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 248 -------------------LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 248 -------------------~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..+||+|+++.|||+..++ ...+.|+||+.|..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECcccccc
Confidence 3589999999999994321 12369999998864
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.4e-11 Score=94.96 Aligned_cols=65 Identities=43% Similarity=0.799 Sum_probs=60.6
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+.++.+|+.||.|++|+|+.+||+.+|..+| ++++++..++..+|.|++|.|+|+||+.+|..
T Consensus 7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 73 (92)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 456788999999999999999999999999998 68999999999999999999999999998864
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=106.60 Aligned_cols=102 Identities=28% Similarity=0.328 Sum_probs=87.3
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... ...+.+..+|
T Consensus 28 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 107 (169)
T 3qrx_A 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAF 107 (169)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 4567889999999999999999998887665545677888999999999999999999999886532 2356788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..++...+.
T Consensus 108 ~~~D~d~~G~i~~~el~~~l~~~g~ 132 (169)
T 3qrx_A 108 RLFDDDNSGTITIKDLRRVAKELGE 132 (169)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHTTC
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcCC
Confidence 9999999999999999999987653
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.21 E-value=3.5e-11 Score=105.90 Aligned_cols=99 Identities=22% Similarity=0.314 Sum_probs=85.9
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCC--------HHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLM--------DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDH 419 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~--------~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~ 419 (489)
+..+|..+|.|++|.|+.+||..++........ ...+..+|+.+|.|++|.|+++||..++.... ..++.
T Consensus 60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~ 137 (176)
T 1nya_A 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAE 137 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHH
Confidence 448999999999999999999999988755444 35688999999999999999999998887654 56778
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG 448 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g 448 (489)
+..+|+.+|.|++|.|+.+||..++..+.
T Consensus 138 ~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 138 AAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 89999999999999999999999987654
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.21 E-value=2.6e-11 Score=103.84 Aligned_cols=102 Identities=23% Similarity=0.276 Sum_probs=86.1
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... ...+++..+|
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 89 (148)
T 1exr_A 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAF 89 (148)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHH
Confidence 3467789999999999999999998887655445567788999999999999999999998875431 2356788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 90 ~~~D~d~~G~I~~~el~~~l~~~g~ 114 (148)
T 1exr_A 90 KVFDRDGNGLISAAELRHVMTNLGE 114 (148)
T ss_dssp HHHSTTCSSCBCHHHHHHHHHHTTC
T ss_pred HHhCCCCCCcCCHHHHHHHHHHhCC
Confidence 9999999999999999999987653
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.9e-11 Score=104.52 Aligned_cols=101 Identities=16% Similarity=0.210 Sum_probs=87.0
Q ss_pred HHHHHHHHccC-CCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC-------CCHHH
Q 040003 382 SEIDGLMQAGD-IDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-------LDDTQ 453 (489)
Q Consensus 382 ~~i~~l~~~~D-~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-------~~~~~ 453 (489)
.++..+|..+| .|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... .....
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 92 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQE 92 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSST
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHH
Confidence 35678899999 99999999999999887655445667788999999999999999999999987653 33567
Q ss_pred HHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 454 ~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+..+|+.+|.|++|.|+.+||..+|...+
T Consensus 93 ~~~~F~~~D~d~~G~I~~~el~~~l~~~g 121 (158)
T 2jnf_A 93 LREAFRLYDKEGNGYISTDVMREILAELD 121 (158)
T ss_dssp HHHHHHHHCSSSSSSEEHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHhC
Confidence 89999999999999999999999998655
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.6e-11 Score=96.71 Aligned_cols=64 Identities=20% Similarity=0.529 Sum_probs=54.5
Q ss_pred HHHHHhhccccc-ccC-CCcccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDG-SGYITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~-~G~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++.+|+.|| +|+ +|+|+.+||+.+|+. +| +++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 467889999999 798 589999999999986 44 56789999999999999999999999999864
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3e-11 Score=103.53 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=88.0
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
.+++++|..+|.|++|.|+++||..++........+..+..+|..+|.+++|.|+..|+..++.... ...+++..+|
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF 89 (148)
T 2lmt_A 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAF 89 (148)
T ss_dssp HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 3466789999999999999999998887665555677788999999999999999999998886543 4578899999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 90 ~~~D~d~~G~I~~~El~~~l~~~g~ 114 (148)
T 2lmt_A 90 KIFDRDGDGFISPAELRFVMINLGE 114 (148)
T ss_dssp HHHHSSCSSEECHHHHHHHHHHHTC
T ss_pred HHHCCCCcCcCcHHHHHHHHHHcCc
Confidence 9999999999999999999987654
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.2e-12 Score=92.57 Aligned_cols=61 Identities=25% Similarity=0.424 Sum_probs=56.2
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+|+.+|.|++|+|+.+||+.+++.+| ++++++..+++.+|.|+||.|+|+||+.+|...
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~ 65 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 4789999999999999999999999887 578899999999999999999999999998753
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8e-12 Score=95.23 Aligned_cols=68 Identities=35% Similarity=0.643 Sum_probs=60.7
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
..++.+. +|+.||.|++|+|+.+||+.++..+| +++.++..+++.+|.|++|.|+|+||+.+|.....
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 76 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN 76 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence 3467789 99999999999999999999999888 67999999999999999999999999999986543
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.2e-11 Score=96.56 Aligned_cols=65 Identities=17% Similarity=0.294 Sum_probs=56.7
Q ss_pred HHHHHhhcccccccC---CCcccHHHHHHHHHHcC---CC----HHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDG---SGYITPDELQTACQQFG---LD----DTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~---~G~I~~~El~~~l~~~g---~~----~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+.++.+|+.||.|+ +|+|+.+||+.+|+..+ ++ ++++++||+.+|.|+||+|+|+||+.+|...
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 467889999999964 79999999999998643 33 6789999999999999999999999999753
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.5e-11 Score=93.63 Aligned_cols=67 Identities=27% Similarity=0.510 Sum_probs=61.9
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC-CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG-LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
..++++.+|+.+|.|++|+|+.+||+.++..+| +++.+++.+++.+|.|+||.|+|+||+.++....
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 76 (86)
T 2opo_A 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 76 (86)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc
Confidence 356788999999999999999999999999988 7799999999999999999999999999998654
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.20 E-value=5.8e-11 Score=92.44 Aligned_cols=75 Identities=37% Similarity=0.581 Sum_probs=70.3
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
+...++.++...++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++..+|.|++|.|+|+||+..+..
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 445688999999999999999999999999999999999999999999999999999999999999999988854
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.5e-11 Score=108.57 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=82.0
Q ss_pred HHHHHHHHcc-CCCCCcceehHHHHHHHHHh----hhhhhHHHHHhhc-----------ccccccCCCcccHHHHHHHHH
Q 040003 382 SEIDGLMQAG-DIDNSGTMDYGEFIAAMLHL----NKIQREDHMYAAF-----------SYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 382 ~~i~~l~~~~-D~d~~g~I~f~eF~~~~~~~----~~~~~~~~l~~~F-----------~~~D~d~~G~I~~~El~~~l~ 445 (489)
.++..+|..+ |.|++|.|+++||..++... ........+..+| +.+|.|++|.|+.+||..++.
T Consensus 12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 91 (191)
T 2ccm_A 12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91 (191)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHH
Confidence 4578899999 99999999999999888655 2222334455555 899999999999999999886
Q ss_pred HcC-----------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 446 QFG-----------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 446 ~~g-----------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
... .....+..+|+.+|.|+||.|+++||..++...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g 139 (191)
T 2ccm_A 92 ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG 139 (191)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT
T ss_pred HHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 642 1246788999999999999999999999997665
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.20 E-value=2.2e-11 Score=95.28 Aligned_cols=63 Identities=17% Similarity=0.415 Sum_probs=57.4
Q ss_pred HHHHHhhcccccccCCC---cccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSG---YITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G---~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++.+|+.|| |++| +|+.+||+.+|+. +| +++.+++++++.+|.|+||+|+|+||+.+|..
T Consensus 8 ~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 8 VVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 456889999999 7777 9999999999998 77 67999999999999999999999999999875
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-11 Score=97.51 Aligned_cols=64 Identities=17% Similarity=0.431 Sum_probs=57.9
Q ss_pred HHHHHhhccccc-ccCCC-cccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGSG-YITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++.+|+.|| +|++| +|+.+||+.+|+. +| +++.+++++++.+|.|+||.|+|+||+.+|..
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 457889999999 89998 9999999999976 34 68899999999999999999999999999864
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.20 E-value=2.5e-11 Score=105.22 Aligned_cols=101 Identities=24% Similarity=0.351 Sum_probs=86.2
Q ss_pred HHHHHHHHccCCCC-CcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC------CCHHHH
Q 040003 382 SEIDGLMQAGDIDN-SGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------LDDTQL 454 (489)
Q Consensus 382 ~~i~~l~~~~D~d~-~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------~~~~~~ 454 (489)
.++..+|..+|.|+ +|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... .....+
T Consensus 18 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 97 (161)
T 1dtl_A 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEEL 97 (161)
T ss_dssp HHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHH
Confidence 35678899999999 99999999999887655445567788999999999999999999999986642 346678
Q ss_pred HHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 455 EDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 455 ~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
..+|+.+|.|++|.|+.+||..++...+
T Consensus 98 ~~~F~~~D~d~~G~i~~~El~~~l~~~g 125 (161)
T 1dtl_A 98 SDLFRMFDKNADGYIDLEELKIMLQATG 125 (161)
T ss_dssp HHHHHHHCTTCSSEEEHHHHGGGGTTC-
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 9999999999999999999999987654
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-11 Score=92.67 Aligned_cols=64 Identities=33% Similarity=0.640 Sum_probs=59.4
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC-CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG-LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
++++.+|+.+|.|++|+|+.+||+.+++.+| ++++++..+++.+|.|+||.|+|+||+.++...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 4678899999999999999999999998887 789999999999999999999999999999765
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.20 E-value=4.5e-11 Score=103.51 Aligned_cols=102 Identities=19% Similarity=0.270 Sum_probs=87.7
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc--C-CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF--G-LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~--g-~~~~~~~~~~ 458 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++... . -....+..+|
T Consensus 23 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 102 (161)
T 3fwb_A 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF 102 (161)
T ss_dssp HHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 356778999999999999999999988766545567788999999999999999999999988653 1 3367899999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..++...+.
T Consensus 103 ~~~D~d~~G~i~~~el~~~l~~~~~ 127 (161)
T 3fwb_A 103 QLFDDDHTGKISIKNLRRVAKELGE 127 (161)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHTTC
T ss_pred HHHcCCCCCeEeHHHHHHHHHHhCC
Confidence 9999999999999999999987654
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.20 E-value=6.2e-11 Score=102.22 Aligned_cols=101 Identities=15% Similarity=0.191 Sum_probs=87.4
Q ss_pred HHHHHHHHccCC--CCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc----CCCHHHHH
Q 040003 382 SEIDGLMQAGDI--DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF----GLDDTQLE 455 (489)
Q Consensus 382 ~~i~~l~~~~D~--d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g~~~~~~~ 455 (489)
.++..+|..+|. |++|.|+++||..++..+........+..+ +.+|.|++|.|+.+||..++... ......+.
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~ 87 (156)
T 1wdc_C 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYM 87 (156)
T ss_dssp HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHH
Confidence 346788999999 999999999999988765544456678888 99999999999999999998776 34578899
Q ss_pred HHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 456 DIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 456 ~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
.+|+.+|.|++|.|+.+||..+|...+.
T Consensus 88 ~~F~~~D~d~~G~I~~~el~~~l~~~g~ 115 (156)
T 1wdc_C 88 EAFKTFDREGQGFISGAELRHVLTALGE 115 (156)
T ss_dssp HHHHTTCSSSSSEEEHHHHHHHHHHSSS
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHcCC
Confidence 9999999999999999999999987654
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.19 E-value=5.1e-11 Score=106.83 Aligned_cols=100 Identities=20% Similarity=0.215 Sum_probs=85.5
Q ss_pred HHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc-CCCHHHHHHHHH
Q 040003 381 DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF-GLDDTQLEDIIR 459 (489)
Q Consensus 381 ~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~~~~~~ 459 (489)
..++..+|..+|.|++|.|+.+||..++........ ..+..+|+.+|.|++|.|+.+||..++... ....+.+..+|+
T Consensus 51 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~ 129 (191)
T 3k21_A 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFR 129 (191)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHH
Confidence 356788999999999999999999998876543333 567789999999999999999999887433 256788999999
Q ss_pred HhcCCCCCceeHHHHHHHHHhC
Q 040003 460 EVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 460 ~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+|.|++|.|+.+||..++...
T Consensus 130 ~~D~d~~G~Is~~El~~~l~~~ 151 (191)
T 3k21_A 130 VFDVDNDGEITTAELAHILYNG 151 (191)
T ss_dssp HHSTTCSSCBCHHHHHHHHHHS
T ss_pred HhCCCCCCcCCHHHHHHHHHhc
Confidence 9999999999999999999864
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.4e-11 Score=106.46 Aligned_cols=102 Identities=24% Similarity=0.296 Sum_probs=86.5
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... .....+..+|
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F 90 (179)
T 2f2o_A 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF 90 (179)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHH
Confidence 5678899999999999999999999887655445567788999999999999999999999886542 2356788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..++...+.
T Consensus 91 ~~~D~d~~G~I~~~E~~~~l~~~g~ 115 (179)
T 2f2o_A 91 RVFDKDGNGYISAAELRHVMTNLGE 115 (179)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHC--
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 9999999999999999999987653
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.19 E-value=4.7e-11 Score=103.47 Aligned_cols=101 Identities=24% Similarity=0.343 Sum_probs=86.9
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC------CCHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------LDDTQLE 455 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------~~~~~~~ 455 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... .....+.
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 99 (162)
T 1top_A 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELA 99 (162)
T ss_dssp HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHH
Confidence 4577899999999999999999999887655445567888999999999999999999999886532 1456788
Q ss_pred HHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 456 DIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 456 ~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.+|+.+|.|++|.|+.+||..++...+
T Consensus 100 ~~F~~~D~d~~G~I~~~e~~~~l~~~g 126 (162)
T 1top_A 100 NCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 999999999999999999999998765
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=99.19 E-value=9.3e-12 Score=133.28 Aligned_cols=121 Identities=14% Similarity=0.209 Sum_probs=102.0
Q ss_pred hhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHcc-------CCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 354 MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG-------DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 354 ~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~-------D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.+|.|++|+|+.+|+..+|+..+. ...++..+++.+ |.+++|.|+|+||+..+..+. ...+++++|+.
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~~~~~--~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~~ 237 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLSKDKD--DRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFKE 237 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHCSCHH--HHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHHH
T ss_pred hccCCCCCCCCHHHHHHHHHhcCC--hHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHH
Confidence 479999999999999998865431 135688888877 677889999999999887654 24578999999
Q ss_pred ccccCCCcccHHHHHHHHHHcC------------CCHHHHHHHHHHhcC--C----CCCceeHHHHHHHHHh
Q 040003 427 FDKDGSGYITPDELQTACQQFG------------LDDTQLEDIIREVDQ--D----NDGRIDYSEFVAMMQD 480 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g------------~~~~~~~~~~~~~d~--d----~dG~I~~~eF~~~~~~ 480 (489)
||.|++|.|+. ||+.+|...+ ++++++.+||++++. | ++|.|++++|..+|..
T Consensus 238 y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S 308 (816)
T 3qr0_A 238 LSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC 308 (816)
T ss_dssp HTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred HccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence 99999999999 9999999875 357899999999887 5 7899999999999973
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.7e-11 Score=89.84 Aligned_cols=71 Identities=32% Similarity=0.551 Sum_probs=66.4
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
++.++...++.+|..+|.|++|+|+.+||..+|+.+|..++..++..++..+|.|++|.|+|+||+.++..
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999988753
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.9e-11 Score=95.65 Aligned_cols=64 Identities=20% Similarity=0.570 Sum_probs=58.5
Q ss_pred HHHHHhhccccc-ccCCC-cccHHHHHHHHHH---cC-CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGSG-YITPDELQTACQQ---FG-LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~---~g-~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...++.+|+.|| +|++| +|+.+||+.+|+. +| +++.+++++++.+|.|+||.|+|+||+.+|..
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 457889999999 99999 9999999999986 44 77889999999999999999999999999864
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.18 E-value=3.9e-11 Score=110.70 Aligned_cols=117 Identities=16% Similarity=0.152 Sum_probs=89.4
Q ss_pred CccHHHHHHHHHHhCCCCC-HHHHHHHHHccCCC--CCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHH
Q 040003 362 YITLEELKKGLQRVGANLM-DSEIDGLMQAGDID--NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438 (489)
Q Consensus 362 ~i~~~el~~~l~~lg~~~~-~~~i~~l~~~~D~d--~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~ 438 (489)
.++.+++.......+.... -.++..+|..+|.| ++|.|+++||..++.. .....+..+..+|+.+|.|++|.|+.+
T Consensus 27 ~l~~~~~~~l~~~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~ 105 (226)
T 2zfd_A 27 SGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFE 105 (226)
T ss_dssp -----CTHHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHH
T ss_pred cCCHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHH
Confidence 4555677766665543321 23466789999999 9999999999988754 222233456679999999999999999
Q ss_pred HHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 439 ELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 439 El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
||..++..++ ...+++..+|+.+|.|++|.|+++||..++.
T Consensus 106 Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~ 149 (226)
T 2zfd_A 106 EFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149 (226)
T ss_dssp HHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 9999998775 2367899999999999999999999999985
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.2e-11 Score=106.29 Aligned_cols=97 Identities=22% Similarity=0.407 Sum_probs=83.2
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC-CCHHHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-LDDTQLEDIIRE 460 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~~~~~~~~~~~~ 460 (489)
.++..+|..+|.|++|.|+++||..++..... ....+..+|+.+|.|++|.|+.+||..++.... ..++++..+|+.
T Consensus 39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~ 116 (180)
T 3mse_B 39 KYINELFYKLDTNHNGSLSHREIYTVLASVGI--KKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNK 116 (180)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 56788999999999999999999998875432 246788999999999999999999999886543 445789999999
Q ss_pred hcCCCCCceeHHHHHHHHHh
Q 040003 461 VDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 461 ~d~d~dG~I~~~eF~~~~~~ 480 (489)
+|.|++|.|+.+||..++..
T Consensus 117 ~D~d~~G~I~~~El~~~l~~ 136 (180)
T 3mse_B 117 IDKDEDGYISKSDIVSLVHD 136 (180)
T ss_dssp HCTTCSSCBCHHHHHHHTTT
T ss_pred HCCCCCCCCCHHHHHHHHcC
Confidence 99999999999999999974
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.17 E-value=7.2e-11 Score=95.38 Aligned_cols=101 Identities=16% Similarity=0.228 Sum_probs=82.8
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh---hhhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL---NKIQ 415 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~---~~~~ 415 (489)
.++.++ +.++|..+|. +|.|+.+||..++.. ......++..+|+.+|.|++|.|+++||..++... ....
T Consensus 5 ~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~ 77 (109)
T 5pal_A 5 VLKADD---INKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp TSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred cCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence 345554 4556677776 899999999988754 23467889999999999999999999999888765 4445
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
.++.+..+|+.+|.|++|.|+.+||..+++.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 5778899999999999999999999998865
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.17 E-value=7.5e-11 Score=92.25 Aligned_cols=70 Identities=24% Similarity=0.348 Sum_probs=64.4
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
++.++..+++++|+.+|.|++|+|+.+||+.+|+.+| .++.++..+++.+|.|++|.|+|+||+.+|...
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 5678899999999999999999999999999999987 568899999999999999999999999988643
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-11 Score=109.50 Aligned_cols=100 Identities=19% Similarity=0.250 Sum_probs=75.9
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc--CCCHHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF--GLDDTQLEDIIR 459 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~--g~~~~~~~~~~~ 459 (489)
.++..+|..+|.|++|.|+++||..++........+..+..+|+.+|.|++|.|+.+||..++... ...++.+..+|+
T Consensus 57 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~ 136 (197)
T 3pm8_A 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFK 136 (197)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 346788999999999999999999988766544556788899999999999999999998876332 246788999999
Q ss_pred HhcCCCCCceeHHHHHHHHHhC
Q 040003 460 EVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 460 ~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+|.|++|.|+.+||..+|...
T Consensus 137 ~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 137 FFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp HHCTTCSSEECHHHHHHHHC--
T ss_pred HHCCCCCCCCCHHHHHHHHHhc
Confidence 9999999999999999999765
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.17 E-value=5.4e-11 Score=116.47 Aligned_cols=101 Identities=23% Similarity=0.284 Sum_probs=86.4
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHHH
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIR 459 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~ 459 (489)
+++++|+.+|.|++|.|+.+||..++..+.....++++..+|+.+|.|++|.|+.+||..++...- -.++++.++|+
T Consensus 303 ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk 382 (440)
T 3u0k_A 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFR 382 (440)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 467789999999999999999999887765555677899999999999999999999998886532 24578999999
Q ss_pred HhcCCCCCceeHHHHHHHHHhCCC
Q 040003 460 EVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 460 ~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
.+|.|++|.|+.+||..+|...+.
T Consensus 383 ~fDkDgdG~IS~eELr~vL~~lGe 406 (440)
T 3u0k_A 383 VFDKDGNGYISAAELRHVMTNLGE 406 (440)
T ss_dssp HHCTTCSSEECHHHHHHHHHHHTC
T ss_pred HHCCCCcCcCCHHHHHHHHHHhCC
Confidence 999999999999999999987553
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.16 E-value=5.8e-11 Score=94.04 Aligned_cols=70 Identities=19% Similarity=0.296 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMID-TDNS-GYITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D-~d~~-g~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
...+..++++|+.|| .|++ |+|+.+||+.+|+. +|...++.+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 346788999999998 8887 99999999999986 4677889999999999999999999999999988653
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=9.9e-11 Score=95.32 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHhhhcC-CCCC-CccHHHHHHHHH-HhCCC-----CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh
Q 040003 342 EEEIAGLKEMFKMIDT-DNSG-YITLEELKKGLQ-RVGAN-----LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK 413 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~-d~~g-~i~~~el~~~l~-~lg~~-----~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~ 413 (489)
.+++..++.+|+.+|. |++| +|+.+||+.+|+ .+|.. .++.++..+|+.+|.|++|.|+|+||+.++....
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~- 86 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT- 86 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH-
Confidence 3457789999999995 9999 999999999999 77742 5788999999999999999999999999886542
Q ss_pred hhhHHHHHhhcccccccCCCcc
Q 040003 414 IQREDHMYAAFSYFDKDGSGYI 435 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I 435 (489)
......|...| +++|.=
T Consensus 87 ----~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 ----WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp ----HHHHC-------------
T ss_pred ----HHHHHHHhhCC-CCCccc
Confidence 23457888888 888853
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-11 Score=123.00 Aligned_cols=128 Identities=24% Similarity=0.297 Sum_probs=101.7
Q ss_pred hhhcCCCCCCccHHHHHHHHHHhCCCCCH---HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccc
Q 040003 353 KMIDTDNSGYITLEELKKGLQRVGANLMD---SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDK 429 (489)
Q Consensus 353 ~~~D~d~~g~i~~~el~~~l~~lg~~~~~---~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~ 429 (489)
+.+|.+.+|.+...++..... ...++ .++.++|+.+|.|++|.|+.+||..++..+......+.+..+|+.+|.
T Consensus 283 k~iD~de~g~i~~~e~~~~~~---~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~ 359 (450)
T 3sg6_A 283 KGIDFKEDGNILGHKLEYNTR---DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 359 (450)
T ss_dssp EEESCCTTSTTTTTCBCCC------CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCT
T ss_pred ccCCccccccchhhhhhhhhc---ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcc
Confidence 447788888887766533211 12222 467889999999999999999999988765555567788899999999
Q ss_pred cCCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 430 DGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 430 d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
|++|.|+.+||..++...- ...+++..+|+.+|.|++|.|+.+||..+|...+.
T Consensus 360 DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~ 416 (450)
T 3sg6_A 360 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 416 (450)
T ss_dssp TSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC
T ss_pred CCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCC
Confidence 9999999999999986542 35678999999999999999999999999987654
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.16 E-value=2.3e-11 Score=97.50 Aligned_cols=64 Identities=16% Similarity=0.425 Sum_probs=56.6
Q ss_pred HHHHHhhccccc-ccCC-CcccHHHHHHHHHH-cC--CC-HHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGS-GYITPDELQTACQQ-FG--LD-DTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~-G~I~~~El~~~l~~-~g--~~-~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++.+|+.|| +|++ |+|+.+||+.+|+. +| ++ ++++++||+.+|.|+||.|+|+||+.+|..
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 467889999999 7997 79999999999976 66 33 478999999999999999999999999864
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=6.1e-11 Score=104.88 Aligned_cols=102 Identities=21% Similarity=0.265 Sum_probs=88.1
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCC---CHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGL---DDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~---~~~~~~~~~ 458 (489)
.+++++|..+|.|++|.|+++||..++..+.....+..+..+|+.+|.|++|.|+..|+..++..... +++++..+|
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF 90 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAF 90 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHH
Confidence 35678899999999999999999998876655566788899999999999999999999988755432 356799999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 91 ~~fD~d~~G~I~~~el~~~l~~~g~ 115 (176)
T 2lhi_A 91 KVFDKNGDGLISAAELKHVLTSIGE 115 (176)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHTTTC
T ss_pred HHhCCCCCCcCcHHHHHHHHHHcCc
Confidence 9999999999999999999987654
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.16 E-value=4.5e-11 Score=103.98 Aligned_cols=98 Identities=20% Similarity=0.271 Sum_probs=82.6
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCC-------HHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-------DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHM 420 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~-------~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l 420 (489)
+..+|..+|.|++|.|+.+||..++........ ...+..+|+.+|.|++|.|+++||..++.... ..++.+
T Consensus 57 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~ 134 (166)
T 3akb_A 57 WQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLA 134 (166)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHH
Confidence 357899999999999999999988877643221 23488899999999999999999998886654 567788
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHc
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQF 447 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~ 447 (489)
..+|+.+|.|++|.|+.+||..++..+
T Consensus 135 ~~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 135 RQAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 899999999999999999999998653
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=99.72 Aligned_cols=99 Identities=10% Similarity=0.145 Sum_probs=83.3
Q ss_pred HHHHHHhhh-cCCCCCCccHHHHHHHHHHh------CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHH
Q 040003 347 GLKEMFKMI-DTDNSGYITLEELKKGLQRV------GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDH 419 (489)
Q Consensus 347 ~l~~~F~~~-D~d~~g~i~~~el~~~l~~l------g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~ 419 (489)
.+..+|..+ |.|++|.|+..||..++... ........+..+|+.+|.|++|.|+.+||..++........++.
T Consensus 41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 120 (148)
T 1m45_A 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE 120 (148)
T ss_dssp HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH
Confidence 466778999 99999999999999998776 44456688999999999999999999999998876554456778
Q ss_pred HHhhcccccccCCCcccHHHHHHHHH
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~ 445 (489)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 121 ~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 121 VDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp HHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 89999999999999999999998875
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.15 E-value=4.6e-11 Score=96.58 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=81.4
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh---hhhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL---NKIQ 415 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~---~~~~ 415 (489)
.++.++ +.++|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||..++... ....
T Consensus 6 ~~~~~e---i~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~ 78 (109)
T 3fs7_A 6 ILSAKD---IESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL 78 (109)
T ss_dssp TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred cCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence 345444 455667777 7999999999988754 33567889999999999999999999998887655 3344
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~ 445 (489)
.++.+..+|+.+|.|++|.|+.+||..+++
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 577889999999999999999999998874
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-11 Score=91.67 Aligned_cols=65 Identities=34% Similarity=0.690 Sum_probs=60.0
Q ss_pred hHHHHHhhcccc-cccCC-CcccHHHHHHHHHHcC--C--CHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYF-DKDGS-GYITPDELQTACQQFG--L--DDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~-D~d~~-G~I~~~El~~~l~~~g--~--~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..++++.+|+.| |.|++ |+|+.+||+.+|..+| + +++++..+++.+|.|++|.|+|+||+.++..
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 356788999999 99999 9999999999999887 6 8889999999999999999999999999875
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.15 E-value=2.2e-11 Score=108.98 Aligned_cols=101 Identities=24% Similarity=0.308 Sum_probs=86.4
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIR 459 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~ 459 (489)
.++..+|..+|.|++|.|+++||..++..+.....+..+..+|+.+|.|++|.|+.+||..++..+. ...+.+..+|+
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~ 89 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFS 89 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 3578899999999999999999998886654444567788999999999999999999999886554 23457899999
Q ss_pred HhcCCCCCceeHHHHHHHHHhCC
Q 040003 460 EVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 460 ~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.+|.|++|.|+.+||..+|...+
T Consensus 90 ~~D~d~dG~Is~~El~~~l~~~g 112 (188)
T 1s6i_A 90 YFDKDGSGYITLDEIQQACKDFG 112 (188)
T ss_dssp HTTTTCSSEEEHHHHHHTTTTTT
T ss_pred HHCCCCCCcCcHHHHHHHHHHcC
Confidence 99999999999999999987655
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=5.8e-11 Score=96.70 Aligned_cols=64 Identities=17% Similarity=0.452 Sum_probs=57.9
Q ss_pred HHHHHhhccccc-ccCCC-cccHHHHHHHHH-HcC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFD-KDGSG-YITPDELQTACQ-QFG-------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~-~~g-------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++.+|+.|| +|++| +|+.+||+.+|+ .+| +++.+++++|+.+|.|+||.|+|+||+.+|..
T Consensus 11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 84 (113)
T 1xk4_C 11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 84 (113)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 456889999999 49999 999999999998 676 36889999999999999999999999999864
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=99.57 Aligned_cols=103 Identities=17% Similarity=0.350 Sum_probs=85.8
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHH-hhhhhhHHHHHhhc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH-LNKIQREDHMYAAF 424 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~-~~~~~~~~~l~~~F 424 (489)
.+..+|..+|.|++|.|+.+||..++...... .....+..+|+.+|.|++|.|+.+||..++.. .......+.+..+|
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 118 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 46778999999999999999999999877544 45578899999999999999999999998866 33334455555556
Q ss_pred cc----ccccCCCcccHHHHHHHHHHcCC
Q 040003 425 SY----FDKDGSGYITPDELQTACQQFGL 449 (489)
Q Consensus 425 ~~----~D~d~~G~I~~~El~~~l~~~g~ 449 (489)
+. +|.|++|.|+.+||..++..+++
T Consensus 119 ~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 147 (155)
T 3ll8_B 119 DKTIINADKDGDGRISFEEFCAVVGGLDI 147 (155)
T ss_dssp HHHHHHHCTTSSSSBCHHHHHHHHGGGCG
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHhccCc
Confidence 55 99999999999999999988764
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.14 E-value=4.8e-11 Score=102.26 Aligned_cols=102 Identities=14% Similarity=0.141 Sum_probs=85.8
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccccccc--CCCcccHHHHHHHHHHcCC-----CHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKD--GSGYITPDELQTACQQFGL-----DDTQL 454 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~El~~~l~~~g~-----~~~~~ 454 (489)
.++..+|..+|.|++|.|+++||..++..+........+..+|+.+|.| ++|.|+.+||..++..... ....+
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l 89 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY 89 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHH
Confidence 3577899999999999999999998887655445577889999999999 9999999999999877541 24567
Q ss_pred HHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 455 EDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 455 ~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
..+|+.+|.|++|.|+.+||..++...+.
T Consensus 90 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~ 118 (151)
T 1w7j_B 90 LEGFRVFDKEGNGKVMGAELRHVLTTLGE 118 (151)
T ss_dssp HHHHHTTCTTSSSEEEHHHHHHHHHHSSS
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHcCC
Confidence 88999999999999999999999987754
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.8e-11 Score=104.66 Aligned_cols=100 Identities=21% Similarity=0.296 Sum_probs=84.0
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHH
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIRE 460 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~ 460 (489)
++..+|..+|.|++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++.... ...+.+..+|+.
T Consensus 28 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 107 (166)
T 2aao_A 28 GLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTY 107 (166)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHH
Confidence 467789999999999999999998886654444567788999999999999999999998875433 245678999999
Q ss_pred hcCCCCCceeHHHHHHHHHhCC
Q 040003 461 VDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 461 ~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+|.|++|.|+.+||..++...+
T Consensus 108 ~D~d~~G~i~~~e~~~~l~~~~ 129 (166)
T 2aao_A 108 FDKDGSGYITPDELQQACEEFG 129 (166)
T ss_dssp HCTTCSSSBCHHHHHHHTCC--
T ss_pred hCCCCCCcCcHHHHHHHHHHcC
Confidence 9999999999999999987654
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=9.1e-11 Score=94.59 Aligned_cols=66 Identities=23% Similarity=0.424 Sum_probs=60.9
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+.++.+|+.||.|++|+|+.+||+.++..+| +++.++..++..+|.|+||.|+|+||+.++...
T Consensus 30 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 30 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp HHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 345788999999999999999999999999998 689999999999999999999999999999753
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=89.79 Aligned_cols=72 Identities=15% Similarity=0.200 Sum_probs=67.0
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHH---HHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE---IDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~---i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
..++.+++.+++.+|..+|.|++|+|+..||..+|+.+|..++..+ +..++..+|.|++|.|+| ||+.++..
T Consensus 6 ~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 3567778899999999999999999999999999999999999999 999999999999999999 99988754
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-10 Score=98.05 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=86.8
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccc---cccCCCcccHHHHHHHHHHcC-----CCHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYF---DKDGSGYITPDELQTACQQFG-----LDDTQ 453 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~---D~d~~G~I~~~El~~~l~~~g-----~~~~~ 453 (489)
.++..+|..+|.|++|.|+++||..++...........+..+|+.+ |.|+ |.|+.+||..++.... .....
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~ 86 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFED 86 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHH
Confidence 4577889999999999999999998887655445567788899999 9999 9999999999987751 34678
Q ss_pred HHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 454 ~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+..+|+.+|.|++|.|+.+||..+|...+.
T Consensus 87 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~ 116 (149)
T 2mys_C 87 FVEGLRVFDKEGNGTVMGAELRHVLATLGE 116 (149)
T ss_pred HHHHHHHhCCCCCceEcHHHHHHHHHHhCC
Confidence 899999999999999999999999987653
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.13 E-value=7e-11 Score=101.20 Aligned_cols=65 Identities=26% Similarity=0.481 Sum_probs=60.4
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..++++.+|+.||.|++|+|+.+||+.+|..+| +++.++.++++.+|.|++|.|+|+||+.+|..
T Consensus 46 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 112 (147)
T 1wy9_A 46 KLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG 112 (147)
T ss_dssp HHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 356788999999999999999999999999998 68999999999999999999999999999964
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.13 E-value=8.3e-11 Score=92.58 Aligned_cols=70 Identities=21% Similarity=0.347 Sum_probs=63.8
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
++.++..+++++|+.+|.|++|+|+.+||+.+|+.+| .++.++..+++.+|.|++|.|+|+||+.+|...
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 4567889999999999999999999999999999986 568899999999999999999999999988643
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.6e-11 Score=103.65 Aligned_cols=100 Identities=11% Similarity=-0.018 Sum_probs=60.9
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhC-CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhhHHHHHhhcc
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVG-ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQREDHMYAAFS 425 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg-~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~~~~l~~~F~ 425 (489)
.+++|..+|.|++|.|+.+||..++.... ......++..+|+.+|.|++|.|+.+||..++.... .....+.+..+|+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 35678889999999999999988776532 222356788899999999999999999988876555 2456677888999
Q ss_pred cccccCCCcccHHHHHHHHHHc
Q 040003 426 YFDKDGSGYITPDELQTACQQF 447 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~ 447 (489)
.+|.|++|.|+.+||..++...
T Consensus 85 ~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 85 EGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHCSSCSSSBCHHHHHHHHHHH
T ss_pred HhCCCCCCCCcHHHHHHHHHHh
Confidence 9999999999999999988764
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.9e-10 Score=97.67 Aligned_cols=102 Identities=18% Similarity=0.203 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC----CCHHHH
Q 040003 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG----LDDTQL 454 (489)
Q Consensus 379 ~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~ 454 (489)
++++++..+|..+|.|++|.|+++||..++...........+..+|+. |++|.|+.+||..++.... .....+
T Consensus 2 ls~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 78 (145)
T 2bl0_B 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEM 78 (145)
T ss_dssp CCHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHH
T ss_pred CCHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHH
Confidence 456779999999999999999999999888765444456667777766 8999999999999986542 246789
Q ss_pred HHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 455 EDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 455 ~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
..+|+.+|.|++|.|+.+||..+|...+.
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~g~ 107 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLNLGD 107 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHHSSS
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHcCC
Confidence 99999999999999999999999987653
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.12 E-value=6.2e-11 Score=91.37 Aligned_cols=63 Identities=13% Similarity=0.233 Sum_probs=58.5
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHH---HHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ---LEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~---~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+++.+|+.||.|++|+|+.+||+.+|+.+| +++.+ +..++..+|.|++|.|+| ||+.++..
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 45688999999999999999999999999998 67889 999999999999999999 99999864
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-10 Score=93.38 Aligned_cols=72 Identities=18% Similarity=0.284 Sum_probs=64.4
Q ss_pred ccHHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 340 LSEEEIAGLKEMFKMID-TDNSG-YITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
...+.+..++++|+.|| .|++| +|+.+||+.+|+. +|..+++.+++.+++.+|.|+||.|+|+||+.++...
T Consensus 16 ~~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 16 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 44567889999999999 89997 9999999999987 7777888999999999999999999999999988643
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.7e-10 Score=93.09 Aligned_cols=96 Identities=15% Similarity=0.173 Sum_probs=79.6
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh---hhhhhHHHHHhh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL---NKIQREDHMYAA 423 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~---~~~~~~~~l~~~ 423 (489)
++..+|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+.+||..++... .....++.+..+
T Consensus 10 e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (109)
T 1rwy_A 10 DIKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTL 85 (109)
T ss_dssp HHHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHH
T ss_pred HHHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 4556677777 88999999999887432 3457789999999999999999999999888765 333456778899
Q ss_pred cccccccCCCcccHHHHHHHHHH
Q 040003 424 FSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 424 F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
|+.+|.|++|.|+.+||..++..
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 86 MAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHCCCCCCcCCHHHHHHHHHc
Confidence 99999999999999999988764
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-10 Score=86.67 Aligned_cols=65 Identities=31% Similarity=0.529 Sum_probs=60.6
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.+++.+|..+|.|++|+|+.+||..+|+.+| ..+..++..++..+|.|++|.|+|+||+..+...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 3578899999999999999999999999999 8999999999999999999999999999988654
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=99.10 E-value=4e-11 Score=94.03 Aligned_cols=64 Identities=14% Similarity=0.340 Sum_probs=58.1
Q ss_pred HHHHHhhcccccc-cCCC-cccHHHHHHHH-HHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDK-DGSG-YITPDELQTAC-QQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~-d~~G-~I~~~El~~~l-~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++.+|+.||. |++| +|+.+||+.++ +.+| ++..++..+++.+|.|+||.|+|+||+.++..
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 4578899999999 9999 99999999999 7788 55678899999999999999999999999864
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.10 E-value=2.1e-10 Score=92.63 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=78.3
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh---hhhhhHHHHHhh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL---NKIQREDHMYAA 423 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~---~~~~~~~~l~~~ 423 (489)
++..+|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+++||..++... .....++.+..+
T Consensus 11 e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 86 (109)
T 1bu3_A 11 DVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAF 86 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHH
Confidence 3455666677 88999999999887432 2357789999999999999999999999888765 333557788899
Q ss_pred cccccccCCCcccHHHHHHHHH
Q 040003 424 FSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 424 F~~~D~d~~G~I~~~El~~~l~ 445 (489)
|+.+|.|++|.|+.+||..+++
T Consensus 87 ~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 87 LKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999988764
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=2e-10 Score=89.63 Aligned_cols=72 Identities=24% Similarity=0.404 Sum_probs=66.0
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
...++.++...++.+|+.+|.|++|+|+.+||..+|+.+| .+..++..++..+|.|++|.|+|+||+.++..
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 4567888999999999999999999999999999999998 67899999999999999999999999988753
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.10 E-value=2.8e-11 Score=103.18 Aligned_cols=97 Identities=20% Similarity=0.167 Sum_probs=48.9
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCC----C-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh--------h
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGA----N-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK--------I 414 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~----~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~--------~ 414 (489)
-...|..+|.|++|+|+.+||..++..+.. . ..++++..+|+.+|.|++|.|+++||..++..+.. .
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 346899999999999999999998876522 1 33567889999999999999999999887754311 1
Q ss_pred hhHH----HHHhhcccccccCCCcccHHHHHHHH
Q 040003 415 QRED----HMYAAFSYFDKDGSGYITPDELQTAC 444 (489)
Q Consensus 415 ~~~~----~l~~~F~~~D~d~~G~I~~~El~~~l 444 (489)
...+ -+..+|+.+|.|+||.|+.+||..++
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 1222 23677899999999999999998765
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.5e-10 Score=91.39 Aligned_cols=70 Identities=23% Similarity=0.391 Sum_probs=64.3
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.++.++..+++++|+.+|. ++|+|+.+|++.+|+.+| +++.++.++++.+|.|++|.|+|+||+.+|..+
T Consensus 8 ~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 8 AVKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp SSCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3577889999999999999 999999999999999987 678999999999999999999999999988654
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=99.09 E-value=7.2e-11 Score=92.44 Aligned_cols=66 Identities=24% Similarity=0.522 Sum_probs=59.9
Q ss_pred hHHHHHhhccccc-ccCCC-cccHHHHHHHHHH-----cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFD-KDGSG-YITPDELQTACQQ-----FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+.++.+|+.|| +|++| +|+.+||+.++.. +| +++++++++++.+|.|+||.|+|+||+.+|...
T Consensus 7 ~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3467889999999 79999 9999999999987 66 789999999999999999999999999998753
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-10 Score=102.89 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=79.0
Q ss_pred HHHHHHHHccCCCCCcceehHHHH-----HHHHHhhhhhhHH-----HHHhhcccccccCCCcccHHHHHHHHHHcC---
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFI-----AAMLHLNKIQRED-----HMYAAFSYFDKDGSGYITPDELQTACQQFG--- 448 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~-----~~~~~~~~~~~~~-----~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--- 448 (489)
.++..+|..+|.|++|.|+++||. .++.......... .+..+|+.+|.|++|.|+.+||..++....
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~ 95 (191)
T 1uhk_A 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDE 95 (191)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcch
Confidence 457789999999999999999998 4444332222222 578899999999999999999998876531
Q ss_pred ------CCHHHHH----HHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 449 ------LDDTQLE----DIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 449 ------~~~~~~~----~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
...+.+. .+|+.+|.|++|.|+.+||..++...+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~ 140 (191)
T 1uhk_A 96 LEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGI 140 (191)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTS
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCC
Confidence 1112233 8999999999999999999999976553
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-10 Score=92.83 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=78.5
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh---hhhhhHHHHHhh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL---NKIQREDHMYAA 423 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~---~~~~~~~~l~~~ 423 (489)
++..+|..+| ++|.|+.+||..++... .....++..+|+.+|.|++|.|+.+||..++... .....++.+..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF 85 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 4555667777 78999999999887432 3457789999999999999999999999888655 333456788899
Q ss_pred cccccccCCCcccHHHHHHHHH
Q 040003 424 FSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 424 F~~~D~d~~G~I~~~El~~~l~ 445 (489)
|+.+|.|++|.|+.+||..++.
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 86 LADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999998774
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.3e-10 Score=90.33 Aligned_cols=70 Identities=17% Similarity=0.260 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHH-hC----CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMID-TDNS-GYITLEELKKGLQR-VG----ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D-~d~~-g~i~~~el~~~l~~-lg----~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
...+..++++|+.|| .|++ |+|+.+||+.+|+. +| ...++.+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 456788999999998 6775 89999999999986 54 45689999999999999999999999999988654
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3.3e-11 Score=92.22 Aligned_cols=64 Identities=31% Similarity=0.577 Sum_probs=57.8
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC----CCHHHHHH----HHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG----LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~~~----~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+++..+|+.||.|++|+|+.+||+.++..+| ++++++.. +++.+|.|+||.|+|+||+..+..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~ 77 (83)
T 1yx7_A 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE 77 (83)
T ss_dssp CTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence 45688999999999999999999999999887 57778888 999999999999999999987763
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=3e-10 Score=92.02 Aligned_cols=71 Identities=23% Similarity=0.352 Sum_probs=64.7
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.++.++..+++++|+.+|.|++|+|+.+||+.+|+ +..++..++..+++.+|.|++|.|+|+||+.++...
T Consensus 7 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp SSCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 36778889999999999999999999999999998 567889999999999999999999999999988643
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.7e-10 Score=104.70 Aligned_cols=101 Identities=15% Similarity=0.126 Sum_probs=83.1
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhh--hhhHHHHHhhc-------ccccccCCCcccHHHHHHHHH-------
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK--IQREDHMYAAF-------SYFDKDGSGYITPDELQTACQ------- 445 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~--~~~~~~l~~~F-------~~~D~d~~G~I~~~El~~~l~------- 445 (489)
.++..+|..+|.|++|.|+++||..++..+.. ....+.+..+| +.+|.|++|.|+.+||..++.
T Consensus 36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~ 115 (208)
T 2hpk_A 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAER 115 (208)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhh
Confidence 35788999999999999999999988865543 34456666777 999999999999999999886
Q ss_pred --HcCC---CHHH-HHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 446 --QFGL---DDTQ-LEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 446 --~~g~---~~~~-~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.+.- ...+ +..+|+.+|.|++|.|+.+||..++...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g 158 (208)
T 2hpk_A 116 ERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD 158 (208)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred hhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 3321 2334 78899999999999999999999998765
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.08 E-value=4.5e-10 Score=88.96 Aligned_cols=70 Identities=19% Similarity=0.295 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMID-TDNSG-YITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D-~d~~g-~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.+++..++++|+.|| .|++| +|+.+||+.+|+. +|...++.++..+++.+|.|++|.|+|+||+.++...
T Consensus 6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 346788999999997 88987 9999999999987 6777899999999999999999999999999888653
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=2.4e-10 Score=83.25 Aligned_cols=63 Identities=19% Similarity=0.418 Sum_probs=59.6
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
+++.+|+.+|.|++|+|+.+||..++..+|...+..++..+++.+|.|++|.|+|+||+..+.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999998775
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-10 Score=92.73 Aligned_cols=72 Identities=18% Similarity=0.296 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHH-hCCCC-CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh
Q 040003 342 EEEIAGLKEMFKMID-TDNS-GYITLEELKKGLQR-VGANL-MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK 413 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D-~d~~-g~i~~~el~~~l~~-lg~~~-~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~ 413 (489)
.+++..++++|+.|| .|++ |+|+.+||+.+|+. +|... ++.++..+++.+|.|++|.|+|+||+.++.....
T Consensus 18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~~ 93 (106)
T 2h2k_A 18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAK 93 (106)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHH
Confidence 446788999999999 7986 79999999999986 66443 3478999999999999999999999998865443
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3.4e-10 Score=96.86 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=83.0
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCC-----HHHHHHHHHccCCCCCcceehHHHHHHHHH-hhhhhhHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDIDNSGTMDYGEFIAAMLH-LNKIQREDHM 420 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~-----~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~-~~~~~~~~~l 420 (489)
.+..+|..+|.+++|.|+.+||..++........ ...+..+|+.+|.|++|.|+.+||..++.. ......++.+
T Consensus 48 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~ 127 (153)
T 3ox6_A 48 ELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDI 127 (153)
T ss_dssp HHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHH
T ss_pred HHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHH
Confidence 4566788899999999999999998876543332 567899999999999999999999998876 4444556788
Q ss_pred HhhcccccccCCCcccHHHHHHHHH
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~ 445 (489)
..+|+.+|.|++|.|+.+||..++.
T Consensus 128 ~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 128 EEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred HHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 8999999999999999999988763
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.07 E-value=4.1e-10 Score=87.98 Aligned_cols=69 Identities=22% Similarity=0.379 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhhhcCCCCC---CccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDTDNSG---YITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g---~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
...+..++++|+.+| +++| +|+.+||+.+|+. +|...++.++..+++.+|.|++|.|+|+||+.++..+
T Consensus 5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 346778999999999 7766 9999999999999 8888999999999999999999999999999988654
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.1e-10 Score=88.39 Aligned_cols=66 Identities=33% Similarity=0.691 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
...+++.+|+.+|.|++|+|+.+||+.+|+.+|..+++.+++.+++.+|.|++|.|+|+||+.++.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 456789999999999999999999999999999999999999999999999999999999998774
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 489 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-41 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-41 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 8e-41 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-40 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-40 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-39 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 8e-39 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-38 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-38 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-38 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 7e-38 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 8e-38 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-37 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-37 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-37 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 8e-37 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-35 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-34 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-34 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-34 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-34 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-34 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 1e-33 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 9e-11 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 2e-08 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 3e-33 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 6e-33 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-32 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 2e-32 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-32 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-32 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 5e-32 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 5e-32 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 9e-32 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-31 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 9e-11 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-31 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-31 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-30 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 8e-30 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-29 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-29 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-29 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 4e-29 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 8e-29 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 8e-29 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-28 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-28 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-28 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-28 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-28 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 8e-28 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 8e-28 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-27 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 1e-27 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 2e-07 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-27 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-27 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-27 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 6e-27 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 8e-27 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 6e-04 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 8e-27 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 7e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 0.003 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-26 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 3e-26 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 3e-13 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 0.002 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 7e-26 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 8e-26 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-25 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-15 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-07 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-25 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 2e-25 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 8e-10 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-25 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-17 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 3e-25 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 2e-05 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 4e-25 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 5e-25 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 4e-13 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 5e-25 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 8e-08 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 6e-25 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 7e-25 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 7e-25 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 3e-24 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 2e-07 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 0.002 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 3e-24 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 3e-11 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 6e-04 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 0.002 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 8e-24 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-23 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 1e-23 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 2e-23 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 4e-23 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 2e-12 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 2e-04 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 7e-23 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-23 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-22 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 1e-22 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 3e-14 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 2e-22 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 6e-07 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 2e-22 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 2e-21 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 1e-13 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 2e-21 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 8e-05 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-21 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 5e-21 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 3e-16 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 2e-20 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 9e-14 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 2e-20 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 2e-20 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 1e-04 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 5e-20 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 8e-07 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 6e-20 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 5e-16 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 7e-20 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 3e-15 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 7e-20 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 1e-04 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 8e-04 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 2e-19 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 2e-05 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 1e-18 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 3e-15 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-18 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-18 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 6e-15 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 9e-18 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-17 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 8e-16 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 1e-17 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 1e-14 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 1e-17 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 1e-14 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-17 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-15 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 8e-17 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-15 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-16 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-16 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 2e-14 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 0.004 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 5e-16 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 2e-14 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 6e-16 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 3e-15 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 8e-16 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 8e-16 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 2e-10 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 1e-15 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-08 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 4e-15 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 1e-13 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 2e-14 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 3e-11 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 3e-14 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 2e-04 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 6e-14 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 4e-12 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 1e-13 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 9e-07 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 3e-13 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 6e-07 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 3e-13 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 1e-11 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 6e-13 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 1e-12 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 9e-13 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 2e-09 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 9e-13 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 6e-11 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 1e-12 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 8e-11 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-12 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 6e-08 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 4e-12 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 2e-11 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 0.002 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 7e-12 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 4e-10 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-11 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-06 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-11 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 4e-10 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-10 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-09 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 2e-10 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 2e-10 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 3e-10 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 7e-10 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 7e-09 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 8e-07 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 1e-08 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 9e-08 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 2e-06 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 5e-06 | |
| d2pula1 | 392 | d.144.1.6 (A:5-396) Methylthioribose kinase MtnK { | 8e-05 | |
| d1xk4c1 | 83 | a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa | 4e-04 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 0.002 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 0.003 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 148 bits (374), Expect = 2e-41
Identities = 63/165 (38%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
++ +++++Y LG G F L +K TQK A K IAK+ L E + EI
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIA 59
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
++H + HPN++ + YE ++++M+L +GGELFDRI+++G YTER A+ L ++
Sbjct: 60 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 118
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
V+ H LG++HRDLKPEN L+ + E++ + DFGLS PG
Sbjct: 119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 163
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 147 bits (371), Expect = 2e-41
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT------EEDVEDVRREIRI 181
E Y LG+G C+ K T KE+A K I + +E E +E+ I
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
+ ++GHPN+IQ+ YE +V +L GELFD + ++ +E++ + R ++ V
Sbjct: 63 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 122
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ A H L ++HRDLKPEN L + +K DFG S PG
Sbjct: 123 ICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPG 163
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 8e-41
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ +GR LG+G+FG +L EK ++ A K + K +L +RRE+ I HL HP
Sbjct: 8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHP 66
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
N++++ G + DA V++++E G ++ + + + E++ A + + CHS
Sbjct: 67 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 126
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
V+HRD+KPEN L LK DFG S+ +
Sbjct: 127 VIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSRRTTL 164
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 145 bits (366), Expect = 3e-40
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
+ ++++S R++G G FG + + + A K ++ + E +D+ +E+R +
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71
Query: 185 LAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEA 244
L HPN IQ G Y +VME C G + + E + A +T + +
Sbjct: 72 LR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTF 288
HS ++HRD+K N L E +K DFG + P +F
Sbjct: 131 LHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANSF 171
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 4e-40
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ G+ LG+G F T L E AT +E+A K + KR + E V V RE +M L HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 68
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+++ ++D ++ + GEL I + G + E T IV +E H G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLKPEN L E+ ++ DFG + P
Sbjct: 129 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPE 161
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 144 bits (365), Expect = 1e-39
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 6/171 (3%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI 181
K G++ + Y + +LG G FG CVEKAT + F K I D V+ EI I
Sbjct: 23 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISI 79
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVG 240
M+ L HP +I + A+ED + +++E +GGELFDRI + +E + + R
Sbjct: 80 MNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE 138
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
++ H ++H D+KPEN + ++ + +K IDFGL+ P +V
Sbjct: 139 GLKHMHEHSIVHLDIKPENIM-CETKKASSVKIIDFGLATKLNPDEIVKVT 188
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (356), Expect = 8e-39
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHL 185
L E Y + LG+G+FG CVE +++K + K + + D V++EI I++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA 58
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEA 244
H N++ + ++E + ++ E +G ++F+RI ER+ + ++
Sbjct: 59 -RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
HS + H D++PEN ++ + + +K I+FG + +PG FR+
Sbjct: 118 LHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLL 163
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 141 bits (357), Expect = 1e-38
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRI 181
K ++ + Y + +LG G FG E+AT FA K + E D E VR+EI+
Sbjct: 20 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQT 76
Query: 182 MHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRII-QRGHYTERKAADLTRIIVG 240
M L HP ++ + A+ED + ++ E +GGELF+++ + +E +A + R +
Sbjct: 77 MSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 135
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ H +H DLKPEN + + LK IDFGL+ P
Sbjct: 136 GLCHMHENNYVHLDLKPENIM-FTTKRSNELKLIDFGLTAHLDPK 179
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 141 bits (356), Expect = 2e-38
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--G 187
+S+ R +G+G FG + C + T K +A K + K+++ ++ E ++ ++
Sbjct: 6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
P ++ + A+ + +++L GG+L + Q G ++E I+ +E H+
Sbjct: 66 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 125
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLHF 296
V++RDLKP N L E ++ D GL+ F +
Sbjct: 126 RFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASVGTHGY 171
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 3e-38
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ L + LG+G +G L V + T++ A K + ++ + E++++EI I L H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHE 63
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
NV++ G + ++ +E C+GGELFDRI E A ++ V H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ HRD+KPEN L + LK DFGL+ FR
Sbjct: 124 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 156
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 7e-38
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
G+ K+ Y+ K+GQG GT + ++ AT +E A + + ++ + E + EI +M
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMR 72
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVE 243
+PN++ + +Y + VVME AGG L D ++ E + A + R + +E
Sbjct: 73 EN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 244 ACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
HS V+HRD+K +N L + +K DFG P + R
Sbjct: 131 FLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKR 173
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 8e-38
Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Query: 122 KTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED---VEDVRRE 178
+ N+ + Y G +LG GQF C EK+T ++A K I KR+ + ED+ RE
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 179 IRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRII 238
+ I+ + HPNVI + YE+ V +++EL AGGELFD + ++ TE +A + + I
Sbjct: 64 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAP-LKTIDFGLSMFFRPGLTFRVW 291
+ V HSL + H DLKPEN + +++ P +K IDFGL+ G F+
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (346), Expect = 1e-37
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 121 RKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIR 180
+ N ++ + + +LG G FG + K T A K I + EE++ED EI
Sbjct: 5 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEID 61
Query: 181 IMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIV 239
I+ HPN+++++ A+ + +++E CAGG + +++ TE + + + +
Sbjct: 62 ILASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 120
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+ H ++HRDLK N LF + +K DFG+S + R
Sbjct: 121 DALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQRR 167
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (346), Expect = 2e-37
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 7/159 (4%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ +LG G G F K + A K I + RE++++H P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SP 64
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-L 248
++ GA+ + + ME GG L + + G E+ ++ ++ +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+MHRD+KP N L ++ E +K DFG+S +
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA 160
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 2e-37
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
+ LG G G K TQ++FA K + +D RRE+ + + P++
Sbjct: 16 TSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHI 67
Query: 192 IQIVGAYEDAVA----VHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEAC 245
++IV YE+ A + +VME GGELF RI RG +TER+A+++ + I ++
Sbjct: 68 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 127
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
HS+ + HRD+KPEN L+ +++ A LK DFG +
Sbjct: 128 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 167
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (342), Expect = 8e-37
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ L + LG+G FG FL K T + FA K++ K + ++DVE E R++ HP
Sbjct: 4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+ + ++ + VME GG+L I + +A I+ ++ HS G
Sbjct: 64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+++RDLK +N L ++ +K DFG+ G
Sbjct: 124 IVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 158
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 127 bits (320), Expect = 1e-35
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
+ +L+EE+IA KE F + D DN+G I+ EL ++ +G + ++E++ LM D+D +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 397 GTMDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQ 453
+++ EF+A M L E + AF FDK+G G I+ EL+ G L D +
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
++D++REV D G I+ +F A++
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALLS 145
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (322), Expect = 2e-34
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
++G+G F T + ++ T E A + RKL T+ + + + E ++ L HP
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HP 68
Query: 190 NVIQIVGAYEDAVA----VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
N+++ ++E V + +V EL G L + + + R I+ ++
Sbjct: 69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128
Query: 246 HSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
H+ ++HRDLK +N +K D GL+ R V
Sbjct: 129 HTRTPPIIHRDLKCDNIFI--TGPTGSVKIGDLGLATLKRASFAKAV 173
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 127 bits (321), Expect = 3e-34
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 5/156 (3%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
+L + Y LG LG G L + ++ A K + RRE +
Sbjct: 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63
Query: 185 LAGHPNVIQIVGAYED----AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVG 240
L HP ++ + E ++VME G L D + G T ++A ++
Sbjct: 64 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDF 276
+ H G++HRD+KP N + +
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 158
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 124 bits (311), Expect = 3e-34
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 400 DYGEFIAAMLHLN----KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--Q 453
D+ EF+ M+ K + E+ + F FDK+ G+I +EL + G T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 454 LEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ED++++ D++NDGRID+ EF+ MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 4e-34
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y + +G G +G K+ K K + + TE + + + E+ ++ L HP
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HP 63
Query: 190 NVIQIVGAYEDAV--AVHVVMELCAGGELFDRII----QRGHYTERKAADLTRIIVGVVE 243
N+++ D +++VME C GG+L I +R + E + + ++
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 244 ACHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
CH V+HRDLKP N +Q +K DFGL+ +F
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFA 171
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 128 bits (322), Expect = 4e-34
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + R LG G FG L + + +A K + K + + VE E ++ + HP
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP 64
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+I++ G ++DA + ++M+ GGELF + + + A + +E HS
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 124
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282
+++RDLKPEN L + +K DFG + +
Sbjct: 125 IIYRDLKPENILL---DKNGHIKITDFGFAKYV 154
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 122 bits (306), Expect = 1e-33
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
E L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +G
Sbjct: 1 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 398 TMDYGEFIAAML-HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF--GLDDTQL 454
T+D+ EF++ M + + E+ + AF FD+DG+G I+ EL+ L D ++
Sbjct: 61 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 120
Query: 455 EDIIREVDQDNDGRIDYSEFVAMM 478
+++IRE D D DG I+Y EFV MM
Sbjct: 121 DEMIREADIDGDGHINYEEFVRMM 144
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 57.6 bits (138), Expect = 9e-11
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
L E FK+ D D +G I+ EL+ + +G L D E+D +++ DID G ++Y EF+
Sbjct: 84 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 143
Query: 408 ML 409
M+
Sbjct: 144 MV 145
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 51.0 bits (121), Expect = 2e-08
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 410 HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDG 467
L + Q + AF+ FDKDG G IT EL T + G + +L+D+I EVD D +G
Sbjct: 2 QLTEEQIAE-FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 468 RIDYSEFVAMMQ 479
ID+ EF+++M
Sbjct: 61 TIDFPEFLSLMA 72
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 122 bits (306), Expect = 3e-33
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 4/157 (2%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
AE LSEEEI GLKE+FKMIDTDNSG IT +ELK GL+RVG+ LM+SEI LM A DID S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLED 456
GT+DYGEFIAA +HLNK++RE+++ +AFSYFDKDGSGYIT DE+Q AC+ FGLDD ++D
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD 120
Query: 457 IIREVDQDNDGRIDYSEFVAMMQ----DSGLGKKVFK 489
+I+E+DQDNDG+IDY EF AMM+ + G+G++ +
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMR 157
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 6e-33
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
++G+++G G FGT + + A K + T + ++ + E+ ++ H
Sbjct: 10 ITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR-HV 64
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACHSL 248
N++ +G Y A + +V + C G L+ + I + K D+ R ++ H+
Sbjct: 65 NILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDLK N E+ +K DFGL+
Sbjct: 124 SIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRW 157
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 2e-32
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVED---VRREIRIM 182
L+ Y +G LG G FG+ + + + A K + K +++ ++ + V E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 183 HHL-AGHPNVIQIVGAYEDAVAVHVVMELCAGG-ELFDRIIQRGHYTERKAADLTRIIVG 240
+ +G VI+++ +E + +++E +LFD I +RG E A ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
V CH+ GV+HRD+K EN L LK IDFG +
Sbjct: 122 AVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD 163
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 2e-32
Identities = 41/140 (29%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDY 401
EE+ ++E F + D D +G I ++ELK ++ +G EI ++ D + +G M++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 402 GEFIAAMLHL-NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDII 458
G+F+ M ++ ++ + AF FD D +G I+ L+ ++ G L D +L+++I
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 121
Query: 459 REVDQDNDGRIDYSEFVAMM 478
E D+D DG + EF+ +M
Sbjct: 122 DEADRDGDGEVSEQEFLRIM 141
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 123 bits (308), Expect = 2e-32
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y LGRK+G G FG +L + A +E A K + + E +I + G
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGV 63
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+ I + +VMEL ++ + L ++ +E HS
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
+HRD+KP+NFL ++ + IDFGL+ +R T +
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 165
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 3e-32
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ + LG+G FG L EKAT + +A K + K + +++V E R++ + HP
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHP 65
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+ + A++ + VME GGELF + + +TE +A IV +E HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWL 292
V++RD+K EN + ++ +K DFGL
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTF 165
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 122 bits (306), Expect = 5e-32
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y +GR++G+G FG F ++ A K +R D +R E R LAG
Sbjct: 7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCT 61
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+ + ++ + +V++L + ++ + A + ++ V++ H
Sbjct: 62 GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS 121
Query: 250 VMHRDLKPENFLF--INQQEEAPLKTIDFGLSMFFRPGLT 287
+++RD+KP+NFL N + + +DFG+ F+R +T
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 161
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 5e-32
Identities = 35/191 (18%), Positives = 65/191 (34%), Gaps = 29/191 (15%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMH 183
+E G+ LG G FG K +A + L + E + E+++M
Sbjct: 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT 95
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH------------------ 225
L H N++ ++GA + ++++ E C G+L + + +
Sbjct: 96 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155
Query: 226 -----YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
T + +E +HRDL N L + + + DFGL+
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL-VTHGKVVKI--CDFGLAR 212
Query: 281 FFRPGLTFRVW 291
+ V
Sbjct: 213 DIMSDSNYVVR 223
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 122 bits (306), Expect = 9e-32
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y L RKLG+G++ F + ++ K + + ++REI+I+ +L G P
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP------VKKKKIKREIKILENLRGGP 90
Query: 190 NVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
N+I + +D V+ +V E + T+ I+ ++ CHS
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHS 147
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+G+MHRD+KP N + + E L+ ID+GL+ F+ PG
Sbjct: 148 MGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPG 183
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 116 bits (291), Expect = 1e-31
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61
Query: 393 IDNSGTMDYGEFIAAMLHLNKIQR----EDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D SGT+D+ EF+ M+ K E+ + F FDK+ GYI +EL+ Q G
Sbjct: 62 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121
Query: 449 --LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ + +E+++++ D++NDGRIDY EF+ M+
Sbjct: 122 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 58.0 bits (139), Expect = 9e-11
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 290 VWLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLK 349
+ + L + + + + + G++ D+ V + EE L
Sbjct: 37 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEE--LS 94
Query: 350 EMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
++F+M D + GYI LEELK LQ G + + +I+ LM+ GD +N G +DY EF+ M
Sbjct: 95 DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 153
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 122 bits (306), Expect = 2e-31
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 89 APVPQQQQEQSKKPAHVKRISSAGLQVGSVLGRKTGNLKEMYSLGRKLGQGQFGTTFLCV 148
A ++ EQ + + L+ + T L + + + LG G FG L
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL-DQFDRIKTLGTGSFGRVMLVK 61
Query: 149 EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208
K + +A K + K+K+ + +E E RI+ + P ++++ +++D +++VM
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVM 120
Query: 209 ELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE 268
E AGGE+F + + G ++E A IV E HSL +++RDLKPEN L Q
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-- 178
Query: 269 APLKTIDFGLS 279
++ DFG +
Sbjct: 179 -YIQVTDFGFA 188
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 7e-31
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
+ + ++ +Y + +G G +G V+ T + A K + R +E + RE
Sbjct: 9 VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRE 67
Query: 179 IRIMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
+R++ H+ H NVI ++ + +D ++VM G ++++ E +
Sbjct: 68 LRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQ 124
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWL 292
L ++ + H+ G++HRDLKP N E+ LK +DFGL+ +T V
Sbjct: 125 FLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADSEMTGYVVT 181
Query: 293 RLH 295
R +
Sbjct: 182 RWY 184
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 1e-30
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 9/165 (5%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKE---FACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
L KLG G FG A + A K + L+ E ++D RE+ MH L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL- 68
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEAC 245
H N+I++ G + +V EL G L DR+ + GH+ + + +
Sbjct: 69 DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV 290
S +HRDL N L + +K DFGL V
Sbjct: 128 ESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYV 169
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (290), Expect = 8e-30
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 134 RKLGQGQFGTTFLCVEKATQK--EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
+LG G FG+ V + +K + A K + ++ T + D E++ RE +IMH L +P +
Sbjct: 15 IELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQL-DNPYI 71
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRII-QRGHYTERKAADLTRIIVGVVEACHSLGV 250
++++G + A+ +VME+ GG L ++ +R A+L + ++
Sbjct: 72 VRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 130
Query: 251 MHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
+HRDL N L +N+ K DFGLS ++
Sbjct: 131 VHRDLAARNVLLVNRHY---AKISDFGLSKALGADDSYY 166
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (290), Expect = 1e-29
Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 24/185 (12%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMH 183
+ S G+ LG G FG K A ++A + L + E + E++++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 81
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH------------------ 225
+L H N++ ++GA V+ E C G+L + + ++
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 226 YTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ + + S +HRDL N L + + K DFGL+ +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKND 198
Query: 286 LTFRV 290
+ V
Sbjct: 199 SNYVV 203
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 1e-29
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 13/166 (7%)
Query: 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH 184
++ Y+ +G+G +G + + A K I + + REI+I+
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLR 62
Query: 185 LAGHPNVIQIVGAYEDA-----VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIV 239
H N+I I V++V L G ++++ H + I+
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLM--GADLYKLLKTQHLSNDHICYFLYQIL 119
Query: 240 GVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++ HS V+HRDLKP N L LK DFGL+ P
Sbjct: 120 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPD 162
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 2e-29
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 13/164 (7%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y K+GQG FG F + T ++ A K + E REI+I+ L H
Sbjct: 12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLK-HE 69
Query: 190 NVIQIVGAYEDAVA--------VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
NV+ ++ + +++V + C +T + + ++++
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ H ++HRD+K N L + LK DFGL+ F
Sbjct: 130 LYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLA 170
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 111 bits (277), Expect = 4e-29
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
+E EI + F SG++++EE KK S+ + + + D + GT
Sbjct: 18 FTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGT 75
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---------- 448
+D+ EFI A+ ++ + E + AFS +D DG+GYI+ E+ Q
Sbjct: 76 IDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMP 135
Query: 449 ----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
+ + E I R++D + DG++ EF+ +
Sbjct: 136 EDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD 172
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (284), Expect = 8e-29
Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 19/174 (10%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+G+G FG K ++ +++D D E+ ++ L HP
Sbjct: 12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR----------------GHYTERKAAD 233
N+I ++GA E +++ +E G L D + + + ++
Sbjct: 72 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+ ++ +HRDL N L E K DFGLS +
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVK 182
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 8e-29
Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 12/161 (7%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E L +LG GQFG ++ + A KS+ + + E +M L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQ----GSMSPDAFLAEANLMKQLQ 66
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEA 244
H ++++ ++++ E G L D + T K D+ I +
Sbjct: 67 -HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+HRDL+ N L + K DFGL+
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDN 162
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 2e-28
Identities = 39/164 (23%), Positives = 62/164 (37%), Gaps = 5/164 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
+ Y K+G+G +GT F + T + A K + E REI ++ L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELK- 59
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H N++++ + +V E C G ++ + CHS
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
V+HRDLKP+N L E K +FGL+ F +
Sbjct: 120 RNVLHRDLKPQNLLINRNGEL---KLANFGLARAFGIPVRCYSA 160
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 112 bits (281), Expect = 2e-28
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 6/160 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAK-RKLTTEEDVEDVRREIRIMHHLA 186
+ + +G G+FG K K +I + TE+ D E IM
Sbjct: 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEAC 245
HPNVI + G + V ++ E G L + Q G +T + + R I ++
Sbjct: 86 -HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 144
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ +HRDL N L + K DFGLS F
Sbjct: 145 ADMNYVHRDLAARNILVNSNLV---CKVSDFGLSRFLEDD 181
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 2e-28
Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 7/165 (4%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAK-RKLTTEEDVEDVRREIRIMHHL 185
+E LGR +G+GQFG + + + +I + T++ E +E M
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEA 244
HP++++++G + V ++MELC GEL + R + +
Sbjct: 66 -DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
S +HRD+ N L +K DFGLS + ++
Sbjct: 124 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYK 165
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (278), Expect = 2e-28
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 134 RKLGQGQFGTTFLCV--EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNV 191
++LG G FGT K K A K + K + +++ E +M L +P +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQL-DNPYI 70
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
++++G E + +VME+ G L + Q H ++ +L + ++ +
Sbjct: 71 VRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV 129
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289
HRDL N L + Q K DFGLS R +
Sbjct: 130 HRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 164
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 3e-28
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 130 YSLGRKLGQGQFGTTFLCVE---KATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHL 185
+ L + LG G +G FL + T K +A K + K + + E R E +++ H+
Sbjct: 26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 85
Query: 186 AGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEAC 245
P ++ + A++ +H++++ GGELF + QR +TE + IV +E
Sbjct: 86 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 145
Query: 246 HSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
H LG+++RD+K EN L + DFGLS F T R +
Sbjct: 146 HKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAY 188
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 107 bits (268), Expect = 8e-28
Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 20/163 (12%)
Query: 338 ESLSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
++ + A L+E +K + SG + + E K+ + ++ + +A D +
Sbjct: 13 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 72
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF--------- 447
T+D+ E++AA+ + + E + F +DKD +G I EL +
Sbjct: 73 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 132
Query: 448 ----------GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ ++ I VD++ DG++ +EFV +
Sbjct: 133 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 110 bits (275), Expect = 8e-28
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 10/161 (6%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+ ++ KLG GQ+G + V K A K++ + + +VE+ +E +M +
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK 71
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY--TERKAADLTRIIVGVVEA 244
HPN++Q++G +++ E G L D + + + + I +E
Sbjct: 72 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+HRDL N L E +K DFGLS
Sbjct: 131 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD 168
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (273), Expect = 1e-27
Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 14/161 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
L + +G+G+FG L + + A K + + + E +M L H
Sbjct: 9 LKLLQTIGKGEFGDVMLGDYRGN--KVAVK-----CIKNDATAQAFLAEASVMTQLR-HS 60
Query: 190 NVIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGH--YTERKAADLTRIIVGVVEACH 246
N++Q++G E+ +++V E A G L D + RG + + +E
Sbjct: 61 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287
+HRDL N L K DFGL+
Sbjct: 121 GNNFVHRDLAARNVLVSEDNV---AKVSDFGLTKEASSTQD 158
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 1e-27
Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 17/155 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
+E+E+ + F SG + +K ++ ++ + D + G
Sbjct: 19 FTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGR 76
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---------- 448
+++ EFI A+ ++ ++ + AF +D D GYIT +E+
Sbjct: 77 IEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELP 136
Query: 449 ----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ +++ I +D++ DG++ EF +
Sbjct: 137 EEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 171
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (115), Expect = 2e-07
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 14/119 (11%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ A +F + D + G I E + L +D ++ + D+DN G +
Sbjct: 56 GDPTKFA--TFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYI 113
Query: 400 DYGEFIAAM------------LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
E + + L + E + F+ DK+ G +T E Q +
Sbjct: 114 TRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 172
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (272), Expect = 1e-27
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ ++LG GQFG + Q + A K I + ++ +E E ++M +L+ H
Sbjct: 6 LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLS-HE 59
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRI-IQRGHYTERKAADLTRIIVGVVEACHSL 248
++Q+ G + ++ E A G L + + R + ++ ++ + + +E S
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+HRDL N L ++ +K DFGLS +
Sbjct: 120 QFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDD 153
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 108 bits (270), Expect = 3e-27
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 6/164 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E Y K+G+G +G + + FA K I K E REI I+ L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-EGIPSTTIREISILKELK- 58
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
H N++++ + +V E + G A ++ + CH
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
V+HRDLKP+N L E LK DFGL+ F +
Sbjct: 119 RRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTH 159
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 4e-27
Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 6/160 (3%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEED--VEDVRREIRIMHHLAGHPNV 191
LG+GQF T + +K T + A K I + +D REI+++ L HPN+
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNI 62
Query: 192 IQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVM 251
I ++ A+ + +V + T + + +E H ++
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122
Query: 252 HRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
HRDLKP N L E LK DFGL+ F
Sbjct: 123 HRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTH 159
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (272), Expect = 6e-27
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 19/165 (11%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
Y+ + +G G FG + + + A K + + D RE++IM L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 73
Query: 190 NVIQIVGAY------EDAVAVHVVMELCAGG---ELFDRIIQRGHYTERKAADLTRIIVG 240
N++++ + +D V +++V++ + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 241 VVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ HS G+ HRD+KP+N L + A LK DFG + G
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRG 176
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 104 bits (259), Expect = 8e-27
Identities = 27/170 (15%), Positives = 57/170 (33%), Gaps = 26/170 (15%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL---------------MDSE 383
+++ + LK+ F D D +G + + +K Q +
Sbjct: 3 AIASDR---LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGL 59
Query: 384 IDGLMQAGDIDNSGTMDYGEFIAAMLHLN--------KIQREDHMYAAFSYFDKDGSGYI 435
D L + + + G++ +FI +L + DK+ G I
Sbjct: 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQI 119
Query: 436 TPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGK 485
DE G+ + + +VD + +G + E + ++D G+
Sbjct: 120 NADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFHFGR 169
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 38.5 bits (88), Expect = 6e-04
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDG 386
E F +DT+ +G ++L+EL ++ +D E+ G
Sbjct: 138 AAEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVELLG 176
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 101 bits (254), Expect = 8e-27
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 377 ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT 436
A L D+++ + A + + EF A + +K D + AF D+D SG+I
Sbjct: 3 AGLKDADVAAALAACSAA--DSFKHKEFFAKVGLASK--SLDDVKKAFYVIDQDKSGFIE 58
Query: 437 PDELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
DEL+ Q F L D + + + + D+D DG I EF AM++
Sbjct: 59 EDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 60.0 bits (145), Expect = 7e-12
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 335 VIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA---NLMDSEIDGLMQAG 391
L+ + + +K+ F +ID D SG+I +ELK LQ L D+E + G
Sbjct: 29 FAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADG 88
Query: 392 DIDNSGTMDYGEFIAAM 408
D D G + EF A +
Sbjct: 89 DKDGDGMIGVDEFAAMI 105
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 34.9 bits (80), Expect = 0.003
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 6/47 (12%)
Query: 447 FGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLG----KKVFK 489
GL D + + + EF A + + KK F
Sbjct: 3 AGLKDADVAAALAACS--AADSFKHKEFFAKVGLASKSLDDVKKAFY 47
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 1e-26
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
L + + E Y +G G +G+ + T A K + R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRE 67
Query: 179 IRIMHHLAGHPNVIQIVGAYEDAVAV----HVVMELCAGGELFDRIIQRGHYTERKAADL 234
+R++ H+ H NVI ++ + A ++ V + G + I++ T+ L
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRL 294
I+ ++ HS ++HRDLKP N E+ LK +DFGL+ +T V R
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMTGYVATRW 183
Query: 295 H 295
+
Sbjct: 184 Y 184
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 100 bits (250), Expect = 3e-26
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I + A + G+ ++ +F A + K + + F D D SG+I +
Sbjct: 6 LKADDIKKALDA--VKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEE 61
Query: 439 ELQTACQQFGL-----DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
EL+ + F D + + ++ D+D DG+I EF ++ ++
Sbjct: 62 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 109
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 64.2 bits (156), Expect = 3e-13
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV---GANLMDSEIDGLMQAGDIDN 395
L +K++FK ID D SG+I EELK L+ G +L D+E ++A D D
Sbjct: 34 GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDG 93
Query: 396 SGTMDYGEFIAAM 408
G + EF +
Sbjct: 94 DGKIGIDEFETLV 106
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 35.7 bits (82), Expect = 0.002
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 455 EDIIREVDQ-DNDGRIDYSEFVAMMQDSGLGKKVFK 489
+DI + +D +G ++ +F A++ + K
Sbjct: 9 DDIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVK 44
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 7e-26
Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 10/163 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+ +++G GQFG L + + A K+I + + ED E +M L HP
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHP 60
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACHSL 248
++Q+ G + + +V E G L D + + + + + +
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 249 GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
V+HRDL N L Q +K DFG++ F
Sbjct: 121 CVIHRDLAARNCLVGENQV---IKVSDFGMTRFVLDDQYTSST 160
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 8e-26
Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 11/163 (6%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG-- 187
Y ++G+G +G F + F + + E RE+ ++ HL
Sbjct: 9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68
Query: 188 HPNVIQIVGAYEDA-----VAVHVVMELCAGGEL-FDRIIQRGHYTERKAADLTRIIVGV 241
HPNV+++ + + +V E + + D+ ++
Sbjct: 69 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128
Query: 242 VEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284
++ HS V+HRDLKP+N L + + K DFGL+ +
Sbjct: 129 LDFLHSHRVVHRDLKPQNILVTSSGQI---KLADFGLARIYSF 168
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 101 bits (253), Expect = 1e-25
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 17/151 (11%)
Query: 338 ESLSEEEIA-GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMD--------SEIDGLM 388
+ LSEEEI K +F + D+ I+++EL+ L R+ + D ++
Sbjct: 11 KVLSEEEIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 69
Query: 389 QAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
D D +G + EF + F FD D SG ++ E++ A + G
Sbjct: 70 NLMDRDGNGKLGLVEFNILWNR------IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAG 123
Query: 449 LDDT-QLEDIIREVDQDNDGRIDYSEFVAMM 478
QL +I D++ ID+ FV +
Sbjct: 124 FKLPCQLHQVIVARFADDELIIDFDNFVRCL 154
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 73.2 bits (179), Expect = 1e-15
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
+F+ D D SG ++ E++ ++ G L ++ D+ +D+ F+ +
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFVRCL 154
Query: 409 LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
+ L + ++ F D + +G I D +
Sbjct: 155 VRL------EILFKIFKQLDPENTGTIQLDLIS 181
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 49.7 bits (118), Expect = 1e-07
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 11/90 (12%)
Query: 410 HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT----------QLEDIIR 459
L++ + +D+ FS D I+ ELQT + ++
Sbjct: 12 VLSEEEIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVN 70
Query: 460 EVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
+D+D +G++ EF + +F+
Sbjct: 71 LMDRDGNGKLGLVEFNILWNRIRNYLTIFR 100
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 2e-25
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 25/159 (15%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKE-------FACKSIAKRKLTTEEDVEDVRREI 179
++ LG+ LG+G FG L K+ A K + + TE+D+ D+ E+
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEM 69
Query: 180 RIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG--------------- 224
+M + H N+I ++GA ++V++E + G L + + R
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 225 -HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLF 262
+ + + +E S +HRDL N L
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.2 bits (246), Expect = 2e-25
Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQ--AGDIDNSGTMDYGEFI 405
KE F++ D G I + ++ +G N ++E+ ++ D S +D+ F+
Sbjct: 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61
Query: 406 A---AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLE-DIIREV 461
A+ + F FDK+G+G + EL+ G T+ E + +
Sbjct: 62 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG 121
Query: 462 DQDNDGRIDYSEFVAMM 478
+D++G I+Y F+ +
Sbjct: 122 HEDSNGCINYEAFLKHI 138
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.9 bits (131), Expect = 8e-10
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
E F++ D + +G + EL+ L +G + + E++ ++ D++G ++Y F+ +
Sbjct: 80 LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138
Query: 409 L 409
L
Sbjct: 139 L 139
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 97.3 bits (242), Expect = 2e-25
Identities = 56/78 (71%), Positives = 65/78 (83%)
Query: 333 DRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
D+ +AE LSEEEI GLKE+FKMIDTDNSG IT +ELK GL+RVG+ LM+SEI LM A D
Sbjct: 10 DKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD 69
Query: 393 IDNSGTMDYGEFIAAMLH 410
ID SGT+DYGEFIAA +H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 74.6 bits (183), Expect = 2e-17
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL 454
+SG +D + A L++ + + F D D SG IT DEL+ ++ G + +
Sbjct: 2 SSGHIDDDDKHMAE-RLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSELMES 59
Query: 455 E--DIIREVDQDNDGRIDYSEFVAMM 478
E D++ D D G IDY EF+A
Sbjct: 60 EIKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 99.7 bits (247), Expect = 3e-25
Identities = 32/156 (20%), Positives = 48/156 (30%), Gaps = 16/156 (10%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEID-----------GLMQ 389
S+ + +K F ID D G IT + + +R
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQREDH-----MYAAFSYFDKDGSGYITPDELQTAC 444
+ +D FI +M + K + F D + I+ DE
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 445 QQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
GLD T +D +NDG + EFV D
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 42.7 bits (99), Expect = 2e-05
Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 7/106 (6%)
Query: 351 MFKMIDTDNSGYITLEELKKGL-----QRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFI 405
+ I + ++++ + +A D + + E+
Sbjct: 58 DNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYG 117
Query: 406 AAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDD 451
L + A+F D + G ++ +E A F ++D
Sbjct: 118 IFFGMLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMND 161
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 4e-25
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 119 LGRKTGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE 178
+G T + + Y + +G G G + + A K + R + + RE
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRE 66
Query: 179 IRIMHHLAGHPNVIQIVGAY------EDAVAVHVVMELCAGGELFDRIIQRGHYTERKAA 232
+ +M + H N+I ++ + E+ V++VMEL + + +
Sbjct: 67 LVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMS 122
Query: 233 DLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
L ++ ++ HS G++HRDLKP N + + + LK +DFGL+ +
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPY 178
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 97.0 bits (241), Expect = 5e-25
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I+ + A + GT DY F + K + + + F DKD SG+I +
Sbjct: 6 LKADDINKAISA--FKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEE 61
Query: 439 ELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
EL+ + F L+DT+ + ++ D D+DG+I EF M+ +
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 63.4 bits (154), Expect = 4e-13
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR---VGANLMDSEIDGLMQAGDIDNSG 397
++ + +KE+F+++D D SG+I EELK L+ G +L D+E L+ AGD D+ G
Sbjct: 39 TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 398 TMDYGEFIAAM 408
+ EF +
Sbjct: 96 KIGADEFAKMV 106
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 99.7 bits (247), Expect = 5e-25
Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 25/166 (15%)
Query: 340 LSEEEIAGLKEMFK-MIDTDNSGYITLEELKKGLQRVGA---------------NLMDSE 383
L++ + +K F +D ++ G I + + + R ++ E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 384 IDGLMQAGDIDNSGTMDYGEFIAAMLHL---------NKIQREDHMYAAFSYFDKDGSGY 434
L DI+ + + E++A ++ + F D G G
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 435 ITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
+ +E Q C+ F L + + + D + + +
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYYR 167
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 50.0 bits (118), Expect = 8e-08
Identities = 14/124 (11%), Positives = 35/124 (28%), Gaps = 11/124 (8%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE---------IDGL 387
+S+ +++ D + ++ EE ++ A I L
Sbjct: 51 YKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFL 110
Query: 388 MQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
+ D+ G +D EF + + + A ++ G + + +
Sbjct: 111 FKGMDVSGDGIVDLEEFQNYCKNFQL--QCADVPAVYNVITDGGKVTFDLNRYKELYYRL 168
Query: 448 GLDD 451
Sbjct: 169 LTSP 172
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 6e-25
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 12/161 (7%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA 186
+E L KLGQG FG ++ T A K++ + E +E ++M L
Sbjct: 16 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKL- 69
Query: 187 GHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEA 244
H ++Q+ + +++V E + G L D + + + D+ I +
Sbjct: 70 RHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 128
Query: 245 CHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ +HRDL+ N L E K DFGL+
Sbjct: 129 VERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDN 166
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 7e-25
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 6/158 (3%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAK--RKLTTEEDVEDVRREIRIMHHLAG 187
+ + LG G FGT + + ++ K R+ T+ + +++ E +M +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-D 69
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS 247
+P+V +++G + + + G L + + + + I +
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
++HRDL N L Q +K DFGL+
Sbjct: 130 RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAE 164
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 7e-25
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 6/172 (3%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAG 187
E + K+G+G +G + K T + A K I + TE REI ++ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL-N 59
Query: 188 HPNVIQIVGAYEDAVAVHVVMELCA-GGELFDRIIQRGHYTERKAADLTRIIVGVVEACH 246
HPN+++++ +++V E + F ++ + CH
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVWLRLHFLF 298
S V+HRDLKP+N L E +K DFGL+ F + + +
Sbjct: 120 SHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 97.7 bits (242), Expect = 3e-24
Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 23/164 (14%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG-----ANLMDSEIDGLMQAGDID 394
+ I K MF +D +++G I+L+E+ + A ++
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 395 NSGTM-----DYGEFIAAMLHLNKIQREDH-----------MYAAFSYFDKDGSGYITPD 438
+G D+ +I L + E + A F DKD +G IT D
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 439 ELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEFVAMMQD 480
E + + G+ + E+ R D D G++D E
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 169
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 49.2 bits (116), Expect = 2e-07
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
++ +F ++D D +G ITL+E K + G + + + DID SG
Sbjct: 97 KNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG 156
Query: 398 TMDYGEFIAAML 409
+D E L
Sbjct: 157 QLDVDEMTRQHL 168
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 37.3 bits (85), Expect = 0.002
Identities = 18/92 (19%), Positives = 29/92 (31%)
Query: 365 LEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAF 424
+ + + L+ D L D D +G + E+ A IQ + F
Sbjct: 88 ATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETF 147
Query: 425 SYFDKDGSGYITPDELQTACQQFGLDDTQLED 456
D D SG + DE+ F +
Sbjct: 148 RVCDIDESGQLDVDEMTRQHLGFWYTMDPACE 179
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 97.6 bits (242), Expect = 3e-24
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 17/155 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE-IDGLMQAGDIDNSGT 398
EI + F SG + E+ K ++ + + L D DN+G
Sbjct: 22 FDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGF 79
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT----------ACQQFG 448
+ + EFI + ++ E+ + AF +D + GYIT DE+ T +
Sbjct: 80 IHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLN 139
Query: 449 LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQ 479
D+ E I + +D++ DG I EF +
Sbjct: 140 EDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.2 bits (145), Expect = 3e-11
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
S E+ A +F + D DN+G+I EE L ++ ++ + D+++ G +
Sbjct: 59 GSPEDFA--NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYI 116
Query: 400 DYGEFIAAMLHLNKI------------QREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446
+ E + + + K+ E + F DK+ GYIT DE + +
Sbjct: 117 TFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.6 bits (89), Expect = 6e-04
Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 426 YFDKDGSGYITPDELQTACQQFGL---DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482
+ SG + ++ +QF + + D+DN+G I + EF+ ++ +
Sbjct: 34 FLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTS 93
Query: 483 LGKK 486
G
Sbjct: 94 RGTL 97
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.5 bits (86), Expect = 0.002
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374
E+ E + K++FK++D + GYITL+E ++G +
Sbjct: 142 EATPEMRV---KKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.8 bits (245), Expect = 8e-24
Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 128 EMYSLGRKLGQGQFGTTFLCVEKAT----QKEFACKSIAKRKLTTEEDVEDVRREIRIMH 183
+ + +G G+FG + + K + + A K++ + TE+ D E IM
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIMG 64
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVV 242
H N+I++ G + ++ E G L + ++ G ++ + + R I +
Sbjct: 65 QF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 123
Query: 243 EACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ ++ +HRDL N L K DFGLS
Sbjct: 124 KYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDD 163
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.8 bits (245), Expect = 1e-23
Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 21/167 (12%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
L +G+G+FG + K +E A K + R EE EI L H
Sbjct: 5 IVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSR----EERSWFREAEIYQTVML-RHE 57
Query: 190 NVIQIVGAYED----AVAVHVVMELCAGGELFDRIIQRGHYTERK-------AADLTRII 238
N++ + A + +V + G LFD + + E A+ L +
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 239 VGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
+ +V + HRDLK +N L ++ D GL++
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSA 161
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 95.3 bits (236), Expect = 1e-23
Identities = 28/156 (17%), Positives = 62/156 (39%), Gaps = 17/156 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEI-DGLMQAGDIDNSGT 398
++ E+ L FK + SG + E K+ + + S L A D +G+
Sbjct: 10 FTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 67
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---------- 448
+ + +F+ A+ L + + + F+ +D + GYI +E+ +
Sbjct: 68 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 127
Query: 449 ----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480
++ +++D++ DG + EF+ Q+
Sbjct: 128 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 163
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 95.4 bits (236), Expect = 2e-23
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 340 LSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSG 397
S EI L E+FK I + + G I EE + L + D + D ++G
Sbjct: 11 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNG 69
Query: 398 TMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQT------ACQQFGLD 450
+ + EF A+ + +D ++ +F +D G+I E++ A L
Sbjct: 70 ILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK 129
Query: 451 DTQLED----IIREVDQDNDGRIDYSEFVAMMQDS 481
DT +ED E D +DG+ID E+ +++
Sbjct: 130 DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 164
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 91.6 bits (227), Expect = 4e-23
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I + A + + D+ +F + K + D + F DKD SG+I D
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEED 61
Query: 439 ELQTACQQFG-----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481
EL + + F L + + ++ D+D DG+I EF ++ +S
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 61.5 bits (149), Expect = 2e-12
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGA---NLMDSEIDGLMQAGDIDN 395
L ++ +K++F ++D D SG+I +EL L+ + +L E LM AGD D
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 93
Query: 396 SGTMDYGEFIAAM 408
G + EF +
Sbjct: 94 DGKIGVEEFSTLV 106
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 38.4 bits (89), Expect = 2e-04
Identities = 8/72 (11%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRID 470
+ + + + A F S + ++ + +D+D G I+
Sbjct: 2 MTDLLSAEDIKKAIGAFTAADS--FDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIE 59
Query: 471 YSEFVAMMQDSG 482
E ++++
Sbjct: 60 EDELGSILKGFS 71
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.5 bits (239), Expect = 7e-23
Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMH 183
++ LG+ LG+G FG K C+++A + L T + + E++I+
Sbjct: 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 71
Query: 184 HLAGHPNVIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGHY---------------- 226
H+ H NV+ ++GA + + V++E C G L + + +
Sbjct: 72 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131
Query: 227 TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286
T + + +E S +HRDL N L E+ +K DFGL+
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDP 188
Query: 287 TF 288
+
Sbjct: 189 DY 190
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 96.5 bits (239), Expect = 7e-23
Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 31/186 (16%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMH 183
+ R +G+G FG F +A + L + + D +RE +M
Sbjct: 12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 71
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHY----------------- 226
+PN+++++G + ++ E A G+L + + +
Sbjct: 72 EF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 130
Query: 227 -------TERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279
+ + + R + + +HRDL N L E +K DFGLS
Sbjct: 131 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLS 187
Query: 280 MFFRPG 285
Sbjct: 188 RNIYSA 193
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.1 bits (238), Expect = 1e-22
Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 17/178 (9%)
Query: 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKL---TTEEDVEDVRREIRIMH 183
+E ++ R+LGQG FG + V K K+ +A + + + + + E +M
Sbjct: 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMK 78
Query: 184 HLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGH----------YTERKAAD 233
+V++++G V+MEL G+L + + K
Sbjct: 79 EF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137
Query: 234 LTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
+ I + ++ +HRDL N + E+ +K DFG++ +R
Sbjct: 138 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKG 192
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 90.4 bits (224), Expect = 1e-22
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPD 438
L +I +Q T + +F L+K + F + D D SGY+ D
Sbjct: 6 LSAEDIAAALQECQDP--DTFEPQKFFQTS-GLSK-MSASQVKDIFRFIDNDQSGYLDGD 61
Query: 439 ELQTACQQF-----GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
EL+ Q+F L +++ + ++ D D DG+I EF M+
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 66.5 bits (162), Expect = 3e-14
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV---GANLMDSEIDGLMQAGDIDN 395
LS+ + +K++F+ ID D SGY+ +ELK LQ+ L +SE LM A D D
Sbjct: 34 GLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDG 93
Query: 396 SGTMDYGEFIAAM 408
G + EF +
Sbjct: 94 DGKIGADEFQEMV 106
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 92.4 bits (228), Expect = 2e-22
Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 23/168 (13%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----GANLMDSEIDGLM 388
++ + + I K MF +D + +G ITL+E+ A ++ +
Sbjct: 2 KLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVC 61
Query: 389 QAGD-----IDNSGTMDYGEFIAAMLHLNKIQR-----------EDHMYAAFSYFDKDGS 432
++ + + +F+ L + + A F FDKDGS
Sbjct: 62 VEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGS 121
Query: 433 GYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
G IT DE + + G E R D DN G +D E
Sbjct: 122 GTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQH 169
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 47.7 bits (112), Expect = 6e-07
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A + +F + D D SG ITL+E K + G + + + + D+DN+
Sbjct: 98 ARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNA 157
Query: 397 GTMDYGEFIAAML 409
G +D E L
Sbjct: 158 GDLDVDEMTRQHL 170
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 90.8 bits (224), Expect = 2e-22
Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L +++I +KE F MID D G+++ E++K +++G D E+ +++ + TM
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM 60
Query: 400 DYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF--GLDDTQLEDI 457
F + + E+ + AF+ FD+ + + + ++ + + ++
Sbjct: 61 FLSIFSDKLSGTD---SEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 117
Query: 458 IREVDQDNDGRIDYSEFVAMMQDSG 482
+E + G+ DY +F AM++ SG
Sbjct: 118 FKEAPVE-GGKFDYVKFTAMIKGSG 141
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 89.4 bits (221), Expect = 2e-21
Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 17/169 (10%)
Query: 331 IGDRVIAESLSEEEIA-GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDS------- 382
I + +EE+I G + +F + I+ EL+ L+RV A D
Sbjct: 2 IEANIEEIEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSI 60
Query: 383 -EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
++ D D SG + EF + D D SG + E++
Sbjct: 61 ETCKIMVDMLDEDGSGKLGLKEFYILWTK------IQKYQKIYREIDVDRSGTMNSYEMR 114
Query: 442 TACQQFGLDDTQ-LEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
A ++ G L +I D++ ID+ FV + + K+FK
Sbjct: 115 KALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFK 163
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 66.7 bits (162), Expect = 1e-13
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
+++++ ID D SG + E++K L+ G L ++ ++ A D+ +D+ F+ +
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCL 152
Query: 409 LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
+ L + ++ F D + +G I D +
Sbjct: 153 VRL------EILFKIFKQLDPENTGTIQLDLIS 179
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 88.2 bits (217), Expect = 2e-21
Identities = 28/140 (20%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
K++F + D G I + L L+ +G N + + ++ A + + I
Sbjct: 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63
Query: 408 MLHLNKIQ-------REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDII 458
++ +N+ + + + AF FDK+ +G ++ +L+ G T ++++++
Sbjct: 64 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 123
Query: 459 REVDQDNDGRIDYSEFVAMM 478
+ V+ D++G IDY +F+ +
Sbjct: 124 KGVEVDSNGEIDYKKFIEDV 143
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.5 bits (93), Expect = 8e-05
Identities = 18/63 (28%), Positives = 41/63 (65%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+ F++ D +++G +++ +L+ L +G L D+E+D L++ ++D++G +DY +FI
Sbjct: 83 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIED 142
Query: 408 MLH 410
+L
Sbjct: 143 VLR 145
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.4 bits (226), Expect = 4e-21
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 11/159 (6%)
Query: 132 LGRKLGQGQFGTTFLCV---EKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH 188
+G+G FG + + A KS+ ++T +V E IM + H
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFS-H 87
Query: 189 PNVIQIVGA-YEDAVAVHVVMELCAGGELFDRIIQRGH-YTERKAADLTRIIVGVVEACH 246
PNV+ ++G + VV+ G+L + I H T + + ++
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 147
Query: 247 SLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285
S +HRDL N + E+ +K DFGL+
Sbjct: 148 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDK 183
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.7 bits (217), Expect = 5e-21
Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN-----LMDSEIDGLMQAGDIDNSGTMDYG 402
+ F + G + EEL++ L + G N ++ D D++G M +
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 403 EFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ--FGLDDTQLEDIIRE 460
F + F D+DGSG + EL+ A + L L I++
Sbjct: 61 AFKELWAA------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114
Query: 461 VDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
++ GRI + ++VA F+
Sbjct: 115 YSKN--GRIFFDDYVACCVKLRALTDFFR 141
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.3 bits (182), Expect = 3e-16
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
F +D D SG + EL++ + +G L + +++ +G + + +++A +
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK--RYSKNGRIFFDDYVACCVK 132
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYIT 436
L + F D G
Sbjct: 133 L------RALTDFFRKRDHLQQGSAN 152
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.3 bits (213), Expect = 2e-20
Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 16/157 (10%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-----LMDSEIDGLMQAGDID 394
+ L F + G I +EL++ L + G ++ D D
Sbjct: 1 FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ--FGLDDT 452
SGTM + EF LN ++ FD D SG + P ELQ A F L
Sbjct: 60 MSGTMGFNEFKELWAVLNGWRQHFIS------FDTDRSGTVDPQELQKALTTMGFRLSPQ 113
Query: 453 QLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
+ I + +G+I + +++A F+
Sbjct: 114 AVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFR 148
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (163), Expect = 9e-14
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 350 EMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409
+ F DTD SG + +EL+K L +G L ++ + + +G + + ++IA +
Sbjct: 81 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK--RYSTNGKITFDDYIACCV 138
Query: 410 HLNKIQREDHMYAAFSYFDKDGSGYIT 436
L + +F D G +
Sbjct: 139 KL------RALTDSFRRRDTAQQGVVN 159
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.4 bits (213), Expect = 2e-20
Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 25/163 (15%)
Query: 340 LSEEEIAGLKEMFK--------MIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAG 391
L+++EI F +++ + E++ + + AN I +
Sbjct: 11 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE-LKANPFKERI---CRVF 66
Query: 392 DID-NSGTMDYGEFIAAM-LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG- 448
++ + +F+ + + + + + AF FD D G + ++L
Sbjct: 67 STSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG 126
Query: 449 ------LDDTQLED----IIREVDQDNDGRIDYSEFVAMMQDS 481
L ++++ I+ E D D DG I+ SEF ++ S
Sbjct: 127 EGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 169
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 85.5 bits (210), Expect = 2e-20
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 340 LSEEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLMDSEIDGLMQA-GDIDNS 396
LS++EI LK++F++ D G + +L + +G N + ++ + + S
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
+ L + AF FD++G G+I+ EL+ G L D +
Sbjct: 61 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 120
Query: 455 EDIIREVD--QDNDGRIDYSEFVAMM 478
++II+ D +D +G + Y +FV +
Sbjct: 121 DEIIKLTDLQEDLEGNVKYEDFVKKV 146
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 40.4 bits (93), Expect = 1e-04
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYGEFIAAM 408
FK D + G+I+ EL+ L +G L D ++D +++ D+ D G + Y +F+ +
Sbjct: 87 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKV 146
Query: 409 LH 410
+
Sbjct: 147 MA 148
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 86.0 bits (212), Expect = 5e-20
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE-IDGLMQAGDIDNSGT 398
+EEE++ + F SG IT +E + + + ++ D ++ GT
Sbjct: 22 FTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGT 79
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT------ 452
+D+ E++ A+ + + + AFS +D DG+G I+ +E+ +
Sbjct: 80 LDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKH 139
Query: 453 ----------QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
+ E I + +D ++ EF+
Sbjct: 140 LPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTL 176
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.5 bits (112), Expect = 8e-07
Identities = 18/121 (14%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ A + +F+ D ++ G + +E L A + +++ D+D +GT+
Sbjct: 59 ADPKAYA--QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 400 DYGEFIAAMLHLNKI--------------QREDHMYAAFSYFDKDGSGYITPDELQTACQ 445
E + + + K+ E + +F K +T E
Sbjct: 117 SKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTL 176
Query: 446 Q 446
Sbjct: 177 A 177
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 81.4 bits (201), Expect = 6e-20
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSE 473
E+ + AF FD +G G I DE + Q+ G L D ++E+ ++E D+D +G ID E
Sbjct: 1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 60
Query: 474 FVAMMQDS 481
F+ +++ S
Sbjct: 61 FMDLIKKS 68
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 70.3 bits (172), Expect = 5e-16
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-DSEIDGLMQAGDIDNSGTMD 400
EEE + FK+ D + G I +E K +Q+VG + D+E++ M+ D D +G +D
Sbjct: 1 EEE---ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 57
Query: 401 YGEFIAAM 408
EF+ +
Sbjct: 58 IPEFMDLI 65
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 84.6 bits (208), Expect = 7e-20
Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 16/156 (10%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG--------ANLMDSEIDGLMQAGDID 394
EE+ + +F + D+ ++ EL L +V ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQL 454
+G + + A + FD D SG I EL A + G +
Sbjct: 60 TTGKLGF------EEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 455 E-DIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
+I D G +D+ F++ + + FK
Sbjct: 114 LYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFK 149
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 71.5 bits (174), Expect = 3e-15
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
+ ++K D D SG I EL + G +L + +++ D G MD+ FI+ +
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCL 138
Query: 409 LHLNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
+ L D M+ AF DKDG+G I + +
Sbjct: 139 VRL------DAMFRAFKSLDKDGTGQIQVNIQE 165
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 83.6 bits (205), Expect = 7e-20
Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 350 EMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA--- 406
+FK ID + G ++ EE+K + + A + + + ++ D D +G +D EF
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDND 466
++ + + + + D DG G +T +E+ + ++ G ++ + + + D + D
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG--IEKVAEQVMKADANGD 121
Query: 467 GRIDYSEFVAMM 478
G I EF+
Sbjct: 122 GYITLEEFLEFS 133
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 40.1 bits (92), Expect = 1e-04
Identities = 9/58 (15%), Positives = 20/58 (34%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
A F D +G G ++ +E++ + + + D DG + +
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 37.4 bits (85), Expect = 8e-04
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409
++K++D D G +T EE+ ++ G ++ + D + G + EF+ L
Sbjct: 80 LYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEFLEFSL 134
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 82.4 bits (202), Expect = 2e-19
Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYG 402
+ + K+ F + D +G I + L+ G N +EI + + +
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVD-MEQFL 60
Query: 403 EFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLD--DTQLEDIIRE 460
+ + + + F FDKD +G I EL+ G + +++++++
Sbjct: 61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKG 120
Query: 461 VDQDNDGRIDYSEFVAMM 478
V DG ++Y +FV M+
Sbjct: 121 VP-VKDGMVNYHDFVQMI 137
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.9 bits (97), Expect = 2e-05
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+ F++ D D +G I + EL+ L +G L + E+D L++ + + G ++Y +F+
Sbjct: 78 FVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKD-GMVNYHDFVQM 136
Query: 408 ML 409
+L
Sbjct: 137 IL 138
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 78.0 bits (192), Expect = 1e-18
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEF 474
+ + AF FD D SG IT +L+ ++ G + T +L+++I E D+++D ID EF
Sbjct: 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 67
Query: 475 VAMMQDSGL 483
+ +M+ + L
Sbjct: 68 IRIMKKTSL 76
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 68.7 bits (168), Expect = 3e-15
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
S EE + + F++ D DNSG IT+++L++ + +G NL + E+ ++ D ++ +D
Sbjct: 7 SREE---ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 401 YGEFIAAM 408
EFI M
Sbjct: 64 EDEFIRIM 71
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 83.5 bits (205), Expect = 4e-18
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHH----- 184
Y L RKLG G F T +L + A K + K+ TE ++++ R+
Sbjct: 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 74
Query: 185 -LAGHPNVIQIVGAYEDAVA--VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGV 241
G ++++++ + VHVVM GE +I++ + + +I +
Sbjct: 75 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 134
Query: 242 VEACHSL----GVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRVW 291
+ + G++H D+KPEN L + ++P I ++ +
Sbjct: 135 LLGLDYMHRRCGIIHTDIKPENVLM--EIVDSPENLIQIKIADLGNACWYDEHY 186
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 76.5 bits (188), Expect = 4e-18
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDNDGRIDYSEF 474
E+ + F FDK+ G+I +EL + G +ED++++ D++NDGRID+ EF
Sbjct: 8 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 67
Query: 475 VAMMQ 479
+ MM+
Sbjct: 68 LKMME 72
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 67.6 bits (165), Expect = 6e-15
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A+ SEEE L F++ D + G+I +EEL + L+ G ++++ +I+ LM+ D +N
Sbjct: 3 AKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 59
Query: 397 GTMDYGEFIAAM 408
G +D+ EF+ M
Sbjct: 60 GRIDFDEFLKMM 71
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.6 bits (192), Expect = 9e-18
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
+ +EI L + FK +D DNSG +++EE + + + ++ D D
Sbjct: 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPEL----QQNPLVQRVIDIFDTDG 61
Query: 396 SGTMDYGEFIAAMLHLNK-IQREDHMYAAFSYFDKDGSGYITPDELQ---TACQQFGLDD 451
+G +D+ EFI + + +E + AF +D D GYI+ EL L D
Sbjct: 62 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 121
Query: 452 TQLEDII----REVDQDNDGRIDYSEFVAMMQDSGLGKK 486
TQL+ I+ D+D DGRI + EF A++ + KK
Sbjct: 122 TQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKK 160
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.4 bits (185), Expect = 1e-17
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
+ +L+EE+IA KE F + D DN+G I+ EL ++ +G + ++E++ LM D+D +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 397 GTMDYGEFIAAM 408
+++ EF+A M
Sbjct: 61 HQIEFSEFLALM 72
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.0 bits (171), Expect = 8e-16
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGR 468
L + Q + AF+ FDKD +G I+ EL T + G + ++ D++ E+D D + +
Sbjct: 4 LTEEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 469 IDYSEFVAMM 478
I++SEF+A+M
Sbjct: 63 IEFSEFLALM 72
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 75.0 bits (184), Expect = 1e-17
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 408 MLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT--QLEDIIREVDQDN 465
M +K + E+ + F FDK+ GYI +EL+ Q G T +E+++++ D++N
Sbjct: 5 MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 64
Query: 466 DGRIDYSEFVAMMQ 479
DGRIDY EF+ M+
Sbjct: 65 DGRIDYDEFLEFMK 78
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 66.9 bits (163), Expect = 1e-14
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
++ +EEE L ++F+M D + GYI LEELK LQ G + + +I+ LM+ GD +N
Sbjct: 9 SKGKTEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 65
Query: 397 GTMDYGEFIAAM 408
G +DY EF+ M
Sbjct: 66 GRIDYDEFLEFM 77
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 74.7 bits (183), Expect = 1e-17
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEF 474
E+ + AF FDKDG+GYI+ EL+ G L D +++++IRE D D DG+++Y EF
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 61
Query: 475 VAMM 478
V MM
Sbjct: 62 VQMM 65
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.6 bits (162), Expect = 1e-14
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
SEEEI +E F++ D D +GYI+ EL+ + +G L D E+D +++ DID G ++
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 57
Query: 401 YGEFIAAM 408
Y EF+ M
Sbjct: 58 YEEFVQMM 65
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 73.9 bits (181), Expect = 4e-17
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
LSEE IA K F M D D G I+ +EL ++ +G N E+D +++ D D SGT+
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 67
Query: 400 DYGEFIAAMLH 410
D+ EF+ M+
Sbjct: 68 DFEEFLVMMVR 78
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 69.2 bits (169), Expect = 2e-15
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 407 AMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQD 464
A L++ + AAF FD DG G I+ EL T + G +L+ II EVD+D
Sbjct: 4 ARAFLSEEMIAE-FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED 62
Query: 465 NDGRIDYSEFVAMM 478
G ID+ EF+ MM
Sbjct: 63 GSGTIDFEEFLVMM 76
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 73.1 bits (179), Expect = 8e-17
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNS-GYITLEELKKGLQRVGANLMDSEIDGLMQAGD 392
+ E L+EE+ K F + G I+ +EL K ++ +G N E+ ++ D
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62
Query: 393 IDNSGTMDYGEFIAAM 408
D SGT+D+ EF+ M
Sbjct: 63 EDGSGTVDFDEFLVMM 78
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 69.6 bits (170), Expect = 1e-15
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 406 AAMLHLNKIQREDHMYAAFSYFDKDGS-GYITPDELQTACQQFGLDDT--QLEDIIREVD 462
AA+ L + Q+ + AAF F G I+ EL + G + T +L+++I EVD
Sbjct: 4 AAVEQLTEEQKNE-FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62
Query: 463 QDNDGRIDYSEFVAMM 478
+D G +D+ EF+ MM
Sbjct: 63 EDGSGTVDFDEFLVMM 78
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 74.8 bits (183), Expect = 3e-16
Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 32/166 (19%)
Query: 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACK-----SIAKRKLTTEEDVEDVR-------- 176
++G+ +G+G+ F C + E K + +K+ + D D+
Sbjct: 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60
Query: 177 --REIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADL 234
E R + L V ++ + V+MEL + ++
Sbjct: 61 ARNEFRALQKLQ-GLAVPKVYAWEGN----AVLMELIDAK-------ELYRVRVENPDEV 108
Query: 235 TRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280
+I+ V + G++H DL N L + + IDF S+
Sbjct: 109 LDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG----IWIIDFPQSV 150
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 70.7 bits (173), Expect = 3e-16
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 423 AFSYFDKDGSGYITPDELQTACQQ--FGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479
F FDK+ G ++ DE + + E+D D +G ++ EF + ++
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 65.7 bits (160), Expect = 2e-14
Identities = 12/61 (19%), Positives = 28/61 (45%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
K +F+ D + G ++L+E ++ +I + D+D +G ++ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 408 M 408
+
Sbjct: 63 I 63
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 33.8 bits (77), Expect = 0.004
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 349 KEMFKMIDTDNSGYITLEELKKGLQRV 375
+ F+ ID D +G + +E ++++
Sbjct: 40 VKFFEEIDVDGNGELNADEFTSCIEKM 66
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 70.4 bits (172), Expect = 5e-16
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
L+EE+IA KE F + D D G IT +EL ++ +G N ++E+ ++ D D +GT+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 400 DYGEFIAAM 408
D+ EF+ M
Sbjct: 62 DFPEFLTMM 70
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 66.2 bits (161), Expect = 2e-14
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGR 468
L + Q + AFS FDKDG G IT EL T + G + +L+D+I EVD D +G
Sbjct: 2 LTEEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 469 IDYSEFVAMM 478
ID+ EF+ MM
Sbjct: 61 IDFPEFLTMM 70
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 70.3 bits (172), Expect = 6e-16
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMD 400
+ ++IA + +FK DT+ G I+ EL L+ +G ++ E+ +M D D G +
Sbjct: 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFIS 59
Query: 401 YGEFIAAMLHLNKIQREDHMYAAF 424
+ EF + ++ + F
Sbjct: 60 FDEFTDFARANRGLVKD--VSKIF 81
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 68.4 bits (167), Expect = 3e-15
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQF-GLDDTQLEDIIREVDQDNDGRIDYSE 473
Q F FD +G G I+ EL A + + ++ ++ E+D D DG I + E
Sbjct: 3 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 62
Query: 474 FVAMMQDS-GLGKKVFK 489
F + + GL K V K
Sbjct: 63 FTDFARANRGLVKDVSK 79
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 76.2 bits (186), Expect = 8e-16
Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 25/177 (14%)
Query: 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI 393
R LSEE+ L+++F SG + ++LK+ L + + + + L +
Sbjct: 110 RPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVEN 169
Query: 394 DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQ 453
D G M Y +A L + + S + ++ D
Sbjct: 170 DTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALF 229
Query: 454 LEDIIREV-------------------------DQDNDGRIDYSEFVAMMQDSGLGK 485
E D D G++ E +++D+ + +
Sbjct: 230 RYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPE 286
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 75.8 bits (185), Expect = 8e-16
Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 399 MDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDT---QLE 455
D + + +++ + +++ D D SG ++ +E+Q + + ++ + E
Sbjct: 234 EDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFE 293
Query: 456 DIIREVDQDNDGRIDYSEFVAMM 478
VD D+ + Y EFV ++
Sbjct: 294 HQFSVVDVDDSKSLSYQEFVMLV 316
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 59.6 bits (143), Expect = 2e-10
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 350 EMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408
++ D D SG ++ EE++K L+ + + D+D+S ++ Y EF+ +
Sbjct: 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV 316
Query: 409 LHL 411
L +
Sbjct: 317 LLM 319
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 72.8 bits (177), Expect = 1e-15
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 329 PPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGL 387
P G A + + + L +F+ +D D SG I+ EL++ L + +
Sbjct: 2 GPGGGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSI 61
Query: 388 MQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF 447
+ D +N +++ EF + F +D+D SG I +EL+ A F
Sbjct: 62 ISMFDRENKAGVNFSEF------TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGF 115
Query: 448 GL--DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
G D + +IR+ D+ G+I + +F+ +F+
Sbjct: 116 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFR 159
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.0 bits (123), Expect = 2e-08
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
+F+ D DNSG I ELK+ L G L D D L++ D G + + +FI +
Sbjct: 91 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 150
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYITPDELQ 441
L + F +D D G+I Q
Sbjct: 151 L------QRLTDIFRRYDTDQDGWIQVSYEQ 175
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.3 bits (167), Expect = 4e-15
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 341 SEEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLMDS--EIDGLMQAGDIDNS 396
+++ A LK +F+ + ++ EELK+ +Q +L+ +D L Q D +
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 397 GTMDYGEFIAAMLHLNK 413
G + + EF + +++
Sbjct: 62 GEVSFEEFQVLVKKISQ 78
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 63.7 bits (155), Expect = 1e-13
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 415 QREDHMYAAFSYFD--KDGSGYITPDELQTACQQFGL----DDTQLEDIIREVDQDNDGR 468
+ + + F + + ++ +EL+ Q L+D+ +E+D++ DG
Sbjct: 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63
Query: 469 IDYSEFVAMMQ 479
+ + EF +++
Sbjct: 64 VSFEEFQVLVK 74
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 66.4 bits (162), Expect = 2e-14
Identities = 11/80 (13%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 407 AMLHLNKIQRE-DHMYAAF-SYFDKDG-SGYITPDELQTACQQFGL----DDTQLEDIIR 459
A L +++ + + F ++ ++G ++ +E + Q D L++ ++
Sbjct: 2 AAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMK 61
Query: 460 EVDQDNDGRIDYSEFVAMMQ 479
+D + D + ++E+ ++
Sbjct: 62 SLDVNQDSELKFNEYWRLIG 81
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 57.6 bits (139), Expect = 3e-11
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 337 AESLS--EEEIAGLKEMF-KMIDTD-NSGYITLEELKKGLQRVGANLMDS--EIDGLMQA 390
AE L+ EE I + F + +++ E K+ + + +L+ +D M++
Sbjct: 3 AEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKS 62
Query: 391 GDIDNSGTMDYGEFIAAMLHLNKIQRED 418
D++ + + E+ + L K R+
Sbjct: 63 LDVNQDSELKFNEYWRLIGELAKEIRKK 90
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.5 bits (167), Expect = 3e-14
Identities = 14/144 (9%), Positives = 39/144 (27%), Gaps = 21/144 (14%)
Query: 354 MIDTDNSGYITLEELKKGLQRVGANLMDS--EIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411
+ ++ G I ++ + + + D N + +
Sbjct: 15 KMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYK--SFLM 72
Query: 412 NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG------------LDDTQLEDIIR 459
+ R + + F+ + Y+T + L Q Q++ +I
Sbjct: 73 SLCPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLID 131
Query: 460 EVDQD----NDGRIDYSEFVAMMQ 479
+ + G++ V +
Sbjct: 132 KYEPSGINAQRGQLSPEGMVWFLC 155
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (93), Expect = 2e-04
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 14/76 (18%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE--------------IDGLMQAGDI 393
+ E+F Y+T E L K + + + + ID +G
Sbjct: 80 IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGIN 139
Query: 394 DNSGTMDYGEFIAAML 409
G + + +
Sbjct: 140 AQRGQLSPEGMVWFLC 155
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.6 bits (157), Expect = 6e-14
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 414 IQREDHMYAAFSYFDKD--GSGYITPDELQTACQQFGL----DDTQLEDIIREVDQDNDG 467
++ + + AF F I+ +EL+ Q G + L+++I EVD++ DG
Sbjct: 1 MKSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDG 60
Query: 468 RIDYSEFVAMMQ 479
+ + EF+ MM+
Sbjct: 61 EVSFEEFLVMMK 72
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.6 bits (144), Expect = 4e-12
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 341 SEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDS--EIDGLMQAGDIDNS 396
S EE +K F++ + I+ EELK +Q +G +L+ +D +++ D +
Sbjct: 3 SPEE---IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGD 59
Query: 397 GTMDYGEFIAAMLHLNK 413
G + + EF+ M +++
Sbjct: 60 GEVSFEEFLVMMKKISQ 76
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.7 bits (157), Expect = 1e-13
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 409 LHLNKIQREDHMY-AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDG 467
L L ++ + +Y + + +G + + ++ GL D L I D D G
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKG 60
Query: 468 RIDYSEFVAMMQ 479
+ EF ++
Sbjct: 61 VLSKQEFFVALR 72
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.0 bits (106), Expect = 9e-07
Identities = 11/73 (15%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDN 395
++ + ++ ++ ++ N+G + + L++ G D + + D D
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGL--PDLILGKIWDLADTDG 58
Query: 396 SGTMDYGEFIAAM 408
G + EF A+
Sbjct: 59 KGVLSKQEFFVAL 71
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 65.8 bits (159), Expect = 3e-13
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNS 396
A +++ + L E F+ +DTD SG I++ EL L G + + L+ D ++S
Sbjct: 11 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68
Query: 397 GTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQL 454
G + + + M F D G G + +E++ A G + +
Sbjct: 69 GEITF------DEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTF 122
Query: 455 EDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVFK 489
+ ++R+ D+ G + + ++V + + VF
Sbjct: 123 QALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFA 157
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 47.3 bits (111), Expect = 6e-07
Identities = 14/86 (16%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 351 MFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410
F+ D+ G + E++ L G + + LM+ D G++ + +++ +
Sbjct: 89 GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 148
Query: 411 LNKIQREDHMYAAFSYFDKDGSGYIT 436
+ +++ F+++D++ +G +T
Sbjct: 149 VCRVRN------VFAFYDRERTGQVT 168
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 63.0 bits (153), Expect = 3e-13
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
Query: 418 DHMYAAF-SYFDKDGSGY-ITPDELQTACQQFGL-------DDTQLEDIIREVDQDNDGR 468
D M + F Y K+G + + EL+ + D+ + ++ +D + D
Sbjct: 9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNE 68
Query: 469 IDYSEFVAMMQ 479
+D+ E+ +
Sbjct: 69 VDFQEYCVFLS 79
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 58.3 bits (141), Expect = 1e-11
Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 342 EEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDID 394
E+ + + F + + ELK+ L R + + ++ LM D +
Sbjct: 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 64
Query: 395 NSGTMDYGEFIAAMLHLNKIQRE 417
+D+ E+ + + + E
Sbjct: 65 RDNEVDFQEYCVFLSCIAMMCNE 87
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.2 bits (148), Expect = 6e-13
Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFV 475
+ AF FDK+ +G ++ +L+ G L D +++++++ V+ D++G IDY +F+
Sbjct: 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.4 bits (146), Expect = 1e-12
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFI 405
+ F++ D +++G +++ +L+ L +G L D+E+D L++ ++D++G +DY +FI
Sbjct: 3 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 61.8 bits (150), Expect = 9e-13
Identities = 10/67 (14%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 418 DHMYAAF-SYFDKDGSGYI-TPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYS 472
+ + + Y G+ + D+L+ + + + +E+D + DG +++
Sbjct: 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQ 69
Query: 473 EFVAMMQ 479
EF+ ++
Sbjct: 70 EFLILVI 76
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 52.1 bits (125), Expect = 2e-09
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 342 EEEIAGLKEMF-KMIDTDNSGYI-TLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGT 398
E+ + + +++ K + + ++LKK L+ + D + DI+ G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 399 MDYGEFIAAMLHLNKIQRED 418
+++ EF+ ++ + +
Sbjct: 66 VNFQEFLILVIKMGVAAHKK 85
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.7 bits (149), Expect = 9e-13
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 405 IAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVD 462
I A LH + F FD + I+ +E + C + L D Q + + E+
Sbjct: 7 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 66
Query: 463 QDNDGRIDYSEFVAMM 478
+ GR+ Y +F++
Sbjct: 67 VNAKGRLKYPDFLSRF 82
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 6e-11
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAA 407
+ + F+ DT + I+ EE + R L D + D L ++ G + Y +F++
Sbjct: 22 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 81
Query: 408 M 408
Sbjct: 82 F 82
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 61.5 bits (149), Expect = 1e-12
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 418 DHMYAAF-SYFDKDG-SGYITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDGR 468
+ + F ++ K+G ++ EL+ Q D ++ I++E+D++ DG
Sbjct: 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGE 68
Query: 469 IDYSEFVAMM 478
+D+ EFV ++
Sbjct: 69 VDFQEFVVLV 78
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 56.5 bits (136), Expect = 8e-11
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 15/99 (15%)
Query: 339 SLSEEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAG 391
S E + L +F + ++ +ELK LQ ++ + +D +M+
Sbjct: 2 SELETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKEL 61
Query: 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKD 430
D + G +D+ EF+ + L A ++F ++
Sbjct: 62 DENGDGEVDFQEFVVLVAALTV--------ACNNFFWEN 92
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 60.6 bits (147), Expect = 2e-12
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Query: 426 YFDKDGSGY-ITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
Y + G Y + EL+ Q+ + + +D + D +D+ E+V
Sbjct: 18 YAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRS 77
Query: 478 MQ 479
+
Sbjct: 78 LA 79
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 48.3 bits (115), Expect = 6e-08
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
Query: 342 EEEIAGLKEMF-KMIDTDNSGY-ITLEELKKGLQRVGANLM-----DSEIDGLMQAGDID 394
E+ +A + F + Y + ELK+ LQ+ A + + + M D +
Sbjct: 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 64
Query: 395 NSGTMDYGEFIAAMLHL 411
+D+ E++ ++ L
Sbjct: 65 KDCEVDFVEYVRSLACL 81
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (145), Expect = 4e-12
Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 25/89 (28%)
Query: 416 REDHMY-------AAFSYFDKDGSGYITPDELQTACQQFGLDDT---------------- 452
D + F D + G + EL+ +
Sbjct: 7 ELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEER 66
Query: 453 --QLEDIIREVDQDNDGRIDYSEFVAMMQ 479
E +++ VD + D + EF+A Q
Sbjct: 67 LRMREHVMKNVDTNQDRLVTLEEFLASTQ 95
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.5 bits (141), Expect = 2e-11
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 17/87 (19%)
Query: 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSE-------------- 383
+ L K F + D ++ G + +EL+ + + D +
Sbjct: 9 DGLDPNRFN-PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 67
Query: 384 --IDGLMQAGDIDNSGTMDYGEFIAAM 408
+ +M+ D + + EF+A+
Sbjct: 68 RMREHVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.4 bits (81), Expect = 0.002
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374
+ + K +DT+ +TLEE QR
Sbjct: 70 REHVMKNVDTNQDRLVTLEEFLASTQR 96
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.7 bits (144), Expect = 7e-12
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F DKD G+++ E++ + GL T L I D + G++ +F
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (130), Expect = 4e-10
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+S E A E+F D D G+++ E+++ + L + + + D + G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGKL 61
Query: 400 DYGEFIAAMLHLNKIQREDH 419
+F A +++ +
Sbjct: 62 SKDQFALAFHLISQKLIKGI 81
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 58.3 bits (141), Expect = 1e-11
Identities = 12/68 (17%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 418 DHMYAAF-SYFDKDGSGY-ITPDELQTA-----CQQFGLDDTQLEDIIREVDQDNDGRID 470
+ A F Y ++G + ++ EL+ L D ++ ++ ++D++ D ++
Sbjct: 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVN 68
Query: 471 YSEFVAMM 478
+ E+V +
Sbjct: 69 FQEYVTFL 76
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 42.9 bits (101), Expect = 3e-06
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 342 EEEIAGLKEMF-KMIDTDNSGY-ITLEELKKGLQRVGANLMD---SEIDGLMQAGDIDNS 396
++ I L +F K + + ++ +ELK+ +Q+ +EI LM+ D +
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 397 GTMDYGEFIAAMLHL 411
+++ E++ + L
Sbjct: 65 QEVNFQEYVTFLGAL 79
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 57.7 bits (139), Expect = 3e-11
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDG 467
+ M F F D GY+T ++L+ ++ D ++ I++++DQ DG
Sbjct: 6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDG 64
Query: 468 RIDYSEFVAMM 478
++ + F +++
Sbjct: 65 KVGFQSFFSLI 75
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 54.6 bits (131), Expect = 4e-10
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDI 393
S E + + F D GY+T E+L+ +++ + +D +M+ D
Sbjct: 2 SQMEHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ 60
Query: 394 DNSGTMDYGEFIAAMLHLNKIQRE 417
G + + F + + L +
Sbjct: 61 CRDGKVGFQSFFSLIAGLTIACND 84
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 55.8 bits (134), Expect = 1e-10
Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-------DSEIDGLMQ 389
+ + +E I G+ +MF I L ++ N + + + + +
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 390 AGDIDNSGTMDYGEFIAAMLHLNKIQRE 417
D + +D+ EF++ + + +
Sbjct: 60 KKDKNEDKKIDFSEFLSLLGDIATDYHK 87
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 51.5 bits (123), Expect = 5e-09
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 11/75 (14%)
Query: 415 QREDHMYAAFSYFDK--DGSGYITPDELQTACQQFG---------LDDTQLEDIIREVDQ 463
Q E + F K I L T ++ L D+ + D+
Sbjct: 4 QAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK 63
Query: 464 DNDGRIDYSEFVAMM 478
+ D +ID+SEF++++
Sbjct: 64 NEDKKIDFSEFLSLL 78
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 2e-10
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
A F +G+++ D+++ L L + D D+DG +D EF M
Sbjct: 14 AIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (132), Expect = 2e-10
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
+ E+ A +F + +G+++ +++K L L + + + DID+ G +
Sbjct: 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGML 60
Query: 400 DYGEFIAAMLHLNKIQREDH 419
D EF AM L E
Sbjct: 61 DRDEFAVAM-FLVYCALEKE 79
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.7 bits (131), Expect = 3e-10
Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 413 KIQREDHMY--AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRID 470
KI E Y F D +G+I + + L +L I D D DG +
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALT 61
Query: 471 YSEFVAMM 478
EF A
Sbjct: 62 LDEFCAAF 69
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 53.5 bits (128), Expect = 7e-10
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGT 398
+++E+ FK I D +G+I K+ + + L E+ + + D D G
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGA 59
Query: 399 MDYGEFIAAMLHLNKIQREDH 419
+ EF AA HL ++ +
Sbjct: 60 LTLDEFCAAF-HLVVARKNGY 79
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 50.5 bits (121), Expect = 7e-09
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 418 DHMYAAF-SYFDKDGSGY-ITPDELQ----TACQQFG---LDDTQLEDIIREVDQDNDGR 468
+ + F Y + G ++ EL+ D +++I + +D + D +
Sbjct: 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQ 67
Query: 469 IDYSEFVAMMQ 479
+D+ EF++++
Sbjct: 68 VDFQEFISLVA 78
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 44.8 bits (106), Expect = 8e-07
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 342 EEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLM-----DSEIDGLMQAGDID 394
EE + G+ +F + ++ ELK+ L + AN + + ID + Q D +
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 395 NSGTMDYGEFIAAM 408
+D+ EFI+ +
Sbjct: 64 QDEQVDFQEFISLV 77
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.8 bits (121), Expect = 1e-08
Identities = 14/57 (24%), Positives = 20/57 (35%)
Query: 422 AAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
F D S +I+ + + L +L I D D DG + EF A
Sbjct: 26 NQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAF 82
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 9e-08
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTM 399
++EE+ F+ + D S +I+ K + + L E+ + + D D G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73
Query: 400 DYGEFIAAMLHLNKIQREDH 419
EF AA HL ++ +
Sbjct: 74 TLPEFCAAF-HLIVARKNGY 92
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 42.2 bits (100), Expect = 2e-06
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448
E+ + AF FDKDG+GYI+ EL+ G
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 33
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 41.0 bits (97), Expect = 5e-06
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376
SEEEI +E F++ D D +GYI+ EL+ + +G
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLG 33
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Score = 42.5 bits (99), Expect = 8e-05
Identities = 17/147 (11%), Positives = 42/147 (28%), Gaps = 4/147 (2%)
Query: 134 RKLGQGQFGTTFLCVEKATQKEFACK----SIAKRKLTTEEDVEDVRREIRIMHHLAGHP 189
+++G G F ++ + K + ++ R E + H
Sbjct: 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV 91
Query: 190 NVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG 249
+ Y D VME + ++ + + G + + + +
Sbjct: 92 PHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYA 151
Query: 250 VMHRDLKPENFLFINQQEEAPLKTIDF 276
+ + K F N + + + F
Sbjct: 152 LEPKVKKQLVKQFTNPELCDITERLVF 178
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Score = 37.0 bits (86), Expect = 4e-04
Identities = 9/41 (21%), Positives = 24/41 (58%)
Query: 438 DELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478
+LQ ++ ++ +E I+ ++D + D ++ + EF+ +M
Sbjct: 40 KDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM 80
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 35.5 bits (82), Expect = 0.002
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 426 YFDKDGSGY-ITPDEL----QTACQQF---GLDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
+ +DG+ I+ E T F D L+ +++++D D+DG++D+ EF+ +
Sbjct: 18 HAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNL 77
Query: 478 M 478
+
Sbjct: 78 I 78
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 34.7 bits (80), Expect = 0.003
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 426 YFDKDG-SGYITPDEL----QTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAM 477
Y ++G + EL F + ++ ++ +D D DG D+ EF+A
Sbjct: 18 YSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAF 77
Query: 478 M 478
+
Sbjct: 78 V 78
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 489 | |||
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.98 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.94 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.92 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.91 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.91 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.9 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.89 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.89 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.89 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.88 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.88 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.87 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.87 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.86 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.86 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.86 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.84 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.84 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.84 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.83 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.82 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.82 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.81 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.81 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.81 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.8 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.79 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.79 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.78 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.78 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.78 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.77 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.76 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.76 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.76 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.75 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.75 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.75 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.75 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.69 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.68 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.63 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.54 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.54 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.53 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.51 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.49 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.48 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.47 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.47 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.46 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.46 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.46 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.46 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.45 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.45 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.45 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.44 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.44 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.44 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.43 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.42 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.42 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.42 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.41 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.4 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.38 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.37 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.36 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.35 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.35 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.33 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.32 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.31 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.3 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.28 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.28 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.27 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.26 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.24 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.23 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.22 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.18 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.18 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 99.17 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.15 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 99.14 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 99.14 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.14 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 99.13 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 99.13 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 99.12 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 99.12 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.12 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.1 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.08 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.08 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.08 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.08 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.08 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.08 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 99.07 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.06 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 99.06 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 99.04 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.03 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.03 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.02 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.01 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.01 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.01 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 99.01 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.01 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 99.0 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 98.96 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 98.95 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.95 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.94 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.93 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.92 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.92 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.92 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.92 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 98.91 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.91 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.86 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.84 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.82 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.82 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.82 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.81 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.8 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.79 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.79 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.79 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.77 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.73 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.73 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.73 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.7 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.7 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.69 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.68 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.68 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.66 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.61 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.56 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.56 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.53 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.5 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.45 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.43 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.31 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.29 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.29 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.28 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.09 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.09 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.07 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.03 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.88 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.84 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.69 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 97.35 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.29 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.26 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.18 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 96.5 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 95.52 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 95.42 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.0 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 94.67 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 92.64 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 92.12 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 90.64 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 88.24 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 87.75 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 86.98 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 86.3 | |
| d1wlma1 | 138 | Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090 | 84.37 | |
| d1wlma1 | 138 | Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090 | 83.5 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 83.33 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 83.3 | |
| d1eg3a2 | 97 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 80.65 |
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-41 Score=318.54 Aligned_cols=235 Identities=24% Similarity=0.404 Sum_probs=182.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+++|+++ +|||||++++++.+.+.+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEEEE
Confidence 4699999999999999999999999999999999765433333456788999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.......
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~~kl~DFG~a~~~~~~~~ 161 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSRR 161 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCSCSCCCCCCC
T ss_pred EeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee---cCCCCEeecccceeeecCCCcc
Confidence 9999999999999988999999999999999999999999999999999999999 6778999999999988766554
Q ss_pred eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHHHh
Q 040003 288 FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEMFK 353 (489)
Q Consensus 288 ~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~F~ 353 (489)
.....+..| ++. -++.++++.+++.|..+|......... .+.+ ....++..++++-.+.+. +
T Consensus 162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~---~ 237 (263)
T d2j4za1 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTEGARDLIS---R 237 (263)
T ss_dssp EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-TCCCCCTTSCHHHHHHHH---H
T ss_pred cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCccCCHHHHHHHH---H
Confidence 443344344 222 235578888888888877643211000 0000 000112234444333333 5
Q ss_pred hhcCCCCCCccHHHHHH
Q 040003 354 MIDTDNSGYITLEELKK 370 (489)
Q Consensus 354 ~~D~d~~g~i~~~el~~ 370 (489)
++..|++.|++.+|+.+
T Consensus 238 ~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 238 LLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HTCSSGGGSCCHHHHHT
T ss_pred HccCCHhHCcCHHHHHc
Confidence 67888888899888754
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.1e-41 Score=325.77 Aligned_cols=242 Identities=28% Similarity=0.445 Sum_probs=169.3
Q ss_pred ccCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 123 TGNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 123 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
..++.+.|++++.||+|+||+||+|+++.+++.||||++.+.... .....+.+|+.+|++| +|||||+++++|.+.+
T Consensus 4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 80 (307)
T d1a06a_ 4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKI-KHPNIVALDDIYESGG 80 (307)
T ss_dssp CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECC
Confidence 345678899999999999999999999999999999999865432 2345688999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 203 AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
.+|||||||+||+|.+++...+.+++..+..++.||+.||+|||++|||||||||+|||+...+.++.+||+|||+|+..
T Consensus 81 ~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 81 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999999999999998889999999999999999999999999999999999999976566789999999999877
Q ss_pred CCCCceee-eeeccC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCC-CC-C--CCcchhhhhhccHHH
Q 040003 283 RPGLTFRV-WLRLHF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKV-AV-P--PIGDRVIAESLSEEE 344 (489)
Q Consensus 283 ~~~~~~~~-~~~~~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~~~~~ 344 (489)
..+..... +++..| ++.. ++.++++.+++.|..+|.+....... .+ . ..........++++-
T Consensus 161 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 240 (307)
T d1a06a_ 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 240 (307)
T ss_dssp ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred cCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHH
Confidence 65443222 233333 2221 23466667777777666543211100 00 0 000000112344444
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+.+. +++..|++.|++.+|+..
T Consensus 241 ~~li~---~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 241 KDFIR---HLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp HHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred HHHHH---HHccCCHhHCcCHHHHhc
Confidence 44444 568889999999998754
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-41 Score=321.36 Aligned_cols=235 Identities=28% Similarity=0.378 Sum_probs=179.7
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|+++++||+|+||+||+|+++.+|+.||||++.+... ....+.+.+|+++|++| +|||||++++++.+.+.+|
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~ 79 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 79 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeE
Confidence 34679999999999999999999999999999999976532 23346789999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 80 ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl---~~~~~~KL~DFG~a~~~~~~ 156 (271)
T d1nvra_ 80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 156 (271)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE---CCCCCEEEccchhheeeccC
Confidence 999999999999999877889999999999999999999999999999999999999 67788999999999987543
Q ss_pred Cce----eeeeeccC---------CCC-----cchhHHHHHHHhcccccCCCCCCCCCC--CC-CCCcchhhhhhccHHH
Q 040003 286 LTF----RVWLRLHF---------LFF-----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AV-PPIGDRVIAESLSEEE 344 (489)
Q Consensus 286 ~~~----~~~~~~~y---------pf~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 344 (489)
... ..+++..| ++. -++.+.++.+++.|..+|......... .. ...........++.+-
T Consensus 157 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 236 (271)
T d1nvra_ 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 236 (271)
T ss_dssp TEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred CccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHH
Confidence 321 11333333 222 245688999999999988654321110 00 0000011112344444
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.+.+. +++..|++.|++++|+.
T Consensus 237 ~~li~---~~L~~dP~~R~t~~eil 258 (271)
T d1nvra_ 237 LALLH---KILVENPSARITIPDIK 258 (271)
T ss_dssp HHHHH---HHSCSSTTTSCCHHHHT
T ss_pred HHHHH---HHcCCChhHCcCHHHHh
Confidence 44443 57888999999998863
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-41 Score=322.85 Aligned_cols=234 Identities=24% Similarity=0.319 Sum_probs=173.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+++|++| +|||||+++++|.+.+.+|||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEEEE
Confidence 4599999999999999999999999999999999765433334457789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++...+.+++..++.++.|++.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.....
T Consensus 87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 7788999999999998753321
Q ss_pred ee----eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 288 FR----VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 288 ~~----~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
.. .+++..| ++. -++.++++.+++.|..+|......... .+.+ ....+...++++-.+.++
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~ 242 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPEKFFPKARDLVE 242 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHT-TCCCCCTTCCHHHHHHHH
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHc-CCCCCCccCCHHHHHHHH
Confidence 11 1222222 221 124466666666666666532110000 0000 000011233443333333
Q ss_pred HHHhhhcCCCCCCccHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~ 369 (489)
+++..|++.|++.+|+.
T Consensus 243 ---~~L~~dP~~R~t~~e~~ 259 (288)
T d1uu3a_ 243 ---KLLVLDATKRLGCEEME 259 (288)
T ss_dssp ---TTSCSSGGGSTTSGGGT
T ss_pred ---HHccCCHhHCcCHHHHc
Confidence 56778888888887753
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.3e-40 Score=313.01 Aligned_cols=237 Identities=26% Similarity=0.324 Sum_probs=181.5
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCC------HHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTT------EEDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~------~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
.++|++++.||+|+||+||+|+++.+++.||||++.+..... ....+.+.+|+.+|++|..|||||+++++|.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 467999999999999999999999999999999998765432 12345688999999999559999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+.+|||||||+||+|.+++..++.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999 778899999999999
Q ss_pred ccCCCCceee-eeeccC---------------C----CCcchhHHHHHHHhcccccCCCCCCCCCC--CC--CCCcchhh
Q 040003 281 FFRPGLTFRV-WLRLHF---------------L----FFQKQRQSVLQTRLVRNLNEPGSLWPDKV--AV--PPIGDRVI 336 (489)
Q Consensus 281 ~~~~~~~~~~-~~~~~y---------------p----f~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~--~~~~~~~~ 336 (489)
.+..+..... ..+..| + .+.++.+.++.+++.|..+|......... .. ........
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 238 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 238 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence 8765433222 222222 1 11234477777777777777654311100 00 00000011
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
...++++-.+.++ ++++.|++.|++.+|+.
T Consensus 239 ~~~~s~~~~~li~---~~L~~~p~~R~s~~eil 268 (277)
T d1phka_ 239 WDDYSDTVKDLVS---RFLVVQPQKRYTAEEAL 268 (277)
T ss_dssp GGGSCHHHHHHHH---HHCCSSGGGSCCHHHHT
T ss_pred cccCCHHHHHHHH---HHccCChhHCcCHHHHH
Confidence 1245554444443 67889999999988864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3.4e-40 Score=324.22 Aligned_cols=224 Identities=29% Similarity=0.452 Sum_probs=174.3
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
+.+.+.|++++.||+|+||+||+|+++.+|+.||||++.+. .......+.+|+++|++| +|||||+++++|.+.+.
T Consensus 25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~ 100 (352)
T d1koba_ 25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYE 100 (352)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSE
T ss_pred CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCc---chhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence 34456799999999999999999999999999999999754 244557788999999999 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccccc
Q 040003 204 VHVVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFF 282 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~ 282 (489)
+|||||||+||+|.+++...+ .+++.+++.++.||+.||.|||++|||||||||+||||.. ...+.+||+|||+|+.+
T Consensus 101 ~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~~ 179 (352)
T d1koba_ 101 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKL 179 (352)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEEC
T ss_pred EEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeecccceec
Confidence 999999999999998876554 6999999999999999999999999999999999999943 24678999999999988
Q ss_pred CCCCceee---------------------------------eeeccCCCCcchhHHHHHHHhcccccCCCCCCCCCCCCC
Q 040003 283 RPGLTFRV---------------------------------WLRLHFLFFQKQRQSVLQTRLVRNLNEPGSLWPDKVAVP 329 (489)
Q Consensus 283 ~~~~~~~~---------------------------------~~~~~ypf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 329 (489)
........ ++++.+||.+.+...++..|..+.+.++...|+
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~------ 253 (352)
T d1koba_ 180 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS------ 253 (352)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTT------
T ss_pred CCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccc------
Confidence 76554332 122233444444444444444444443333322
Q ss_pred CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 330 PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.++.+-.+.+. .++..|++.|++.+|+..
T Consensus 254 ---------~~s~~~~~li~---~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 254 ---------SVSPEAKDFIK---NLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp ---------TSCHHHHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred ---------CCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 23444333333 778899999999998754
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-40 Score=317.31 Aligned_cols=243 Identities=29% Similarity=0.420 Sum_probs=182.3
Q ss_pred cCcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH---HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe
Q 040003 124 GNLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE---EDVEDVRREIRIMHHLAGHPNVIQIVGAYED 200 (489)
Q Consensus 124 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 200 (489)
.++.+.|++++.||+|+||+||+|+++.+|+.||||++.+...... ...+.+.+|+.+|++| +|||||+++++|.+
T Consensus 6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~ 84 (293)
T d1jksa_ 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN 84 (293)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence 4567789999999999999999999999999999999986544322 2357889999999999 89999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCC-CCCCeEEEeeccc
Q 040003 201 AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQ-EEAPLKTIDFGLS 279 (489)
Q Consensus 201 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~-~~~~~kl~DFGla 279 (489)
...+|||||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+...+ ....+||+|||+|
T Consensus 85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence 999999999999999999999888999999999999999999999999999999999999995432 2336999999999
Q ss_pred cccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC----CCCCCcchhhhhhcc
Q 040003 280 MFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV----AVPPIGDRVIAESLS 341 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 341 (489)
+.+..+..... ..+..| ++. -++.+.++.+++.|..+|.+....... .............++
T Consensus 165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (293)
T d1jksa_ 165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244 (293)
T ss_dssp EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC
Confidence 98765443322 222222 111 234577777777777777543210000 000000111122344
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+-.+.++ +++..|++.|++.+|+..
T Consensus 245 ~~~~~li~---~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 245 ALAKDFIR---RLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 43333333 678899999999988743
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-40 Score=320.44 Aligned_cols=236 Identities=21% Similarity=0.364 Sum_probs=175.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+-++|++++.||+|+||+||+|+++.+++.||||++.+.. .+...+.+|+++|+.+ +|||||+++++|.+.+.+|
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ 77 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEELV 77 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEE
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE
Confidence 4567999999999999999999999999999999997542 3345688999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||||.||+|.+++...+ .+++.+++.++.||+.||+|||++|||||||||+|||+.. +....+||+|||+++....
T Consensus 78 lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECCT
T ss_pred EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CCceEEEEcccchhhcccc
Confidence 9999999999999997665 7999999999999999999999999999999999999944 2456899999999998866
Q ss_pred CCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| ++ +-++.++++.+++.|..+|......... .+ ...........++.+-.+
T Consensus 157 ~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T d1tkia_ 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred CCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHH
Confidence 554332 112222 11 1234466666666666666543210000 00 000000111123444333
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+. +++..|++.|++.+|+..
T Consensus 237 li~---~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 237 FVD---RLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHH---HHccCChhHCcCHHHHhc
Confidence 333 678899999999999864
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-39 Score=312.59 Aligned_cols=234 Identities=24% Similarity=0.246 Sum_probs=179.2
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
++.++|++.++||+|+||+||+|+++.+|+.||||++....... .+.+.+|+++|+++ +|||||+++++|.+.+.+
T Consensus 17 dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~ 92 (293)
T d1yhwa1 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMREN-KNPNIVNYLDSYLVGDEL 92 (293)
T ss_dssp CTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred CcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChH---HHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEE
Confidence 44567999999999999999999999999999999997654332 46789999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||||+||+|.+++.+ +.+++..++.+++||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 93 ~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 93 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 168 (293)
T ss_dssp EEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE---CCCCcEeeccchhheeecc
Confidence 999999999999987654 579999999999999999999999999999999999999 6778999999999998765
Q ss_pred CCceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC--CCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV--PPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ 346 (489)
...... +.+..| ++. -++.+.++.+++.|..+|.+....... .+ ...........++.+-.+
T Consensus 169 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 248 (293)
T d1yhwa1 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248 (293)
T ss_dssp TTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHH
T ss_pred ccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHH
Confidence 433222 233333 222 235588899999998888643210000 00 000000112234444444
Q ss_pred HHHHHHhhhcCCCCCCccHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
.+. ++++.|++.|++.+|+.
T Consensus 249 li~---~~L~~dP~~R~s~~eil 268 (293)
T d1yhwa1 249 FLN---RCLDMDVEKRGSAKELL 268 (293)
T ss_dssp HHH---HHTCSSTTTSCCHHHHT
T ss_pred HHH---HHccCChhHCcCHHHHh
Confidence 443 56888888899888864
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1e-39 Score=320.53 Aligned_cols=237 Identities=27% Similarity=0.381 Sum_probs=177.1
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+. .....+.+.+|+.+|++| +|||||+++++|.+.+.+|
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~---~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ 99 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMV 99 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC---SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTEEE
T ss_pred CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc---chhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence 346799999999999999999999999999999999653 345567899999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||||+||+|.+++.. .+.+++..++.++.||+.||+|||++|||||||||+|||+.. +.++.+||+|||+|+.+..
T Consensus 100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTSCCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCCCeEEEeecchheeccc
Confidence 99999999999999854 467999999999999999999999999999999999999954 2357899999999998765
Q ss_pred CCceee-eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC---CCCcchhhhhhccHHHHH
Q 040003 285 GLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV---PPIGDRVIAESLSEEEIA 346 (489)
Q Consensus 285 ~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~ 346 (489)
...... ..+..| ++. -++.++++.+++.|..+|.+..-.... .+ ...........++++-.+
T Consensus 179 ~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 258 (350)
T d1koaa2 179 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 258 (350)
T ss_dssp TSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHH
T ss_pred ccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 544332 222222 121 123466666666666666532110000 00 000000111234444444
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.++ +++..|++.|++.+|+..
T Consensus 259 li~---~~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 259 FIR---KLLLADPNTRMTIHQALE 279 (350)
T ss_dssp HHH---HHCCSSGGGSCCHHHHHH
T ss_pred HHH---HHccCChhHCcCHHHHhc
Confidence 443 667889999999998754
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6e-40 Score=316.84 Aligned_cols=236 Identities=21% Similarity=0.220 Sum_probs=183.0
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.+.|+++++||+|+||+||+|+++.+++.||||++.+.........+.+.+|+++|++| +|||||+++++|.+.+.+|
T Consensus 13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ 91 (309)
T d1u5ra_ 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW 91 (309)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE
T ss_pred cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEEE
Confidence 445699999999999999999999999999999999877666666778899999999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||||.+|+|..++..++.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 92 iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~~Kl~DFG~a~~~~~~ 168 (309)
T d1u5ra_ 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA 168 (309)
T ss_dssp EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSSB
T ss_pred EEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---CCCCCEEEeecccccccCCC
Confidence 999999999998877778899999999999999999999999999999999999999 66788999999999977544
Q ss_pred CceeeeeeccC------------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRVWLRLHF------------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~~~~~~y------------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 347 (489)
... .++..| +| +-++.++++.+++.|..+|.+....... .............++++-.+.
T Consensus 169 ~~~--~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~l 246 (309)
T d1u5ra_ 169 NSF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246 (309)
T ss_dssp CCC--CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHH
T ss_pred Ccc--ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence 332 122222 12 2245688888999888877643210000 000000001112334443333
Q ss_pred HHHHHhhhcCCCCCCccHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+. .++..|++.|++++|+..
T Consensus 247 i~---~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 247 VD---SCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp HH---HHTCSSGGGSCCHHHHTT
T ss_pred HH---HHCcCChhHCcCHHHHHh
Confidence 33 568889999999998753
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-40 Score=319.53 Aligned_cols=230 Identities=23% Similarity=0.274 Sum_probs=176.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++ +|||||+++++|.+...+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeeccccccccc
Confidence 4599999999999999999999999999999999865433334567789999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.......
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 7788999999999997654322
Q ss_pred e--eeeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHHHHHHH
Q 040003 288 F--RVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAGLKEMF 352 (489)
Q Consensus 288 ~--~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 352 (489)
. ..+++..| +|. .++.++++.+++.|..+|...................+..++++-.+.++
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~--- 237 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA--- 237 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH---
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHH---
Confidence 1 12333333 121 23457788888888777765421100000000000112345555444444
Q ss_pred hhhcCCCCCCcc
Q 040003 353 KMIDTDNSGYIT 364 (489)
Q Consensus 353 ~~~D~d~~g~i~ 364 (489)
+++..|+..|++
T Consensus 238 ~~L~~dP~~R~~ 249 (337)
T d1o6la_ 238 GLLKKDPKQRLG 249 (337)
T ss_dssp HHTCSSTTTSTT
T ss_pred hhccCCchhhcc
Confidence 567788888884
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-40 Score=313.37 Aligned_cols=235 Identities=21% Similarity=0.254 Sum_probs=177.9
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
..+.|++++.||+|+||+||+|+++.+++.||+|++.+.. ....+.+.+|+++|++| +|||||++++++.+.+.+|
T Consensus 10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ 85 (288)
T d2jfla1 10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLW 85 (288)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEE
Confidence 4567999999999999999999999999999999997542 34557788999999999 8999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 206 VVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+....
T Consensus 86 lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---~~~~~~Kl~DFG~a~~~~~ 162 (288)
T d2jfla1 86 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTR 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECHH
T ss_pred EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---CCCCCEEEEechhhhccCC
Confidence 999999999999987654 569999999999999999999999999999999999999 6778999999999976532
Q ss_pred CCce--eeeeeccC--------------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CC-C-CCcchhhhhhcc
Q 040003 285 GLTF--RVWLRLHF--------------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AV-P-PIGDRVIAESLS 341 (489)
Q Consensus 285 ~~~~--~~~~~~~y--------------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~ 341 (489)
.... ....+..| +|. -++.++++.+++.|..+|.+....... .+ . ..........++
T Consensus 163 ~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s 242 (288)
T d2jfla1 163 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS 242 (288)
T ss_dssp HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSC
T ss_pred CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCC
Confidence 2110 01111112 222 245578888999998887654221100 00 0 000001122344
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
.+-.+.++ +++..|++.|++.+|+..
T Consensus 243 ~~~~~li~---~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 243 SNFKDFLK---KCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp HHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 44444443 578889999999988743
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-40 Score=320.75 Aligned_cols=188 Identities=20% Similarity=0.270 Sum_probs=162.7
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 206 (489)
.+.|+++++||+|+||+||+|+++.+|+.||+|++++.. .....+.+.+|+.+|+++ +|||||+++++|.+..++||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~i 81 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI 81 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence 356999999999999999999999999999999997643 334457889999999999 89999999999999999999
Q ss_pred EEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||+||+|.+++.+.+.+++..++.++.|++.||.|||+ +|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 82 VmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~ 158 (322)
T d1s9ja_ 82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS 158 (322)
T ss_dssp EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHHH
T ss_pred EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccCCC
Confidence 99999999999999988999999999999999999999997 599999999999999 67889999999999987654
Q ss_pred CceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCCC
Q 040003 286 LTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 286 ~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~ 320 (489)
...+.+.+..| +|. -++.++++.+++.|+.+|...
T Consensus 159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~ 206 (322)
T d1s9ja_ 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206 (322)
T ss_dssp TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 44444444444 232 356789999999999998754
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.3e-39 Score=313.94 Aligned_cols=187 Identities=22% Similarity=0.349 Sum_probs=157.6
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+ +|||||++++++.+.+.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeeeeE
Confidence 4599999999999999999999999999999999765433334467889999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|..++...+.+++..++.++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.......
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~~~ 159 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVTY 159 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSCBC
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccccc
Confidence 9999999999999998999999999999999999999999999999999999999 7788999999999998754332
Q ss_pred eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
+..++..| ++. -++.++++.+++.|..+|.+
T Consensus 160 -~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~ 203 (316)
T d1fota_ 160 -TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 203 (316)
T ss_dssp -CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred -cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC
Confidence 12222222 221 23446777777777777754
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-39 Score=303.61 Aligned_cols=233 Identities=18% Similarity=0.241 Sum_probs=177.2
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe----CCeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----AVAVH 205 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~ 205 (489)
|++.++||+|+||+||+|+++.+++.||+|++..... .....+.+.+|+++|++| +|||||+++++|.+ ...+|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~~~ 88 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV 88 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccCCEEE
Confidence 5778899999999999999999999999999987554 455678899999999999 79999999999875 45689
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLG--VMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
||||||+||+|.+++.+.+.+++..++.++.||+.||+|||+++ ||||||||+|||+. +.++.+||+|||+|+...
T Consensus 89 ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKR 166 (270)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcceecc
Confidence 99999999999999998889999999999999999999999999 99999999999993 236789999999998766
Q ss_pred CCCceeeeeeccC--------CC----CcchhHHHHHHHhcccccCCCCCCCCCC--CC-CCCcchhhhhhccHHHHHHH
Q 040003 284 PGLTFRVWLRLHF--------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV--AV-PPIGDRVIAESLSEEEIAGL 348 (489)
Q Consensus 284 ~~~~~~~~~~~~y--------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l 348 (489)
.......+++..| ++ +-++.++++.+++.|..+|....-.... .+ ............+++-.+.+
T Consensus 167 ~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li 246 (270)
T d1t4ha_ 167 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 246 (270)
T ss_dssp TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred CCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHH
Confidence 5544433333333 11 1235588999999999888643210000 00 00000111222333322222
Q ss_pred HHHHhhhcCCCCCCccHHHHH
Q 040003 349 KEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~ 369 (489)
-+++..|++.|++.+|+.
T Consensus 247 ---~~~l~~dp~~R~s~~ell 264 (270)
T d1t4ha_ 247 ---EGCIRQNKDERYSIKDLL 264 (270)
T ss_dssp ---HHHSCSSGGGSCCHHHHH
T ss_pred ---HHHccCCHhHCcCHHHHh
Confidence 367888888899988874
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.3e-39 Score=305.99 Aligned_cols=240 Identities=19% Similarity=0.213 Sum_probs=179.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++.++||+|+||+||+|+++.+++.||||+++.... ..+++.+|+++|++| +|||||+++++|.+.+.+|||
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~----~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc----hHHHHHHHHHHHHhC-CCCCEecCCccEeeCCeeEEE
Confidence 459999999999999999999999999999999865432 346789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||++|+|.+++... ..+++..+..++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.....
T Consensus 92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~a~~~~~~ 168 (287)
T d1opja_ 92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD 168 (287)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCCTTTCCSS
T ss_pred eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE---CCCCcEEEccccceeecCCC
Confidence 9999999999998764 468999999999999999999999999999999999999 67789999999999987655
Q ss_pred Cceeeeee---ccC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRVWLR---LHF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~~~~---~~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 347 (489)
........ ..| +|.. ++.+.++.+++.+..++....-.... .+.+-...-....++.+-.+.
T Consensus 169 ~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHH
Confidence 44332111 112 2221 24467788887755443221110000 000000011122344433333
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCC
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN 378 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~ 378 (489)
+ -+++..|++.|++++|+...|..+...
T Consensus 249 i---~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 249 M---RACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp H---HHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred H---HHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 3 367899999999999998888876443
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.4e-39 Score=314.99 Aligned_cols=187 Identities=24% Similarity=0.349 Sum_probs=160.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++|+.+ +|||||+++++|.+...+|+|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeecccccccccccccc
Confidence 5699999999999999999999999999999999765433334457789999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||.||+|..++...+.+++..++.++.||+.||.|||++|||||||||+|||| +.++.+||+|||+|+.+.....
T Consensus 120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccccc
Confidence 9999999999999998999999999999999999999999999999999999999 7788999999999998764332
Q ss_pred eeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 288 FRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 288 ~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
...++..| ++. -++.++++.+++.|..+|.+
T Consensus 197 -~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~ 240 (350)
T d1rdqe_ 197 -TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp -CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred -cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC
Confidence 22333333 221 23557788888888887764
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-39 Score=303.03 Aligned_cols=234 Identities=21% Similarity=0.283 Sum_probs=166.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 205 (489)
+.|++++.||+|+||+||+|+++.+|+.||+|++..... .....+.+.+|+++|+++ +|||||++++++.+ ...+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCEEE
Confidence 569999999999999999999999999999999977644 456678899999999999 89999999999865 46689
Q ss_pred EEEeecCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCCEeeeeCCCCCCeEEEee
Q 040003 206 VVMELCAGGELFDRIIQ----RGHYTERKAADLTRIIVGVVEACHSLG-----VMHRDLKPENFLFINQQEEAPLKTIDF 276 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-----iiHrDlKp~Nill~~~~~~~~~kl~DF 276 (489)
||||||+||+|.+++.+ .+.+++..++.++.||+.||+|||++| ||||||||+|||+ +.++.+||+||
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---~~~~~vkl~DF 158 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDF 158 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---CTTSCEEECCH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---CCCCcEEEeec
Confidence 99999999999998864 357999999999999999999999976 9999999999999 67789999999
Q ss_pred ccccccCCCCceee--eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhc
Q 040003 277 GLSMFFRPGLTFRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESL 340 (489)
Q Consensus 277 Gla~~~~~~~~~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (489)
|+|+.+........ ..+..| +|. -++.++++.+++.|..+|....+.+.. .+.......+...+
T Consensus 159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 238 (269)
T d2java1 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 238 (269)
T ss_dssp HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTS
T ss_pred cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccc
Confidence 99998765443222 222233 222 134577888888888777643221100 00000000112234
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELK 369 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~ 369 (489)
+++-.+.+. +++..|++.|++.+|+.
T Consensus 239 s~~l~~li~---~~L~~dp~~Rps~~ell 264 (269)
T d2java1 239 SDELNEIIT---RMLNLKDYHRPSVEEIL 264 (269)
T ss_dssp CHHHHHHHH---HHTCSSGGGSCCHHHHH
T ss_pred CHHHHHHHH---HHcCCChhHCcCHHHHH
Confidence 443333333 56778888888888763
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.9e-38 Score=302.55 Aligned_cols=243 Identities=23% Similarity=0.271 Sum_probs=182.8
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.++|++.+.||+|+||+||+|++..+++.||||++.+.........+.+.+|+++|+.+ +|||||++++++...+
T Consensus 5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~~ 83 (277)
T d1o6ya_ 5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAG 83 (277)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSSS
T ss_pred ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCCC
Confidence 456799999999999999999999999999999999877666777778899999999999 8999999999997654
Q ss_pred -eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 -AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
.+|||||||+|++|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.++|+|||++..
T Consensus 84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll---~~~~~~~l~d~~~~~~ 160 (277)
T d1o6ya_ 84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARA 160 (277)
T ss_dssp EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTSCEEECCCTTCEE
T ss_pred ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc---Cccccceeehhhhhhh
Confidence 489999999999999999888999999999999999999999999999999999999999 6678899999999886
Q ss_pred cCCCCcee-----eeeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CC--CCCcchhhhhh
Q 040003 282 FRPGLTFR-----VWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AV--PPIGDRVIAES 339 (489)
Q Consensus 282 ~~~~~~~~-----~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~ 339 (489)
........ .+.+..| ++. -++.+.++.+++.|..+|....-.... .+ ...........
T Consensus 161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T d1o6ya_ 161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 240 (277)
T ss_dssp CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSS
T ss_pred hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccC
Confidence 64332211 1223333 222 234577888888888877643210000 00 00000111123
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCc-cHHHHHHHHHHh
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYI-TLEELKKGLQRV 375 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i-~~~el~~~l~~l 375 (489)
++++-.+.+. +++..|++.|+ +.+||...|.++
T Consensus 241 ~s~~l~~li~---~~L~~dp~~R~~sa~~l~~~l~r~ 274 (277)
T d1o6ya_ 241 LSADLDAVVL---KALAKNPENRYQTAAEMRADLVRV 274 (277)
T ss_dssp CCHHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHH---HHccCCHhHCHhHHHHHHHHHHHH
Confidence 4444444444 66888999998 889988877654
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9e-39 Score=315.63 Aligned_cols=235 Identities=21% Similarity=0.268 Sum_probs=180.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHH---HHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRRE---IRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E---~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|+++++||+|+||+||+|+++.+|+.||||++.+...........+.+| +.+++.+ +|||||+++++|.+.+.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCEE
Confidence 459999999999999999999999999999999976443222222334444 5566666 799999999999999999
Q ss_pred EEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 205 HVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+..
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecCC
Confidence 9999999999999999998999999999999999999999999999999999999999 7788999999999998866
Q ss_pred CCceeeeeeccC----------CC----CcchhHHHHHHHhcccccCCCCCCCCCCCC---CCCcchhhhhhccHHHHHH
Q 040003 285 GLTFRVWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAV---PPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 285 ~~~~~~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 347 (489)
.......++..| ++ +-++.++++.+++.|..+|......+...+ ...........++++-.+.
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 239 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 239 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHH
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHH
Confidence 544433333322 22 224668999999999999976443221100 0000111223455554444
Q ss_pred HHHHHhhhcCCCCCCcc-----HHHHH
Q 040003 348 LKEMFKMIDTDNSGYIT-----LEELK 369 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~-----~~el~ 369 (489)
+. +++..|++.|++ ++|+.
T Consensus 240 i~---~~L~~dP~~R~t~~~~~a~eil 263 (364)
T d1omwa3 240 LE---GLLQRDVNRRLGCLGRGAQEVK 263 (364)
T ss_dssp HH---HHTCSSTTTSTTTSSSTHHHHH
T ss_pred HH---HHcccCHHHhCCCcccCHHHHH
Confidence 44 678899999998 57764
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-38 Score=304.48 Aligned_cols=235 Identities=22% Similarity=0.280 Sum_probs=174.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|+.++.+..+|||||++++++.+.+.+|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 46999999999999999999999999999999997654333344567778888876433899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
||||+||+|.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+ +..+.+||+|||+|+.......
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc
Confidence 9999999999999998999999999999999999999999999999999999999 7788999999999987654332
Q ss_pred eee--eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 288 FRV--WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 288 ~~~--~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
... ..+..| ++. .++.++++.+++.|..+|.+....... .+. ......+..++++-.+-++
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~-~~~~~~p~~~s~~~~dli~-- 235 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR-MDNPFYPRWLEKEAKDLLV-- 235 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCCCTTSCHHHHHHHH--
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCccCCHHHHHHHH--
Confidence 222 112222 111 234467777777777777543210000 000 0001111234444333333
Q ss_pred HhhhcCCCCCCccHH-HHH
Q 040003 352 FKMIDTDNSGYITLE-ELK 369 (489)
Q Consensus 352 F~~~D~d~~g~i~~~-el~ 369 (489)
+++..|++.|++.. |+.
T Consensus 236 -~~L~~dP~~R~s~~~~l~ 253 (320)
T d1xjda_ 236 -KLFVREPEKRLGVRGDIR 253 (320)
T ss_dssp -HHSCSSGGGSBTTBSCGG
T ss_pred -HhcccCCCCCcCHHHHHH
Confidence 56788888888874 553
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-37 Score=304.20 Aligned_cols=235 Identities=26% Similarity=0.385 Sum_probs=178.1
Q ss_pred Ccccceeecc-eeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe---
Q 040003 125 NLKEMYSLGR-KLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--- 200 (489)
Q Consensus 125 ~~~~~y~~~~-~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--- 200 (489)
.+.+.|.+.. .||+|+||+||+|+++.+++.||||++... ..+.+|+.++.++.+|||||+++++|.+
T Consensus 8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~ 79 (335)
T d2ozaa1 8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA 79 (335)
T ss_dssp CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeeccc
Confidence 3456799875 599999999999999999999999999642 4577899998777689999999999976
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
...+|||||||+||+|.+++..++ .+++..++.++.||+.||+|||++|||||||||+|||+...+..+.+||+|||
T Consensus 80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG 159 (335)
T d2ozaa1 80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 159 (335)
T ss_dssp TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccc
Confidence 467999999999999999998753 69999999999999999999999999999999999999765567889999999
Q ss_pred cccccCCCCceee-eeeccC---------CC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCC-CC--cc----hh
Q 040003 278 LSMFFRPGLTFRV-WLRLHF---------LF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVP-PI--GD----RV 335 (489)
Q Consensus 278 la~~~~~~~~~~~-~~~~~y---------pf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~-~~--~~----~~ 335 (489)
+|+.......... ..+..| +| +-++.++++.+++.|..+|.+....... .+. .. .. ..
T Consensus 160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (335)
T d2ozaa1 160 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 239 (335)
T ss_dssp TCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTT
T ss_pred eeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCc
Confidence 9998765443222 222223 22 2245689999999999999754321110 000 00 00 01
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
....++++-.+.++ +++..|++.|++.+|+..
T Consensus 240 ~~~~~s~~~~~li~---~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 240 EWSEVSEEVKMLIR---NLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp HHHHSCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred ccccCCHHHHHHHH---HHccCChhHCcCHHHHHc
Confidence 11234554444444 668899999999999865
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.7e-37 Score=297.22 Aligned_cols=239 Identities=21% Similarity=0.227 Sum_probs=166.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc---EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK---EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++.++||+|+||+||+|+++.+++ .||||.+... ......+.+.+|+++|++| +|||||++++++.+.+.+
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~ 102 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPV 102 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS--CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSC
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEE
Confidence 459999999999999999999987765 5888887543 3456677899999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||++|+|.+++... +.+++..+..++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+.+.
T Consensus 103 ~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~ 179 (299)
T d1jpaa_ 103 MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLE 179 (299)
T ss_dssp EEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-------
T ss_pred EEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccceEcc
Confidence 9999999999999988764 569999999999999999999999999999999999999 778899999999999876
Q ss_pred CCCceee-------eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhcc
Q 040003 284 PGLTFRV-------WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLS 341 (489)
Q Consensus 284 ~~~~~~~-------~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 341 (489)
....... ..+..| ++. -++.+.++.+++. |..+|.+....... .+..-...-.....+
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 259 (299)
T d1jpaa_ 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 259 (299)
T ss_dssp ----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred CCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccch
Confidence 4432211 111122 121 2345778888875 77777543221100 000000000111223
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+-.+. +-.++..|++.|.++.|+...|.++
T Consensus 260 ~~l~~l---i~~cl~~~P~~RPs~~ei~~~L~~~ 290 (299)
T d1jpaa_ 260 SALHQL---MLDCWQKDRNHRPKFGQIVNTLDKM 290 (299)
T ss_dssp HHHHHH---HHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHH---HHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 322222 3367889999999999988777553
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-38 Score=302.71 Aligned_cols=232 Identities=22% Similarity=0.274 Sum_probs=166.0
Q ss_pred ecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCH--HHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEe
Q 040003 132 LGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTE--EDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVME 209 (489)
Q Consensus 132 ~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 209 (489)
.+++||+|+||+||+|+++.+|+.||||+++....... ...+.+.+|+.+|+++ +|||||+++++|.+.+++|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~ivmE 80 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFD 80 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeehhh
Confidence 35789999999999999999999999999976443221 1235688999999999 89999999999999999999999
Q ss_pred ecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCcee
Q 040003 210 LCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFR 289 (489)
Q Consensus 210 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~ 289 (489)
||.++++..+....+.+++..++.+++||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.......
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~ 157 (299)
T d1ua2a_ 81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAY 157 (299)
T ss_dssp CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCC
T ss_pred hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCcccc
Confidence 99988877666666789999999999999999999999999999999999999 778899999999998775433211
Q ss_pred --eeeeccC----------CC----CcchhHHHHHHHhcccccCC-------------------CCCCCCCCCC------
Q 040003 290 --VWLRLHF----------LF----FQKQRQSVLQTRLVRNLNEP-------------------GSLWPDKVAV------ 328 (489)
Q Consensus 290 --~~~~~~y----------pf----~~~~~~~~~~~i~~~~~~~~-------------------~~~~~~~~~~------ 328 (489)
.+.+..| .| +.++.++++.+++.|...|+ ...|+.....
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T d1ua2a_ 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237 (299)
T ss_dssp CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence 1222222 11 12344566666666665554 3344332211
Q ss_pred C---CCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 040003 329 P---PIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 329 ~---~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
+ ......+...++++-.+-++ +++..|++.|+|++|+.+
T Consensus 238 ~~~~~~~~~~~~~~~s~~~~dll~---~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 238 KSFPGIPLHHIFSAAGDDLLDLIQ---GLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCHHHHCTTCCHHHHHHHH---HHHCSSTTTSCCHHHHHT
T ss_pred ccCCCCChHHhcccCCHHHHHHHH---HHccCChhhCcCHHHHhC
Confidence 0 11111112234444444443 678889999999998753
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-37 Score=299.64 Aligned_cols=152 Identities=27% Similarity=0.389 Sum_probs=130.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+++++||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+++|+++ +|||||+++++|.+..++|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cChHHHHHHHHHHHHHHhC-CCCcEEEeccccccccceeEE
Confidence 46999999999999999999999999999999996543 2233456888999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||.++ +.+++.. .+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 80 ~e~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 80 FEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp EECCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCCC
T ss_pred EeecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceeccCC
Confidence 9999764 4444433 3569999999999999999999999999999999999999 67789999999999877543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-37 Score=300.80 Aligned_cols=238 Identities=19% Similarity=0.236 Sum_probs=175.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCc-----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQK-----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|+++++||+|+||+||+|++..+++ .||+|.+.... .......+.+|+.+|.++.+|||||++++++.+.+
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 569999999999999999999876654 69999886532 23445678999999999977999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 040003 203 AVHVVMELCAGGELFDRIIQR-----------------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPEN 259 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~-----------------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~N 259 (489)
.+|||||||+||+|.+++..+ +.+++..+..++.||+.||+|||++|||||||||+|
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N 194 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 194 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence 999999999999999999754 247889999999999999999999999999999999
Q ss_pred EeeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCC
Q 040003 260 FLFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSL 321 (489)
Q Consensus 260 ill~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~ 321 (489)
||+ +.++.+||+|||+|+.......... ..+..| ++. -++.+.++.+++. |..+|.+..
T Consensus 195 ill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~ 271 (325)
T d1rjba_ 195 VLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271 (325)
T ss_dssp EEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccc---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence 999 6678999999999988765543322 222233 222 2355888888885 788887543
Q ss_pred CCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH
Q 040003 322 WPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQ 373 (489)
Q Consensus 322 ~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~ 373 (489)
..... .+............+++-.+.+. .+++.|++.|++.+|+.+.|.
T Consensus 272 ~~~~~~~~~~~~~~~~~p~~~~~~l~~li~---~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 272 VDANFYKLIQNGFKMDQPFYATEEIYIIMQ---SCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp CSHHHHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCcCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHh
Confidence 21100 00000000112233433333333 678899999999999987774
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-37 Score=292.85 Aligned_cols=237 Identities=16% Similarity=0.232 Sum_probs=172.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+++++||+|+||+||+|+.. ..||||+++.... .....+.+.+|+.+|+++ +|||||++++++.+ ..+|||
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~-~~~~lv 81 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA-PQLAIV 81 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEec-cEEEEE
Confidence 45999999999999999999753 3699999975543 345678899999999999 89999999998754 578999
Q ss_pred EeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||+||+|.+++... +.+++..+..++.||+.||+|||++|||||||||+|||| +.++.+||+|||+|+......
T Consensus 82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl---~~~~~~Kl~DFGla~~~~~~~ 158 (276)
T d1uwha_ 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWS 158 (276)
T ss_dssp EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTSSEEECCCCCSCC-----
T ss_pred EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE---cCCCCEEEccccceeeccccC
Confidence 9999999999999754 569999999999999999999999999999999999999 667899999999998765432
Q ss_pred ceee----eeeccC------------CCC----cchhHHHHHHHhcccccCCCCCCCCCC------CCCCCcchhhhhhc
Q 040003 287 TFRV----WLRLHF------------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV------AVPPIGDRVIAESL 340 (489)
Q Consensus 287 ~~~~----~~~~~y------------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 340 (489)
.... ..+..| +|. -++.+.++.+++.|..+|.+..-.... .........+....
T Consensus 159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 238 (276)
T d1uwha_ 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238 (276)
T ss_dssp -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTC
T ss_pred CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccc
Confidence 2111 222222 232 235688999999999888643210000 00000001112223
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
+++-.+.+ -++++.|++.|.++.|+...|..+.
T Consensus 239 ~~~l~~li---~~cl~~dp~~RPt~~~il~~Le~l~ 271 (276)
T d1uwha_ 239 PKAMKRLM---AECLKKKRDERPLFPQILASIELLA 271 (276)
T ss_dssp CHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHHH---HHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 33322222 3678999999999999988876653
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.6e-37 Score=293.75 Aligned_cols=151 Identities=28% Similarity=0.386 Sum_probs=135.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|+++++||+|+||+||+|+++ +|+.||||++..... .....+++.+|+.+|+++ +|||||+++++|.+.+..|++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeEE
Confidence 46999999999999999999986 789999999976432 233357889999999999 799999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||+.++.+..+....+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|.....
T Consensus 79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~ 152 (286)
T d1ob3a_ 79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGI 152 (286)
T ss_dssp EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC
T ss_pred EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceeccc
Confidence 9999887777766667889999999999999999999999999999999999999 7788999999999987754
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-36 Score=286.53 Aligned_cols=232 Identities=18% Similarity=0.193 Sum_probs=167.2
Q ss_pred ceeccCCceEEEEEEEc--CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEEeec
Q 040003 134 RKLGQGQFGTTFLCVEK--ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELC 211 (489)
Q Consensus 134 ~~lG~G~fg~Vy~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 211 (489)
++||+|+||+||+|.+. .+++.||||+++... ......+.+.+|+++|++| +|||||++++++.+ +..|||||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~-~~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhC-CCCCCceEEEEecc-CCEEEEEEcC
Confidence 47999999999999865 356789999996543 3344567899999999999 89999999999865 4678999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCceee-
Q 040003 212 AGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV- 290 (489)
Q Consensus 212 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~- 290 (489)
++|+|.+++...+.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+........
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill---~~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc---cccCcccccchhhhhhcccccccccc
Confidence 999999999888899999999999999999999999999999999999999 5677899999999998765543322
Q ss_pred ----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHHHH
Q 040003 291 ----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLKEM 351 (489)
Q Consensus 291 ----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (489)
..+..| ++. -++.+.++.+++. |..+|.+....... .+.+-.....+..++.+-.+- +
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~l---i 243 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL---M 243 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH---H
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHH---H
Confidence 111112 111 1244677777775 77777643211000 000000001112333333222 2
Q ss_pred HhhhcCCCCCCccHHHHHHHHHH
Q 040003 352 FKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 352 F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-+++..|++.|++..|+...|+.
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~ 266 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRN 266 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhC
Confidence 36788899999999998776654
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-36 Score=286.42 Aligned_cols=237 Identities=20% Similarity=0.241 Sum_probs=173.0
Q ss_pred cceeecc-eeccCCceEEEEEEEcC--CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGR-KLGQGQFGTTFLCVEKA--TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~-~lG~G~fg~Vy~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|.+.+ +||+|+||+||+|.++. ++..||||+++.. ......+++.+|+++|++| +|||||++++++.+ +.+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-~~~ 83 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EAL 83 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh--cCHHHHHHHHHHHHHHHhC-CCCCEeeEeeeecc-CeE
Confidence 4577777 49999999999998764 4457999999653 3456678899999999999 89999999999865 468
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|||||||+||+|.+++... +.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~ 160 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALG 160 (285)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee---ccCCceeeccchhhhccc
Confidence 9999999999999987653 579999999999999999999999999999999999999 556789999999999876
Q ss_pred CCCceee-----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHH
Q 040003 284 PGLTFRV-----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 284 ~~~~~~~-----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (489)
....... ..+..| ++. -++.+.++.+++. |..+|......+.. .+.+-....++..++.+
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~ 240 (285)
T d1u59a_ 161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE 240 (285)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHH
T ss_pred ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHH
Confidence 5443222 111111 111 2345778888775 78877654321100 00000001112233433
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
-.+. +-++++.|++.|.+..++.+.|+.
T Consensus 241 l~~l---i~~cl~~~p~~RPs~~~i~~~L~~ 268 (285)
T d1u59a_ 241 LYAL---MSDCWIYKWEDRPDFLTVEQRMRA 268 (285)
T ss_dssp HHHH---HHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHH---HHHHcCCCHhHCcCHHHHHHHHHH
Confidence 3322 336789999999999998877754
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-36 Score=287.69 Aligned_cols=235 Identities=18% Similarity=0.219 Sum_probs=163.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+||+|++. +++.||||++..... ..+.+.+|+++|+++ +|||||++++++.+.+.+||||
T Consensus 6 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~lv~ 79 (263)
T d1sm2a_ 6 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVF 79 (263)
T ss_dssp CEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEE
T ss_pred HcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC----cHHHHHHHHHHHHhc-CCCCcccccceeccCCceEEEE
Confidence 5999999999999999999986 567899999975432 235789999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||++|+|.+++... ..+++..+..++.||+.||+|||+++||||||||+|||+ +.++.+||+|||+|+.+.....
T Consensus 80 E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~~ 156 (263)
T d1sm2a_ 80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQY 156 (263)
T ss_dssp ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC----------
T ss_pred EecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCCCc
Confidence 999999999988655 568899999999999999999999999999999999999 7778999999999988765433
Q ss_pred eee---eeeccC---------CCCc----chhHHHHHHHhcc-cccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 288 FRV---WLRLHF---------LFFQ----KQRQSVLQTRLVR-NLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 288 ~~~---~~~~~y---------pf~~----~~~~~~~~~i~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
... ..+..| +|.. ++.+.++.+++.+ ...+......... .+........+...+++-.+.
T Consensus 157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l-- 234 (263)
T d1sm2a_ 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQI-- 234 (263)
T ss_dssp --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHH--
T ss_pred eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHH--
Confidence 222 222222 2221 2446778888764 4433322110000 000000001112223322222
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 350 EMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-+++..|++.|.+++|+.+.|+++
T Consensus 235 -i~~cl~~~p~~Rps~~~il~~L~~i 259 (263)
T d1sm2a_ 235 -MNHCWKERPEDRPAFSRLLRQLAEI 259 (263)
T ss_dssp -HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHccCCHhHCcCHHHHHHHHHHH
Confidence 2367888999999999988777654
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-37 Score=293.79 Aligned_cols=233 Identities=22% Similarity=0.321 Sum_probs=178.3
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHH---HHHHHHHHHHHHHHhc-CCCCeeEEEEEEEeCC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEE---DVEDVRREIRIMHHLA-GHPNVIQIVGAYEDAV 202 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~---~~~~~~~E~~~l~~l~-~hpniv~~~~~~~~~~ 202 (489)
.++|++++.||+|+||+||+|+++.+|+.||||++.+....... ...++.+|+.+|+++. .|||||+++++|.+.+
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~ 82 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 82 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence 45799999999999999999999999999999999875543321 1234678999999994 3899999999999999
Q ss_pred eEEEEEeecCC-CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 203 AVHVVMELCAG-GELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 203 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
..|+||||+.+ +++.+++...+.+++..++.++.||+.||+|||++|||||||||+|||+.. ..+.+||+|||+|+.
T Consensus 83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~--~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCEE
T ss_pred eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec--CCCeEEECcccccee
Confidence 99999999976 688888888889999999999999999999999999999999999999942 346899999999987
Q ss_pred cCCCCceeeeeeccC---------CC-----CcchhHHHHHHHhcccccCCCCCCCCCCCCCCCcchhhhhhccHHHHHH
Q 040003 282 FRPGLTFRVWLRLHF---------LF-----FQKQRQSVLQTRLVRNLNEPGSLWPDKVAVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 282 ~~~~~~~~~~~~~~y---------pf-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (489)
.......+...+..| ++ +-++.++++.+++.|..+|....- ... ........++++-.+.
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~----i~~--~~~~~~~~~s~~~~~l 234 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----IIR--GQVFFRQRVSSECQHL 234 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----HHH--CCCCCSSCCCHHHHHH
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH----Hhh--cccCCCCCCCHHHHHH
Confidence 765443333333333 22 234568899999999988864210 000 0001122345444433
Q ss_pred HHHHHhhhcCCCCCCccHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKK 370 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~ 370 (489)
++ +++..|++.|++.+|+..
T Consensus 235 i~---~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 235 IR---WCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp HH---HHTCSSGGGSCCHHHHHT
T ss_pred HH---HHccCCHhHCcCHHHHhc
Confidence 33 567888888999988754
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-36 Score=288.78 Aligned_cols=234 Identities=19% Similarity=0.253 Sum_probs=168.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|+++++||+|+||+||+|+++ +++.||||++..... ..+.+.+|+++|+++ +|||||++++++.+ +.+|||
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~-~~~~iv 85 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYII 85 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC----CHHHHHHHHHHHHhC-CCCCEeEEEeeecc-CCeEEE
Confidence 56999999999999999999975 578899999975432 235789999999999 89999999998755 567999
Q ss_pred EeecCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQR--GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||++|+|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||| +.++.+||+|||+|+.+...
T Consensus 86 ~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~~~~ 162 (272)
T d1qpca_ 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDN 162 (272)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeeccccceEEccCC
Confidence 9999999999877433 368999999999999999999999999999999999999 77889999999999987654
Q ss_pred Cceee---eeeccC---------CC----CcchhHHHHHHHhccc-ccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF---------LF----FQKQRQSVLQTRLVRN-LNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y---------pf----~~~~~~~~~~~i~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... ..+..| ++ +-++.+.++.+++.+. +.+......... .+........+..++.+-.+.
T Consensus 163 ~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l 242 (272)
T d1qpca_ 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242 (272)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHH
Confidence 33221 111122 11 1234467888888643 333322110000 000000111122344433333
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
+. +++..|++.|.+++|+...|..
T Consensus 243 i~---~cl~~~P~~Rpt~~ei~~~L~~ 266 (272)
T d1qpca_ 243 MR---LCWKERPEDRPTFDYLRSVLED 266 (272)
T ss_dssp HH---HHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH---HHcCCCHhHCcCHHHHHHHhhh
Confidence 33 6788888899999998877654
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-36 Score=279.97 Aligned_cols=232 Identities=18% Similarity=0.243 Sum_probs=170.3
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|+++++||+|+||+||+|+++ +++.||||++++.... .+.+.+|+.+++++ +|||||++++++.+.+.+|+||
T Consensus 5 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~----~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~iv~ 78 (258)
T d1k2pa_ 5 DLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS----EDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIIT 78 (258)
T ss_dssp CCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSC----HHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEEEE
T ss_pred HCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCC----HHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEE
Confidence 5899999999999999999985 7789999999865432 35788999999999 8999999999999999999999
Q ss_pred eecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCCc
Q 040003 209 ELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGLT 287 (489)
Q Consensus 209 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~~ 287 (489)
|||.+|+|..++.. ...+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+.....
T Consensus 79 Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~~ 155 (258)
T d1k2pa_ 79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEY 155 (258)
T ss_dssp ECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSSC
T ss_pred EccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCCc
Confidence 99999999998754 4578999999999999999999999999999999999999 7788999999999987755433
Q ss_pred eee---eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 288 FRV---WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 288 ~~~---~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
... ..+..| ++.. ++.+.++.+++. |+++|......... .+........+...+++ +..+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~-l~~l- 233 (258)
T d1k2pa_ 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK-VYTI- 233 (258)
T ss_dssp CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHH-HHHH-
T ss_pred eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHH-HHHH-
Confidence 222 111112 2221 234666777764 66666543211100 00000001111222322 2222
Q ss_pred HHHhhhcCCCCCCccHHHHHHHH
Q 040003 350 EMFKMIDTDNSGYITLEELKKGL 372 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l 372 (489)
+-++++.|++.|++.+|+.+-|
T Consensus 234 -i~~cl~~dP~~RPt~~eil~~L 255 (258)
T d1k2pa_ 234 -MYSCWHEKADERPTFKILLSNI 255 (258)
T ss_dssp -HHHTTCSSGGGSCCHHHHHHHH
T ss_pred -HHHHccCCHhHCcCHHHHHHHh
Confidence 2367888888999988887655
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-35 Score=284.82 Aligned_cols=154 Identities=25% Similarity=0.391 Sum_probs=141.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|+++++||+|+||+||+|+++.+++.||||+++... .......++.+|+.+|+.+ +|||||+++++|.+....++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhh-CChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeEE
Confidence 46999999999999999999999999999999997654 3445678899999999999 899999999999999999999
Q ss_pred EeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||++.+++|..++...+.+++..++.++.|++.||+|||++|||||||||+|||+ +.++.+||+|||+|+......
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli---~~~~~~kl~DFG~a~~~~~~~ 155 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSCC
T ss_pred eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc---ccCCceeeeecchhhcccCCC
Confidence 9999999998888888899999999999999999999999999999999999999 667889999999999876443
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-36 Score=284.35 Aligned_cols=238 Identities=18% Similarity=0.204 Sum_probs=165.4
Q ss_pred ceeecceeccCCceEEEEEEEcCCC----cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQ----KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.|++.++||+|+||+||+|.++.++ ..||||++... ........+.+|+++|++| +|||||++++++.+....
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~~~~~ 84 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG--YTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPM 84 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc--cChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEecCCce
Confidence 4899999999999999999987654 46999998643 3455667899999999999 899999999999999999
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++|||||.++++.+.+... +.+++..+..++.||+.||+|||+++||||||||+|||| +.++.+||+|||+|+.+.
T Consensus 85 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~ 161 (283)
T d1mqba_ 85 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE 161 (283)
T ss_dssp EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC-----
T ss_pred EEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchhhccc
Confidence 9999999999999887655 579999999999999999999999999999999999999 778899999999999875
Q ss_pred CCCceee-----eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHH
Q 040003 284 PGLTFRV-----WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEE 343 (489)
Q Consensus 284 ~~~~~~~-----~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 343 (489)
....... ..+..| .+. -++.+.++.+++.+...+....-.... .+..-.........+.+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (283)
T d1mqba_ 162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSA 241 (283)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHH
T ss_pred CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHH
Confidence 4432211 112222 121 124467777877654433221110000 00000000111223332
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
-.+. +-.++..|++.|.++.|+...|..+
T Consensus 242 l~~l---i~~cl~~~p~~RPt~~eil~~L~~l 270 (283)
T d1mqba_ 242 IYQL---MMQCWQQERARRPKFADIVSILDKL 270 (283)
T ss_dssp HHHH---HHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHH---HHHHCcCCHhHCcCHHHHHHHHHHH
Confidence 2222 2367888899999999887776543
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-36 Score=284.62 Aligned_cols=238 Identities=21% Similarity=0.251 Sum_probs=164.9
Q ss_pred cceeecceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
+.|++++.||+|+||+||+|++..++ ..||||.+... ......+.+.+|+.+|+++ +|||||++++++. .+.+
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~ 82 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPV 82 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSC
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCeE
Confidence 56999999999999999999987543 46888887532 3456677899999999999 8999999999996 4678
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
|+|||||.+|+|.+++... +.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 83 ~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll---~~~~~~Kl~DfG~a~~~~ 159 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYME 159 (273)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC--------
T ss_pred EEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee---cCCCcEEEccchhheecc
Confidence 9999999999999987654 568999999999999999999999999999999999999 556789999999998875
Q ss_pred CCCceee---eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHH
Q 040003 284 PGLTFRV---WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEI 345 (489)
Q Consensus 284 ~~~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 345 (489)
....... ..+..| ++. -++.+.++.+++. |..+|......... .+..-....+...++.+-.
T Consensus 160 ~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 239 (273)
T d1mp8a_ 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 239 (273)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred CCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 4332221 222222 222 2345778888775 77777654321110 0000000111223444433
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+.+. +++..|++.|++++|+...|..+
T Consensus 240 ~li~---~cl~~dp~~Rps~~ei~~~L~~i 266 (273)
T d1mp8a_ 240 SLMT---KCWAYDPSRRPRFTELKAQLSTI 266 (273)
T ss_dssp HHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHH---HHcCCCHhHCcCHHHHHHHHHHH
Confidence 3333 67888999999999988777553
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-35 Score=291.77 Aligned_cols=188 Identities=22% Similarity=0.329 Sum_probs=149.0
Q ss_pred CcccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC--
Q 040003 125 NLKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV-- 202 (489)
Q Consensus 125 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 202 (489)
.+.++|+++++||+|+||+||+|+++.+|+.||||++.+.. ......+.+.+|+++|+++ +|||||+++++|...+
T Consensus 15 ~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~ 92 (346)
T d1cm8a_ 15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETL 92 (346)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSST
T ss_pred ecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCccc
Confidence 35678999999999999999999999999999999997543 4556678899999999999 8999999999997654
Q ss_pred ----eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecc
Q 040003 203 ----AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGL 278 (489)
Q Consensus 203 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGl 278 (489)
++||||||| +.+|... .+.+.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+
T Consensus 93 ~~~~~~~lv~e~~-~~~l~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 93 DDFTDFYLVMPFM-GTDLGKL-MKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL 167 (346)
T ss_dssp TTCCCCEEEEECC-SEEHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred cccceEEEEEecc-cccHHHH-HHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---ccccccccccccc
Confidence 579999999 5566654 456789999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCCceeeeeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 279 SMFFRPGLTFRVWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 279 a~~~~~~~~~~~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
|+......+.. +.+..| .-+.++.++++.+++.|.++|...
T Consensus 168 a~~~~~~~~~~-~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~ 222 (346)
T d1cm8a_ 168 ARQADSEMTGY-VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 222 (346)
T ss_dssp CEECCSSCCSS-CSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeccCCccccc-cccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCC
Confidence 98875443321 222222 122345678888888888877643
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-35 Score=280.01 Aligned_cols=240 Identities=21% Similarity=0.209 Sum_probs=166.3
Q ss_pred cceeecceeccCCceEEEEEEEcCC-C--cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKAT-Q--KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~-~--~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
++|++.+.||+|+||.||+|++..+ + ..||||++.+.........+.+.+|+.+|+++ +|||||++++++.+ ...
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee-cch
Confidence 4599999999999999999986543 3 36899999876655566678899999999999 89999999999976 467
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
++|||||++|+|.+++..+ +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll---~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCEECC
T ss_pred heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcc---ccccceeeccchhhhhcc
Confidence 8999999999999887654 579999999999999999999999999999999999999 456789999999999876
Q ss_pred CCCceee-----eeeccC---------CC----CcchhHHHHHHHhc-ccccCCCCCCCCCC-CC-CCCcchhhhhhccH
Q 040003 284 PGLTFRV-----WLRLHF---------LF----FQKQRQSVLQTRLV-RNLNEPGSLWPDKV-AV-PPIGDRVIAESLSE 342 (489)
Q Consensus 284 ~~~~~~~-----~~~~~y---------pf----~~~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 342 (489)
....... ..+..| ++ +-++.+.++.+++. |..+|......... .+ ...........++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 242 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCH
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccH
Confidence 5443222 111111 11 11244677778875 77777644321110 00 00000111223343
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-.+-+ -+++..|++.|+++.|+...|.+.
T Consensus 243 ~l~~li---~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 243 DIYNVM---VQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp HHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHH---HHHcCCChhHCcCHHHHHHHHHhc
Confidence 332222 367899999999999999888653
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.8e-35 Score=280.56 Aligned_cols=239 Identities=19% Similarity=0.209 Sum_probs=176.6
Q ss_pred ccceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 201 (489)
.+.|++++.||+|+||+||+|+++. +++.||||++... ......+++.+|+++|+++ +||||+++++++.+.
T Consensus 12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~ 88 (301)
T d1lufa_ 12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEF-DNPNIVKLLGVCAVG 88 (301)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh--cChHHHHHHHHHHHHHHhc-CCCCcccceeeeccC
Confidence 4569999999999999999999763 5678999998653 3455667899999999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHHcC------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 040003 202 VAVHVVMELCAGGELFDRIIQRG------------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKP 257 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~------------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp 257 (489)
...++|||||.+|+|.+++.... .++...+..++.|++.||+|||+++||||||||
T Consensus 89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp 168 (301)
T d1lufa_ 89 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 168 (301)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcc
Confidence 99999999999999999986532 378889999999999999999999999999999
Q ss_pred CCEeeeeCCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhcccc-cCCC
Q 040003 258 ENFLFINQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLVRNL-NEPG 319 (489)
Q Consensus 258 ~Nill~~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~~~~-~~~~ 319 (489)
+|||| +.++.+||+|||+|+.+.+...... .++..| +|. -++.+.++.+++.+.. +|..
T Consensus 169 ~NILl---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~ 245 (301)
T d1lufa_ 169 RNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 245 (301)
T ss_dssp GGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cceEE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence 99999 6778899999999987654332221 122222 222 1345677777776643 3332
Q ss_pred CCCCCCC--CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 320 SLWPDKV--AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 320 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. +.... .+..-....+...++++-..- +-.++..|++.|+++.|+.+.|+++
T Consensus 246 ~-~~~e~~~~v~~~~~~~~p~~~~~~~~~l---i~~cl~~~P~~RPt~~ev~~~L~~i 299 (301)
T d1lufa_ 246 M-AHEEVIYYVRDGNILACPENCPLELYNL---MRLCWSKLPADRPSFCSIHRILQRM 299 (301)
T ss_dssp S-CHHHHHHHHHTTCCCCCCTTCCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHcCCCCCCCccchHHHHHH---HHHHcCCChhHCcCHHHHHHHHHHh
Confidence 2 11100 000000111223344433333 3367899999999999999888775
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-35 Score=283.50 Aligned_cols=240 Identities=21% Similarity=0.261 Sum_probs=166.4
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-C
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-A 201 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 201 (489)
+.|+++++||+|+||+||+|++.. +++.||||++... ......+.+.+|+.++.++.+|+|||.+++++.. .
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~ 90 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 90 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc--cCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence 569999999999999999999764 4468999998643 3445567788999999999789999999998765 4
Q ss_pred CeEEEEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC
Q 040003 202 VAVHVVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ 265 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~ 265 (489)
..+|+|||||++|+|.+++... ..+++..+..++.||+.||+|||++|||||||||+||||
T Consensus 91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl--- 167 (299)
T d1ywna1 91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--- 167 (299)
T ss_dssp SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---
T ss_pred CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE---
Confidence 5689999999999999999653 247899999999999999999999999999999999999
Q ss_pred CCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhcc-cccCCCCCCCCCC-
Q 040003 266 QEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLVR-NLNEPGSLWPDKV- 326 (489)
Q Consensus 266 ~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~~-~~~~~~~~~~~~~- 326 (489)
+.++.+||+|||+|+.......... .++..| ++. -++.+.++.+++.+ ..+|+........
T Consensus 168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~ 247 (299)
T d1ywna1 168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 247 (299)
T ss_dssp CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH
T ss_pred CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 6778999999999987654332211 222223 222 23457788888865 4455543221100
Q ss_pred -CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+..-....+...++++-.+.+. +++..|++.|++++|+.+.|..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~l~~li~---~cl~~dP~~Rpt~~eil~~L~~i 294 (299)
T d1ywna1 248 RRLKEGTRMRAPDYTTPEMYQTML---DCWHGEPSQRPTFSELVEHLGNL 294 (299)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCccCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHH
Confidence 00000001112233443333333 67888999999999988777553
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-35 Score=282.02 Aligned_cols=240 Identities=18% Similarity=0.217 Sum_probs=169.8
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcE--EEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKE--FACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
+.|++.++||+|+||+||+|+++.++.. ||||.+.. .......+.+.+|+++|+++.+|||||++++++.+.+.+|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC--C------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECc--ccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 4599999999999999999999988875 56666643 2334456789999999999867999999999999999999
Q ss_pred EEEeecCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCC
Q 040003 206 VVMELCAGGELFDRIIQR----------------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEA 269 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~ 269 (489)
||||||+||+|.+++... ..+++..+..++.||+.||.|||+++||||||||+|||+ +.++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~---~~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE---cCCC
Confidence 999999999999998653 568999999999999999999999999999999999999 6678
Q ss_pred CeEEEeeccccccCCCCceee-eeeccC---------CCC----cchhHHHHHHHhccc-ccCCCCCCCCCC-CCCCCcc
Q 040003 270 PLKTIDFGLSMFFRPGLTFRV-WLRLHF---------LFF----QKQRQSVLQTRLVRN-LNEPGSLWPDKV-AVPPIGD 333 (489)
Q Consensus 270 ~~kl~DFGla~~~~~~~~~~~-~~~~~y---------pf~----~~~~~~~~~~i~~~~-~~~~~~~~~~~~-~~~~~~~ 333 (489)
.+||+|||+|+.......... ..+..| ++. -++.+.++.+++.|. +.|......... .+.+-..
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~ 244 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence 899999999986643322211 111122 111 123466667766643 334322110000 0000001
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
......++++-.+-+. +++..|++.|++++|+...|.++
T Consensus 245 ~~~~~~~~~~~~~li~---~cl~~dP~~RPs~~eil~~L~~i 283 (309)
T d1fvra_ 245 LEKPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRM 283 (309)
T ss_dssp CCCCTTBCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHH
Confidence 1112234444333333 67899999999999998877554
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-35 Score=280.28 Aligned_cols=235 Identities=20% Similarity=0.224 Sum_probs=165.2
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
+.|++++.||+|+||+||+|+++.+ +.||||++..... ..+.+.+|+.+|+++ +|||||++++++.+ +.+|+|
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~-~~~~lv 89 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 89 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC----CHHHHHHHHHHHHhc-ccCCEeEEEEEEec-CCeEEE
Confidence 4699999999999999999998765 5799999965432 236789999999999 89999999999855 568999
Q ss_pred EeecCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 208 MELCAGGELFDRIIQ--RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
||||.+|+|..++.. .+.+++..+..++.||+.||.|||++||+||||||+|||| +.++.+||+|||+|+.+...
T Consensus 90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll---~~~~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDN 166 (285)
T ss_dssp ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC-----
T ss_pred EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE---CCCCcEEEcccchhhhccCC
Confidence 999999999988754 3579999999999999999999999999999999999999 66788999999999887544
Q ss_pred Cceee---eeeccC---------CCC----cchhHHHHHHHhccccc-CCCCCCCCCC-CCCCCcchhhhhhccHHHHHH
Q 040003 286 LTFRV---WLRLHF---------LFF----QKQRQSVLQTRLVRNLN-EPGSLWPDKV-AVPPIGDRVIAESLSEEEIAG 347 (489)
Q Consensus 286 ~~~~~---~~~~~y---------pf~----~~~~~~~~~~i~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 347 (489)
..... ..+..| .+. -++.+.++.+++.+... +......... .+.......+...++++-.+.
T Consensus 167 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 246 (285)
T d1fmka3 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 246 (285)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred CceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHH
Confidence 33222 112222 111 12446777777765333 3221110000 000000111222334333322
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+-++++.|++.|++++++..+|...
T Consensus 247 ---i~~cl~~dP~~Rps~~~i~~~L~~~ 271 (285)
T d1fmka3 247 ---MCQCWRKEPEERPTFEYLQAFLEDY 271 (285)
T ss_dssp ---HHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred ---HHHHcccCHhHCcCHHHHHHHHhhh
Confidence 3478889999999999998877664
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-35 Score=282.37 Aligned_cols=241 Identities=21% Similarity=0.281 Sum_probs=173.4
Q ss_pred ccceeecceeccCCceEEEEEEEcCCC-------cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQ-------KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYE 199 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 199 (489)
.+.|++++.||+|+||.||+|++..++ ..||||++.+. ........+.+|+.++.++.+|||||+++++|.
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~ 89 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 89 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc--cChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence 356999999999999999999987654 36999998654 345566789999999999978999999999999
Q ss_pred eCCeEEEEEeecCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeee
Q 040003 200 DAVAVHVVMELCAGGELFDRIIQRG----------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFI 263 (489)
Q Consensus 200 ~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~ 263 (489)
+.+.+|+|||||.+|+|.+++..+. .+++..+..++.||+.||+|||++|||||||||+|||+
T Consensus 90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl- 168 (299)
T d1fgka_ 90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV- 168 (299)
T ss_dssp SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee-
Confidence 9999999999999999999997543 48999999999999999999999999999999999999
Q ss_pred eCCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCC
Q 040003 264 NQQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDK 325 (489)
Q Consensus 264 ~~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~ 325 (489)
+.++.+||+|||+++.......... ..+..| +|. -++.+.++.+++. |...|........
T Consensus 169 --~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~ 246 (299)
T d1fgka_ 169 --TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246 (299)
T ss_dssp --CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred --cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH
Confidence 7788999999999997754432221 111122 222 2345777888875 6666654321100
Q ss_pred C-CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 326 V-AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 326 ~-~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. .+..-........++++-.+-+ -+++..|++.|+++.|+.+.|.++
T Consensus 247 ~~~i~~~~~~~~p~~~~~~l~~li---~~cl~~dP~~Rps~~eil~~L~~i 294 (299)
T d1fgka_ 247 FKLLKEGHRMDKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDLDRI 294 (299)
T ss_dssp HHHHHTTCCCCCCSSCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccchHHHHHHH---HHHccCCHhHCcCHHHHHHHHHHH
Confidence 0 0000000111223344333333 367889999999999998887654
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-34 Score=283.84 Aligned_cols=187 Identities=23% Similarity=0.313 Sum_probs=148.7
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+..+|+++++||+|+||+||+|+++.+|+.||||++.+. ......+.+.+|+++|++| +|||||++++++....
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~~ 82 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQ 82 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCT--TCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTT
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehh--cChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccccc
Confidence 345699999999999999999999999999999999753 3456677899999999999 8999999999997643
Q ss_pred --eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 203 --AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 203 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.+|++ +|+.||+|.+++.. +.+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+
T Consensus 83 ~~~~~l~-~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~a~ 157 (345)
T d1pmea_ 83 MKDVYLV-THLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLAR 157 (345)
T ss_dssp CCCEEEE-EECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred cceEEEE-EeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE---CCCCCEEEcccCcee
Confidence 34555 55668999998865 579999999999999999999999999999999999999 677899999999998
Q ss_pred ccCCCCcee-----eeeeccC--------------CCCcchhHHHHHHHhcccccCCCC
Q 040003 281 FFRPGLTFR-----VWLRLHF--------------LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 281 ~~~~~~~~~-----~~~~~~y--------------pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
......... .+.+..| .-+.++.+.++.+++.|..+|...
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~ 216 (345)
T d1pmea_ 158 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 216 (345)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred eccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCC
Confidence 764432211 1122222 122346688999999999888654
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.7e-34 Score=281.88 Aligned_cols=181 Identities=26% Similarity=0.444 Sum_probs=147.5
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe--CCeEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED--AVAVH 205 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 205 (489)
++|+++++||+|+||+||+|+++.+++.||||++++. ..+++.+|+++|+++.+||||++++++|.. ...+|
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~ 108 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 108 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence 5699999999999999999999999999999998643 236788999999999669999999999974 45799
Q ss_pred EEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 206 VVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 206 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
+|||||.+++|.... +.+++..++.+++||+.||+|||++|||||||||+|||+.. ....+||+|||+|+....+
T Consensus 109 ~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~~~vkl~DFG~a~~~~~~ 183 (328)
T d3bqca1 109 LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPG 183 (328)
T ss_dssp EEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CCCeeeecccccceeccCC
Confidence 999999999997653 57999999999999999999999999999999999999942 2346999999999987655
Q ss_pred Cceee-eeeccC------------C--CCcchhHHHHHHHhcccccCCC
Q 040003 286 LTFRV-WLRLHF------------L--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 286 ~~~~~-~~~~~y------------p--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
..... +.+..| . -+.++.++++.+++.|..+|..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~ 232 (328)
T d3bqca1 184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232 (328)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCC
Confidence 43322 112222 1 1234567788888888777653
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-35 Score=285.51 Aligned_cols=236 Identities=23% Similarity=0.318 Sum_probs=175.4
Q ss_pred cceeecceeccCCceEEEEEEE---cCCCcEEEEEEeecccCC-CHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCe
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVE---KATQKEFACKSIAKRKLT-TEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVA 203 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~---~~~~~~~avK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 203 (489)
++|+++++||+|+||+||+|++ ..+|+.||||++.+.... .....+.+.+|+++|+++.+||||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 5699999999999999999987 447899999998764321 122345678999999999655899999999999999
Q ss_pred EEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 204 VHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 204 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+|+|||||.+|+|.+++...+.+++..+..+++||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECC
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee---cCCCCEEEeeccchhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 777899999999998764
Q ss_pred CCCceee--------------eeeccCCC----CcchhHHHHHHHhcccccCCCCCCCCCC-CCCC-C--cchhhhhhcc
Q 040003 284 PGLTFRV--------------WLRLHFLF----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-AVPP-I--GDRVIAESLS 341 (489)
Q Consensus 284 ~~~~~~~--------------~~~~~ypf----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~-~--~~~~~~~~~~ 341 (489)
....... +....+.+ +-++.++++.+++.|..+|......... .+.+ . ....+....+
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s 260 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 260 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCC
Confidence 3322111 11111112 2356689999999999998765433211 0000 0 0000112334
Q ss_pred HHHHHHHHHHHhhhcCCCCCCcc-----HHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYIT-----LEELK 369 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~-----~~el~ 369 (489)
.+-.+.+. ++++.|++.|++ ++|+.
T Consensus 261 ~~~~~li~---~~l~~dP~~R~s~~~~t~~eil 290 (322)
T d1vzoa_ 261 ALAKDLIQ---RLLMKDPKKRLGCGPRDADEIK 290 (322)
T ss_dssp HHHHHHHH---HHTCSSGGGSTTSSTTTHHHHH
T ss_pred HHHHHHHH---HHcccCHHHcCCCCcccHHHHH
Confidence 44333333 567778877873 56653
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-35 Score=281.88 Aligned_cols=237 Identities=15% Similarity=0.173 Sum_probs=167.6
Q ss_pred ceeecceeccCCceEEEEEEEcCCCc----EEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQK----EFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAV 204 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 204 (489)
.|+++++||+|+||+||+|.+..+|+ .||+|.+... ......+.+.+|+.+|+++ +|||||++++++.+. ..
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-~~ 85 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TV 85 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-SE
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc--cCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC-Ce
Confidence 49999999999999999999988876 4777776532 2334467899999999999 899999999999875 56
Q ss_pred EEEEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccC
Q 040003 205 HVVMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFR 283 (489)
Q Consensus 205 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~ 283 (489)
+++||||.+|+|.+.+... ..+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||+|+.+.
T Consensus 86 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll---~~~~~~kl~DFGla~~~~ 162 (317)
T d1xkka_ 86 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLG 162 (317)
T ss_dssp EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCCSHHHHTT
T ss_pred eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee---CCCCCeEeeccccceecc
Confidence 7888999999999988764 579999999999999999999999999999999999999 566789999999999876
Q ss_pred CCCceee----eeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHH
Q 040003 284 PGLTFRV----WLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 284 ~~~~~~~----~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 344 (489)
....... ..+..| +|.. ++.+.++.+++. |..+|....+.... .+.+-.........+.+-
T Consensus 163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~ 242 (317)
T d1xkka_ 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDV 242 (317)
T ss_dssp TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHH
T ss_pred cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHH
Confidence 5443221 122233 2222 345778888886 67777644321110 000000001112333333
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
.+.+. +++..|++.|++..|+...|..+
T Consensus 243 ~~li~---~cl~~dP~~RPs~~eil~~l~~~ 270 (317)
T d1xkka_ 243 YMIMV---KCWMIDADSRPKFRELIIEFSKM 270 (317)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHH---HhCCCChhhCcCHHHHHHHHHHH
Confidence 22223 67888889999999987766443
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-34 Score=283.35 Aligned_cols=180 Identities=22% Similarity=0.257 Sum_probs=142.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe------CC
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED------AV 202 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~~ 202 (489)
.|+.+++||+|+||+||+|+++.+|+.||||++.+... ...+|+++|++| +|||||+++++|.. ..
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~~ 92 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEV 92 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSCC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhc-CCCCCCcEEEEEEecCccCCce
Confidence 49999999999999999999999999999999976432 224799999999 89999999999854 34
Q ss_pred eEEEEEeecCCCchHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCC-CCeEEEeecc
Q 040003 203 AVHVVMELCAGGELFDRI---IQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEE-APLKTIDFGL 278 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~-~~~kl~DFGl 278 (489)
++|||||||+++.+.... .....+++..++.++.||+.||+|||++|||||||||+|||+ +.+ ..+||+|||+
T Consensus 93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl---~~~~~~~kl~DFG~ 169 (350)
T d1q5ka_ 93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGS 169 (350)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTTCCEEECCCTT
T ss_pred EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEE---ecCCCceeEecccc
Confidence 689999999766433322 234579999999999999999999999999999999999999 444 4799999999
Q ss_pred ccccCCCCceee-eeecc------------CC--CCcchhHHHHHHHhcccccCCC
Q 040003 279 SMFFRPGLTFRV-WLRLH------------FL--FFQKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 279 a~~~~~~~~~~~-~~~~~------------yp--f~~~~~~~~~~~i~~~~~~~~~ 319 (489)
|+.+..+..... +.+.. |. -+-++.++++.+++.|...|..
T Consensus 170 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~ 225 (350)
T d1q5ka_ 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225 (350)
T ss_dssp CEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred hhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCC
Confidence 998765443322 11111 21 1224567888888888887764
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-34 Score=281.04 Aligned_cols=152 Identities=24% Similarity=0.341 Sum_probs=130.0
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-------
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED------- 200 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 200 (489)
++|+++++||+|+||+||+|+++.+|+.||||++.+... ......++.+|+.+|+++ +||||+++++++..
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C-TTSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC-------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccccc
Confidence 569999999999999999999999999999999876543 233456788999999999 79999999998855
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
...+|+|||||.++.+.........+++..++.+++||+.||+|||++|||||||||+|||+ +.++.+||+|||+|
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg~~ 164 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLA 164 (318)
T ss_dssp ---CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTC
T ss_pred cCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee---cCCCcEEeeeccee
Confidence 45689999999887766555556789999999999999999999999999999999999999 77889999999999
Q ss_pred cccCC
Q 040003 280 MFFRP 284 (489)
Q Consensus 280 ~~~~~ 284 (489)
+.+..
T Consensus 165 ~~~~~ 169 (318)
T d3blha1 165 RAFSL 169 (318)
T ss_dssp EECCC
T ss_pred eeccc
Confidence 87653
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-34 Score=278.33 Aligned_cols=239 Identities=19% Similarity=0.249 Sum_probs=176.2
Q ss_pred cceeecceeccCCceEEEEEEEc-----CCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEK-----ATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|+++++||+|+||.||+|++. .+++.||||++... ........+.+|+.+++++.+|||||++++++.+..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~ 100 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcc--cCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence 56999999999999999999864 46678999999754 345566789999999999977999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeee
Q 040003 203 AVHVVMELCAGGELFDRIIQRG------------------HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFIN 264 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~ 264 (489)
.+|||||||++|+|.+++.... .+++..+..++.||+.||+|||++|||||||||+|||+
T Consensus 101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~-- 178 (311)
T d1t46a_ 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL-- 178 (311)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc--
Confidence 9999999999999999987543 48899999999999999999999999999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhc-ccccCCCCCCCCCC
Q 040003 265 QQEEAPLKTIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLV-RNLNEPGSLWPDKV 326 (489)
Q Consensus 265 ~~~~~~~kl~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 326 (489)
+..+.+||+|||+++.......... .++..| .+. -++.+.++.+++. |.+.+....-....
T Consensus 179 -~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~ 257 (311)
T d1t46a_ 179 -THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (311)
T ss_dssp -ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred -cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 6678899999999998765443222 222222 111 1244778888876 55544432110000
Q ss_pred --CCCCCcchhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 327 --AVPPIGDRVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 327 --~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
.+..-.........+.+-.+.+. .++..|++.|++++|+..+|.+
T Consensus 258 ~~~i~~~~~~~~~~~~~~~l~~Li~---~cl~~dP~~RPs~~~il~~L~~ 304 (311)
T d1t46a_ 258 YKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 304 (311)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcccccHHHHHHHH---HHcCCChhHCcCHHHHHHHHHH
Confidence 00000001111223333333333 6788889999999998887754
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-34 Score=278.44 Aligned_cols=154 Identities=23% Similarity=0.327 Sum_probs=127.2
Q ss_pred ccceeecceeccCCceEEEEEEEcCC-CcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc--CCCCeeEEEEEEEe---
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKAT-QKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA--GHPNVIQIVGAYED--- 200 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~--- 200 (489)
.++|+++++||+|+||+||+|++..+ ++.||||++...... ......+.+|+.+|+.|. +|||||+++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc-chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 36799999999999999999999765 667999999764322 222234667888887774 69999999999853
Q ss_pred --CCeEEEEEeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeec
Q 040003 201 --AVAVHVVMELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFG 277 (489)
Q Consensus 201 --~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFG 277 (489)
...+|++||||.++.+...... ...+++..++.++.|++.||+|||++|||||||||+|||+ +..+.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecchh
Confidence 3578999999998877544433 3568999999999999999999999999999999999999 777899999999
Q ss_pred cccccCC
Q 040003 278 LSMFFRP 284 (489)
Q Consensus 278 la~~~~~ 284 (489)
+++....
T Consensus 162 ~~~~~~~ 168 (305)
T d1blxa_ 162 LARIYSF 168 (305)
T ss_dssp SCCCCCG
T ss_pred hhhhhcc
Confidence 9986643
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-34 Score=285.93 Aligned_cols=188 Identities=23% Similarity=0.329 Sum_probs=146.0
Q ss_pred ccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeC-----
Q 040003 127 KEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDA----- 201 (489)
Q Consensus 127 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 201 (489)
.++|+++++||+|+||+||+|+++.+|+.||||++.+.. ......+++.+|+++|++| +|||||+++++|...
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~~ 94 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEE 94 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTTT
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeecccccc
Confidence 467999999999999999999999999999999997643 3455667889999999999 899999999998643
Q ss_pred CeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccc
Q 040003 202 VAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMF 281 (489)
Q Consensus 202 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~ 281 (489)
...+++|+||.||+|.+++. .+++++..++.++.||+.||+|||++|||||||||+|||+ +.++.+|++|||+|..
T Consensus 95 ~~~~~i~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg~a~~ 170 (348)
T d2gfsa1 95 FNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH 170 (348)
T ss_dssp CCCCEEEEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCC----C
T ss_pred CceEEEEEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---cccccccccccchhcc
Confidence 33466677788999999774 4679999999999999999999999999999999999999 7788999999999976
Q ss_pred cCCCCceee----------eeecc-C--CCCcchhHHHHHHHhcccccCCCC
Q 040003 282 FRPGLTFRV----------WLRLH-F--LFFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 282 ~~~~~~~~~----------~~~~~-y--pf~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
......... ..... | .-+.++.++++.+++.|..+|++.
T Consensus 171 ~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~ 222 (348)
T d2gfsa1 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222 (348)
T ss_dssp CTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCC
Confidence 543221110 11111 1 112245577777888887777643
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-35 Score=273.52 Aligned_cols=233 Identities=21% Similarity=0.232 Sum_probs=165.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCeEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AVAVHV 206 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~l 206 (489)
+.|+++++||+|+||.||+|+++ |..||||++++. ...+.+.+|+++|+++ +|||||++++++.+ .+.+|+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~l 78 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 78 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEE
T ss_pred HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-----HHHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEEE
Confidence 45999999999999999999984 678999999643 2346789999999999 89999999999854 567899
Q ss_pred EEeecCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCC
Q 040003 207 VMELCAGGELFDRIIQRG--HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~ 284 (489)
|||||++|+|.+++..++ .+++..+..++.||+.||.|||+++||||||||+|||+ +.++.+||+|||+++....
T Consensus 79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC------
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccceecCC
Confidence 999999999999997653 48999999999999999999999999999999999999 7788999999999987654
Q ss_pred CCceeeeeeccC---------CCCc----chhHHHHHHHhc-ccccCCCCCCCCCC-CCCCCcchhhhhhccHHHHHHHH
Q 040003 285 GLTFRVWLRLHF---------LFFQ----KQRQSVLQTRLV-RNLNEPGSLWPDKV-AVPPIGDRVIAESLSEEEIAGLK 349 (489)
Q Consensus 285 ~~~~~~~~~~~y---------pf~~----~~~~~~~~~i~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 349 (489)
..... ..+..| ++.. ++.+.++.+++. |.+.+......+.. .+.+.....+....+++-.+-+.
T Consensus 156 ~~~~~-~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~ 234 (262)
T d1byga_ 156 TQDTG-KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 234 (262)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHH
T ss_pred CCccc-cccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence 32221 111112 2221 245778888886 67666543221110 11111111122333443333333
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 350 EMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 350 ~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
++++.|+..|++..|+.+.|+.+
T Consensus 235 ---~cl~~dP~~Rps~~~l~~~L~~i 257 (262)
T d1byga_ 235 ---NCWHLDAAMRPSFLQLREQLEHI 257 (262)
T ss_dssp ---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHcccCHhHCcCHHHHHHHHHHH
Confidence 67899999999999998888664
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.2e-33 Score=270.35 Aligned_cols=238 Identities=22% Similarity=0.224 Sum_probs=171.3
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|+++++||+|+||+||+|++..+|+.||||++...... ..+.+|+++++.+.+|++|+.+.+++.+....++|
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~iv 81 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC-----HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEE
Confidence 4699999999999999999999999999999998754322 35778999999995455567777778889999999
Q ss_pred EeecCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCCC
Q 040003 208 MELCAGGELFDRIIQ-RGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPGL 286 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~~ 286 (489)
||||. ++|.+.+.. .+.+++..+..++.|++.||+|||++|||||||||+|||+...+....+||+|||+|+.+....
T Consensus 82 me~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (299)
T d1ckia_ 82 MELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 (299)
T ss_dssp EECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred EEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence 99995 566665544 5679999999999999999999999999999999999998655667789999999999886543
Q ss_pred cee---------eeeeccC---------CCCc----chhHHHHHHHhcccccCCCCCCCCCCCC-CCCc-------chhh
Q 040003 287 TFR---------VWLRLHF---------LFFQ----KQRQSVLQTRLVRNLNEPGSLWPDKVAV-PPIG-------DRVI 336 (489)
Q Consensus 287 ~~~---------~~~~~~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~-------~~~~ 336 (489)
... .+.+..| ++.. ++.+.++.+++.|..+|........... .+.. ....
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
T d1ckia_ 161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240 (299)
T ss_dssp TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHH
T ss_pred cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHh
Confidence 321 1333334 2322 2457889999999998876543221100 0000 0011
Q ss_pred hhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH
Q 040003 337 AESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR 374 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~ 374 (489)
...++++-.+.+. .++..|++.|.+.+++.+.|+.
T Consensus 241 ~~~~p~~~~~li~---~cl~~~p~~RP~~~~i~~~l~~ 275 (299)
T d1ckia_ 241 CKGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRN 275 (299)
T ss_dssp TTTSCHHHHHHHH---HHHHSCTTCCCCHHHHHHHHHH
T ss_pred ccCCCHHHHHHHH---HHccCChhHCcCHHHHHHHHHH
Confidence 1223333223333 4566788888888887776654
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-33 Score=271.72 Aligned_cols=239 Identities=18% Similarity=0.197 Sum_probs=175.0
Q ss_pred cceeecceeccCCceEEEEEEEcC-----CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCC
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKA-----TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAV 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 202 (489)
+.|+++++||+|+||+||+|.+.. ++..||||++... ........+.+|+.+|+++ +|||||++++++....
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~--~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~ 96 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQ 96 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT--SCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc--cChHHHHHHHHHHHHHHHc-CCCCEeeeeeEEecCC
Confidence 569999999999999999998753 3578999998643 3456667899999999999 8999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeE
Q 040003 203 AVHVVMELCAGGELFDRIIQR----------GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLK 272 (489)
Q Consensus 203 ~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~k 272 (489)
..++|||||.+|+|.+++... ..++...+..++.+++.||.|||+++||||||||+|||+ +.++.+|
T Consensus 97 ~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl---d~~~~~K 173 (308)
T d1p4oa_ 97 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVK 173 (308)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCCEE
T ss_pred ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee---cCCceEE
Confidence 999999999999999988643 236888899999999999999999999999999999999 7788999
Q ss_pred EEeeccccccCCCCceee----eeeccC---------CCC----cchhHHHHHHHhccc-ccCCCCCCCCCC-CCCCCcc
Q 040003 273 TIDFGLSMFFRPGLTFRV----WLRLHF---------LFF----QKQRQSVLQTRLVRN-LNEPGSLWPDKV-AVPPIGD 333 (489)
Q Consensus 273 l~DFGla~~~~~~~~~~~----~~~~~y---------pf~----~~~~~~~~~~i~~~~-~~~~~~~~~~~~-~~~~~~~ 333 (489)
|+|||+|+.+........ .++..| ++. .++.+.++.+++.+. .++......... .+.+...
T Consensus 174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~ 253 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 253 (308)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC
T ss_pred EeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCC
Confidence 999999987754332211 233333 222 234567777777653 444322110000 0000000
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
..+...++..-.+. +-.++..|++.|.+++|+...|+..
T Consensus 254 ~~~p~~~~~~l~~l---i~~cl~~~P~~RPs~~~il~~L~~~ 292 (308)
T d1p4oa_ 254 LDKPDNCPDMLFEL---MRMCWQYNPKMRPSFLEIISSIKEE 292 (308)
T ss_dssp CCCCTTCCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred CCCcccchHHHHHH---HHHHcCCChhHCcCHHHHHHHHHHh
Confidence 11122333332222 2367899999999999998887665
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=9e-33 Score=264.91 Aligned_cols=188 Identities=23% Similarity=0.337 Sum_probs=153.4
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVV 207 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 207 (489)
++|+++++||+|+||+||+|++..+|+.||||++..... ...+.+|+++++.|.+|+||+.+++++.+....|+|
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v 79 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 79 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEE
Confidence 569999999999999999999999999999999865421 235678999999997679999999999999999999
Q ss_pred EeecCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeC--CCCCCeEEEeeccccccCC
Q 040003 208 MELCAGGELFDRIIQRG-HYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQ--QEEAPLKTIDFGLSMFFRP 284 (489)
Q Consensus 208 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~--~~~~~~kl~DFGla~~~~~ 284 (489)
|||| +++|.+++...+ .++...+..++.|++.||+|||++|||||||||+|||+... ...+.+||+|||+|+.+..
T Consensus 80 me~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 80 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred EEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence 9999 689999887654 69999999999999999999999999999999999999542 2356799999999998764
Q ss_pred CCcee---------eeeeccC---------CCCc----chhHHHHHHHhcccccCCCCC
Q 040003 285 GLTFR---------VWLRLHF---------LFFQ----KQRQSVLQTRLVRNLNEPGSL 321 (489)
Q Consensus 285 ~~~~~---------~~~~~~y---------pf~~----~~~~~~~~~i~~~~~~~~~~~ 321 (489)
..... .+++..| ++.. ++.+.++.+++.|.++|....
T Consensus 159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~ 217 (293)
T d1csna_ 159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 217 (293)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCcc
Confidence 32211 1223333 2221 245788999999998887543
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-33 Score=269.48 Aligned_cols=236 Identities=19% Similarity=0.201 Sum_probs=169.2
Q ss_pred eecceeccCCceEEEEEEEcCCC---cEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-CCeEEE
Q 040003 131 SLGRKLGQGQFGTTFLCVEKATQ---KEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED-AVAVHV 206 (489)
Q Consensus 131 ~~~~~lG~G~fg~Vy~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~l 206 (489)
...++||+|+||+||+|++..++ ..||||++.+ .......+++.+|+++|++| +|||||++++++.+ .+..|+
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~l 106 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLV 106 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECC--CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc--ccCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceEE
Confidence 33678999999999999986643 3689999864 34567778999999999999 79999999999865 568999
Q ss_pred EEeecCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccccccCCC
Q 040003 207 VMELCAGGELFDRIIQR-GHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLSMFFRPG 285 (489)
Q Consensus 207 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~~~~~~ 285 (489)
|||||++|+|.+++... ..++...+..++.|++.||.|||+.+|+||||||+|||| +.++.+||+|||+++.....
T Consensus 107 v~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~ 183 (311)
T d1r0pa_ 107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDK 183 (311)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTT
T ss_pred EEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhcccc
Confidence 99999999999988754 357788899999999999999999999999999999999 77889999999999977544
Q ss_pred Cceee------eeeccC---------CCC----cchhHHHHHHHhcccccCCCCCCCCCC--CCCCCcchhhhhhccHHH
Q 040003 286 LTFRV------WLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPGSLWPDKV--AVPPIGDRVIAESLSEEE 344 (489)
Q Consensus 286 ~~~~~------~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 344 (489)
..... ..+..| .+. -++.+.++.+++.+..++......... .+..-.....+...+.+
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~- 262 (311)
T d1r0pa_ 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP- 262 (311)
T ss_dssp TCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHH-
T ss_pred ccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHH-
Confidence 32211 111112 222 224577888888877666543221110 00000000111223332
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
+..+ +.+++..|++.|+++.|+...|..+
T Consensus 263 l~~l--i~~cl~~dP~~RPs~~ei~~~L~~i 291 (311)
T d1r0pa_ 263 LYEV--MLKCWHPKAEMRPSFSELVSRISAI 291 (311)
T ss_dssp HHHH--HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHH--HHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 2222 3478899999999999988776554
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-33 Score=275.71 Aligned_cols=187 Identities=20% Similarity=0.325 Sum_probs=143.3
Q ss_pred cccceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEe-----
Q 040003 126 LKEMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYED----- 200 (489)
Q Consensus 126 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 200 (489)
+.++|+++++||+|+||+||+|+++.+|+.||||++.+.. .......++.+|+.+|+++ +|||||+++++|..
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~ 92 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLE 92 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh-cCHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEecccccc
Confidence 3467999999999999999999999999999999997654 3456677899999999999 89999999999953
Q ss_pred -CCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEEeeccc
Q 040003 201 -AVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTIDFGLS 279 (489)
Q Consensus 201 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla 279 (489)
..++|+|||||.++ +.+.+ ...+++..++.+++||+.||+|||++||+||||||+|||+ +.++.+|++|||++
T Consensus 93 ~~~~~~iv~Ey~~~~-l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~---~~~~~~kl~df~~~ 166 (355)
T d2b1pa1 93 EFQDVYLVMELMDAN-LCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA 166 (355)
T ss_dssp TCCEEEEEEECCSEE-HHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC-
T ss_pred cCceeEEEEeccchH-HHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc---ccccceeeechhhh
Confidence 47899999999765 54444 3579999999999999999999999999999999999999 67788999999999
Q ss_pred cccCCCCceee-eeeccC---------C----CCcchhHHHHHHHhcccccCCCC
Q 040003 280 MFFRPGLTFRV-WLRLHF---------L----FFQKQRQSVLQTRLVRNLNEPGS 320 (489)
Q Consensus 280 ~~~~~~~~~~~-~~~~~y---------p----f~~~~~~~~~~~i~~~~~~~~~~ 320 (489)
+.......... ..+..| + -+.++.++++.+++.|.++|++.
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~ 221 (355)
T d2b1pa1 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_dssp --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCC
Confidence 87765443322 222222 1 22245577888888888887643
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=5.9e-32 Score=260.27 Aligned_cols=235 Identities=18% Similarity=0.123 Sum_probs=165.1
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHH--HHHHHHHHhcCCCCeeEEEEEEEeCC---
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVR--REIRIMHHLAGHPNVIQIVGAYEDAV--- 202 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~--~E~~~l~~l~~hpniv~~~~~~~~~~--- 202 (489)
+.|.+.++||+|+||.||+|++ +|+.||||++.... .+... +|+..+..+ +|||||++++++.+.+
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~ 73 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSS
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc------hhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcc
Confidence 4689999999999999999986 68899999986431 23333 445555567 7999999999997654
Q ss_pred -eEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeecCCCCCCEeeeeCCCCCCeEE
Q 040003 203 -AVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHS--------LGVMHRDLKPENFLFINQQEEAPLKT 273 (489)
Q Consensus 203 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~--------~~iiHrDlKp~Nill~~~~~~~~~kl 273 (489)
.+|+|||||.+|+|.+++.+. .++......++.+++.||.|||+ +|||||||||+|||| +.++.+||
T Consensus 74 ~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~Kl 149 (303)
T d1vjya_ 74 TQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCI 149 (303)
T ss_dssp EEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEEE
T ss_pred eEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeEE
Confidence 689999999999999999654 68899999999999999999996 599999999999999 77889999
Q ss_pred EeeccccccCCCCceee------eeeccC--C-------------C----CcchhHHHHHHHhcccccCCCCCCCCCC--
Q 040003 274 IDFGLSMFFRPGLTFRV------WLRLHF--L-------------F----FQKQRQSVLQTRLVRNLNEPGSLWPDKV-- 326 (489)
Q Consensus 274 ~DFGla~~~~~~~~~~~------~~~~~y--p-------------f----~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 326 (489)
+|||+++.+........ +.+..| | + +-++.+.++.+++.|...+.........
T Consensus 150 ~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~ 229 (303)
T d1vjya_ 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT
T ss_pred EecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchh
Confidence 99999998765443221 333334 1 1 1234578889999887655322111100
Q ss_pred -C--------------CCCCcchhhhhhc-cHHHHHHHHHH-HhhhcCCCCCCccHHHHHHHHHHh
Q 040003 327 -A--------------VPPIGDRVIAESL-SEEEIAGLKEM-FKMIDTDNSGYITLEELKKGLQRV 375 (489)
Q Consensus 327 -~--------------~~~~~~~~~~~~~-~~~~~~~l~~~-F~~~D~d~~g~i~~~el~~~l~~l 375 (489)
. ........+.... +.+....+.++ -+++..|+..|++..|+...|.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i 295 (303)
T d1vjya_ 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred hcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 0 0000000011111 11222334333 367788888899999988777665
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1.8e-26 Score=227.73 Aligned_cols=187 Identities=20% Similarity=0.300 Sum_probs=138.7
Q ss_pred cceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhc----------CCCCeeEEEEE
Q 040003 128 EMYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLA----------GHPNVIQIVGA 197 (489)
Q Consensus 128 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~----------~hpniv~~~~~ 197 (489)
.+|+++++||+|+||+||+|+++.+|+.||||++++. ....+.+.+|+.+|+.+. .|+|||+++++
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~----~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~ 88 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 88 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc----ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence 3599999999999999999999999999999999753 334467788999998873 35889999988
Q ss_pred EEe--CCeEEEEEeecCCCchHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEeeeeCCCC---
Q 040003 198 YED--AVAVHVVMELCAGGELFDRII---QRGHYTERKAADLTRIIVGVVEACHS-LGVMHRDLKPENFLFINQQEE--- 268 (489)
Q Consensus 198 ~~~--~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~iiHrDlKp~Nill~~~~~~--- 268 (489)
+.. ....+++|+++..+....... ....+++..++.++.||+.||.|||+ .||+||||||+||||...+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence 754 456777777776654433332 23578999999999999999999998 899999999999999543221
Q ss_pred CCeEEEeeccccccCCCCceeeeeeccC---------CCC----cchhHHHHHHHhcccccCCC
Q 040003 269 APLKTIDFGLSMFFRPGLTFRVWLRLHF---------LFF----QKQRQSVLQTRLVRNLNEPG 319 (489)
Q Consensus 269 ~~~kl~DFGla~~~~~~~~~~~~~~~~y---------pf~----~~~~~~~~~~i~~~~~~~~~ 319 (489)
..+||+|||.|......... .+.+..| ++. .++.++++.+++.|+..|..
T Consensus 169 ~~~kl~dfg~s~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~ 231 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDEHYTN-SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 231 (362)
T ss_dssp EEEEECCCTTCEETTBCCCS-CCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ceeeEeeccccccccccccc-ccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCC
Confidence 24999999999866433221 1122222 121 23457788888888887754
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=2e-25 Score=199.65 Aligned_cols=139 Identities=22% Similarity=0.283 Sum_probs=108.6
Q ss_pred eeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCC-----C----------HHHHHHHHHHHHHHHHhcCCCCeeEE
Q 040003 130 YSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLT-----T----------EEDVEDVRREIRIMHHLAGHPNVIQI 194 (489)
Q Consensus 130 y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~-----~----------~~~~~~~~~E~~~l~~l~~hpniv~~ 194 (489)
|.++++||+|+||+||+|++. +|+.||||+++..... . ........+|+..|.++ .|.+++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcceE
Confidence 568899999999999999875 7899999987532110 0 11123456789999999 79999998
Q ss_pred EEEEEeCCeEEEEEeecCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEeeeeCCCCCCeEEE
Q 040003 195 VGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLTRIIVGVVEACHSLGVMHRDLKPENFLFINQQEEAPLKTI 274 (489)
Q Consensus 195 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iiHrDlKp~Nill~~~~~~~~~kl~ 274 (489)
+++.. .+++|||+.+..+.+ ++...+..++.|++.+|.|||++||+||||||+|||+. + ..++|+
T Consensus 80 ~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~---~-~~~~li 144 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS---E-EGIWII 144 (191)
T ss_dssp EEEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE---T-TEEEEC
T ss_pred EEecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee---C-CCEEEE
Confidence 76532 379999998876532 45556778999999999999999999999999999994 2 349999
Q ss_pred eeccccccCCC
Q 040003 275 DFGLSMFFRPG 285 (489)
Q Consensus 275 DFGla~~~~~~ 285 (489)
|||+|+.....
T Consensus 145 DFG~a~~~~~~ 155 (191)
T d1zara2 145 DFPQSVEVGEE 155 (191)
T ss_dssp CCTTCEETTST
T ss_pred ECCCcccCCCC
Confidence 99999876543
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.91 E-value=2.3e-24 Score=182.94 Aligned_cols=138 Identities=23% Similarity=0.530 Sum_probs=125.8
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhhHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQRED 418 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~~~ 418 (489)
++++++.+++++|..+|.|++|.|+..||..+|+.+|..+++.++..++. +++|.|+|+||+..+... .....++
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~ 76 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE 76 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence 57889999999999999999999999999999999999999999998885 567899999999988654 3344578
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
.+..+|+.||.|++|+|+.+||+.+|..+| +++++++++++.+|.| +|+|+|+||+++|+..+
T Consensus 77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~~ 141 (142)
T d1wdcb_ 77 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSG 141 (142)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSC
T ss_pred hHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcCC
Confidence 899999999999999999999999999998 8899999999999998 69999999999998754
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.91 E-value=5.1e-24 Score=181.74 Aligned_cols=141 Identities=38% Similarity=0.693 Sum_probs=131.3
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~~ 417 (489)
.++.+++.+|+++|..+|.|++|+|+.+||..++...+..++...+..+++.+|.+++|.|+|+||+..+.... .....
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 81 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 81 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence 57889999999999999999999999999999999999999999999999999999999999999998875433 33456
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
+.++.+|+.+|.|++|+|+.+||+.++..+| +++++++++|+.+|.|+||+|+|+||+++|.
T Consensus 82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 7899999999999999999999999999998 7899999999999999999999999999985
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=7.6e-24 Score=180.65 Aligned_cols=142 Identities=34% Similarity=0.627 Sum_probs=131.5
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~ 416 (489)
.+++++++.+++++|+.+|.|++|+|+.+||+.+|...|..+++.++..++..++.++.+.++|++|+..+.... ....
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 81 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence 468899999999999999999999999999999999999999999999999999999999999999998876543 3345
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.++.+|+.||+|++|+|+.+||+.+|..+| +++++++++++.+| |+||+|+|+||+++|.+
T Consensus 82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k 146 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 146 (146)
T ss_dssp HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence 77899999999999999999999999999998 78999999999999 99999999999999863
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.89 E-value=3e-23 Score=178.11 Aligned_cols=141 Identities=25% Similarity=0.443 Sum_probs=125.0
Q ss_pred ccHHHHHHHHHHHhhhcC--CCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh--hh
Q 040003 340 LSEEEIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK--IQ 415 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~--d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~--~~ 415 (489)
++++++++++++|..||. |++|+|+..||+.+|+.+|..+++.++..+. ..|.+++|.|+|+||+.++..... ..
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~ 79 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG 79 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence 578899999999999995 8899999999999999999999999998764 568889999999999998865432 34
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCC--CCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQD--NDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d--~dG~I~~~eF~~~~~~~ 481 (489)
..+.+..+|+.||.|++|+|+.+||+.+|..+| +++++++++++.+|.+ ++|+|+|+||+++|...
T Consensus 80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~ 149 (152)
T d1wdcc_ 80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 149 (152)
T ss_dssp CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred HHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcC
Confidence 467899999999999999999999999999998 7899999999999864 56899999999998754
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=6.8e-23 Score=173.49 Aligned_cols=138 Identities=30% Similarity=0.607 Sum_probs=128.0
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-hhhhHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-KIQREDH 419 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~~~~~~~ 419 (489)
++++..+|+++|..+|.|++|+|+..||..+++..+..++...+..++..+|.+++|.|+|+||+..+.... .....+.
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 80 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence 467888999999999999999999999999999999999999999999999999999999999998886543 3344678
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+..+|..+|.+++|.|+.+||+.++..+| ++++++..+|+.+|.|+||+|+|+||+++|
T Consensus 81 l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 99999999999999999999999999998 789999999999999999999999999987
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.89 E-value=9.5e-23 Score=176.96 Aligned_cols=143 Identities=36% Similarity=0.645 Sum_probs=130.7
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh----h
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN----K 413 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~----~ 413 (489)
..++.+++.+|+++|..+|.|++|+|+.+||+.+|...+..+++.++..++..+|.+++|.++|.||+..+.... .
T Consensus 12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~ 91 (162)
T d1topa_ 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAK 91 (162)
T ss_dssp HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcc
Confidence 467889999999999999999999999999999999999999999999999999999999999999988775432 2
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
....+.++.+|+.+|.|++|+|+.+||+.+|...| .++++++.+|+.+|.|+||+|+|+||+++|..
T Consensus 92 ~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 92 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 23456788999999999999999999999999887 67999999999999999999999999999974
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.89 E-value=7.1e-23 Score=176.61 Aligned_cols=144 Identities=33% Similarity=0.607 Sum_probs=130.0
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCC-CCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh---
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDN-SGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL--- 411 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~-~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~--- 411 (489)
..+.++++++.+++++|..+|.|+ +|.|+..||..+|+.+|..++..++..++..++.+++|.+++++|...+...
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 83 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence 345789999999999999999996 8999999999999999999999999999999999999999999998766542
Q ss_pred -hhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 412 -NKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 412 -~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.....++.+..+|+.||.|++|+|+.+||++++..+| +++++++++|+.+|.|+||+|+|+||+++|+
T Consensus 84 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 84 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 2234567899999999999999999999999999887 7899999999999999999999999999996
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.88 E-value=9.4e-23 Score=173.55 Aligned_cols=134 Identities=21% Similarity=0.446 Sum_probs=119.2
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC--CCcceehHHHHHHHHHhh---hhhhHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDID--NSGTMDYGEFIAAMLHLN---KIQREDH 419 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d--~~g~I~f~eF~~~~~~~~---~~~~~~~ 419 (489)
.++++++|..+|.|++|+|+.+||..+|+.+|..++..++..++..++.+ ++|.|+|+||+..+.... .....+.
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 82 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED 82 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence 46789999999999999999999999999999999999999999887665 578999999998875432 2234667
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
+..+|+.||.|++|+|+.+||+.+|..+| +++++++.+++. |.|+||+|+|+||+++|.
T Consensus 83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll 143 (145)
T d2mysc_ 83 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 143 (145)
T ss_pred HHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence 89999999999999999999999999998 789999999975 889999999999999875
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.88 E-value=4.1e-24 Score=189.24 Aligned_cols=144 Identities=69% Similarity=1.143 Sum_probs=133.6
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
..++++++..|+++|+.+|.|++|+|+.+||..+|+.++..++..++..++..+|.+++|.|+|++|+.++........+
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence 35677888899999999999999999999999999999999999999999999999999999999999887665555556
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+..+|+.+|.|++|+|+.+||+.+++.+|+++++++.||+.+|.|+||+|+|+||+++|++.
T Consensus 82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~ 145 (182)
T d1s6ia_ 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR 145 (182)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred HHHHHHHHHHhhcCCCccchhhhhhhhhhcCccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhC
Confidence 6788999999999999999999999999999999999999999999999999999999999865
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.87 E-value=2.5e-22 Score=170.83 Aligned_cols=139 Identities=23% Similarity=0.407 Sum_probs=121.0
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh-hhhhhHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL-NKIQRED 418 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~-~~~~~~~ 418 (489)
++++++.+++++|..+|.+++|+|+.+||..+|+.+|...+..+. +..++.+.+|.|+|+||+..+... .....++
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~---~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~ 77 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE---LDAMIKEASGPINFTVFLTMFGEKLKGADPED 77 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHH---HHHHHHhccCceeechhhhhhhhcccccchHH
Confidence 467899999999999999999999999999999999976554433 333445778999999999987543 3445567
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+..+|+.||.|++|+|+.+||+.+|+.+| +++++++++++.+|.|+||+|+|.||+++|...
T Consensus 78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~ 142 (145)
T d2mysb_ 78 VIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 142 (145)
T ss_pred HHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccC
Confidence 899999999999999999999999999999 789999999999999999999999999999754
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.87 E-value=1e-22 Score=172.06 Aligned_cols=130 Identities=24% Similarity=0.453 Sum_probs=116.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---hhhhHHHHHh
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---KIQREDHMYA 422 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---~~~~~~~l~~ 422 (489)
.+++++|..+|.|++|+|+..||..+|+.+|.+++..++..+ +.+++|.|+|+||+..+.... .....+.+..
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 457899999999999999999999999999999999988765 457889999999999885432 2234677999
Q ss_pred hcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+|+.||+|++|+|+.+||+.+|..+| +++++++++++.+|.| ||+|+|+||+++|..
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred HHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence 99999999999999999999999987 7999999999999988 999999999999864
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=3.2e-22 Score=170.39 Aligned_cols=133 Identities=21% Similarity=0.474 Sum_probs=116.4
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHc-cCCCCCcceehHHHHHHHHHhhh------hhhHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQA-GDIDNSGTMDYGEFIAAMLHLNK------IQREDHM 420 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~-~D~d~~g~I~f~eF~~~~~~~~~------~~~~~~l 420 (489)
++++|..+|.|++|.|+.+||..+|+.+|..++..++..++.. .+.+.+|.|+|+||+..+..... ....+.+
T Consensus 4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l 83 (146)
T d1m45a_ 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF 83 (146)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHH
Confidence 5678999999999999999999999999999999999999975 45566789999999988754321 2335679
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+|+.||.|++|+|+.+||+.+|..+| ++++++.+++..+|.|+||+|+|+||+..|.+
T Consensus 84 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 84 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 9999999999999999999999999998 78999999999999999999999999988764
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.86 E-value=6.4e-22 Score=165.79 Aligned_cols=128 Identities=22% Similarity=0.372 Sum_probs=115.6
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---hhhhHHHHHhhcc
Q 040003 349 KEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---KIQREDHMYAAFS 425 (489)
Q Consensus 349 ~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---~~~~~~~l~~~F~ 425 (489)
..+|+.+|.|++|.|+..||..++..++...++.++..+++.+|.+++|.|+|+||+..+.... .......++.+|+
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~ 82 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK 82 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999999999999999999999999998875432 2234567889999
Q ss_pred cccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 426 YFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
.+|.|++|+|+.+||+.++..++ .+++.++|+.+|.|+||+|+|+||+++|
T Consensus 83 ~~D~~~~g~i~~~el~~~~~~~~--~~~~~~~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 83 LMDVDGDGKLTKEEVTSFFKKHG--IEKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHCCSSSSEEEHHHHHHHHTTTT--CHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ccccccCCcccHHHHHHHHHhcC--cHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence 99999999999999999998766 4678899999999999999999999987
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.86 E-value=4.2e-22 Score=176.15 Aligned_cols=130 Identities=24% Similarity=0.427 Sum_probs=120.4
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
++|+++|+.+|.|++|+|+.+||..+|+.+|..++..++..++..+|.|++|.|+|+||+..+.. ...+..+|+
T Consensus 18 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~------~~~~~~~F~ 91 (182)
T d1y1xa_ 18 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGFR 91 (182)
T ss_dssp SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc------ccccccchh
Confidence 46899999999999999999999999999999999999999999999999999999999887643 345678999
Q ss_pred cccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 426 YFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
.+|.|++|+|+.+||+.+|..+| +++++++.+++.+|.|+||.|+|+||+.+|...
T Consensus 92 ~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l 149 (182)
T d1y1xa_ 92 KRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV 149 (182)
T ss_dssp HHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred ccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999988 689999999999999999999999999998644
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.84 E-value=2.8e-21 Score=172.03 Aligned_cols=149 Identities=23% Similarity=0.355 Sum_probs=124.8
Q ss_pred ccHHHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHH
Q 040003 340 LSEEEIAGLKEMFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRED 418 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~ 418 (489)
.+.....+|+++|+.|..+ ++|+|+.+||+.+|...+...+...++.+|+.+|.|++|.|+|.||+.++........++
T Consensus 15 ~~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~ 94 (189)
T d1jbaa_ 15 VGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEH 94 (189)
T ss_dssp CCHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTH
T ss_pred cCccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHH
Confidence 3444555566666665444 689999999999999888888999999999999999999999999999998776666788
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC------------------CC-HHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG------------------LD-DTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------------------~~-~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.++.+|+.||.|++|.|+.+|+..++..+. +. ++.++.+|+.+|.|+||+|+|+||+.+|+
T Consensus 95 ~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~ 174 (189)
T d1jbaa_ 95 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 174 (189)
T ss_dssp HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT
T ss_pred HHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 899999999999999999999998875431 12 45678999999999999999999999999
Q ss_pred hCCCCcccc
Q 040003 480 DSGLGKKVF 488 (489)
Q Consensus 480 ~~~~~~~~f 488 (489)
+++...+++
T Consensus 175 ~~p~i~~~l 183 (189)
T d1jbaa_ 175 RDKWVMKML 183 (189)
T ss_dssp TTTTHHHHH
T ss_pred hCHHHHHHh
Confidence 887665543
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.1e-21 Score=165.58 Aligned_cols=130 Identities=21% Similarity=0.431 Sum_probs=113.8
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCC--CCCcceehHHHHHHHHHhh---hhhhHHHHHh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI--DNSGTMDYGEFIAAMLHLN---KIQREDHMYA 422 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~--d~~g~I~f~eF~~~~~~~~---~~~~~~~l~~ 422 (489)
++++|..+|.+++|.|+.+||..+|+.+|..+++.++..++..++. +++|.|+|.||+..+.... .....+.+..
T Consensus 2 ~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~~ 81 (139)
T d1w7jb1 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLE 81 (139)
T ss_dssp HHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHH
T ss_pred HHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHHH
Confidence 6899999999999999999999999999999999999999988774 5789999999998875432 2233456889
Q ss_pred hcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+|+.+|+|++|+|+.+||+.+|..+| +++++++.|+.. |.|+||+|+|+||+++|
T Consensus 82 aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 82 GFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp HHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred hhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 99999999999999999999999998 789999999975 88999999999999876
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=2.3e-21 Score=171.12 Aligned_cols=138 Identities=24% Similarity=0.387 Sum_probs=121.9
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHh
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYA 422 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~ 422 (489)
+..+|..+|+.+|.|++|+|+.+||+.+|+.++.. .+..+++.+++.+|.|++|.|+|+||+..+... ..++.
T Consensus 17 ~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~ 90 (181)
T d1hqva_ 17 DQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQN 90 (181)
T ss_dssp CHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHH
T ss_pred cHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------ccccc
Confidence 45679999999999999999999999999888754 688999999999999999999999999887543 35678
Q ss_pred hcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCccc
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~ 487 (489)
+|+.+|.|++|+|+.+||+.++...| +++++++++++.+|.+++|+|+|+||+.++.+.....++
T Consensus 91 ~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~ 157 (181)
T d1hqva_ 91 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 157 (181)
T ss_dssp HHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887 789999999999999999999999999888654333333
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.1e-20 Score=164.23 Aligned_cols=144 Identities=28% Similarity=0.493 Sum_probs=121.7
Q ss_pred hhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh-h
Q 040003 336 IAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK-I 414 (489)
Q Consensus 336 ~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~-~ 414 (489)
+...++++++.+|+++|+.+|.|++|+|+.+||+.++...... .++.++..+|.+++|.|+|+||+..+..... .
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~~----~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~ 81 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 81 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTCT----THHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCCH----HHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence 4567999999999999999999999999999998876554432 3567899999999999999999998876543 3
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHc-C--CC----HHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQF-G--LD----DTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g--~~----~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
...+.++.+|+.+|.|++|+|+.+||..+++.. + ++ +..+..+|+++|.|+||+|+|+||+++|+...+
T Consensus 82 ~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~~~ 157 (165)
T d1auib_ 82 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI 157 (165)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGGCG
T ss_pred hhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcCCh
Confidence 446678999999999999999999999999664 3 33 455788999999999999999999999985543
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=1.3e-20 Score=166.39 Aligned_cols=150 Identities=25% Similarity=0.381 Sum_probs=129.9
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC-CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL-MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~-~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..++.+++..+++.|.. .+++|.|+..||..+|..++... ....+++++..+|.+++|.|+|+||+.++........
T Consensus 16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 46888999999988854 46789999999999998887554 4566789999999999999999999999987777777
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc--------------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF--------------GLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~--------------g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+++++.+|+.||.|++|+|+.+|+..++..+ .+.++.++.+|+.+|.|+||.|+|+||++++.+.+
T Consensus 94 ~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p 173 (181)
T d1bjfa_ 94 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDP 173 (181)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence 8899999999999999999999999999754 13456789999999999999999999999999888
Q ss_pred CCccccC
Q 040003 483 LGKKVFK 489 (489)
Q Consensus 483 ~~~~~f~ 489 (489)
-..+++|
T Consensus 174 ~~~~~l~ 180 (181)
T d1bjfa_ 174 SIVRLLQ 180 (181)
T ss_dssp HHHHTTC
T ss_pred HHHHHhC
Confidence 7666654
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.82 E-value=5.8e-20 Score=162.43 Aligned_cols=151 Identities=25% Similarity=0.386 Sum_probs=128.2
Q ss_pred hhhccHHHHHHHHHHHhhhcCC--CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-h
Q 040003 337 AESLSEEEIAGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-K 413 (489)
Q Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d--~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-~ 413 (489)
...++.+++..|++.|..+|.+ ++|.|+.+||+.++..++.... ..++.+|+.+|.|++|.|+|+||+.++.... .
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~ 86 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPN 86 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc
Confidence 3578999999999999999876 6999999999999987776654 4678999999999999999999999887654 3
Q ss_pred hhhHHHHHhhcccccccCCCcccHHHHHHHHHHc----C--CCHHH----HHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 414 IQREDHMYAAFSYFDKDGSGYITPDELQTACQQF----G--LDDTQ----LEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 414 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g--~~~~~----~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
...+++++.+|+.||.|++|+|+.+|++.++... + +++.+ ++.+|+++|.|+||+|+|+||..++.+.+.
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 166 (183)
T d2zfda1 87 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPS 166 (183)
T ss_dssp SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred CcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCHH
Confidence 4567789999999999999999999999987543 3 45544 566789999999999999999999998877
Q ss_pred Ccccc
Q 040003 484 GKKVF 488 (489)
Q Consensus 484 ~~~~f 488 (489)
..+.|
T Consensus 167 ~~~~~ 171 (183)
T d2zfda1 167 LLKNM 171 (183)
T ss_dssp GGGGG
T ss_pred HHHHc
Confidence 66644
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.2e-20 Score=163.20 Aligned_cols=132 Identities=24% Similarity=0.366 Sum_probs=112.9
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC-----CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANL-----MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYA 422 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~-----~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~ 422 (489)
+..+|+.+ .+.+|+|+.+||+.+|+.+|.+. +.+.++.++..+|.|++|.|+|+||+.++.. ...++.
T Consensus 2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~------~~~~~~ 74 (165)
T d1k94a_ 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKE 74 (165)
T ss_dssp HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHH
T ss_pred hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhc------cchhHH
Confidence 35677777 57899999999999999998754 5678899999999999999999999987753 345778
Q ss_pred hcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcccc
Q 040003 423 AFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVF 488 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~f 488 (489)
+|+.||+|++|+|+.+||+.+|+.+| +++.+++.+++.+|. ||.|+|+||+.+|.+...+.++|
T Consensus 75 ~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F 140 (165)
T d1k94a_ 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKLRALTDFF 140 (165)
T ss_dssp HHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 689999999999975 58999999999887654444444
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=5.1e-20 Score=163.41 Aligned_cols=147 Identities=18% Similarity=0.241 Sum_probs=125.3
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCH-HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMD-SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~-~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
.++..++..+++.|... +++|.++..+|..++..++..... ..++.+|..+|.+++|.|+|+||+.++........+
T Consensus 18 ~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~ 95 (187)
T d1g8ia_ 18 YFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLD 95 (187)
T ss_dssp SSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchh
Confidence 47888998888888655 568999999999999998866544 455789999999999999999999999877766778
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--------------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--------------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--------------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
++++.+|+.||.|++|+|+.+|+..++..+. ..++.++.+|+++|.|+||+|+|+||++++.+.+.
T Consensus 96 e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 175 (187)
T d1g8ia_ 96 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS 175 (187)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHH
T ss_pred hhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHH
Confidence 8899999999999999999999999986431 12466889999999999999999999999998766
Q ss_pred Cccc
Q 040003 484 GKKV 487 (489)
Q Consensus 484 ~~~~ 487 (489)
..+.
T Consensus 176 ~~~~ 179 (187)
T d1g8ia_ 176 IVQA 179 (187)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.81 E-value=3.6e-20 Score=166.44 Aligned_cols=147 Identities=20% Similarity=0.284 Sum_probs=124.0
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC-CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL-MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~-~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..++..++..+++.|. +.+++|.|+.+||+.+|..++... ....++.+|+.+|.|++|.|+|.||+.++........
T Consensus 20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~ 97 (201)
T d1omra_ 20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97 (201)
T ss_dssp CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence 3578889999988884 446789999999999999998654 4566789999999999999999999999887776677
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--C--------------CHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--L--------------DDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~--------------~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+++++.+|+.||.|++|+|+.+|+..+++.+. + .+..++.+|+.+|.|+||+|+|+||+..+..
T Consensus 98 ~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 177 (201)
T d1omra_ 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177 (201)
T ss_dssp GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 78899999999999999999999999987542 1 1345788999999999999999999999887
Q ss_pred CCCCcc
Q 040003 481 SGLGKK 486 (489)
Q Consensus 481 ~~~~~~ 486 (489)
++...+
T Consensus 178 ~~~~~~ 183 (201)
T d1omra_ 178 NKEILR 183 (201)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 654433
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=5.5e-20 Score=163.56 Aligned_cols=147 Identities=23% Similarity=0.267 Sum_probs=126.1
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCC-HHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLM-DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~-~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
.++..++..+++.|... +++|.++..||..++..++.... ...++.+|+.+|.+++|.|+|+||+.++........+
T Consensus 21 ~fs~~Ei~~l~~~F~~~--~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~ 98 (190)
T d1fpwa_ 21 YFDRREIQQWHKGFLRD--CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE 98 (190)
T ss_dssp CSTHHHHHHHHHHHHHH--CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST
T ss_pred CCCHHHHHHHHHHHHHH--CCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchH
Confidence 57889999999988544 56899999999999999875544 4557899999999999999999999998877766778
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--------C------CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--------L------DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--------~------~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
++++.+|+.||.|++|.|+.+|+..++..+. . .++.++++|+.+|.|+||+|+|+||+.+++..+.
T Consensus 99 e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~ 178 (190)
T d1fpwa_ 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPS 178 (190)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTT
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCHH
Confidence 8999999999999999999999999997542 1 1467889999999999999999999999998776
Q ss_pred Cccc
Q 040003 484 GKKV 487 (489)
Q Consensus 484 ~~~~ 487 (489)
..+.
T Consensus 179 i~~~ 182 (190)
T d1fpwa_ 179 IIGA 182 (190)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.80 E-value=2.4e-20 Score=165.36 Aligned_cols=135 Identities=23% Similarity=0.302 Sum_probs=114.7
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC--------CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN--------LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQRE 417 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~--------~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~ 417 (489)
+.++.+|..+| |++|.|+..||..+|..+|.. .+...+..++..+|.|++|.|+|+||+.++...
T Consensus 18 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------ 90 (186)
T d1df0a1 18 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI------ 90 (186)
T ss_dssp HHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHH------
T ss_pred HHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhH------
Confidence 45889999998 899999999999999887543 467789999999999999999999999877543
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCcccc
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKVF 488 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~f 488 (489)
..+..+|+.||+|++|+|+.+||+.+|+.+| ++++. .+++..+|.|++|+|+|+||+.+|.+...+.++|
T Consensus 91 ~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~-~~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F 162 (186)
T d1df0a1 91 QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQL-HQVIVARFADDELIIDFDNFVRCLVRLEILFKIF 162 (186)
T ss_dssp HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHH-HHHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHH-HHHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999999998 56654 4566678999999999999999987654444444
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.79 E-value=7e-21 Score=168.25 Aligned_cols=142 Identities=25% Similarity=0.340 Sum_probs=102.3
Q ss_pred hccHHHHH-HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC--------CCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 339 SLSEEEIA-GLKEMFKMIDTDNSGYITLEELKKGLQRVGAN--------LMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 339 ~~~~~~~~-~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~--------~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
.++++++. .++++|+.+| +.+|.|+..||+.+|..++.. .+.+.++.++..+|.|++|.|+|+||..++.
T Consensus 12 ~ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~ 90 (188)
T d1qxpa2 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 90 (188)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence 45666654 5899999999 558999999999988766543 3567899999999999999999999998775
Q ss_pred HhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCccc
Q 040003 410 HLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487 (489)
Q Consensus 410 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~ 487 (489)
.+ ..++.+|+.||+|++|+|+..||+.+|..+| ++++.++.|+.. |.|++|.|+|+||+.+|.+...+..+
T Consensus 91 ~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~ 163 (188)
T d1qxpa2 91 RI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVRLEILFKI 163 (188)
T ss_dssp HH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHH
T ss_pred hh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 43 4567899999999999999999999999999 577666666655 67999999999999998655444444
Q ss_pred c
Q 040003 488 F 488 (489)
Q Consensus 488 f 488 (489)
|
T Consensus 164 F 164 (188)
T d1qxpa2 164 F 164 (188)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=5.8e-20 Score=160.90 Aligned_cols=131 Identities=24% Similarity=0.357 Sum_probs=112.5
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC--------CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh
Q 040003 343 EEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN--------LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI 414 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~--------~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~ 414 (489)
+++++++++|..+|.+ +|.|+..||+.+|..+|.. .+.+.+..++..+|.|++|.|+|+||+..+..
T Consensus 1 ee~~~~r~~F~~~d~~-dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~---- 75 (173)
T d1alva_ 1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN---- 75 (173)
T ss_dssp CHHHHHHHHHHHHHGG-GTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH----
T ss_pred ChHHHHHHHHHHHcCC-CCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhh----
Confidence 3678999999999954 8999999999999987643 45688999999999999999999999887743
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
...+..+|+.||.|++|.|+.+||+.+|+..| +++++++.++ .+|.|++|.|+|+||+.+|...
T Consensus 76 --~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~-~~d~d~~G~i~~~EF~~~~~~~ 141 (173)
T d1alva_ 76 --IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII-RRYSDEGGNMDFDNFISCLVRL 141 (173)
T ss_dssp --HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH-HHHTCSSSCBCHHHHHHHHHHH
T ss_pred --hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhh-ccccCCCCeEeHHHHHHHHHHH
Confidence 34567899999999999999999999999988 5677776666 5666999999999999998654
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.78 E-value=3.2e-19 Score=156.90 Aligned_cols=147 Identities=19% Similarity=0.315 Sum_probs=123.0
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC-CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL-MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQR 416 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~-~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~ 416 (489)
..++..++..+++.|... +++|+|+.+||..+|..++... ....+..+|+.+|.|++|.|+|+||+.++........
T Consensus 8 t~ft~~ei~~l~~~F~~~--~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~ 85 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 85 (178)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHHHH--CcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence 467888898888888554 5679999999999999987654 4555689999999999999999999999877766677
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc----C----------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF----G----------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~----g----------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
++++..+|+.||.|++|.|+.+|+..++..+ + ..+..++.+|+.+|.|+||.|+|+||..++.+.+
T Consensus 86 ~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~ 165 (178)
T d1s6ca_ 86 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 165 (178)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCC
T ss_pred HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCH
Confidence 8899999999999999999999998887543 1 1245577899999999999999999999998765
Q ss_pred CCcc
Q 040003 483 LGKK 486 (489)
Q Consensus 483 ~~~~ 486 (489)
-..+
T Consensus 166 ~~~~ 169 (178)
T d1s6ca_ 166 NIMR 169 (178)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.78 E-value=6.4e-19 Score=154.26 Aligned_cols=139 Identities=24% Similarity=0.316 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC----CCCCHH-H----HHHHHHc--cCCCCCcceehHHHHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG----ANLMDS-E----IDGLMQA--GDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg----~~~~~~-~----i~~l~~~--~D~d~~g~I~f~eF~~~~~~ 410 (489)
..+.++++.+|+.+|.|++|.|+.+||..++..++ ...... . ....+.. .+.++++.|+++||+..+..
T Consensus 2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~ 81 (174)
T d2scpa_ 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence 45788999999999999999999999999887653 122111 1 1222222 36778899999999998865
Q ss_pred hhhh-----hhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 411 LNKI-----QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 411 ~~~~-----~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.... .....+..+|+.+|+|++|+|+.+||+.+++.++++.+++..+|+.+|.|+||+|+|+||+.++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 156 (174)
T d2scpa_ 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHH
Confidence 3211 123457889999999999999999999999999999999999999999999999999999998864
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.78 E-value=9.8e-20 Score=161.09 Aligned_cols=141 Identities=18% Similarity=0.322 Sum_probs=117.2
Q ss_pred ccHHHHHHHHHHHhh-hcCCCCCCccHHHHHHHHHHhCC----CCCH-----------HHHHHHHHccCCCCCcceehHH
Q 040003 340 LSEEEIAGLKEMFKM-IDTDNSGYITLEELKKGLQRVGA----NLMD-----------SEIDGLMQAGDIDNSGTMDYGE 403 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~-~D~d~~g~i~~~el~~~l~~lg~----~~~~-----------~~i~~l~~~~D~d~~g~I~f~e 403 (489)
+++.+..+++.+|.. +|.|++|+|+.+||..++..++. .... .....++...|.+++|.|++++
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 677889999999997 59999999999999999877631 1111 1234567778999999999999
Q ss_pred HHHHHHHhhh---------hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHH
Q 040003 404 FIAAMLHLNK---------IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEF 474 (489)
Q Consensus 404 F~~~~~~~~~---------~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF 474 (489)
|+.++..... ......+..+|+.+|.|++|+|+.+||+.+|..+|+++++++.+|..+|.|+||.|+|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f~~~D~d~dG~i~~~EF 161 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRY 161 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHHHHcCCCCCCCCcHHHH
Confidence 9988854321 1123467899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040003 475 VAMMQD 480 (489)
Q Consensus 475 ~~~~~~ 480 (489)
+.++..
T Consensus 162 ~~~~~~ 167 (185)
T d2sasa_ 162 KELYYR 167 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998853
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.3e-19 Score=158.32 Aligned_cols=133 Identities=26% Similarity=0.364 Sum_probs=112.5
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC-----CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANL-----MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHM 420 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~-----~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l 420 (489)
..++..|..++ +++|.|+..||+.+|+++|... +.+++..++..+|.|++|.|+|+||+.++... ...
T Consensus 7 ~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~~ 79 (172)
T d1juoa_ 7 DPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGW 79 (172)
T ss_dssp CTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHH
T ss_pred HHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh------hhh
Confidence 45788999987 7799999999999999998653 57889999999999999999999999877533 345
Q ss_pred HhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCCccc
Q 040003 421 YAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLGKKV 487 (489)
Q Consensus 421 ~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~~~~ 487 (489)
..+|+.||.|++|+|+.+|++.+|..+| ++++++..+++++| .+|.|+|+||+.+|.+...+.++
T Consensus 80 ~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~~~~~~~~~~ 146 (172)
T d1juoa_ 80 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVKLRALTDS 146 (172)
T ss_dssp HHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999988 68999999999885 45789999999888754433333
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.76 E-value=3.3e-18 Score=151.77 Aligned_cols=140 Identities=25% Similarity=0.365 Sum_probs=111.9
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHH-----HHHhCCCCCHHHHHH-----HHHccCCCCCcceehHHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKG-----LQRVGANLMDSEIDG-----LMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~-----l~~lg~~~~~~~i~~-----l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
.++.+++++++|..+|.|++|+|+.+||..+ ++.++...+..++.. .+...+...++.|+++||+..+..
T Consensus 9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~ 88 (189)
T d1qv0a_ 9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 88 (189)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence 5678899999999999999999999999865 455677666555433 345566778899999999988754
Q ss_pred hhh-----------hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 040003 411 LNK-----------IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAM 477 (489)
Q Consensus 411 ~~~-----------~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~ 477 (489)
... ......+..+|+.+|+|++|+|+.+||+.++..+| +++++++.+|+.+|.|+||.|+|+||+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 168 (189)
T d1qv0a_ 89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168 (189)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 321 11234567799999999999999999999999988 78999999999999999999999999999
Q ss_pred HHh
Q 040003 478 MQD 480 (489)
Q Consensus 478 ~~~ 480 (489)
|..
T Consensus 169 ~~~ 171 (189)
T d1qv0a_ 169 HLG 171 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.76 E-value=9.6e-19 Score=139.50 Aligned_cols=99 Identities=31% Similarity=0.545 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--CCHHH
Q 040003 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G--LDDTQ 453 (489)
Q Consensus 379 ~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g--~~~~~ 453 (489)
++.++|.+++..+| .+|.|+|+||+..+.. ....++.++.+|+.||+|++|+|+.+||+.+|+.+ | +++++
T Consensus 6 l~~~di~~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e 81 (109)
T d5pala_ 6 LKADDINKAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTE 81 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHH
T ss_pred ccHHHHHHHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHH
Confidence 56788999998876 4578999999976632 23456789999999999999999999999999876 3 78999
Q ss_pred HHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 454 LEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 454 ~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
++++|+.+|.|+||+|+|+||+++|.++
T Consensus 82 ~~~~~~~~D~d~dG~I~~~EF~~~m~~s 109 (109)
T d5pala_ 82 TKALLAAGDSDHDGKIGADEFAKMVAQA 109 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCCEeHHHHHHHHHhC
Confidence 9999999999999999999999999763
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=4.2e-19 Score=156.03 Aligned_cols=147 Identities=19% Similarity=0.280 Sum_probs=116.1
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCC--------ccHHHHHHHHHHhCCCCCHHHHHHHHHccCCC-CCcceehHHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGY--------ITLEELKKGLQRVGANLMDSEIDGLMQAGDID-NSGTMDYGEFIAAM 408 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~--------i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d-~~g~I~f~eF~~~~ 408 (489)
..++++++..+++.|..++.+++|. ++.++|.... .+..++ ..+++++.+|.+ ++|.|+|+||+.++
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~-~l~~~~---~~~rif~~fd~~~~~g~I~f~EFv~~l 84 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLP-ELKANP---FKERICRVFSTSPAKDSLSFEDFLDLL 84 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSH-HHHTCT---THHHHHHHHCCSTTCCEECHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCc-ccccCh---HHHHHHHhccCCCCCCcCcHHHHHHHH
Confidence 4688999999999999998887765 5566654422 222222 246688888887 68999999999998
Q ss_pred HHhh-hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc-----C--CCHHH----HHHHHHHhcCCCCCceeHHHHHH
Q 040003 409 LHLN-KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF-----G--LDDTQ----LEDIIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 409 ~~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-----g--~~~~~----~~~~~~~~d~d~dG~I~~~eF~~ 476 (489)
.... ....+++++.+|+.||.|++|+|+.+||..+++.+ + +++++ ++.+++++|.|+||+|+|+||++
T Consensus 85 ~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~ 164 (180)
T d1xo5a_ 85 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 164 (180)
T ss_dssp HHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 7664 44667899999999999999999999999999865 1 44433 56689999999999999999999
Q ss_pred HHHhCCCCcccc
Q 040003 477 MMQDSGLGKKVF 488 (489)
Q Consensus 477 ~~~~~~~~~~~f 488 (489)
++.+++-....|
T Consensus 165 ~~~~~P~~~~~f 176 (180)
T d1xo5a_ 165 VISRSPDFASSF 176 (180)
T ss_dssp HHHHCHHHHHHH
T ss_pred HHHhCHHHHhhC
Confidence 999887665554
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.75 E-value=4e-19 Score=171.21 Aligned_cols=141 Identities=23% Similarity=0.360 Sum_probs=122.0
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhh----
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKI---- 414 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~---- 414 (489)
.++.++...++++|..+|.|++|+|+.+||+.+|..+|..++..++..++..+|.|++|.|+|.||+..+......
T Consensus 115 ~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F 194 (321)
T d1ij5a_ 115 MLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADF 194 (321)
T ss_dssp CCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHH
Confidence 5678889999999999999999999999999999999999999999999999999999999999997554211000
Q ss_pred -------------------------------------------------------hhHHHHHhhcccccccCCCcccHHH
Q 040003 415 -------------------------------------------------------QREDHMYAAFSYFDKDGSGYITPDE 439 (489)
Q Consensus 415 -------------------------------------------------------~~~~~l~~~F~~~D~d~~G~I~~~E 439 (489)
.....+..+|..+|.|++|+|+.+|
T Consensus 195 ~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~~E 274 (321)
T d1ij5a_ 195 RKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEE 274 (321)
T ss_dssp HHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHH
T ss_pred HHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcHHH
Confidence 0011234579999999999999999
Q ss_pred HHHHHHHcCC---CHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 440 LQTACQQFGL---DDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 440 l~~~l~~~g~---~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
|+.+|..+|+ +++++..+|+.+|.|+||.|+|+||+++|.
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 275 VQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp HHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999985 467899999999999999999999999986
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.75 E-value=1e-18 Score=139.36 Aligned_cols=99 Identities=25% Similarity=0.486 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc---C--CCHHH
Q 040003 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF---G--LDDTQ 453 (489)
Q Consensus 379 ~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~---g--~~~~~ 453 (489)
++.++|.+++..+| ++|.|+|+||+.++... ...++.++.+|+.||+|++|+|+.+||+.+|+.+ | +++++
T Consensus 6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~e 81 (109)
T d1pvaa_ 6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAE 81 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHH
T ss_pred CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHH
Confidence 46788988888775 56789999999877432 2346778999999999999999999999999876 3 78999
Q ss_pred HHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 454 LEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 454 ~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+++||+.+|.|+||+|+|+||+.+|..+
T Consensus 82 v~~~~~~~D~d~dG~I~~~EF~~~m~~a 109 (109)
T d1pvaa_ 82 TKAFLKAADKDGDGKIGIDEFETLVHEA 109 (109)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCcCcEeHHHHHHHHHhC
Confidence 9999999999999999999999999753
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.75 E-value=8.7e-18 Score=148.66 Aligned_cols=140 Identities=23% Similarity=0.291 Sum_probs=112.8
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH-----hCCCCCHHHHHHH-----HHccCCCCCcceehHHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQR-----VGANLMDSEIDGL-----MQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~-----lg~~~~~~~i~~l-----~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
++.++.+++++|+.+|.|++|+|+.+||..++.. ++..++..++... +.......++.+++.+|+..+..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 4667899999999999999999999999876654 4555555544333 33445566778999999888754
Q ss_pred hhhh-----------hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 040003 411 LNKI-----------QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAM 477 (489)
Q Consensus 411 ~~~~-----------~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~ 477 (489)
.... .....+..+|+.+|+|++|+|+.+||+.+|+.+| +++++++.+++.+|.|+||+|+|+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 3211 1234578899999999999999999999999987 68999999999999999999999999998
Q ss_pred HHh
Q 040003 478 MQD 480 (489)
Q Consensus 478 ~~~ 480 (489)
+..
T Consensus 167 ~~~ 169 (187)
T d1uhka1 167 HLG 169 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.75 E-value=3e-18 Score=149.86 Aligned_cols=138 Identities=20% Similarity=0.333 Sum_probs=114.8
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC----CCCCHHH-----------HHHHHHccCCCCCcceehHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG----ANLMDSE-----------IDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg----~~~~~~~-----------i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
..++|+++|+.+|.|++|+|+.+||+.++..+. ......+ ...++...|.+++|.|++.+++..+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 456789999999999999999999999987753 2332222 2446677889999999999998877
Q ss_pred HHhh--------hhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 409 LHLN--------KIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 409 ~~~~--------~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.... .......+..+|..||.|++|+|+.+||+.+++.+|+++++++.+|..+|.|+||.|+|+||+.+|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 5432 11223567889999999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q 040003 481 S 481 (489)
Q Consensus 481 ~ 481 (489)
.
T Consensus 165 ~ 165 (176)
T d1nyaa_ 165 F 165 (176)
T ss_dssp C
T ss_pred H
Confidence 4
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.69 E-value=2.9e-17 Score=130.37 Aligned_cols=98 Identities=31% Similarity=0.473 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC-----CCHH
Q 040003 378 NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-----LDDT 452 (489)
Q Consensus 378 ~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-----~~~~ 452 (489)
.+++.+|..++..++.+ |.|+|.||+..+.. ....+++++.+|+.||+|++|+|+.+||+.+++.++ ++++
T Consensus 4 gls~~di~~~~~~~~~~--gsi~~~eF~~~~~l--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~ 79 (107)
T d2pvba_ 4 GLKDADVAAALAACSAA--DSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 79 (107)
T ss_dssp TSCHHHHHHHHHHTCST--TCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCCHHHHHHHHHhccCC--CCcCHHHHHHHHhc--ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHH
Confidence 35788999999988765 56999999987642 234567899999999999999999999999998874 6899
Q ss_pred HHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 453 QLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 453 ~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
++.++|+.+|.|+||+|+|+||+.+|+
T Consensus 80 ~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 80 ETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 999999999999999999999999986
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.68 E-value=6.8e-17 Score=128.93 Aligned_cols=98 Identities=26% Similarity=0.424 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC-----CCHHH
Q 040003 379 LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-----LDDTQ 453 (489)
Q Consensus 379 ~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-----~~~~~ 453 (489)
++..++.+++..++. +|.|+|+||+..+... ...++.++.+|+.||+|++|+|+.+||+.+|+.++ +++.+
T Consensus 6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e 81 (109)
T d1rwya_ 6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKE 81 (109)
T ss_dssp SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHH
T ss_pred cCHHHHHHHHHhccc--CCCcCHHHHHHHHccc--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHH
Confidence 467888899988754 5789999998877432 23567889999999999999999999999998874 67999
Q ss_pred HHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 454 LEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 454 ~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.||+.+|.|+||+|+|+||+++|.+
T Consensus 82 ~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 82 TKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 999999999999999999999999976
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.63 E-value=2.7e-16 Score=125.07 Aligned_cols=101 Identities=26% Similarity=0.438 Sum_probs=85.8
Q ss_pred hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC-----C
Q 040003 375 VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG-----L 449 (489)
Q Consensus 375 lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-----~ 449 (489)
++..++.++|..+++.++. +|.++|++|+..+. . .....+.++++|+.||+|++|+|+.+||+.+++.++ +
T Consensus 2 ~~d~ls~~dI~~~l~~~~~--~~s~~~~~F~~~~~-~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l 77 (108)
T d1rroa_ 2 ITDILSAEDIAAALQECQD--PDTFEPQKFFQTSG-L-SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHS-G-GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred hhhhCCHHHHHHHHHhccc--CCCccHHHHHHHHc-c-CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCC
Confidence 3455788999999988764 56799999976553 2 234567889999999999999999999999998874 6
Q ss_pred CHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 450 DDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 450 ~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
++++++.+|+.+|.|+||.|+|+||+.+|+
T Consensus 78 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 899999999999999999999999999985
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.54 E-value=2.5e-15 Score=107.71 Aligned_cols=62 Identities=47% Similarity=0.906 Sum_probs=59.0
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
+++++.+|+.||+|++|+|+.+||+.+++.+| +++.++..+++.+|.|+||.|+|+||+++|
T Consensus 2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 57899999999999999999999999999998 689999999999999999999999999875
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.54 E-value=1.6e-15 Score=109.58 Aligned_cols=65 Identities=37% Similarity=0.705 Sum_probs=60.5
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+++++.+|+.||.|++|+|+.+||+.+|+.+| +++++++.||+.+|.|+||.|+|+||+.+|.++
T Consensus 1 eeel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r~ 68 (68)
T d1c7va_ 1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 68 (68)
T ss_dssp CHHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred CHHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 35688999999999999999999999999987 689999999999999999999999999999863
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.53 E-value=6.4e-15 Score=108.70 Aligned_cols=66 Identities=35% Similarity=0.737 Sum_probs=62.3
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+++++.+|+.||+|++|+|+.+||+.+|+.+| ++++++++|++.+|.|++|+|+|+||+.+|..
T Consensus 6 ~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 6 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 4577899999999999999999999999999998 68999999999999999999999999999974
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.51 E-value=1.4e-14 Score=107.71 Aligned_cols=69 Identities=33% Similarity=0.682 Sum_probs=63.9
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
..+++++++|+.||.|++|+|+.+||+.+|+.+| +++.++.++++.+|.|++|.|+|+||+++|.+..+
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~~ 76 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 76 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccCC
Confidence 4567899999999999999999999999999988 68999999999999999999999999999987653
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.49 E-value=1.5e-14 Score=108.39 Aligned_cols=66 Identities=36% Similarity=0.768 Sum_probs=62.1
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.++++++++|+.||+|++|+|+.+||+.+|+.+| +++.+++.+|..+|.|+||+|+|+||+.+|+.
T Consensus 12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 3567899999999999999999999999999998 78999999999999999999999999999974
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=2e-13 Score=117.07 Aligned_cols=121 Identities=21% Similarity=0.306 Sum_probs=100.1
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.++.++..+|.|++|+|+.+||..++..+ .++..+|+.+|.|++|.|+++||..++....-..+.+.+..+++.
T Consensus 41 ~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~ 114 (165)
T d1k94a_ 41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 34556677899999999999999887664 578899999999999999999999888765444456678888888
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce--eHHHHHHHHH
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI--DYSEFVAMMQ 479 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I--~~~eF~~~~~ 479 (489)
+|. +|.|+.+||..++..+ +.+.++|+.+|.|++|.| +|+||+.++.
T Consensus 115 ~d~--~g~i~~~eFi~~~~~l----~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~ 163 (165)
T d1k94a_ 115 YSK--NGRIFFDDYVACCVKL----RALTDFFRKRDHLQQGSANFIYDDFLQGTM 163 (165)
T ss_dssp HCB--TTBCBHHHHHHHHHHH----HHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred cCC--CCcCcHHHHHHHHHHH----HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 875 5889999999888653 457778999999999977 7999998764
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.47 E-value=3.4e-14 Score=102.35 Aligned_cols=61 Identities=23% Similarity=0.510 Sum_probs=58.2
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
++.+|+.||+|++|+|+..||+.+++.+| ++++++.++++.+|.|+||+|+|+||+.+|.+
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 56899999999999999999999999998 68999999999999999999999999999975
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=5.7e-15 Score=127.87 Aligned_cols=129 Identities=12% Similarity=0.162 Sum_probs=89.6
Q ss_pred HHHHHhh--hcCCCCCCccHHHHHHHHHHhCCCC--CHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhh
Q 040003 348 LKEMFKM--IDTDNSGYITLEELKKGLQRVGANL--MDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAA 423 (489)
Q Consensus 348 l~~~F~~--~D~d~~g~i~~~el~~~l~~lg~~~--~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~ 423 (489)
|+++|.. +|.|++|+|+..||..++...+... ....+..++...|.+++|.|+|+||...+..+. ...++..+
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~~ 83 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEI 83 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTT
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHHH
Confidence 3444443 7999999999999999886543222 233555677888999999999999999886543 34568899
Q ss_pred cccccccCCCcccHHHHHHHHHHcC------------CCHHHHHHHHHHhcCCCC----CceeHHHHHHHHH
Q 040003 424 FSYFDKDGSGYITPDELQTACQQFG------------LDDTQLEDIIREVDQDND----GRIDYSEFVAMMQ 479 (489)
Q Consensus 424 F~~~D~d~~G~I~~~El~~~l~~~g------------~~~~~~~~~~~~~d~d~d----G~I~~~eF~~~~~ 479 (489)
|+.||.|++|+||.+||+.+|.... ++.+.+.++|..+..+.+ |.|++++|+.+|.
T Consensus 84 F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~ 155 (170)
T d2zkmx1 84 FTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLC 155 (170)
T ss_dssp CC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHH
T ss_pred HHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHc
Confidence 9999999999999999999998653 355678899999877654 8999999999884
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.46 E-value=9e-14 Score=103.19 Aligned_cols=72 Identities=35% Similarity=0.611 Sum_probs=69.1
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
.+++++++.+++++|..+|.|++|+|+..||+.+|+.+|..+++.++..++..+|.+++|.|+|+||+.+|.
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999999999999999998874
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.46 E-value=1.5e-13 Score=102.84 Aligned_cols=76 Identities=30% Similarity=0.494 Sum_probs=71.2
Q ss_pred hhhhhccHHHHHHHHHHHhhhcCCC-CCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 335 VIAESLSEEEIAGLKEMFKMIDTDN-SGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 335 ~~~~~~~~~~~~~l~~~F~~~D~d~-~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
.....++.+++..++++|..+|.|+ +|.|+..||+.+|+.+|..+++.+++.+++.+|.|++|.|+|+||+..|.+
T Consensus 4 ~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 4 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 3456899999999999999999996 799999999999999999999999999999999999999999999998864
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.46 E-value=4.3e-13 Score=117.22 Aligned_cols=123 Identities=24% Similarity=0.442 Sum_probs=105.2
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
..++.+|..+|.|++|.|+.+||..++..+ ..+..+++.+|.+++|.|+.+||..++........++.+..+++
T Consensus 56 ~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~ 129 (181)
T d1hqva_ 56 VTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129 (181)
T ss_dssp HHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHH
T ss_pred HHHHHHhhccccccccchhhhHHHhhhhhc------cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHH
Confidence 445667788999999999999999888653 46778899999999999999999988876655556778889999
Q ss_pred cccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce--eHHHHHHHH
Q 040003 426 YFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI--DYSEFVAMM 478 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I--~~~eF~~~~ 478 (489)
.+|.+++|.|+.+||..++.. -+.+.++|+.+|+++||.| +|+||+.+|
T Consensus 130 ~~d~~~dg~Is~~eF~~~~~~----l~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 130 KFDRQGRGQIAFDDFIQGCIV----LQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HHCSSCSSCBCHHHHHHHHHH----HHHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred HhCCCCCCcCcHHHHHHHHHH----HHHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence 999999999999999988754 3467889999999999965 799999886
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.46 E-value=2.9e-14 Score=100.53 Aligned_cols=59 Identities=29% Similarity=0.697 Sum_probs=55.9
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVA 476 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~ 476 (489)
++++++|+.||+|++|+|+.+||+.+|+.+| +++.++..|++.+|.|++|+|+|+||++
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 4678999999999999999999999999998 7899999999999999999999999985
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.45 E-value=2.6e-13 Score=119.24 Aligned_cols=121 Identities=22% Similarity=0.258 Sum_probs=101.4
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.+..++..+|.|++|+|+.+||..++..+ ..+..+|+.+|.|++|.|+.+|+..++.......+. ++.++|..
T Consensus 62 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~-~~~~~~~~ 134 (186)
T d1df0a1 62 TCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVA 134 (186)
T ss_dssp HHHHHHHHHCCSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCH-HHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhH------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccH-HHHHHHHH
Confidence 45677889999999999999999887653 568889999999999999999999988754332233 34567778
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce--eHHHHHHHH
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI--DYSEFVAMM 478 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I--~~~eF~~~~ 478 (489)
+|.|++|.|+.+||..++..+ +.+..+|+.+|.|++|.| +|+||+.+.
T Consensus 135 ~d~d~dg~I~f~eFi~~~~~l----~~~~~~F~~~D~~~~G~i~l~~~ef~~~~ 184 (186)
T d1df0a1 135 RFADDELIIDFDNFVRCLVRL----EILFKIFKQLDPENTGTIQLDLISWLSFS 184 (186)
T ss_dssp HHCCSTTEECHHHHHHHHHHH----HHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHcCCCCeEeHHHHHHHHHHH----HHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence 899999999999999988653 678899999999999987 899999874
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.45 E-value=1.2e-13 Score=103.38 Aligned_cols=69 Identities=28% Similarity=0.477 Sum_probs=64.9
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
+++++..++++|+.+|.|++|+|+..||+.+|+.+| .++..++..+++.+|.|++|.|+|+||+.+|..
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 468899999999999999999999999999999999 589999999999999999999999999998754
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.45 E-value=7e-14 Score=104.72 Aligned_cols=63 Identities=43% Similarity=0.716 Sum_probs=59.4
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+++.+|+.||+|++|+|+.+||+.+|+.+| +++.++.+++..+|.|+||.|+|+||+.+|.+
T Consensus 14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 14 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4678999999999999999999999999998 68999999999999999999999999999964
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.44 E-value=8.6e-14 Score=102.04 Aligned_cols=71 Identities=37% Similarity=0.646 Sum_probs=68.2
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
++++++.+++++|+.+|.|++|+|+..||+.+|+.+|..+++.++..+++.+|.|++|.|+|+||+.+|..
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 68899999999999999999999999999999999999999999999999999999999999999988753
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.44 E-value=7e-14 Score=104.72 Aligned_cols=66 Identities=27% Similarity=0.519 Sum_probs=61.3
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC-CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG-LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
..+++++|+.||+|++|+|+.+||+.+|+.+| .++.++.++|+.+|.|++|.|+|+||+.+|+...
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~~ 71 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 71 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHCc
Confidence 35678999999999999999999999999998 7899999999999999999999999999998654
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.44 E-value=1.8e-13 Score=102.47 Aligned_cols=73 Identities=38% Similarity=0.603 Sum_probs=69.5
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
..++++++.+++++|..+|.|++|+|+..||+.+|+.+|..+++.++..++..+|.|++|.|+|+||+.+|..
T Consensus 6 ~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999999999998864
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.43 E-value=7.5e-14 Score=102.38 Aligned_cols=63 Identities=46% Similarity=0.787 Sum_probs=59.4
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+++.+|+.||.|++|+|+.+||+.+|+.+| ++++++..+++.+|.|++|.|+|+||+.+|.+
T Consensus 8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 4678999999999999999999999999998 68999999999999999999999999999864
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=1.1e-12 Score=113.62 Aligned_cols=122 Identities=23% Similarity=0.330 Sum_probs=102.7
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
+.++.++..+|.|++|.|+.+||..++... ..+...|+.+|.|++|.|+.+|+..++.......+.+.+..+|+
T Consensus 47 ~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~ 120 (172)
T d1juoa_ 47 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 120 (172)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCceehHHHHHHHHhh------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 335566788999999999999999887653 45778899999999999999999998876655456677888899
Q ss_pred cccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce--eHHHHHHHHH
Q 040003 426 YFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI--DYSEFVAMMQ 479 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I--~~~eF~~~~~ 479 (489)
.+| .+|.|+.+||..++..+ ..+.++++.+|.|++|.| +|+||+.++.
T Consensus 121 ~~d--~~g~i~~~eF~~~~~~~----~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l 170 (172)
T d1juoa_ 121 RYS--TNGKITFDDYIACCVKL----RALTDSFRRRDTAQQGVVNFPYDDFIQCVM 170 (172)
T ss_dssp HTC--SSSSEEHHHHHHHHHHH----HHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred HHH--hcCCcCHHHHHHHHHHH----HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 886 56889999999988764 467889999999999987 8999998874
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.42 E-value=1.1e-14 Score=110.77 Aligned_cols=82 Identities=32% Similarity=0.491 Sum_probs=67.0
Q ss_pred CCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHH
Q 040003 395 NSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYS 472 (489)
Q Consensus 395 ~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~ 472 (489)
.+|.|+.++...+ ..-.......++.+|+.||+|++|+|+.+||+.+|+.+| +++++++++++.+|.|++|+|+|+
T Consensus 2 ~~g~id~~~~~ma--~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~ 79 (87)
T d1s6ja_ 2 SSGHIDDDDKHMA--ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYG 79 (87)
T ss_dssp CSSSSSSHHHHSS--SSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHH
T ss_pred CCCccCchHHHHH--hhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHH
Confidence 5788888875321 111111223578999999999999999999999999998 689999999999999999999999
Q ss_pred HHHHHH
Q 040003 473 EFVAMM 478 (489)
Q Consensus 473 eF~~~~ 478 (489)
||+.+|
T Consensus 80 EFl~am 85 (87)
T d1s6ja_ 80 EFIAAT 85 (87)
T ss_dssp HHTTCC
T ss_pred HHHHHH
Confidence 999765
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.42 E-value=9.7e-14 Score=103.02 Aligned_cols=63 Identities=35% Similarity=0.692 Sum_probs=59.3
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+++++|+.||.|++|+|+.+||+.+|+.+| +++.++.++++.+|.|++|+|+|+||+.+|.+
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4678999999999999999999999999998 68999999999999999999999999999964
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.41 E-value=1.1e-12 Score=113.72 Aligned_cols=122 Identities=20% Similarity=0.333 Sum_probs=100.1
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccc
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSY 426 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~ 426 (489)
.++.++..+|.|++|.|+.+||..++..+ ..+..+|+.+|.|++|.|+..||..++.......+++ ....|..
T Consensus 48 ~~~~l~~~~d~d~~g~i~~~ef~~~~~~~------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~-~~~~~~~ 120 (173)
T d1alva_ 48 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH-LYSMIIR 120 (173)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHH-HHHHHHH
T ss_pred HHHHHHHHhccCCCCcccchhhhhhhhhh------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHH-HHHHhhc
Confidence 45667889999999999999999887653 4577889999999999999999998886544333333 3456667
Q ss_pred ccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce--eHHHHHHHHH
Q 040003 427 FDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI--DYSEFVAMMQ 479 (489)
Q Consensus 427 ~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I--~~~eF~~~~~ 479 (489)
+|.|++|.|+.+||..++..+ +.+..+|+.+|.|++|.| +|+||+.+..
T Consensus 121 ~d~d~~G~i~~~EF~~~~~~~----~~~~~~f~~~D~d~~G~it~~~~efl~~~~ 171 (173)
T d1alva_ 121 RYSDEGGNMDFDNFISCLVRL----DAMFRAFKSLDKDGTGQIQVNIQEWLQLTM 171 (173)
T ss_dssp HHTCSSSCBCHHHHHHHHHHH----HHHHHHHHHHSSSCCSEEEEEHHHHHHHHH
T ss_pred cccCCCCeEeHHHHHHHHHHH----HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 788999999999999998653 578889999999999988 6999998764
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.40 E-value=3e-13 Score=101.22 Aligned_cols=64 Identities=33% Similarity=0.600 Sum_probs=59.5
Q ss_pred HHHHHhhcccccccC-CCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDG-SGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~-~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
...++++|+.||+|+ +|+|+..||+.+|+.+| +++.+++++++++|.|+||.|+|+||+.+|.+
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 357889999999995 79999999999999999 68999999999999999999999999999975
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.38 E-value=1.3e-12 Score=114.39 Aligned_cols=121 Identities=20% Similarity=0.241 Sum_probs=95.8
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcc
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFS 425 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~ 425 (489)
+.++.++..+|.|++|+|+.+||..++..+ ..+..+|+.+|.|++|.|+..||..++.......+.+.+..++.
T Consensus 63 e~~~~li~~~D~d~~G~i~~~EF~~l~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~ 136 (188)
T d1qxpa2 63 ESCRSMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVA 136 (188)
T ss_dssp HHHHHHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHH
Confidence 346777889999999999999999887664 56888999999999999999999998865443333444455555
Q ss_pred cccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce--eHHHHHHH
Q 040003 426 YFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI--DYSEFVAM 477 (489)
Q Consensus 426 ~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I--~~~eF~~~ 477 (489)
. |.|++|.|+.+||..++..+ ..+.++|+.+|.+++|.| +++||+.+
T Consensus 137 ~-~~~~dg~i~f~eFi~~~~~l----~~~~~~F~~~D~~~~G~i~l~~~efl~~ 185 (188)
T d1qxpa2 137 R-FADDELIIDFDNFVRCLVRL----EILFKIFKQLDPENTGTIQLDLISWLSF 185 (188)
T ss_dssp H-TSCSSSBCCHHHHHHHHHHH----HHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred H-hcCCCCcCCHHHHHHHHHHH----HHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence 5 46999999999999988653 456778999999999966 99999875
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.37 E-value=3.1e-12 Score=111.76 Aligned_cols=120 Identities=20% Similarity=0.307 Sum_probs=102.0
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccc
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYF 427 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~ 427 (489)
++.+|..+|.|++|+|+.++|...+.. ...+...|..+|.+++|.|+.+||..++.........+.+..+|+.+
T Consensus 56 ~~~l~~~~d~d~~~~i~~~ef~~~~~~------~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~ 129 (182)
T d1y1xa_ 56 TEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKF 129 (182)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccccccccc------ccccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhc
Confidence 456678889999999999999887755 35678889999999999999999988887655445677888999999
Q ss_pred cccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCce--eHHHHHHH
Q 040003 428 DKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRI--DYSEFVAM 477 (489)
Q Consensus 428 D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I--~~~eF~~~ 477 (489)
|.|++|.|+.+||.+++..+ ..+.++|+.+|.+++|.| +|+||+..
T Consensus 130 d~~~dg~I~~~eF~~~~~~l----~~~~~~F~~~D~~~~G~is~~~~~f~~~ 177 (182)
T d1y1xa_ 130 DRQRRGSLGFDDYVELSIFV----CRVRNVFAFYDRERTGQVTFTFDTFIGG 177 (182)
T ss_dssp CTTCSSSBCHHHHHHHHHHH----HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred ccCCCCCcCHHHHHHHHHHH----HHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence 99999999999999988553 357789999999999995 78999864
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.36 E-value=7.7e-13 Score=94.42 Aligned_cols=63 Identities=35% Similarity=0.763 Sum_probs=59.9
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
+.|+++|+.+|.|++|+|+.+||+.+++.+|..+++.++..+++.+|.|++|.|+|+||+.+|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 458899999999999999999999999999999999999999999999999999999998754
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.35 E-value=2.7e-14 Score=108.51 Aligned_cols=75 Identities=72% Similarity=1.077 Sum_probs=69.1
Q ss_pred hhhhhhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 334 RVIAESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
+.++..++.+++..|+++|..+|.|++|+|+..||+.+|+.+|..+++.++..+++.+|.|++|.|+|+||+.+|
T Consensus 11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am 85 (87)
T d1s6ja_ 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 344567777888889999999999999999999999999999999999999999999999999999999998765
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.35 E-value=9.4e-13 Score=96.78 Aligned_cols=65 Identities=31% Similarity=0.657 Sum_probs=61.8
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
++++.+|+.||.|++|+|+..||+.+|+.+|..+++.++..+++.+|.|++|.|+|+||+.+|..
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 46888999999999999999999999999999999999999999999999999999999998854
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.33 E-value=2.9e-13 Score=99.99 Aligned_cols=66 Identities=30% Similarity=0.608 Sum_probs=57.4
Q ss_pred hHHHHHhhccccccc--CCCcccHHHHHHHHHHcC--C--CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDKD--GSGYITPDELQTACQQFG--L--DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d--~~G~I~~~El~~~l~~~g--~--~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
++++++.+|+.||.+ ++|+|+.+||+.+|+.+| + ++.+++++++.+|.|+||.|+|+||+.+|.+.
T Consensus 3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 467799999999664 479999999999999887 3 34579999999999999999999999999753
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.32 E-value=2.2e-12 Score=90.66 Aligned_cols=61 Identities=28% Similarity=0.646 Sum_probs=58.4
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIA 406 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~ 406 (489)
++++++|+.+|.+++|+|+..||+.+|+.+|..+++.++..+++.+|.|++|.|+|+||+.
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 3688999999999999999999999999999999999999999999999999999999974
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.31 E-value=1.8e-12 Score=93.07 Aligned_cols=63 Identities=19% Similarity=0.419 Sum_probs=60.1
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
++++|+.+|.|++|+|+..||+.+++.+|..+++.++..+|+.+|.|++|.|+|+||+.+|..
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999988753
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.30 E-value=3e-12 Score=94.72 Aligned_cols=67 Identities=28% Similarity=0.550 Sum_probs=63.1
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
..++++++|+.+|.|++|+|+..||+.+|+.+|..++..++..+++.+|.|++|.|+|+||+.+|..
T Consensus 7 ~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 3457899999999999999999999999999999999999999999999999999999999998864
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=2.6e-12 Score=96.62 Aligned_cols=63 Identities=22% Similarity=0.480 Sum_probs=59.2
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
....+.++|+.||.|++|+|+.+||+.+|..+| ++++++..++..+|.|++|.|+|.||++.+
T Consensus 18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 456788999999999999999999999999998 789999999999999999999999999876
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.28 E-value=3.5e-12 Score=95.21 Aligned_cols=64 Identities=42% Similarity=0.778 Sum_probs=61.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
.+|+++|..+|.|++|+|+..||+.+|+.+|..++..++..++..+|.|++|.|+|+||+.+|.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999998774
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.27 E-value=1.2e-12 Score=94.10 Aligned_cols=64 Identities=31% Similarity=0.571 Sum_probs=60.1
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
++++++|+.+|.+++|+|+..||+.+|+.+|.. .++.+++.+++.+|.|++|.|+|+||+.+|.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 458899999999999999999999999999875 7999999999999999999999999998875
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.26 E-value=6.4e-12 Score=110.56 Aligned_cols=99 Identities=23% Similarity=0.461 Sum_probs=86.6
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh------------hh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK------------IQ 415 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~------------~~ 415 (489)
...+|+.+|.+++|.|+..||..++..++....++.++.+|+.+|.|++|.|+++||..++..... ..
T Consensus 65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~ 144 (190)
T d1fpwa_ 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT 144 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCC
T ss_pred HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhh
Confidence 356899999999999999999999999988888899999999999999999999999888754321 12
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
.++.+..+|+.+|.|+||.|+.+||++++..
T Consensus 145 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~ 175 (190)
T d1fpwa_ 145 PEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175 (190)
T ss_dssp HHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 2466889999999999999999999998865
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=3.3e-12 Score=98.45 Aligned_cols=61 Identities=23% Similarity=0.323 Sum_probs=57.8
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMM 478 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~ 478 (489)
.++.++|+.+|+|++|+|+.+|++.++...|++.+++..+++.+|.|+||.|+|+||+.+|
T Consensus 10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am 70 (95)
T d1c07a_ 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999998766
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.23 E-value=5.9e-12 Score=103.90 Aligned_cols=99 Identities=24% Similarity=0.428 Sum_probs=84.9
Q ss_pred HHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---C--CHHHHHHHH
Q 040003 384 IDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---L--DDTQLEDII 458 (489)
Q Consensus 384 i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~--~~~~~~~~~ 458 (489)
.+.+|+.+|.|++|.|+++||..++........++.+..+|+.+|.|++|.|+.+||..++.... . ....+..++
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F 81 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 46799999999999999999998887666556677888999999999999999999999886543 1 234578899
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSG 482 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~ 482 (489)
+.+|.|++|.|+.+||..++...+
T Consensus 82 ~~~D~~~~g~i~~~el~~~~~~~~ 105 (134)
T d1jfja_ 82 KLMDVDGDGKLTKEEVTSFFKKHG 105 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTT
T ss_pred cccccccCCcccHHHHHHHHHhcC
Confidence 999999999999999999987654
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.22 E-value=1e-11 Score=95.02 Aligned_cols=62 Identities=23% Similarity=0.292 Sum_probs=58.0
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
..++++|+.+|+|++|+|+.+|++.+++..|++..++..|++.+|.|+||.|+|+||+.+|+
T Consensus 9 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~ 70 (92)
T d1fi6a_ 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999986653
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.18 E-value=3e-11 Score=106.07 Aligned_cols=101 Identities=20% Similarity=0.332 Sum_probs=85.6
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh------------
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK------------ 413 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~------------ 413 (489)
..+..+|..+|.|++|.|+..||..++..+.....+..+..+|+.+|.|++|.|+++||...+.....
T Consensus 58 ~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~ 137 (189)
T d1jbaa_ 58 QYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAE 137 (189)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSS
T ss_pred HHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhh
Confidence 34677899999999999999999999999887777888999999999999999999999877643211
Q ss_pred -----hhhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 414 -----IQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 414 -----~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
...++.+..+|+.+|+|+||.|+.+||.++++.
T Consensus 138 ~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 175 (189)
T d1jbaa_ 138 QQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175 (189)
T ss_dssp TTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred hhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 112456778999999999999999999998864
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.18 E-value=1.8e-11 Score=108.66 Aligned_cols=120 Identities=19% Similarity=0.206 Sum_probs=97.1
Q ss_pred CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHcc-CCCCCcceehHHHHHHHHHhhhh-hhHHHHHhhcccccccCCCccc
Q 040003 359 NSGYITLEELKKGLQRVGANLMDSEIDGLMQAG-DIDNSGTMDYGEFIAAMLHLNKI-QREDHMYAAFSYFDKDGSGYIT 436 (489)
Q Consensus 359 ~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~-D~d~~g~I~f~eF~~~~~~~~~~-~~~~~l~~~F~~~D~d~~G~I~ 436 (489)
..|.|+.++|..+.... ..++.++..+++.+ +.+++|.|+++||..++...... .....+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~e~l~~l~~~t--~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~ 81 (201)
T d1omra_ 4 KSGALSKEILEELQLNT--KFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81 (201)
T ss_dssp SSCTHHHHHHHHHGGGC--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEE
T ss_pred ccCCCCHHHHHHHHHhC--CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEe
Confidence 46789988887766543 46788998888774 67789999999999988765432 3344557899999999999999
Q ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 437 PDELQTACQQFG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 437 ~~El~~~l~~~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..||..++..+. ..++.+..+|+.+|.|++|.|+++||..++..
T Consensus 82 f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~ 127 (201)
T d1omra_ 82 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127 (201)
T ss_dssp HHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred ehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHH
Confidence 999998887653 45667899999999999999999999988864
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=99.17 E-value=1.3e-11 Score=94.66 Aligned_cols=64 Identities=25% Similarity=0.481 Sum_probs=56.6
Q ss_pred HHHHhhcccc-cccCC-CcccHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSYF-DKDGS-GYITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~-G~I~~~El~~~l~~~g-------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+..+|+.| |+||+ |+|+.+||+++|+..+ .+++++.++|+.+|.|+||+|+|+||+.+|...
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 5678899888 88875 9999999999998764 468999999999999999999999999998653
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=2.9e-11 Score=105.97 Aligned_cols=109 Identities=19% Similarity=0.334 Sum_probs=87.7
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh------------hhh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN------------KIQ 415 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~------------~~~ 415 (489)
...+|+.+|.+++|.|+..||..++..+.....++.+..+|+.+|.|++|.|+.+||..++.... ...
T Consensus 62 ~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~ 141 (187)
T d1g8ia_ 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT 141 (187)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred HHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence 35588999999999999999999998876556677899999999999999999999988775321 112
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIRE 460 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~ 460 (489)
.++.+..+|+.+|.|+||.|+.+||.+++.. +..+.++|..
T Consensus 142 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~----~p~~~~~l~~ 182 (187)
T d1g8ia_ 142 PEKRVDRIFAMMDKNADGKLTLQEFQEGSKA----DPSIVQALSL 182 (187)
T ss_dssp HHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH----CHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH----CHHHHHHHHH
Confidence 2456788999999999999999999999875 3344444443
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.14 E-value=6.8e-12 Score=92.67 Aligned_cols=66 Identities=18% Similarity=0.437 Sum_probs=56.6
Q ss_pred hHHHHHhhcccccc-c-CCCcccHHHHHHHHHHc--C--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 416 REDHMYAAFSYFDK-D-GSGYITPDELQTACQQF--G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 416 ~~~~l~~~F~~~D~-d-~~G~I~~~El~~~l~~~--g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..++++.+|+.||. | +.|+|+.+||+.+|+.+ + .+++++++||+.+|.|+||.|+|+||+.+|.+.
T Consensus 5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 35678899999975 3 45899999999999886 3 356779999999999999999999999999763
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=99.14 E-value=1.7e-11 Score=93.38 Aligned_cols=63 Identities=24% Similarity=0.528 Sum_probs=55.7
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.+..+|+.||.| +|+|+.+||+.+|.... .++..++++|+.+|.|+||+|+|+||+.+|.+
T Consensus 8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence 45688999999987 89999999999997643 36778999999999999999999999999865
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.14 E-value=4.4e-11 Score=94.38 Aligned_cols=86 Identities=17% Similarity=0.222 Sum_probs=60.1
Q ss_pred CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---hhhhHHHHHhhcccccccCCCcc
Q 040003 359 NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---KIQREDHMYAAFSYFDKDGSGYI 435 (489)
Q Consensus 359 ~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I 435 (489)
.+|.|+..||..++.. ...+++++..+|+.+|.|++|.|+.+|+..++..+. ....++++..+|+.+|.|+||.|
T Consensus 20 ~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I 97 (109)
T d5pala_ 20 DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKI 97 (109)
T ss_dssp STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSE
T ss_pred CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCE
Confidence 3567888888665421 234567788888888888888888888876665432 12345667778888888888888
Q ss_pred cHHHHHHHHHH
Q 040003 436 TPDELQTACQQ 446 (489)
Q Consensus 436 ~~~El~~~l~~ 446 (489)
+.+||..++.+
T Consensus 98 ~~~EF~~~m~~ 108 (109)
T d5pala_ 98 GADEFAKMVAQ 108 (109)
T ss_dssp EHHHHHHHHHH
T ss_pred eHHHHHHHHHh
Confidence 88888877754
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=99.13 E-value=4e-11 Score=91.52 Aligned_cols=65 Identities=18% Similarity=0.412 Sum_probs=55.9
Q ss_pred HHHHHhhcccc-cccCCC-cccHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYF-DKDGSG-YITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~-D~d~~G-~I~~~El~~~l~~~g-------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
-+.+..+|+.| |.|++| +|+.+||+++|+... .+++++++||+.+|.|+||.|+|+||+.+|.+.
T Consensus 8 i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 8 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 35678999998 677655 799999999997642 578999999999999999999999999999764
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=99.13 E-value=1.7e-11 Score=94.59 Aligned_cols=63 Identities=16% Similarity=0.397 Sum_probs=54.8
Q ss_pred HHHHhhcccc-cccCC-CcccHHHHHHHHHHcC----CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYF-DKDGS-GYITPDELQTACQQFG----LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~-G~I~~~El~~~l~~~g----~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+..+|+.| |.||+ |+|+.+||+.+|+..+ .++.+++++|+.+|.|+||+|+|+||+.+|..
T Consensus 14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4677899888 78875 9999999999998764 35667999999999999999999999999864
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=1.6e-11 Score=95.52 Aligned_cols=63 Identities=21% Similarity=0.252 Sum_probs=50.3
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcC---------C---------CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFG---------L---------DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g---------~---------~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
++.+|+.||.|+||+|+.+||..++..++ . ....++.+|+.+|.|+||.|||+||+.++++.
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~ 97 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 97 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence 45678888888888888888888886532 0 12357789999999999999999999999875
Q ss_pred C
Q 040003 482 G 482 (489)
Q Consensus 482 ~ 482 (489)
.
T Consensus 98 e 98 (99)
T d1snla_ 98 E 98 (99)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=99.12 E-value=3e-11 Score=91.95 Aligned_cols=64 Identities=16% Similarity=0.304 Sum_probs=56.3
Q ss_pred HHHHhhcccc-cccCCC-cccHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSYF-DKDGSG-YITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~G-~I~~~El~~~l~~~g-------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+.+..+|+.| |+||+| .|+.+||+++|+... .++.+++++++.+|.|+||+|+|+||+.+|...
T Consensus 9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 4577899887 999999 599999999997643 368899999999999999999999999999764
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.12 E-value=8.6e-11 Score=98.36 Aligned_cols=102 Identities=23% Similarity=0.269 Sum_probs=86.3
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHHH
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDIIR 459 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~~ 459 (489)
++..+|..+|.+++|.|+++||..++...........+..+|+.+|.+++|.|+.+|+..++.... ...+.+..+|+
T Consensus 10 ~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~ 89 (146)
T d1exra_ 10 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFK 89 (146)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHH
Confidence 456779999999999999999998887655555677788999999999999999999998875432 13567889999
Q ss_pred HhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 460 EVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 460 ~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
.+|.|++|.|+.+||..++...+..
T Consensus 90 ~~D~d~~G~i~~~e~~~~l~~~~~~ 114 (146)
T d1exra_ 90 VFDRDGNGLISAAELRHVMTNLGEK 114 (146)
T ss_dssp HHSTTCSSCBCHHHHHHHHHHTTCC
T ss_pred HhCCCCCCcCCHHHHHHHHHHHhhc
Confidence 9999999999999999999877644
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=1.3e-10 Score=87.08 Aligned_cols=65 Identities=22% Similarity=0.359 Sum_probs=61.3
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 344 EIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 344 ~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
....++++|..+|.+++|+|+.+||+.+|..++..+++.++..++..+|.|++|.|+|.||+..+
T Consensus 18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 45678899999999999999999999999999999999999999999999999999999998764
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=7e-11 Score=90.68 Aligned_cols=61 Identities=23% Similarity=0.313 Sum_probs=56.3
Q ss_pred HHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 418 DHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 418 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
....++|+.+| |++|+|+.+|++.+|...|++.+++..|++.+|.|+||.|+|+||+.+|+
T Consensus 10 ~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 10 AKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp HHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 45678999999 89999999999999999999999999999999999999999999976553
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.08 E-value=1.6e-10 Score=88.24 Aligned_cols=70 Identities=24% Similarity=0.340 Sum_probs=64.4
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
.+++++..+++++|+.+|.|++|+|+.+|++..|.+.+ ++..++..+++.+|.|++|.|+|+||+.++..
T Consensus 2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence 36889999999999999999999999999999999986 57889999999999999999999999977754
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.08 E-value=6.5e-11 Score=93.37 Aligned_cols=101 Identities=19% Similarity=0.246 Sum_probs=74.3
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---hhh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---KIQ 415 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---~~~ 415 (489)
.++.+++.++- +.+ +.+|.|+..||..++.. ...+..+++.+|+.+|.|++|.|+.+|+..++..+. ...
T Consensus 5 ~l~~eeI~~~~---~~~--d~dG~idf~EF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~l 77 (109)
T d1pvaa_ 5 LLKADDIKKAL---DAV--KAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL 77 (109)
T ss_dssp HSCHHHHHHHH---HHT--CSTTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCC
T ss_pred cCCHHHHHHHH---Hhc--CCCCCCcHHHHHHHHHH--ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCC
Confidence 34555554443 333 45688999999776532 234678889999999999999999999887765442 223
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
+++++..+|+.+|.|+||.|+.+||..++.+
T Consensus 78 s~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 78 TDAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 4677888999999999999999999988753
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=8.7e-11 Score=90.29 Aligned_cols=69 Identities=22% Similarity=0.338 Sum_probs=63.6
Q ss_pred ccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 340 LSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 340 ~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
+++++..+++++|+.+|.|++|+|+.+|+..+|...+ ++..++..+++.+|.|++|.|+|+||+.+|..
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L 72 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 6788899999999999999999999999999998876 57889999999999999999999999988853
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.08 E-value=5.3e-11 Score=87.51 Aligned_cols=66 Identities=26% Similarity=0.492 Sum_probs=56.5
Q ss_pred HHHHHHHhhhcCC--CCCCccHHHHHHHHHHhCCCCC--HHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 346 AGLKEMFKMIDTD--NSGYITLEELKKGLQRVGANLM--DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 346 ~~l~~~F~~~D~d--~~g~i~~~el~~~l~~lg~~~~--~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
++++++|+.||.+ ++|+|+.+||+.+|+.+|..++ +.++..+++.+|.|++|.|+|+||+.+|...
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 4678889988664 4799999999999999987654 4579999999999999999999999988653
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.08 E-value=2.3e-10 Score=99.47 Aligned_cols=99 Identities=15% Similarity=0.307 Sum_probs=85.1
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh------------hhh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN------------KIQ 415 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~------------~~~ 415 (489)
...+|..+|.+++|.|+.+||..++..+.....+..+..+|+.+|.|++|.|+.+||...+.... ...
T Consensus 61 ~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~ 140 (181)
T d1bjfa_ 61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDEST 140 (181)
T ss_dssp HHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSS
T ss_pred HHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCccccc
Confidence 45688999999999999999999998887666778899999999999999999999988876432 122
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
.++.+..+|+.+|.|+||.|+.+||.+++..
T Consensus 141 ~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 171 (181)
T d1bjfa_ 141 PEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 171 (181)
T ss_dssp HHHHHHHHHHHSCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 3567888999999999999999999999865
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=99.07 E-value=5.3e-11 Score=89.75 Aligned_cols=64 Identities=20% Similarity=0.552 Sum_probs=56.3
Q ss_pred HHHHhhcccc-cccCCC-cccHHHHHHHHHH---cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 418 DHMYAAFSYF-DKDGSG-YITPDELQTACQQ---FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~G-~I~~~El~~~l~~---~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..+..+|+.| |+||+| .|+..||+.+++. .+ .++++++++++.+|.|+||+|+|+||+.+|...
T Consensus 9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 4577899888 999999 6999999999976 33 578899999999999999999999999999753
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.06 E-value=2.4e-10 Score=95.54 Aligned_cols=103 Identities=12% Similarity=0.092 Sum_probs=84.3
Q ss_pred HHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhccccccc--CCCcccHHHHHHHHHHcC-----CCHHH
Q 040003 381 DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKD--GSGYITPDELQTACQQFG-----LDDTQ 453 (489)
Q Consensus 381 ~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d--~~G~I~~~El~~~l~~~g-----~~~~~ 453 (489)
.++++++|..+|.|++|.|+++||..++..+....+..++..++..+|.+ ++|.|+.+||..++.... -...+
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 82 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED 82 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence 56888999999999999999999998886654444556666777766554 689999999999886532 24567
Q ss_pred HHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 454 LEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 454 ~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.++|+.+|.|++|.|+.+||..+|...+.
T Consensus 83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~ 112 (145)
T d2mysc_ 83 FVEGLRVFDKEGNGTVMGAELRHVLATLGE 112 (145)
T ss_pred HHHHHHHhhcCCCCEEcHHHHHHHHHHhCC
Confidence 889999999999999999999999987654
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=99.06 E-value=4e-11 Score=90.17 Aligned_cols=63 Identities=14% Similarity=0.316 Sum_probs=54.9
Q ss_pred HHHHhhcccc-cccCCCcc-cHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYF-DKDGSGYI-TPDELQTACQQ-FG--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~G~I-~~~El~~~l~~-~g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
+.+..+|+.| |+||+|.+ +.+||+.++.. +| +++.+++++|+.+|.|+||+|+|+||+.+|.+
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~ 77 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4577888888 99999965 99999999975 56 56678999999999999999999999999975
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.04 E-value=6.6e-11 Score=91.58 Aligned_cols=60 Identities=18% Similarity=0.270 Sum_probs=57.0
Q ss_pred HHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 420 MYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 420 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
..++|+.+|+|++|+|+.+|++.++...|++++++.+|++.+|.|+||.|+|+||+.+|+
T Consensus 13 y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 13 YEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp HHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999998885
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.03 E-value=6.1e-11 Score=93.48 Aligned_cols=84 Identities=19% Similarity=0.247 Sum_probs=46.1
Q ss_pred CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---hhhhHHHHHhhcccccccCCCcc
Q 040003 359 NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---KIQREDHMYAAFSYFDKDGSGYI 435 (489)
Q Consensus 359 ~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I 435 (489)
.+|.++..+|...+.. ...+..+++.+|+.+|.|++|.|+++||..++..+. ...+++.+..+|+.+|.|+||.|
T Consensus 20 ~~~s~~~~~F~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I 97 (108)
T d1rroa_ 20 DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97 (108)
T ss_dssp STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSE
T ss_pred cCCCccHHHHHHHHcc--CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeE
Confidence 3445666665433211 123445566666666666666666666665554331 11234556666666666666666
Q ss_pred cHHHHHHHH
Q 040003 436 TPDELQTAC 444 (489)
Q Consensus 436 ~~~El~~~l 444 (489)
+.+||..++
T Consensus 98 ~~~EF~~~m 106 (108)
T d1rroa_ 98 GADEFQEMV 106 (108)
T ss_dssp EHHHHHHHH
T ss_pred eHHHHHHHH
Confidence 666666655
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=3.1e-10 Score=94.15 Aligned_cols=103 Identities=22% Similarity=0.323 Sum_probs=88.7
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC---CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG---LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---~~~~~~~~~~ 458 (489)
++++++|..+|.|++|.|++.||..++...........+...|..+|.+++|.|+.+|+..++.... -..+++..++
T Consensus 6 ~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~~f 85 (141)
T d2obha1 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85 (141)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHHHH
Confidence 5788999999999999999999998887665556677888899999999999999999988875432 2356788999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
..+|.+++|.|+.+||..+|...+..
T Consensus 86 ~~~d~~~~G~i~~~el~~~l~~~g~~ 111 (141)
T d2obha1 86 KLFDDDETGKISFKNLKRVAKELGEN 111 (141)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHTTCC
T ss_pred HHhcccCCCCccHHHHHHHHHHhCCC
Confidence 99999999999999999999887653
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.02 E-value=2.1e-10 Score=99.38 Aligned_cols=99 Identities=20% Similarity=0.357 Sum_probs=81.4
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh------------hh
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK------------IQ 415 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~------------~~ 415 (489)
...+|+.+|.|++|.|+.+||..++..+.....+..+..+++.+|.|++|.|+++|+...+..... ..
T Consensus 53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 132 (178)
T d1s6ca_ 53 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDT 132 (178)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHH
Confidence 456889999999999999999999877765666788999999999999999999999877643211 11
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
.++.+..+|+.+|.|+||.||.+||.+++..
T Consensus 133 ~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~ 163 (178)
T d1s6ca_ 133 PRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 163 (178)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 2345678999999999999999999998754
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.01 E-value=1.9e-10 Score=90.79 Aligned_cols=84 Identities=15% Similarity=0.160 Sum_probs=54.1
Q ss_pred CCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh---hhhHHHHHhhcccccccCCCccc
Q 040003 360 SGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK---IQREDHMYAAFSYFDKDGSGYIT 436 (489)
Q Consensus 360 ~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~ 436 (489)
+|.|+..||..++... ..++.+++.+|+.+|.|++|.|+++||..++..+.. ...+.++..+|+.+|.|+||.|+
T Consensus 21 ~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~ 98 (109)
T d1rwya_ 21 ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98 (109)
T ss_dssp TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEE
T ss_pred CCCcCHHHHHHHHccc--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEe
Confidence 4567777776655321 234566777777777777777777777766654322 12355566777777777777777
Q ss_pred HHHHHHHHH
Q 040003 437 PDELQTACQ 445 (489)
Q Consensus 437 ~~El~~~l~ 445 (489)
.+||.+++.
T Consensus 99 ~~EF~~~m~ 107 (109)
T d1rwya_ 99 VEEFSTLVA 107 (109)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777665
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.01 E-value=6.5e-10 Score=92.87 Aligned_cols=107 Identities=21% Similarity=0.278 Sum_probs=88.7
Q ss_pred CCCHHHH---HHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--C-CH
Q 040003 378 NLMDSEI---DGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--L-DD 451 (489)
Q Consensus 378 ~~~~~~i---~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~-~~ 451 (489)
+++++++ ..+|+.+|.|++|.|+++||..++........+..+...+..++.++++.++.+++..++.... . +.
T Consensus 3 ~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (146)
T d1lkja_ 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE 82 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHH
Confidence 3455544 5679999999999999999998887655445567788889999999999999999999887654 2 35
Q ss_pred HHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 452 TQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 452 ~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
+++..+|+.+|.|++|.|+.+||..+|...+..
T Consensus 83 ~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~ 115 (146)
T d1lkja_ 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115 (146)
T ss_dssp HHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCc
Confidence 679999999999999999999999999876654
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.01 E-value=6.4e-10 Score=96.77 Aligned_cols=99 Identities=21% Similarity=0.306 Sum_probs=81.2
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh--------hhhhHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN--------KIQRED 418 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~--------~~~~~~ 418 (489)
...+|..+|.|++|.|+..||..++..+... ..+..+..+|+.+|.|++|.|+.+|+...+.... ....++
T Consensus 56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (183)
T d2zfda1 56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135 (183)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 4578999999999999999999998776543 4466788999999999999999999988764321 112234
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
.+..+|+.+|.|++|.|+.+||..++..
T Consensus 136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~ 163 (183)
T d2zfda1 136 IIDKTFEEADTKHDGKIDKEEWRSLVLR 163 (183)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 5678999999999999999999999865
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=5.1e-11 Score=94.04 Aligned_cols=63 Identities=22% Similarity=0.287 Sum_probs=58.2
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.+.+..+|+.+|+|++|+|+.+|++.+|...|++..++..|++.+|.|+||.|+++||+.+|+
T Consensus 21 ~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 21 REYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence 345678999999999999999999999999999999999999999999999999999997663
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.01 E-value=1.4e-10 Score=91.13 Aligned_cols=63 Identities=37% Similarity=0.570 Sum_probs=35.2
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhC---CCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVG---ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg---~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
..++.+|+.+|.|++|+|+..||+.+|+.++ ...++++++.+++.+|.|++|.|+|+||+.+|
T Consensus 40 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m 105 (107)
T d2pvba_ 40 DDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMI 105 (107)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 3455555555666666666666555555553 23455555555555555555556666555444
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=99.00 E-value=2.2e-10 Score=88.18 Aligned_cols=71 Identities=15% Similarity=0.251 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhhh-cCCCC-CCccHHHHHHHHHHhCCC--CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhh
Q 040003 343 EEIAGLKEMFKMI-DTDNS-GYITLEELKKGLQRVGAN--LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK 413 (489)
Q Consensus 343 ~~~~~l~~~F~~~-D~d~~-g~i~~~el~~~l~~lg~~--~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~ 413 (489)
..+..+..+|+.+ |.|++ |+|+..||+.+|+.++.. .+..+++.+++.+|.|+||.|+|+||+.++..+..
T Consensus 11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l~~ 85 (98)
T d1yuta1 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAK 85 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 4577889999887 77774 999999999999987543 45667999999999999999999999999876543
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=1.1e-09 Score=94.99 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=80.7
Q ss_pred HHHHHhhhcCC-CCCCccHHHHHHHHHHhCC-CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh---------hhhh
Q 040003 348 LKEMFKMIDTD-NSGYITLEELKKGLQRVGA-NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN---------KIQR 416 (489)
Q Consensus 348 l~~~F~~~D~d-~~g~i~~~el~~~l~~lg~-~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~---------~~~~ 416 (489)
...+|+.+|.+ ++|.|+.+||..+|..+.. ...++.++.+|+.+|.|++|.|+.+|+...+.... ...-
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 35688899987 6899999999999988753 35567789999999999999999999988775431 1122
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
++.+..+|+.+|.|+||.|+.+||.+++..
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~ 168 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISR 168 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 344667899999999999999999998865
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.95 E-value=2.1e-09 Score=89.26 Aligned_cols=98 Identities=11% Similarity=0.214 Sum_probs=81.3
Q ss_pred HHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc-C--CCHHHHHHHH
Q 040003 382 SEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF-G--LDDTQLEDII 458 (489)
Q Consensus 382 ~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g--~~~~~~~~~~ 458 (489)
++++++|..+|.|++|.|+++||..++..+.....+..+..++ .+++|.|+.+||..++... . -+.+++..+|
T Consensus 7 ~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~----~~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF 82 (142)
T d1wdcb_ 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAF 82 (142)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH----TTSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHH----HhccCccccccccccccccccccchhhhHHHhh
Confidence 3567789999999999999999999887665545566676666 3788999999999987543 2 3478899999
Q ss_pred HHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 459 REVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 459 ~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+.+|.|++|.|+.+||..+|...+.
T Consensus 83 ~~~D~d~~G~I~~~el~~~l~~~g~ 107 (142)
T d1wdcb_ 83 AMFDEQETKKLNIEYIKDLLENMGD 107 (142)
T ss_dssp HTTCTTCCSCEEHHHHHHHHHHSSS
T ss_pred hhhcccCCCcccHHHHHHHHHHccc
Confidence 9999999999999999999987764
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.95 E-value=1.1e-09 Score=83.50 Aligned_cols=70 Identities=21% Similarity=0.312 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhhh-cCCCC-CCccHHHHHHHHHHhCC-----CCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 343 EEIAGLKEMFKMI-DTDNS-GYITLEELKKGLQRVGA-----NLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 343 ~~~~~l~~~F~~~-D~d~~-g~i~~~el~~~l~~lg~-----~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
..+..+.++|..+ |.|++ |+|+.+||+.+|..++. ..++.++..+|+.+|.|+||.|+|+||+.+|..+.
T Consensus 6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~ 82 (93)
T d1zfsa1 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (93)
T ss_dssp HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 4567888999887 88875 99999999999998753 45788999999999999999999999999887654
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.94 E-value=2.9e-10 Score=83.66 Aligned_cols=68 Identities=24% Similarity=0.287 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhhcC--CCCCCccHHHHHHHHHHhC--CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMIDT--DNSGYITLEELKKGLQRVG--ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 344 ~~~~l~~~F~~~D~--d~~g~i~~~el~~~l~~lg--~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
....|+.+|..+|. ++.|+|+..||+.+|+.+. ...++++++.+++.+|.|+||.|+|+||+.+|..+
T Consensus 5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 45678899999975 3458999999999999983 44566779999999999999999999999988654
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.93 E-value=4.5e-10 Score=85.31 Aligned_cols=70 Identities=20% Similarity=0.337 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh-----CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRV-----GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~l-----g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
+..+..+..+|..+|.| +|+|+.+||+.+|... +...++..++++++.+|.|+||.|+|+||+.++..+.
T Consensus 5 E~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~ 79 (92)
T d1a4pa_ 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 79 (92)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence 34577899999999987 8999999999999874 3345677899999999999999999999999886643
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=9.6e-10 Score=84.15 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=62.8
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
.+++++..+++++|..+| +++|+|+.+|++..|.+.| ++..++..++..+|.|++|.|+|+||+.++..
T Consensus 3 ~ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~L 71 (95)
T d2jxca1 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71 (95)
T ss_dssp SSCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 478899999999999999 8999999999999998876 56789999999999999999999999887754
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.92 E-value=1.3e-09 Score=92.67 Aligned_cols=102 Identities=25% Similarity=0.355 Sum_probs=84.6
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHc------CCCHHHHHH
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQF------GLDDTQLED 456 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~------g~~~~~~~~ 456 (489)
+++++|..+|.|++|.|+++||..++........+..+..+|..+|.+++|.|+..|+...+... +...+++..
T Consensus 21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 100 (162)
T d1topa_ 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAN 100 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCcHHHHHH
Confidence 46778999999999999999998887766655667788899999999999999999986665322 123556788
Q ss_pred HHHHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 457 IIREVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 457 ~~~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
+|+.+|.|++|.|+.+||..+|...+..
T Consensus 101 aF~~~D~d~~G~Is~~e~~~~l~~~~~~ 128 (162)
T d1topa_ 101 CFRIFDKNADGFIDIEELGEILRATGEH 128 (162)
T ss_dssp HHHHHCTTCSSCBCHHHHHHHHHTTTCC
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHhhCCC
Confidence 9999999999999999999999876543
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.92 E-value=1.1e-09 Score=81.77 Aligned_cols=63 Identities=17% Similarity=0.392 Sum_probs=53.5
Q ss_pred HHHHhhcccc-cccCCC-cccHHHHHHHHHHcC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYF-DKDGSG-YITPDELQTACQQFG-------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~G-~I~~~El~~~l~~~g-------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..+|..| ++++++ +|+.+||+.+|+... .++..++++|+.+|.|+||+|+|+||+.+|..
T Consensus 8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 4577899888 556665 699999999997632 36789999999999999999999999999875
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.92 E-value=2.5e-09 Score=81.26 Aligned_cols=70 Identities=17% Similarity=0.275 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhhh-cCCCCC-CccHHHHHHHHHHh-----CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh
Q 040003 343 EEIAGLKEMFKMI-DTDNSG-YITLEELKKGLQRV-----GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN 412 (489)
Q Consensus 343 ~~~~~l~~~F~~~-D~d~~g-~i~~~el~~~l~~l-----g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~ 412 (489)
+.+..+..+|..+ |.|++| +|+.+||+.+|+.. +...+++++.++|+.+|.|+||.|+|+||+.++..+.
T Consensus 6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~ 82 (93)
T d3c1va1 6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 82 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence 4577889999998 666654 79999999999874 5567899999999999999999999999999887643
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=1.9e-09 Score=91.99 Aligned_cols=101 Identities=19% Similarity=0.344 Sum_probs=83.3
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-CCHHHHHHHHHccCCCCCcceehHHHHHHHHHhh-----hhhhHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGAN-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLN-----KIQREDHMY 421 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~-----~~~~~~~l~ 421 (489)
+..+|..+|.+++|.|+..||..++...... .....+..+++.+|.|++|.|+.+|+...+.... ....++.+.
T Consensus 50 ~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~ 129 (165)
T d1auib_ 50 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 129 (165)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHH
Confidence 4568899999999999999999998887544 3455689999999999999999999988775421 122355677
Q ss_pred hhcccccccCCCcccHHHHHHHHHHcC
Q 040003 422 AAFSYFDKDGSGYITPDELQTACQQFG 448 (489)
Q Consensus 422 ~~F~~~D~d~~G~I~~~El~~~l~~~g 448 (489)
.+|+.+|.|++|.|+.+||.+++..+.
T Consensus 130 ~~~~~~D~~~dG~Is~~EF~~i~~~~~ 156 (165)
T d1auib_ 130 KTIINADKDGDGRISFEEFCAVVGGLD 156 (165)
T ss_dssp HHHHHHCTTSSSSEEHHHHHHHHGGGC
T ss_pred HHHHHcCCCCCCcEeHHHHHHHHhcCC
Confidence 899999999999999999999987654
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.91 E-value=2.4e-10 Score=88.56 Aligned_cols=61 Identities=25% Similarity=0.401 Sum_probs=51.6
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC---------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG---------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g---------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+..+|+.|| +++|.|+.+||+.+|+..+ .++..++++|+.+|.|+||+|+|+||+.+|.+
T Consensus 11 ~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 11 GMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 4556777776 7899999999999998754 23456899999999999999999999999975
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.86 E-value=3e-09 Score=80.62 Aligned_cols=70 Identities=19% Similarity=0.290 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhhh-cCCCCC-CccHHHHHHHHHHhC-----CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMI-DTDNSG-YITLEELKKGLQRVG-----ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~-D~d~~g-~i~~~el~~~l~~lg-----~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
+..+..+..+|+.+ |.+++| +|+..||+.+|+... ....+.++.++++.+|.|+||.|+|+||+.++..+
T Consensus 5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34567788999887 999999 599999999998864 33568899999999999999999999999988754
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.84 E-value=2.6e-09 Score=89.07 Aligned_cols=64 Identities=28% Similarity=0.644 Sum_probs=60.7
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
+.+..+|+.+|.+++|.|+.+||+.+|..+|..+++.++..++..+|.|++|.|+|+||+..+.
T Consensus 81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~ 144 (146)
T d1m45a_ 81 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 144 (146)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence 4588899999999999999999999999999999999999999999999999999999998775
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.82 E-value=8.9e-09 Score=86.39 Aligned_cols=101 Identities=15% Similarity=0.178 Sum_probs=80.7
Q ss_pred HHHHHHHccCC--CCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC----CCHHHHHH
Q 040003 383 EIDGLMQAGDI--DNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG----LDDTQLED 456 (489)
Q Consensus 383 ~i~~l~~~~D~--d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~~~ 456 (489)
+++++|..+|. |++|.|+.+||..++..+....+++.+..+ ...|.+++|.|+.+||..++...- -+.+++.+
T Consensus 8 ~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~ 86 (152)
T d1wdcc_ 8 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYME 86 (152)
T ss_dssp HHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHH
T ss_pred HHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhh-hhhhccccccccccccccccccccccchhHHHhhhh
Confidence 35567888884 789999999999888765433445555554 456889999999999999886542 45788999
Q ss_pred HHHHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 457 IIREVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 457 ~~~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
+|+.+|.|++|.|+.+||..+|...|..
T Consensus 87 aF~~~D~~~~G~I~~~el~~~l~~~g~~ 114 (152)
T d1wdcc_ 87 AFKTFDREGQGFISGAELRHVLTALGER 114 (152)
T ss_dssp HHHTTCSSSSSEEEHHHHHHHHHHSSSC
T ss_pred hhhccccccCccchHHHHHHHHHHcCCC
Confidence 9999999999999999999999887654
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.82 E-value=2.2e-09 Score=80.63 Aligned_cols=69 Identities=25% Similarity=0.427 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhhh-cCCCCC-CccHHHHHHHHHH---hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMI-DTDNSG-YITLEELKKGLQR---VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~-D~d~~g-~i~~~el~~~l~~---lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..+..+|..+ |.+++| +|+..||+.+++. ++...++.+++++++.+|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 6 QAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 4567788999888 899998 6999999999987 4555677889999999999999999999999988654
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=7.8e-10 Score=87.07 Aligned_cols=71 Identities=23% Similarity=0.299 Sum_probs=62.7
Q ss_pred hccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 339 SLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 339 ~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.+++++...++++|+.+|.|++|+|+.+|++..|.+.| ++..++..+++.+|.|++|.|+++||+.+|.-+
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~Li 85 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHHHH
Confidence 46777889999999999999999999999999987765 456679999999999999999999999887543
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.81 E-value=1.3e-09 Score=94.60 Aligned_cols=101 Identities=25% Similarity=0.320 Sum_probs=85.7
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHH
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIRE 460 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~ 460 (489)
+++++|+.+|.|++|.|+++||..++..+........+..+|+.+|.+++|.|+.+++..++.... ...+++..+|+.
T Consensus 11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l~~aF~~ 90 (182)
T d1s6ia_ 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSY 90 (182)
T ss_dssp SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHHHHHHHH
Confidence 577899999999999999999999887655445567788999999999999999999988765433 345678899999
Q ss_pred hcCCCCCceeHHHHHHHHHhCCC
Q 040003 461 VDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 461 ~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
+|.+++|.|+.+||..++...++
T Consensus 91 ~D~d~~G~i~~~el~~~l~~~gl 113 (182)
T d1s6ia_ 91 FDKDGSGYITLDEIQQACKDFGL 113 (182)
T ss_dssp TTTTCSSEEEHHHHHHTTTTTTC
T ss_pred HhhcCCCccchhhhhhhhhhcCc
Confidence 99999999999999999887653
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.80 E-value=3.6e-09 Score=87.54 Aligned_cols=62 Identities=27% Similarity=0.569 Sum_probs=43.7
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHH
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAML 409 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~ 409 (489)
.++++|+.+|.+++|+|+.+||+.+|..+|..+++.+++.+++.+|.+ +|.|+|+||+..|.
T Consensus 77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~ 138 (140)
T d1ggwa_ 77 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred HHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence 456677777777777777777777777777667777777777777766 67777777776653
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=3.7e-09 Score=87.29 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=83.6
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccc--cCCCcccHHHHHHHHHHcCC-----CHHHHH
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDK--DGSGYITPDELQTACQQFGL-----DDTQLE 455 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~--d~~G~I~~~El~~~l~~~g~-----~~~~~~ 455 (489)
|+++.|..+|.|++|.|+++|+..++..+.....+..+..++..+|. +++|.|+.+|+..++..... ..+++.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 46788999999999999999999888776555566778888888774 68999999999998865431 234578
Q ss_pred HHHHHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 456 DIIREVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 456 ~~~~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
++|+.+|.|++|.|+.+||..+|...|..
T Consensus 81 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~ 109 (139)
T d1w7jb1 81 EGFRVFDKEGNGKVMGAELRHVLTTLGEK 109 (139)
T ss_dssp HHHHTTCTTSSSEEEHHHHHHHHHHSSSC
T ss_pred HhhhhccCCCCCeEeHHHHHHHHHHhCCC
Confidence 89999999999999999999999887654
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.79 E-value=5.8e-09 Score=90.93 Aligned_cols=65 Identities=28% Similarity=0.377 Sum_probs=57.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
..+..+|..+|.|++|+|+.+||..++..+|..++++++..+|+.+|.|+||.|+|+||+.++..
T Consensus 107 ~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~ 171 (189)
T d1qv0a_ 107 EWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 171 (189)
T ss_dssp HHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999988864
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.79 E-value=5.8e-10 Score=65.64 Aligned_cols=32 Identities=44% Similarity=0.831 Sum_probs=29.4
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g 448 (489)
++++++||+.||+|++|+|+.+||+.+|..+|
T Consensus 2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 57899999999999999999999999998765
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.77 E-value=9.7e-09 Score=89.21 Aligned_cols=66 Identities=27% Similarity=0.374 Sum_probs=61.4
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
...++.+|..+|.|++|+|+.+||+.+|..+|...+++++..+|+.+|.|++|.|+|+||+.++..
T Consensus 104 ~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~ 169 (187)
T d1uhka1 104 RIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 169 (187)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 445788999999999999999999999999999999999999999999999999999999987754
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.73 E-value=7e-09 Score=80.11 Aligned_cols=61 Identities=18% Similarity=0.248 Sum_probs=40.6
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhCCCC----------------CHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 348 LKEMFKMIDTDNSGYITLEELKKGLQRVGANL----------------MDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 348 l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~----------------~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
++.+|+.+|.|++|+|+.+||..+++.++... .+..+..+|+.+|.|+||.|+|+||+.++
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~ 94 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST 94 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 46789999999999999999999997653111 11234445555555555555555555543
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.73 E-value=4.8e-09 Score=78.48 Aligned_cols=69 Identities=14% Similarity=0.291 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhh-cCCCCCC-ccHHHHHHHHHH-hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMI-DTDNSGY-ITLEELKKGLQR-VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~-D~d~~g~-i~~~el~~~l~~-lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..+..+|+.+ |.|++|. ++.+||+.+|.. ++...+..+++.+++.+|.|+||.|+|+||+.++..+
T Consensus 7 ~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4567788899887 8889885 599999999976 5655666789999999999999999999999998764
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.73 E-value=8e-09 Score=87.05 Aligned_cols=99 Identities=23% Similarity=0.305 Sum_probs=75.9
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHh-C---CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRV-G---ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYA 422 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~l-g---~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~ 422 (489)
.+..++..++.+++|.++..++....... . ....+.++..+|+.+|.|++|.|+.+||..++.......+++++..
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~ 131 (156)
T d1dtla_ 52 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 131 (156)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHH
T ss_pred HHHHHHHHhhccCCCccchhhhhhhhhhcccccccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHH
Confidence 34456677888999999998887655432 2 2245667888999999999999999999877755555556777888
Q ss_pred hcccccccCCCcccHHHHHHHHH
Q 040003 423 AFSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 423 ~F~~~D~d~~G~I~~~El~~~l~ 445 (489)
+|+.+|.|+||.|+.+||.++|+
T Consensus 132 i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 132 LMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp HHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHHHhCCCCCCeEeHHHHHHHHc
Confidence 99999999999999999999886
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.70 E-value=1.1e-08 Score=85.08 Aligned_cols=66 Identities=26% Similarity=0.333 Sum_probs=59.7
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
...++.+|+.+|.+++|+|+..||+.+|+.+|..+++.++..+++.+|.|++|.|+|.||+..|.+
T Consensus 76 ~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~ 141 (145)
T d2mysb_ 76 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 141 (145)
T ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence 345788999999999999999999999999999999999999999999999999999999988753
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.70 E-value=3.6e-08 Score=73.31 Aligned_cols=69 Identities=22% Similarity=0.267 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhhh-cCCCCC-CccHHHHHHHHHHhC-----CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMI-DTDNSG-YITLEELKKGLQRVG-----ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~-D~d~~g-~i~~~el~~~l~~lg-----~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..+..+|..+ +.++++ +|+..||+.+|+... ...++..++++++.+|.|+||.|+|+||+.++..+
T Consensus 5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 4567788999887 445554 699999999998843 34467889999999999999999999999888654
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.69 E-value=4.8e-09 Score=80.96 Aligned_cols=70 Identities=17% Similarity=0.287 Sum_probs=58.4
Q ss_pred cHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCC-------CCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 341 SEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGAN-------LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 341 ~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~-------~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.+..+..+..+|+.++ +++|.|+..||+.+|+..+.. .++..++.+|+.+|.|+||.|+|+||+.++..+
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 81 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 3556778888999987 779999999999999987532 234568899999999999999999999988654
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.68 E-value=2.2e-08 Score=86.69 Aligned_cols=103 Identities=16% Similarity=0.219 Sum_probs=78.6
Q ss_pred HHHHHHHHHc-cCCCCCcceehHHHHHHHHHhhhh-------hh--------HHHHHhhcccccccCCCcccHHHHHHHH
Q 040003 381 DSEIDGLMQA-GDIDNSGTMDYGEFIAAMLHLNKI-------QR--------EDHMYAAFSYFDKDGSGYITPDELQTAC 444 (489)
Q Consensus 381 ~~~i~~l~~~-~D~d~~g~I~f~eF~~~~~~~~~~-------~~--------~~~l~~~F~~~D~d~~G~I~~~El~~~l 444 (489)
..++..+|.. +|.|++|.|+++||..++..+... .. .......+...|.+++|.|+.+++..++
T Consensus 7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~ 86 (185)
T d2sasa_ 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence 3568889987 599999999999998877543210 00 1122356778899999999999998887
Q ss_pred HHcC-----------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCC
Q 040003 445 QQFG-----------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGL 483 (489)
Q Consensus 445 ~~~g-----------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~ 483 (489)
.... .....+..+|+.+|.|++|.|+.+||..+|...++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l 136 (185)
T d2sasa_ 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL 136 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC
T ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC
Confidence 5431 12445889999999999999999999999986654
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.68 E-value=3.1e-08 Score=84.84 Aligned_cols=104 Identities=15% Similarity=0.227 Sum_probs=76.6
Q ss_pred HHHHHHHHHccCCCCCcceehHHHHHHHHHhhh-----hhhHH----HHHhhccc--ccccCCCcccHHHHHHHHHHcCC
Q 040003 381 DSEIDGLMQAGDIDNSGTMDYGEFIAAMLHLNK-----IQRED----HMYAAFSY--FDKDGSGYITPDELQTACQQFGL 449 (489)
Q Consensus 381 ~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~-----~~~~~----~l~~~F~~--~D~d~~G~I~~~El~~~l~~~g~ 449 (489)
.++++.+|+.+|.|++|.|+++||..++..+.. ..... .....|.. .|.+++|.|+.+|+..++.....
T Consensus 5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~ 84 (174)
T d2scpa_ 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK 84 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhc
Confidence 467889999999999999999999887754321 11111 11222332 37789999999999888866531
Q ss_pred ----C---HHHHHHHHHHhcCCCCCceeHHHHHHHHHhCCCC
Q 040003 450 ----D---DTQLEDIIREVDQDNDGRIDYSEFVAMMQDSGLG 484 (489)
Q Consensus 450 ----~---~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~~~~ 484 (489)
. ...+..+|+.+|.|+||.|+.+||..+++..+..
T Consensus 85 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~ 126 (174)
T d2scpa_ 85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLD 126 (174)
T ss_dssp CGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC
T ss_pred chhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhh
Confidence 1 3347789999999999999999999999876543
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.66 E-value=1.8e-08 Score=77.46 Aligned_cols=63 Identities=19% Similarity=0.347 Sum_probs=57.0
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 347 GLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 347 ~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.+.++|+.+|.|++|+|+.+|++.++...| ++..++..+++.+|.|++|.|+++||+.+|.-+
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li 74 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH
Confidence 567899999999999999999999998866 578899999999999999999999999888543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.61 E-value=1.3e-07 Score=86.41 Aligned_cols=86 Identities=17% Similarity=0.109 Sum_probs=62.1
Q ss_pred ceeecceeccCCceEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEEEEE
Q 040003 129 MYSLGRKLGQGQFGTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVM 208 (489)
Q Consensus 129 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 208 (489)
.|++.+..+.++.+.||+.. ..+..+.+|+........ ...+.+|..++..|..+--+.+++.+..+.+..|+||
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~---~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~ 89 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred ceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccc---hhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEE
Confidence 46666655555567899864 456678888875432221 2356789999998866655788898888899999999
Q ss_pred eecCCCchHHH
Q 040003 209 ELCAGGELFDR 219 (489)
Q Consensus 209 e~~~~g~L~~~ 219 (489)
++++|..+...
T Consensus 90 ~~l~G~~~~~~ 100 (263)
T d1j7la_ 90 SEADGVLCSEE 100 (263)
T ss_dssp ECCSSEEHHHH
T ss_pred Eeccccccccc
Confidence 99999877543
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.56 E-value=5.7e-08 Score=83.06 Aligned_cols=67 Identities=19% Similarity=0.294 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
......++.+|..+|.|++|.|+.+||+.++..++ .++.+++.+|..+|.|++|.|+|+||+.++..
T Consensus 98 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 98 RVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 34456678899999999999999999999999886 57889999999999999999999999988753
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.56 E-value=1.4e-08 Score=86.88 Aligned_cols=92 Identities=5% Similarity=0.027 Sum_probs=69.3
Q ss_pred cCCCCCcceehHHHHHHHHHhhh--hhhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCc
Q 040003 391 GDIDNSGTMDYGEFIAAMLHLNK--IQREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGR 468 (489)
Q Consensus 391 ~D~d~~g~I~f~eF~~~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~ 468 (489)
+|.|++|.|+++|+..++..... ....+.+..+|...|.+++|.|+.+||..++..+. ...++..+|..+|.|++|.
T Consensus 16 ~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~-~r~ei~~~F~~~d~d~~~~ 94 (170)
T d2zkmx1 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC-PRPEIDEIFTSYHAKAKPY 94 (170)
T ss_dssp HSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS-CCHHHHTTCC--------C
T ss_pred cccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC-CHHHHHHHHHHHcCCCCCc
Confidence 79999999999999888743221 12345677889999999999999999999998765 4678999999999999999
Q ss_pred eeHHHHHHHHHhCCC
Q 040003 469 IDYSEFVAMMQDSGL 483 (489)
Q Consensus 469 I~~~eF~~~~~~~~~ 483 (489)
|+.+||...|...+.
T Consensus 95 it~~el~~fL~~~Q~ 109 (170)
T d2zkmx1 95 MTKEHLTKFINQKQR 109 (170)
T ss_dssp CCHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHhc
Confidence 999999999986543
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.53 E-value=9.7e-08 Score=71.16 Aligned_cols=63 Identities=19% Similarity=0.470 Sum_probs=51.9
Q ss_pred HHHHhhcccc-cccCC-CcccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYF-DKDGS-GYITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~-G~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..+|..| .++|+ +.|+++||+.+++. +. -++..++++|+.+|.|+||+|+|+||+.++..
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 3566889888 45655 57999999999976 22 34678999999999999999999999998865
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.50 E-value=1e-07 Score=89.96 Aligned_cols=101 Identities=16% Similarity=0.331 Sum_probs=68.3
Q ss_pred HHHHHHHccCCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCccc--------------------------
Q 040003 383 EIDGLMQAGDIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYIT-------------------------- 436 (489)
Q Consensus 383 ~i~~l~~~~D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~-------------------------- 436 (489)
.+..+|..+|.|++|.|+++||..++........++.+..+|+.+|.|++|.|+
T Consensus 123 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F~~~d~d~~ 202 (321)
T d1ij5a_ 123 ILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSN 202 (321)
T ss_dssp HHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCHHHHCTTCC
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHHHHHhhccc
Confidence 356899999999999999999998876543333334444555555555555555
Q ss_pred ----HHHHHHHHHHcCCC-HH------------------------------HHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 437 ----PDELQTACQQFGLD-DT------------------------------QLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 437 ----~~El~~~l~~~g~~-~~------------------------------~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
..++...+...+.. .. .+..++..+|.|++|.|+.+||..+|...
T Consensus 203 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~ 282 (321)
T d1ij5a_ 203 GTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDA 282 (321)
T ss_dssp SEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHHHHHHHHHT
T ss_pred ccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcHHHHHHHHHHc
Confidence 44445555444421 11 12335778899999999999999999887
Q ss_pred CC
Q 040003 482 GL 483 (489)
Q Consensus 482 ~~ 483 (489)
++
T Consensus 283 ~~ 284 (321)
T d1ij5a_ 283 HI 284 (321)
T ss_dssp TC
T ss_pred CC
Confidence 65
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.45 E-value=6.7e-08 Score=54.00 Aligned_cols=33 Identities=36% Similarity=0.625 Sum_probs=28.5
Q ss_pred hHHHHHhhcccccccCCCcccHHHHHHHHHHcC
Q 040003 416 REDHMYAAFSYFDKDGSGYITPDELQTACQQFG 448 (489)
Q Consensus 416 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g 448 (489)
+++++.++|+.||+|.||+|+.+||..+++..|
T Consensus 2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~tG 34 (34)
T d1ctda_ 2 SEEELANAFRIFDKNADGYIDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence 467888999999999999999999999887543
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.43 E-value=9.4e-08 Score=71.88 Aligned_cols=63 Identities=24% Similarity=0.514 Sum_probs=51.2
Q ss_pred HHHHhhcccc-cccCC-CcccHHHHHHHHHH-c----C--CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYF-DKDGS-GYITPDELQTACQQ-F----G--LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~-G~I~~~El~~~l~~-~----g--~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..+|..| .++|+ +.|+.+||+.+|+. + + -++..++++|+.+|.|+||+|+|+||+.++..
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~ 80 (95)
T d1qlsa_ 9 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 80 (95)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 3456788877 45665 67999999999964 2 1 45678999999999999999999999998864
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.31 E-value=6.8e-07 Score=86.78 Aligned_cols=82 Identities=16% Similarity=0.196 Sum_probs=52.3
Q ss_pred cceeccCCceEEEEEEEcCCCcEEEEEEeecc-cC---CCHHHHHHHHHHHHHHHHhcCC--CCeeEEEEEEEeCCeEEE
Q 040003 133 GRKLGQGQFGTTFLCVEKATQKEFACKSIAKR-KL---TTEEDVEDVRREIRIMHHLAGH--PNVIQIVGAYEDAVAVHV 206 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~~~~~~avK~i~~~-~~---~~~~~~~~~~~E~~~l~~l~~h--pniv~~~~~~~~~~~~~l 206 (489)
.+.||.|....||++....+++.+++|.-... +. .......+..+|.++|+.+..+ ..+++++.+ +....++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 34689999999999987777888999964321 10 0111234566799999887544 345666644 4455678
Q ss_pred EEeecCCCch
Q 040003 207 VMELCAGGEL 216 (489)
Q Consensus 207 v~e~~~~g~L 216 (489)
|||++.+..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999987544
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.29 E-value=1.8e-06 Score=64.10 Aligned_cols=69 Identities=20% Similarity=0.348 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMID-TDNS-GYITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D-~d~~-g~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..+-.+|..+. .+++ +.++..||+.+|+. ++....+..++++|+.+|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 34567778888874 4443 57999999999987 3334456779999999999999999999999888654
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.29 E-value=5.1e-07 Score=67.68 Aligned_cols=63 Identities=22% Similarity=0.547 Sum_probs=49.4
Q ss_pred HHHHhhcccc-cccCC-CcccHHHHHHHHHH-cC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYF-DKDGS-GYITPDELQTACQQ-FG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~-D~d~~-G~I~~~El~~~l~~-~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..+|..| ..+|+ +.++++||+.+++. +. .++..++++++.+|.|+||+|+|+||+.++..
T Consensus 9 ~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 3566788887 34444 58999999999975 32 23567999999999999999999999998864
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.28 E-value=9.1e-07 Score=64.56 Aligned_cols=63 Identities=19% Similarity=0.520 Sum_probs=50.0
Q ss_pred HHHHhhccccc-ccC-CCcccHHHHHHHHHH-cC--C-----CHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 418 DHMYAAFSYFD-KDG-SGYITPDELQTACQQ-FG--L-----DDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 418 ~~l~~~F~~~D-~d~-~G~I~~~El~~~l~~-~g--~-----~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..+|..|. ++| .+.++..||+.+++. ++ + ++..++++++.+|.|+||+|+|+||+.++..
T Consensus 10 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 10 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 34667888884 344 368999999999975 32 2 3456899999999999999999999998853
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.09 E-value=8.2e-07 Score=51.91 Aligned_cols=31 Identities=32% Similarity=0.737 Sum_probs=28.4
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
++++++|+.||.|++|+|+..||+.+|+.+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 4789999999999999999999999998775
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.09 E-value=3.7e-06 Score=62.87 Aligned_cols=69 Identities=19% Similarity=0.311 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhhcC-CCC-CCccHHHHHHHHHHh-----CCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 343 EEIAGLKEMFKMIDT-DNS-GYITLEELKKGLQRV-----GANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 343 ~~~~~l~~~F~~~D~-d~~-g~i~~~el~~~l~~l-----g~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+..+-.+|..+.. +++ ++++..||+.+|..- +....+..++++++.+|.|+||.|+|+||+.++..+
T Consensus 6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 345567788888743 333 589999999999872 223345579999999999999999999999888654
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.07 E-value=3e-06 Score=63.47 Aligned_cols=68 Identities=22% Similarity=0.304 Sum_probs=53.9
Q ss_pred HHHHHHHHHhhhcC-CCC-CCccHHHHHHHHHH-----hCCCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 344 EIAGLKEMFKMIDT-DNS-GYITLEELKKGLQR-----VGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 344 ~~~~l~~~F~~~D~-d~~-g~i~~~el~~~l~~-----lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
.+..+-.+|..+.. +++ +.++..||+.+|.+ ++..-....++++|+.+|.|+||.|+|+||+.++..+
T Consensus 7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 7 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 45667778877643 443 58999999999876 4444456789999999999999999999999888654
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.03 E-value=7.7e-06 Score=73.84 Aligned_cols=74 Identities=12% Similarity=0.111 Sum_probs=52.1
Q ss_pred eccCCc-eEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCC-CCeeEEEEEEEeCCeEEEEEeecCC
Q 040003 136 LGQGQF-GTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGH-PNVIQIVGAYEDAVAVHVVMELCAG 213 (489)
Q Consensus 136 lG~G~f-g~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~~~~~~~~lv~e~~~~ 213 (489)
+..|.. +.||+... ..+..+.+|.-.... ...+.+|+..|+.|..+ -.+.+++.+..+.+..++||++++|
T Consensus 18 ~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G 90 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 90 (255)
T ss_dssp CSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred cCCcccCCeEEEEEe-CCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence 444543 67898764 456668888764332 13467888888888543 2367788888888899999999988
Q ss_pred Cch
Q 040003 214 GEL 216 (489)
Q Consensus 214 g~L 216 (489)
.++
T Consensus 91 ~~~ 93 (255)
T d1nd4a_ 91 QDL 93 (255)
T ss_dssp EET
T ss_pred ccc
Confidence 665
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.88 E-value=2.8e-05 Score=56.45 Aligned_cols=67 Identities=16% Similarity=0.254 Sum_probs=51.1
Q ss_pred HHHHHHHHHhhhcC-CC-CCCccHHHHHHHHHHh-CC----C-CCHHHHHHHHHccCCCCCcceehHHHHHHHHH
Q 040003 344 EIAGLKEMFKMIDT-DN-SGYITLEELKKGLQRV-GA----N-LMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 344 ~~~~l~~~F~~~D~-d~-~g~i~~~el~~~l~~l-g~----~-~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~ 410 (489)
.+..+-.+|..+.. ++ .+.++..||+.+|..- .. . ..+..++.+++.+|.|+||.|+|+||+.++..
T Consensus 8 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 8 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 45567778887754 22 3589999999999873 21 1 23456899999999999999999999987753
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.84 E-value=3e-06 Score=66.70 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=61.5
Q ss_pred hhccHHHHHHHHHHHhhhc---CCCCCCccHHHHHHHHHHhCCC--CCHHHHHHHHHccCCCCC--------cceehHHH
Q 040003 338 ESLSEEEIAGLKEMFKMID---TDNSGYITLEELKKGLQRVGAN--LMDSEIDGLMQAGDIDNS--------GTMDYGEF 404 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D---~d~~g~i~~~el~~~l~~lg~~--~~~~~i~~l~~~~D~d~~--------g~I~f~eF 404 (489)
..+++.++..+++.|+... .+++|.|+.++|+..+..+... .++.-++.||+.+|.+++ |.|+|.||
T Consensus 20 T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~ef 99 (118)
T d1tuza_ 20 MEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDV 99 (118)
T ss_dssp HHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHH
T ss_pred cCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHH
Confidence 3566777888888886542 3578899999999988876432 346678889999998876 78999999
Q ss_pred HHHHHHhhhhhhHHHH
Q 040003 405 IAAMLHLNKIQREDHM 420 (489)
Q Consensus 405 ~~~~~~~~~~~~~~~l 420 (489)
+.++..+.....+++|
T Consensus 100 v~~LS~l~~G~~eeKL 115 (118)
T d1tuza_ 100 SCYFSLLEGGRPEDKL 115 (118)
T ss_dssp HHHHHHHHSCCCSCCC
T ss_pred HHHHHHHcCCCHHHhh
Confidence 9888766555444444
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.69 E-value=3.2e-05 Score=43.01 Aligned_cols=31 Identities=35% Similarity=0.677 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhC
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVG 376 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg 376 (489)
++|.+.|+.||.|.+|+|+.+||..+|+..|
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~tG 34 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence 4677889999999999999999999887654
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=1.6e-05 Score=64.30 Aligned_cols=61 Identities=20% Similarity=0.242 Sum_probs=50.0
Q ss_pred HHHhhccccccc-CCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 419 HMYAAFSYFDKD-GSGYITPDELQTACQQFGLDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 419 ~l~~~F~~~D~d-~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
.+..-|..+|.| +||.|+..||+.+...+--.+.-+..+++.+|.|+||.|++.||..++.
T Consensus 78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred cceeehhhcCCCCCCCccCHHHHHHHHHhhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence 355679999999 6999999999886543322344478899999999999999999999985
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00053 Score=53.40 Aligned_cols=50 Identities=4% Similarity=0.034 Sum_probs=35.6
Q ss_pred cCCCcccHHHHHHHHHHc---C-CCHHHHHHHHHHhcCCCC--------CceeHHHHHHHHH
Q 040003 430 DGSGYITPDELQTACQQF---G-LDDTQLEDIIREVDQDND--------GRIDYSEFVAMMQ 479 (489)
Q Consensus 430 d~~G~I~~~El~~~l~~~---g-~~~~~~~~~~~~~d~d~d--------G~I~~~eF~~~~~ 479 (489)
+.+|.|+.++|+.++..+ | .++.-++.+|+.+|.|+| |.|+|.||+..|.
T Consensus 43 ~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~~LS 104 (118)
T d1tuza_ 43 VQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFS 104 (118)
T ss_dssp EETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHH
T ss_pred CcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHHHHH
Confidence 456777777777776644 2 235566777777777765 8899999998874
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.26 E-value=0.00038 Score=66.81 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=51.6
Q ss_pred cceeccCCceEEEEEEEcC-------CCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEeCCeEE
Q 040003 133 GRKLGQGQFGTTFLCVEKA-------TQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVH 205 (489)
Q Consensus 133 ~~~lG~G~fg~Vy~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 205 (489)
++.|+.|-.-.+|++.... ..+.|.+++... ... .....+|..+++.+..+.-..++++++.+ .
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~---~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g 117 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 117 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cch---hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence 3578889999999987653 235566766532 112 23456899999999766555688887753 5
Q ss_pred EEEeecCCCch
Q 040003 206 VVMELCAGGEL 216 (489)
Q Consensus 206 lv~e~~~~g~L 216 (489)
+||||++|..|
T Consensus 118 ~I~efi~g~~l 128 (395)
T d1nw1a_ 118 RLEEYIPSRPL 128 (395)
T ss_dssp EEECCCCEEEC
T ss_pred eEEEEeccccC
Confidence 89999987544
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.18 E-value=0.00053 Score=63.90 Aligned_cols=69 Identities=12% Similarity=0.162 Sum_probs=44.8
Q ss_pred eEEEEEEEcCCCcEEEEEEeecccCCCHHHHHHHHHHHHHHHHhcCCC-CeeEEE-----EEEEeCCeEEEEEeecCCCc
Q 040003 142 GTTFLCVEKATQKEFACKSIAKRKLTTEEDVEDVRREIRIMHHLAGHP-NVIQIV-----GAYEDAVAVHVVMELCAGGE 215 (489)
Q Consensus 142 g~Vy~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~-----~~~~~~~~~~lv~e~~~~g~ 215 (489)
-.||++.. .+|..|++|+.+.... ..+.+..|...|..|..+. -++..+ ..+...+..+.+++++.|..
T Consensus 36 N~vy~v~~-~dg~~~VlK~~rp~~~----s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 36 NRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp SEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred ceeEEEEc-CCCCEEEEEEeCCCCC----CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 57999865 5678899999764322 2356778999999885331 112111 12345677889999997743
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=96.50 E-value=0.0076 Score=39.61 Aligned_cols=74 Identities=14% Similarity=0.258 Sum_probs=61.4
Q ss_pred hhccHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCC-CC-CcceehHHHHHHHHHh
Q 040003 338 ESLSEEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI-DN-SGTMDYGEFIAAMLHL 411 (489)
Q Consensus 338 ~~~~~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~-d~-~g~I~f~eF~~~~~~~ 411 (489)
..+.+++.++..++|+.||.|....-...+-..+|.++|...+..+.+.+++..-- .+ ...|.-+||+.++...
T Consensus 6 ralgpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcskw 81 (86)
T d1j7qa_ 6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW 81 (86)
T ss_dssp CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred cccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence 35667788889999999999999999999999999999999999999999987532 12 2468899999887653
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.52 E-value=0.0011 Score=53.21 Aligned_cols=56 Identities=20% Similarity=0.315 Sum_probs=41.6
Q ss_pred HHhhhcCC-CCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCCCCCcceehHHHHHHH
Q 040003 351 MFKMIDTD-NSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAM 408 (489)
Q Consensus 351 ~F~~~D~d-~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~ 408 (489)
.|..+|.| .+|.|+..||......+ ...+.=+..+++.+|.|+||.|++.||..++
T Consensus 82 ~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf 138 (151)
T d1sraa_ 82 QFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCF 138 (151)
T ss_dssp HHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred ehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHHHc
Confidence 48889998 48899999887743222 2334447788888899999999999987765
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.42 E-value=0.012 Score=40.26 Aligned_cols=59 Identities=22% Similarity=0.427 Sum_probs=48.4
Q ss_pred hhHHHHHhhcccccccCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhcC-----CCCCceeHHHHHHHHH
Q 040003 415 QREDHMYAAFSYFDKDGSGYITPDELQTACQQFGLDDTQLEDIIREVDQ-----DNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 415 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~d~-----d~dG~I~~~eF~~~~~ 479 (489)
++.+.+.++|+.+ .++..+|+.+||++- ++.++++.++..|-. -..|..+|..|+..|-
T Consensus 5 ~TaEqv~~aFr~l-A~~KpyVT~~dL~~~-----L~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ 68 (73)
T d1h8ba_ 5 DTAEQVIASFRIL-ASDKPYILAEELRRE-----LPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 68 (73)
T ss_dssp STHHHHHHHHHHH-TTSCSSBCHHHHHHH-----SCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred ccHHHHHHHHHHH-hCCCCeeCHHHHHhh-----cCHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHh
Confidence 4567788999999 678999999999874 678889999999853 2467899999998774
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.00 E-value=0.02 Score=52.26 Aligned_cols=30 Identities=33% Similarity=0.500 Sum_probs=24.8
Q ss_pred CCCeecCCCCCCEeeeeCCCCCCeEEEeecccc
Q 040003 248 LGVMHRDLKPENFLFINQQEEAPLKTIDFGLSM 280 (489)
Q Consensus 248 ~~iiHrDlKp~Nill~~~~~~~~~kl~DFGla~ 280 (489)
.||||+|+.++||++ +.+...-|+||+.|.
T Consensus 183 ~giIHgDl~~dNvl~---~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFF---LGDELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEE---ETTEEEEECCCTTCE
T ss_pred cccccCCcchhhhhc---ccccceeEecccccc
Confidence 479999999999999 444556899999885
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.67 E-value=0.022 Score=41.88 Aligned_cols=62 Identities=11% Similarity=0.134 Sum_probs=47.7
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc-C---CCHHHHHHHHHHhcCCC----CCceeHHHHHHHHH
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF-G---LDDTQLEDIIREVDQDN----DGRIDYSEFVAMMQ 479 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g---~~~~~~~~~~~~~d~d~----dG~I~~~eF~~~~~ 479 (489)
..++..+|+.+- ++.+.++.++|...|... + ++++.+.++|..+..+. .|.+++++|..+|.
T Consensus 7 R~ei~~if~~ys-~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~ 76 (94)
T d1qasa1 7 RAEIDRAFEEAA-GSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLL 76 (94)
T ss_dssp CHHHHHHHHHHH-TTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHH
T ss_pred cHHHHHHHHHHh-CCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHc
Confidence 345677787773 445679999999999764 3 57778899999987653 47899999999996
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=92.64 E-value=0.053 Score=35.77 Aligned_cols=48 Identities=23% Similarity=0.416 Sum_probs=26.8
Q ss_pred cccCCCcccHHHHHHHHHHc-C---CCHHHHHHHHHHhcCCCCCceeHHHHHHHHH
Q 040003 428 DKDGSGYITPDELQTACQQF-G---LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQ 479 (489)
Q Consensus 428 D~d~~G~I~~~El~~~l~~~-g---~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~ 479 (489)
|.|+||.|+..++..+.+.+ + +++.+ +..+|.|+||.|+-.+...+++
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~~----~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTDDA----KARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHHH----HHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCChhh----hhccccCCCCCCCHHHHHHHHH
Confidence 55666666666665555432 2 22222 3446666666666666665554
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=92.12 E-value=0.27 Score=31.96 Aligned_cols=64 Identities=17% Similarity=0.359 Sum_probs=51.2
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhc-CCCC-CceeHHHHHHHHHh
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQFG--LDDTQLEDIIREVD-QDND-GRIDYSEFVAMMQD 480 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~d-~d~d-G~I~~~eF~~~~~~ 480 (489)
.++...+|..||.|....-...+-..+|..+| ++..+.+.++++.- ..+| -.|.-+||+.++.+
T Consensus 13 kdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcsk 80 (86)
T d1j7qa_ 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence 34566799999999999999999999999999 67899999999873 2222 35888999988753
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.64 E-value=0.31 Score=35.29 Aligned_cols=64 Identities=16% Similarity=0.146 Sum_probs=48.2
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhCC--CCCHHHHHHHHHccCCCC----CcceehHHHHHHHHH
Q 040003 346 AGLKEMFKMIDTDNSGYITLEELKKGLQRVGA--NLMDSEIDGLMQAGDIDN----SGTMDYGEFIAAMLH 410 (489)
Q Consensus 346 ~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~--~~~~~~i~~l~~~~D~d~----~g~I~f~eF~~~~~~ 410 (489)
.++..+|..+..+ .+.++.++|...|..... ..++..+..++..+..+. .+.+++++|+..+..
T Consensus 8 ~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S 77 (94)
T d1qasa1 8 AEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 77 (94)
T ss_dssp HHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred HHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence 3466778777654 468999999999988643 357788888998886553 367999999888764
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=88.24 E-value=0.062 Score=36.94 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=23.3
Q ss_pred CCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHHH
Q 040003 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQQ 446 (489)
Q Consensus 392 D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 446 (489)
|.|+||.|+..+...++..+..... ..-+...|.|+||.|+..++..+++.
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~----~~~~~~aDvn~DG~Id~~D~~~l~~~ 58 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGI----SINTDNADLNEDGRVNSTDLGILKRY 58 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCS----CCCGGGTCSSSSSSCSSHHHHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCC----cCCCcceecCCCCCcCHHHHHHHHHH
Confidence 5556666666555444332211100 01122346666666666665555443
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=87.75 E-value=0.21 Score=34.08 Aligned_cols=50 Identities=12% Similarity=0.206 Sum_probs=33.8
Q ss_pred cccCCCcccHHHHHHHHHHc-CC-CHHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 428 DKDGSGYITPDELQTACQQF-GL-DDTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 428 D~d~~G~I~~~El~~~l~~~-g~-~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
|.|+||.|+..++..+++.+ +. +..+ ...+|.|+||.|+..++..+.+..
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~----~~~aDvn~DG~Id~~D~~~l~~~i 59 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGISIN----TDNADLNEDGRVNSTDLGILKRYI 59 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCSCCC----GGGTCSSSSSSCSSHHHHHHHHHT
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCCcCC----CcceecCCCCCcCHHHHHHHHHHH
Confidence 77888888888877776654 32 1111 124688888888888888777654
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=86.98 E-value=0.25 Score=32.35 Aligned_cols=52 Identities=15% Similarity=0.175 Sum_probs=26.2
Q ss_pred CCCCCcceehHHHHHHHHHhhhhhhHHHHHhhcccccccCCCcccHHHHHHHHH
Q 040003 392 DIDNSGTMDYGEFIAAMLHLNKIQREDHMYAAFSYFDKDGSGYITPDELQTACQ 445 (489)
Q Consensus 392 D~d~~g~I~f~eF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~ 445 (489)
|.|+||.|+....+............ -...|...|.|+||.|+..++..+.+
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~--~~~~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITL--TDDAKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCC--CHHHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCC--ChhhhhccccCCCCCCCHHHHHHHHH
Confidence 45666666666655444322111100 00124445777777777777666554
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.30 E-value=1.4 Score=29.66 Aligned_cols=58 Identities=21% Similarity=0.382 Sum_probs=42.4
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHccCC-----CCCcceehHHHHHHHHH
Q 040003 345 IAGLKEMFKMIDTDNSGYITLEELKKGLQRVGANLMDSEIDGLMQAGDI-----DNSGTMDYGEFIAAMLH 410 (489)
Q Consensus 345 ~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg~~~~~~~i~~l~~~~D~-----d~~g~I~f~eF~~~~~~ 410 (489)
.+++.+.|+.+ .+++.+|+.+||+..| +.++++-+++.+-. ...|..||..|...+..
T Consensus 7 aEqv~~aFr~l-A~~KpyVT~~dL~~~L-------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g 69 (73)
T d1h8ba_ 7 AEQVIASFRIL-ASDKPYILAEELRREL-------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG 69 (73)
T ss_dssp HHHHHHHHHHH-TTSCSSBCHHHHHHHS-------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred HHHHHHHHHHH-hCCCCeeCHHHHHhhc-------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence 35567788888 5668899999997655 45677777777642 13578999999887653
|
| >d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Protein cgi-38 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.37 E-value=1.5 Score=33.78 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=47.7
Q ss_pred HHHHHhhhcCCC-----CCCccHHHHHHHHHHhC----CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 348 LKEMFKMIDTDN-----SGYITLEELKKGLQRVG----ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 348 l~~~F~~~D~d~-----~g~i~~~el~~~l~~lg----~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
|+.+|..|..=+ ...++...|..+++..+ ..++..+++-+|..+-.-+...|+|++|+.++..+
T Consensus 10 L~~~F~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~i 82 (138)
T d1wlma1 10 LEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL 82 (138)
T ss_dssp HHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 555666665322 23599999999999864 35788999999998766667789999999887543
|
| >d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Protein cgi-38 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.50 E-value=2 Score=33.13 Aligned_cols=62 Identities=16% Similarity=0.394 Sum_probs=42.9
Q ss_pred HHHhhcccccc-cCCC-cccHHHHHHHHHHcC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 419 HMYAAFSYFDK-DGSG-YITPDELQTACQQFG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 419 ~l~~~F~~~D~-d~~G-~I~~~El~~~l~~~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
..+..|..|.. -.+| .++..-|..+|++.+ ++..+++-+|...-.-+...|+|++|..+|..
T Consensus 12 ~~F~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~ 81 (138)
T d1wlma1 12 ESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEE 81 (138)
T ss_dssp HHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCcccCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHH
Confidence 34455555542 1232 488888888888876 45677888888876556677999999888754
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=83.33 E-value=1.7 Score=31.61 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=43.7
Q ss_pred HHHhhcccccccCCCcccHHHHHHHHHHcC------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHHh
Q 040003 419 HMYAAFSYFDKDGSGYITPDELQTACQQFG------LDDTQLEDIIREVDQDNDGRIDYSEFVAMMQD 480 (489)
Q Consensus 419 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g------~~~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~ 480 (489)
.+.++|..|-.-..-.++..-+..+|+..+ ++...++-+|..+-..+ ..|+|++|...|..
T Consensus 9 ~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~ 75 (103)
T d1pula1 9 KRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAF 75 (103)
T ss_dssp HHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHH
Confidence 344566666422222589999999998865 56788999999886544 56999999988853
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=83.30 E-value=4 Score=29.53 Aligned_cols=69 Identities=9% Similarity=0.090 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhC----CCCCHHHHHHHHHccCCCCCcceehHHHHHHHHHh
Q 040003 342 EEEIAGLKEMFKMIDTDNSGYITLEELKKGLQRVG----ANLMDSEIDGLMQAGDIDNSGTMDYGEFIAAMLHL 411 (489)
Q Consensus 342 ~~~~~~l~~~F~~~D~d~~g~i~~~el~~~l~~lg----~~~~~~~i~~l~~~~D~d~~g~I~f~eF~~~~~~~ 411 (489)
..+++.....|..|-.-....++-..|..+++..+ ..++..+++-+|..+-.. ..+|+|++|..++-.+
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k-~~ri~f~~F~~aL~~l 76 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGP-KKKATFDETKKVLAFV 76 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCS-SSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCC-CCCcCHHHHHHHHHHH
Confidence 45666677777777643334799999999998854 458889999999988544 4569999999888543
|
| >d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Dystrophin species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.65 E-value=3.1 Score=29.68 Aligned_cols=62 Identities=16% Similarity=0.235 Sum_probs=46.4
Q ss_pred HHHHHhhcccccccCCCcccHHHHHHHHHHc-------------CCC--HHHHHHHHHHhcCCCCCceeHHHHHHHHHhC
Q 040003 417 EDHMYAAFSYFDKDGSGYITPDELQTACQQF-------------GLD--DTQLEDIIREVDQDNDGRIDYSEFVAMMQDS 481 (489)
Q Consensus 417 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------------g~~--~~~~~~~~~~~d~d~dG~I~~~eF~~~~~~~ 481 (489)
+++++.+|+.+ .|.+|.++..-|..+|+++ |.+ +..+...|... .+...|+-++|++.|...
T Consensus 3 ~dKyRYlF~qi-sd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~--~~~~~i~~~~FL~wl~~e 79 (97)
T d1eg3a2 3 EDKYRYLFKQV-ASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA--NNKPEIEAALFLDWMRLE 79 (97)
T ss_dssp HHHHHHHHHHH-SCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHT--TTCSCBCHHHHHHHHHTC
T ss_pred HHHHHHHHHHH-hCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhcc--CCCCcccHHHHHHHHHhC
Confidence 56788899998 6899999999988888653 334 45667777643 345569999999988754
|