Citrus Sinensis ID: 040056

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530------
MQFSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPRL
cccccccHHHHHHHcccHHHHHHHHHcccHHHHHHccccccccHHHHHHHcccHHHHHHHHHcccHHHHHccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHcccccHHccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHccccHHHHHHHHccccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
cccccccHHHHHHHcccHHHHHHHHHccccHHcHHHcccccccHHHHHHHcccHHHHHHHHHccccHHHHccccccccHHHHHHHcccHHHHHHHHHccccHccccccccccHHHHHHHcccHHHHHHHHHccccHccccccccHHHHHHHcccHHHHHHHHHccccHHHHHccccccHHHHHHcccccHHHHHHccccccHcccccHHHHHHHHHHccHHHHEcccccccccccccccHHHHHHHcccHHHHHHHHHccccHHcccccccccHHHHHHHcccHHHHHHHHHcccccccEEcccccccccHHHHHHHcccHHHHHHHHccHHHHHHHcccccHHHHHHccHHHHHHHHcccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEccccHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
MQFSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLnfmdpedlilqdengnTAFCFAAAAGAVDIANLMlkknpsllgirgsknmpplYFAAlfgqtdtasflfhrskkelttedrkVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGtalhmlarnpspfadtVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHlaakyptlspyrtvsGAALEMQRELLIYKEVEMIVQpsykemknydgktprelfTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAftvpggkddktglpihlreNWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLqvpvlkdifcstccprl
MQFSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRskkelttedrkvifiTSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSykemknydgktpRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPRL
MQFSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTafcfaaaagaVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIvatlvatmvfaaaftvPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFlmslplkllgglsalFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPRL
***SIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCC***
*QFSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSK******DRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRE*****************KSRASSGMIVATLVATMVFAAAFTVPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPRL
MQFSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPRL
***SIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPR*
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MQFSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDDKTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPRL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query536 2.2.26 [Sep-21-2011]
Q9C7A2590 Ankyrin repeat-containing no no 0.791 0.718 0.214 6e-10
Q8BTI7 1076 Serine/threonine-protein no no 0.440 0.219 0.233 3e-06
Q6AWW5524 Ankyrin repeat-containing no no 0.766 0.784 0.214 3e-06
Q4UMH61179 Putative ankyrin repeat p yes no 0.541 0.245 0.243 3e-06
Q5ZLC8 1073 Serine/threonine-protein yes no 0.438 0.219 0.225 8e-06
Q9FY48 1625 E3 ubiquitin-protein liga no no 0.615 0.203 0.196 3e-05
Q8Q0U0360 Putative ankyrin repeat p yes no 0.180 0.269 0.346 0.0001
Q502K3 1071 Serine/threonine-protein no no 0.449 0.225 0.223 0.0002
Q8C8R3 3898 Ankyrin-2 OS=Mus musculus yes no 0.537 0.073 0.246 0.0006
Q8N8A2 993 Serine/threonine-protein no no 0.442 0.238 0.237 0.0008
>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1 Back     alignment and function desciption
 Score = 66.2 bits (160), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 111/518 (21%), Positives = 200/518 (38%), Gaps = 94/518 (18%)

Query: 14  LKGEMKEIEGLLE--------KDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMD 65
           LK    ++EG+L          + R+ +   + +  ET L  A        V++LL +  
Sbjct: 94  LKDINSQMEGILSGEEFDAEVAEIRASIVNEVNELGETALFTAADKGHLDVVKELLKYSS 153

Query: 66  PEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDT 125
            E +  ++ +G      AA  G   I  ++L  + +L    G  N  PL  AA+ G T+ 
Sbjct: 154 RESIAKKNRSGYDPLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEV 213

Query: 126 ASFLFHRSKK--ELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHML 183
            + L  ++    E++  + K     +   G  ++   LL  D QLA     +  TALHM 
Sbjct: 214 VNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMA 273

Query: 184 ARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWR---EIVRQEDVDVAEAIRKPTNL 240
            +                        Q+ E+VK L      IV Q D        K  N 
Sbjct: 274 VK-----------------------GQSSEVVKLLLDADPAIVMQPD--------KSCNT 302

Query: 241 LFDAAKVGNIQFLAELIGSYPDL-VHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQL 299
               A       + EL+ S PD   + L  + ++   +A              +G     
Sbjct: 303 ALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIA--------------EGLPLSE 348

Query: 300 LATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELL------IYKEVEMIVQPSYK 353
            ++Y+  C             L+    +    L   R+ L      I  +V + ++ + +
Sbjct: 349 ESSYIKEC-------------LARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKR 395

Query: 354 EMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDD 413
             KN          + E  +L R G   + +  +S  +VA L AT+ FAA FTVPGG D+
Sbjct: 396 TNKNVHN------ISKELRKLHREG---INNATNSVTVVAVLFATVAFAAIFTVPGG-DN 445

Query: 414 KTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLS 473
             G  + +    F++F I +A+A   S+  V+  ++++  +   +  ++ +  KL     
Sbjct: 446 NDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINKL----- 500

Query: 474 ALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFV 511
            ++++ +   VAF ++ ++       W   L  +V  V
Sbjct: 501 -MWLASMCTSVAFLASSYIVVGRKNEWAAELVTVVGGV 537

Arabidopsis thaliana (taxid: 3702)
>sp|Q8BTI7|ANR52_MOUSE Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Mus musculus GN=Ankrd52 PE=2 SV=1 Back     alignment and function description
>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1 Back     alignment and function description
>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1 Back     alignment and function description
>sp|Q5ZLC8|ANR52_CHICK Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Gallus gallus GN=ANKRD52 PE=2 SV=1 Back     alignment and function description
>sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2 Back     alignment and function description
>sp|Q8Q0U0|Y045_METMA Putative ankyrin repeat protein MM_0045 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_0045 PE=4 SV=1 Back     alignment and function description
>sp|Q502K3|ANR52_DANRE Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Danio rerio GN=ankrd52 PE=2 SV=1 Back     alignment and function description
>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2 Back     alignment and function description
>sp|Q8N8A2|ANR44_HUMAN Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query536
359472754 789 PREDICTED: ankyrin repeat-containing pro 0.970 0.659 0.466 1e-126
359483665 762 PREDICTED: ankyrin repeat-containing pro 0.983 0.691 0.445 1e-126
147860696 891 hypothetical protein VITISV_011174 [Viti 0.973 0.585 0.457 1e-124
225425076563 PREDICTED: ankyrin repeat-containing pro 0.919 0.875 0.462 1e-122
356532648 739 PREDICTED: uncharacterized protein LOC10 0.988 0.717 0.454 1e-122
297737987 1855 unnamed protein product [Vitis vinifera] 0.942 0.272 0.458 1e-121
147784800 1697 hypothetical protein VITISV_029434 [Viti 0.970 0.306 0.432 1e-121
356558266584 PREDICTED: uncharacterized protein LOC10 0.957 0.878 0.447 1e-120
356532642590 PREDICTED: ankyrin repeat-containing pro 0.962 0.874 0.453 1e-119
359473665602 PREDICTED: LOW QUALITY PROTEIN: ankyrin 0.983 0.875 0.445 1e-118
>gi|359472754|ref|XP_002276402.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/534 (46%), Positives = 349/534 (65%), Gaps = 14/534 (2%)

Query: 7   LLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDP 66
           +LL  A+L G+ K  +  LE + +++  A IT   ET LH+A GA+ T FV++L+  M P
Sbjct: 176 VLLCLAALNGDWKSAKAFLESNPQAVR-ARITRRSETALHIAAGARHTRFVEELVKLMKP 234

Query: 67  EDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTA 126
           +DL LQ++ GNTA CFAAA+G   IA +M+ KN  L  IRGSK + PLY AAL G  D  
Sbjct: 235 DDLALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLYMAALVGHKDMV 294

Query: 127 SFLFHRSKKE-LTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLAR 185
            +L+  ++++ LT EDR  + + ++   L+D+AL +L  D +LA+       TALH+LAR
Sbjct: 295 RYLYSVTEEDNLTKEDRIGLLVAAITANLFDVALHMLHEDPELAMARDGNGDTALHVLAR 354

Query: 186 NPSPF-ADTVLGI----------MKCSRNIELMNNQALELVKCLWREIVR-QEDVDVAEA 233
            P  F + + LGI           K   + +LM+ QALELV+ LW +I+    D  + E 
Sbjct: 355 KPLAFYSGSQLGIWHRCIYSFPGFKSVYDKKLMHIQALELVQQLWDKILSLDHDPKIGEL 414

Query: 234 IRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQ 293
           IR P+ LLF AA++G ++F+  LI SYPDL+ ++++  ++IFHVA+ HR   IFNLIYE 
Sbjct: 415 IRTPSRLLFTAAELGIVEFITVLIRSYPDLIWKVNDQSQTIFHVAVAHRQEKIFNLIYEI 474

Query: 294 GFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYK 353
           G +K  +A Y D   NN+LHLA K    +  +  SGAA ++QREL  +KEVE I+QPSY 
Sbjct: 475 GAHKDYIAAYKDEKNNNMLHLAGKLAPSNRLKIDSGAAFQLQRELHWFKEVEKIIQPSYT 534

Query: 354 EMKNYDGKTPRELFTVEHLELLRRGEQWMKSRASSGMIVATLVATMVFAAAFTVPGGKDD 413
           EMKN  G+TP+ LFT EH +L+R GE+WMK  ASS M+VATL+AT++FAAAF+VPGG DD
Sbjct: 535 EMKNEQGRTPQILFTEEHKDLVREGEKWMKDTASSCMVVATLIATVMFAAAFSVPGGNDD 594

Query: 414 KTGLPIHLRENWFQVFAIADAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLS 473
            TG PI L +  F VFAI+DA+A   S  S+L FLSILTS++AE+DFL SLP +L+ GL+
Sbjct: 595 DTGRPIFLTKKSFLVFAISDALALFSSATSILIFLSILTSRYAEEDFLESLPNRLIIGLA 654

Query: 474 ALFVSIVFVMVAFFSTFFLAYDHGVNWIVVLSGLVAFVPTVVIALLQVPVLKDI 527
            LF+S+  +M+AF +T F+     + W+     LVA VP  +  LL+ P+  D+
Sbjct: 655 TLFISVATMMIAFCATLFIVLGPELVWVANPMALVACVPVTLFPLLKFPLFIDM 708

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359483665|ref|XP_003632996.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147860696|emb|CAN81449.1| hypothetical protein VITISV_011174 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225425076|ref|XP_002271486.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356532648|ref|XP_003534883.1| PREDICTED: uncharacterized protein LOC100814269 [Glycine max] Back     alignment and taxonomy information
>gi|297737987|emb|CBI27188.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147784800|emb|CAN68568.1| hypothetical protein VITISV_029434 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356558266|ref|XP_003547428.1| PREDICTED: uncharacterized protein LOC100814409 [Glycine max] Back     alignment and taxonomy information
>gi|356532642|ref|XP_003534880.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Glycine max] Back     alignment and taxonomy information
>gi|359473665|ref|XP_003631341.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query536
TAIR|locus:2180228625 AT5G04690 "AT5G04690" [Arabido 0.912 0.782 0.308 9.9e-55
TAIR|locus:2175413669 AT5G04700 "AT5G04700" [Arabido 0.649 0.520 0.336 8.4e-54
TAIR|locus:2165174347 AT5G35810 "AT5G35810" [Arabido 0.583 0.902 0.373 5.1e-51
TAIR|locus:2080240574 AT3G54070 "AT3G54070" [Arabido 0.776 0.724 0.315 1.5e-49
TAIR|locus:2175448603 AT5G04730 "AT5G04730" [Arabido 0.625 0.555 0.338 3.7e-46
TAIR|locus:2165194282 AT5G35830 [Arabidopsis thalian 0.270 0.514 0.342 2.8e-18
TAIR|locus:2128781677 AT4G03460 "AT4G03460" [Arabido 0.138 0.109 0.302 2e-06
TAIR|locus:2128791683 AT4G03470 [Arabidopsis thalian 0.263 0.206 0.264 1.2e-05
UNIPROTKB|F1M5N3 3838 Ank2 "Protein Ank2" [Rattus no 0.559 0.078 0.237 0.00012
TAIR|locus:2046628601 AT2G24600 "AT2G24600" [Arabido 0.488 0.435 0.235 0.00019
TAIR|locus:2180228 AT5G04690 "AT5G04690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 159/515 (30%), Positives = 254/515 (49%)

Query:    41 HETVLHVATGAKRTSFVQQLLNFMDPEDLILQ-DENG--NTXXXXXXXXXXVDIANLMLK 97
             +ET L  A        V+ LL  M PE ++ +  +N   NT          ++IA  ++ 
Sbjct:   109 YETPLLKACAYGNPEIVKLLLRRMTPEQMLPKMSQNNFYNTPLTVVAVSGNMEIAEALVA 168

Query:    98 KNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRK----VIFITSVDTG 153
             KNP LL I G+    P+  A    Q + A +L++R+  ++  E       ++F+ ++   
Sbjct:   169 KNPKLLEIPGNNGEIPVVVAVENTQMEMARYLYNRTPVQVLLEKDGFHGILLFLNAIYYK 228

Query:   154 LYDLALKLLKSDRQLALTHHVQ-HGTALHMLARNPSPFADTVLG-IMKC-SR-------- 202
               D+AL L    R+LA+T H++     + +LA  P  F DT++G ++KC S+        
Sbjct:   229 KLDMALDLFNKSRRLAVTKHLRIESVPIIVLASKPDLFPDTLMGKVLKCLSKCIGIDEVY 288

Query:   203 NIELMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPD 262
              +++M+ QA +L+K +  E +     + +E++ +   LLF A + GN+ FL E+I +  +
Sbjct:   289 RLKVMHLQAKKLLKGISEETLALGLKERSESVDEA--LLF-AVRYGNVDFLVEMIKNNSE 345

Query:   263 LVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLS 322
             L+     +  ++F+ A+  R   +F+L+Y  G  K L     DS GN++LHLA   P   
Sbjct:   346 LLWSTGTS--TLFNTAVQVRQEKVFSLLYGLGDRKYLFLADKDSDGNSVLHLAGYPPPNY 403

Query:   323 PYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVEHLELLRRGEQWM 382
                TV  A L+MQREL  +KE+E IV     E  N +  TP E+F  EH  +    E+WM
Sbjct:   404 KLATVVSATLQMQRELQWFKEMERIVPAIENERVNTENLTPIEIFRKEHEAMRLEAEKWM 463

Query:   383 KSRASSGMIXXXXXXXXXXXXXXXXPGGKDDKTG-LPIHLRENWFQVFAIADAIAFSCSI 441
             K  A S  +                PGG DD +G  P H  E  F +F ++D I+   + 
Sbjct:   464 KDTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGRPFHRHERIFVIFIVSDLISCFAAC 523

Query:   442 ISVLFFLSILTSQFAEDDFXXXXXXXXXXXXXXXFVSIVFVMVAFFSTFFLAYDHGVNWI 501
              SVL FL ILT+++A DDF               FVSI  ++VAF S  F  ++    WI
Sbjct:   524 TSVLIFLGILTARYAFDDFLFSLPANMIAGLSTLFVSIAAMLVAFSSALFTIFNDP--WI 581

Query:   502 VVLSGLVAFVPTVVIALLQVPVLKDIFCSTCCPRL 536
             V  +   A  P ++  ++Q P+LK++  ST   R+
Sbjct:   582 VAPTIFFACFPALLFVMIQYPLLKELIFSTYGKRI 616
GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2175413 AT5G04700 "AT5G04700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165174 AT5G35810 "AT5G35810" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175448 AT5G04730 "AT5G04730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165194 AT5G35830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128781 AT4G03460 "AT4G03460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128791 AT4G03470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1M5N3 Ank2 "Protein Ank2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
TAIR|locus:2046628 AT2G24600 "AT2G24600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query536
pfam13962114 pfam13962, PGG, Domain of unknown function 2e-24
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 1e-08
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 1e-07
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 2e-05
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 2e-05
COG0666235 COG0666, Arp, FOG: Ankyrin repeat [General functio 5e-05
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 2e-04
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 6e-04
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 0.001
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 0.002
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 0.002
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 0.002
>gnl|CDD|222475 pfam13962, PGG, Domain of unknown function Back     alignment and domain information 
 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 13/120 (10%)

Query: 379 EQWMKSRASSGMIVATLVATMVFAAAFTVPGG-----KDDKTGLPIHL-RENWFQVFAIA 432
            +W++   +S ++VATL+AT+ FAA FT PGG          G PI   +   F+ F ++
Sbjct: 1   SEWLEKTRNSLLVVATLIATVTFAAGFTPPGGYWQDDGGHHAGTPILAGKPRRFKAFFVS 60

Query: 433 DAIAFSCSIISVLFFLSILTSQFAEDDFLMSLPLKLLGGLSALFVSIVFVMVAFFSTFFL 492
           + IAF  S+++V+  L I+        F   LP +LL  L+ L++S++ +MVAF +  + 
Sbjct: 61  NTIAFVASLVAVILLLYIV------PSFSRRLP-RLLALLTLLWLSLLSLMVAFAAGSYR 113

The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 536
KOG0510 929 consensus Ankyrin repeat protein [General function 100.0
PHA02946446 ankyin-like protein; Provisional 100.0
PHA02876682 ankyrin repeat protein; Provisional 100.0
PHA02876682 ankyrin repeat protein; Provisional 100.0
PHA02946446 ankyin-like protein; Provisional 100.0
PHA02874434 ankyrin repeat protein; Provisional 100.0
PHA02716764 CPXV016; CPX019; EVM010; Provisional 100.0
KOG0510 929 consensus Ankyrin repeat protein [General function 100.0
PHA03095471 ankyrin-like protein; Provisional 100.0
PHA02716764 CPXV016; CPX019; EVM010; Provisional 100.0
PHA02730672 ankyrin-like protein; Provisional 100.0
PHA02874434 ankyrin repeat protein; Provisional 100.0
PHA03100480 ankyrin repeat protein; Provisional 100.0
PHA03100480 ankyrin repeat protein; Provisional 100.0
PHA03095471 ankyrin-like protein; Provisional 100.0
PHA02917661 ankyrin-like protein; Provisional 100.0
PHA02878477 ankyrin repeat protein; Provisional 100.0
PHA02878477 ankyrin repeat protein; Provisional 100.0
PHA02989494 ankyrin repeat protein; Provisional 100.0
PHA02875413 ankyrin repeat protein; Provisional 100.0
PHA02791284 ankyrin-like protein; Provisional 100.0
KOG4412226 consensus 26S proteasome regulatory complex, subun 100.0
KOG0508615 consensus Ankyrin repeat protein [General function 100.0
KOG4177 1143 consensus Ankyrin [Cell wall/membrane/envelope bio 100.0
PHA02875413 ankyrin repeat protein; Provisional 100.0
KOG4177 1143 consensus Ankyrin [Cell wall/membrane/envelope bio 100.0
PHA02791284 ankyrin-like protein; Provisional 100.0
PHA02989494 ankyrin repeat protein; Provisional 100.0
KOG4412226 consensus 26S proteasome regulatory complex, subun 100.0
PHA02798489 ankyrin-like protein; Provisional 100.0
PHA02798489 ankyrin-like protein; Provisional 100.0
PHA02917661 ankyrin-like protein; Provisional 100.0
PHA02730672 ankyrin-like protein; Provisional 100.0
PHA02792631 ankyrin-like protein; Provisional 100.0
KOG0509 600 consensus Ankyrin repeat and DHHC-type Zn-finger d 100.0
KOG0508615 consensus Ankyrin repeat protein [General function 99.98
PHA02792631 ankyrin-like protein; Provisional 99.97
KOG0509 600 consensus Ankyrin repeat and DHHC-type Zn-finger d 99.97
PHA02859209 ankyrin repeat protein; Provisional 99.95
PHA02859209 ankyrin repeat protein; Provisional 99.95
PHA02795437 ankyrin-like protein; Provisional 99.95
TIGR00870 743 trp transient-receptor-potential calcium channel p 99.94
PHA02795437 ankyrin-like protein; Provisional 99.94
KOG0507 854 consensus CASK-interacting adaptor protein (caskin 99.93
PF13962113 PGG: Domain of unknown function 99.92
KOG4369 2131 consensus RTK signaling protein MASK/UNC-44 [Signa 99.92
KOG0502296 consensus Integral membrane ankyrin-repeat protein 99.92
KOG0502296 consensus Integral membrane ankyrin-repeat protein 99.91
TIGR00870 743 trp transient-receptor-potential calcium channel p 99.91
PLN03192823 Voltage-dependent potassium channel; Provisional 99.91
KOG4369 2131 consensus RTK signaling protein MASK/UNC-44 [Signa 99.91
KOG0505527 consensus Myosin phosphatase, regulatory subunit [ 99.9
KOG0507 854 consensus CASK-interacting adaptor protein (caskin 99.9
PLN03192823 Voltage-dependent potassium channel; Provisional 99.9
KOG0505527 consensus Myosin phosphatase, regulatory subunit [ 99.88
KOG3676 782 consensus Ca2+-permeable cation channel OSM-9 and 99.86
KOG0514452 consensus Ankyrin repeat protein [General function 99.85
KOG0514452 consensus Ankyrin repeat protein [General function 99.85
PHA02743166 Viral ankyrin protein; Provisional 99.84
PHA02741169 hypothetical protein; Provisional 99.84
PHA02741169 hypothetical protein; Provisional 99.83
PHA02884300 ankyrin repeat protein; Provisional 99.83
PHA02884300 ankyrin repeat protein; Provisional 99.82
PHA02743166 Viral ankyrin protein; Provisional 99.82
KOG0512228 consensus Fetal globin-inducing factor (contains a 99.82
PHA02736154 Viral ankyrin protein; Provisional 99.81
PHA02736154 Viral ankyrin protein; Provisional 99.79
KOG0512228 consensus Fetal globin-inducing factor (contains a 99.76
KOG0195448 consensus Integrin-linked kinase [Signal transduct 99.75
KOG0195448 consensus Integrin-linked kinase [Signal transduct 99.71
PF1279689 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 99.7
cd00204126 ANK ankyrin repeats; ankyrin repeats mediate prote 99.68
PF1279689 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 99.68
cd00204126 ANK ankyrin repeats; ankyrin repeats mediate prote 99.68
KOG3676 782 consensus Ca2+-permeable cation channel OSM-9 and 99.67
KOG4214117 consensus Myotrophin and similar proteins [Transcr 99.6
KOG4214117 consensus Myotrophin and similar proteins [Transcr 99.54
COG0666235 Arp FOG: Ankyrin repeat [General function predicti 99.49
COG0666235 Arp FOG: Ankyrin repeat [General function predicti 99.46
PF1363754 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 99.43
KOG0515752 consensus p53-interacting protein 53BP/ASPP, conta 99.43
KOG1710396 consensus MYND Zn-finger and ankyrin repeat protei 99.41
PF1385756 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 99.41
PF1385756 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 99.38
PF1363754 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 99.37
PTZ00322664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.36
KOG1710396 consensus MYND Zn-finger and ankyrin repeat protei 99.36
PTZ00322664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.35
KOG0515752 consensus p53-interacting protein 53BP/ASPP, conta 99.24
KOG07821004 consensus Predicted diacylglycerol kinase [Signal 98.99
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.78
KOG0506622 consensus Glutaminase (contains ankyrin repeat) [A 98.7
KOG0506622 consensus Glutaminase (contains ankyrin repeat) [A 98.66
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.62
KOG0818669 consensus GTPase-activating proteins of the GIT fa 98.61
PF1360630 Ank_3: Ankyrin repeat 98.6
KOG07821004 consensus Predicted diacylglycerol kinase [Signal 98.55
PF1360630 Ank_3: Ankyrin repeat 98.55
KOG0522560 consensus Ankyrin repeat protein [General function 98.53
PF0002333 Ank: Ankyrin repeat Hereditary spherocytosis; Inte 98.52
KOG0522560 consensus Ankyrin repeat protein [General function 98.52
KOG3609 822 consensus Receptor-activated Ca2+-permeable cation 98.51
KOG0818669 consensus GTPase-activating proteins of the GIT fa 98.51
PF0002333 Ank: Ankyrin repeat Hereditary spherocytosis; Inte 98.42
KOG3609 822 consensus Receptor-activated Ca2+-permeable cation 98.4
KOG0705749 consensus GTPase-activating protein Centaurin gamm 98.29
KOG0705749 consensus GTPase-activating protein Centaurin gamm 98.17
KOG0520975 consensus Uncharacterized conserved protein, conta 98.09
KOG0520975 consensus Uncharacterized conserved protein, conta 98.01
KOG0521785 consensus Putative GTPase activating proteins (GAP 97.95
KOG0511516 consensus Ankyrin repeat protein [General function 97.95
KOG0521785 consensus Putative GTPase activating proteins (GAP 97.93
KOG0511516 consensus Ankyrin repeat protein [General function 97.93
KOG2384223 consensus Major histocompatibility complex protein 97.88
KOG2384223 consensus Major histocompatibility complex protein 97.72
smart0024830 ANK ankyrin repeats. Ankyrin repeats are about 33 96.31
smart0024830 ANK ankyrin repeats. Ankyrin repeats are about 33 96.28
KOG2505591 consensus Ankyrin repeat protein [General function 95.87
KOG2505591 consensus Ankyrin repeat protein [General function 95.2
PF03158192 DUF249: Multigene family 530 protein; InterPro: IP 94.98
PF03158192 DUF249: Multigene family 530 protein; InterPro: IP 93.29
PF06128284 Shigella_OspC: Shigella flexneri OspC protein; Int 92.57
PF06128284 Shigella_OspC: Shigella flexneri OspC protein; Int 92.36
PF1192976 DUF3447: Domain of unknown function (DUF3447); Int 90.6
cd07920322 Pumilio Pumilio-family RNA binding domain. Puf rep 89.8
PF1192976 DUF3447: Domain of unknown function (DUF3447); Int 88.66
KOG4591280 consensus Uncharacterized conserved protein, conta 81.5
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=8.3e-46  Score=369.07  Aligned_cols=309  Identities=23%  Similarity=0.227  Sum_probs=280.7

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCcccccccCCCcHHHHH
Q 040056            4 SIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFA   83 (536)
Q Consensus         4 ~~~t~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~A   83 (536)
                      .|+||||.|+..+.++.++.|++.|  ++.+.. +.++.+|+|+|+..|+.++.+.|+++  +.++|..|+.|.||||+|
T Consensus        87 ~~n~~l~~a~~~~~~~~i~~Lls~g--ad~~~~-n~~~~aplh~A~~~~~~s~L~~Ll~~--~~dvnl~de~~~TpLh~A  161 (929)
T KOG0510|consen   87 ADNTPLHAAVEYNQGDKIQVLLSYG--ADTPLR-NLNKNAPLHLAADSGNYSCLKLLLDY--GADVNLEDENGFTPLHLA  161 (929)
T ss_pred             ccCchhHHHhhcchHHHHHHHHhcC--CCCChh-hhhccCchhhccccchHHHHHHHHHh--cCCccccccCCCchhhHH
Confidence            5889999999999999999999999  777766 88999999999999999999999999  899999999999999999


Q ss_pred             HHcCCHHHHHHHHhcCCCcccCCCCCCCcHHHHHHHcCCHHHHHHhhhc-----Cc-ccccccchhhHHHHHHhcCchHH
Q 040056           84 AAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHR-----SK-KELTTEDRKVIFITSVDTGLYDL  157 (536)
Q Consensus        84 ~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-----~~-~~~~~~~g~t~L~~a~~~~~~~~  157 (536)
                      |..++.|..+.|++.|++. ...|.+|.+|+|.|++.|..++.+..+.+     .. ++.-+..+.+|||.|++.|+.++
T Consensus       162 ~~~~~~E~~k~Li~~~a~~-~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~  240 (929)
T KOG0510|consen  162 ARKNKVEAKKELINKGADP-CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEM  240 (929)
T ss_pred             HhcChHHHHHHHHhcCCCC-CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHH
Confidence            9999999889999999995 89999999999999999999999999982     22 77789999999999999999999


Q ss_pred             HHHHHHhCh--------------hhhhccccCcCcHHHHHhcCCCCCCccccchhhhhhhhhhhhHhHHHHHHHHHHHHh
Q 040056          158 ALKLLKSDR--------------QLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWREIV  223 (536)
Q Consensus       158 ~~~ll~~~~--------------~~~~~~d~~g~t~Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~  223 (536)
                      ++..|+...              ..++..|.+|.||||+|+++|                       ..+.++.|+..|+
T Consensus       241 lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G-----------------------~~~svd~Ll~~Ga  297 (929)
T KOG0510|consen  241 LKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQG-----------------------GPESVDNLLGFGA  297 (929)
T ss_pred             HHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcC-----------------------ChhHHHHHHHcCC
Confidence            999998832              244567899999999999999                       6999999999999


Q ss_pred             cCCcHHHHHhhcCCChHHHHHHHcChHHHHHHHHH-hCCCcccccccCCChhHHHHHHcCChHHHHHHHhcCcchhhhhc
Q 040056          224 RQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIG-SYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLAT  302 (536)
Q Consensus       224 ~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~  302 (536)
                      +++.     ++.++.||||.||..|+.++++.|++ .+..+.+..|..|+||||+|+++|+.++++.|++.|+.... ..
T Consensus       298 ~I~~-----kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~-~~  371 (929)
T KOG0510|consen  298 SINS-----KNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN-MS  371 (929)
T ss_pred             cccc-----cCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc-cc
Confidence            9998     44667999999999999999999999 66667899999999999999999999999999999998752 11


Q ss_pred             cccCCCCcHhHHHhhCCCCCCcccccchHHhhHHHHHHHHHhHhhcCCccccccCCCCCCchhh
Q 040056          303 YLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPREL  366 (536)
Q Consensus       303 ~~d~~G~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~n~~g~tpl~~  366 (536)
                      ..|.+|+||||+|+.+|+..+++.|                   +.+|+++..+|+.|++++|+
T Consensus       372 e~D~dg~TaLH~Aa~~g~~~av~~L-------------------i~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  372 EADSDGNTALHLAAKYGNTSAVQKL-------------------ISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             ccccCCchhhhHHHHhccHHHHHHH-------------------HHcCCceeeccccccccccc
Confidence            4599999999999999999988887                   77888888889988888873

>PHA02946 ankyin-like protein; Provisional Back     alignment and domain information
>PHA02876 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02876 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02946 ankyin-like protein; Provisional Back     alignment and domain information
>PHA02874 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02716 CPXV016; CPX019; EVM010; Provisional Back     alignment and domain information
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA03095 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02716 CPXV016; CPX019; EVM010; Provisional Back     alignment and domain information
>PHA02730 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02874 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA03100 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA03100 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA03095 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02917 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02878 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02878 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02989 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02875 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02791 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0508 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PHA02875 ankyrin repeat protein; Provisional Back     alignment and domain information
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PHA02791 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02989 ankyrin repeat protein; Provisional Back     alignment and domain information
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02798 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02798 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02917 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02730 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02792 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>KOG0508 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02792 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>PHA02859 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02859 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02795 ankyrin-like protein; Provisional Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>PHA02795 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] Back     alignment and domain information
>PF13962 PGG: Domain of unknown function Back     alignment and domain information
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] Back     alignment and domain information
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] Back     alignment and domain information
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] Back     alignment and domain information
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0514 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0514 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02743 Viral ankyrin protein; Provisional Back     alignment and domain information
>PHA02741 hypothetical protein; Provisional Back     alignment and domain information
>PHA02741 hypothetical protein; Provisional Back     alignment and domain information
>PHA02884 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02884 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02743 Viral ankyrin protein; Provisional Back     alignment and domain information
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] Back     alignment and domain information
>PHA02736 Viral ankyrin protein; Provisional Back     alignment and domain information
>PHA02736 Viral ankyrin protein; Provisional Back     alignment and domain information
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] Back     alignment and domain information
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG4214 consensus Myotrophin and similar proteins [Transcription] Back     alignment and domain information
>KOG4214 consensus Myotrophin and similar proteins [Transcription] Back     alignment and domain information
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A Back     alignment and domain information
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A Back     alignment and domain information
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A Back     alignment and domain information
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] Back     alignment and domain information
>PF13606 Ank_3: Ankyrin repeat Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF13606 Ank_3: Ankyrin repeat Back     alignment and domain information
>KOG0522 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature Back     alignment and domain information
>KOG0522 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] Back     alignment and domain information
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] Back     alignment and domain information
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] Back     alignment and domain information
>smart00248 ANK ankyrin repeats Back     alignment and domain information
>smart00248 ANK ankyrin repeats Back     alignment and domain information
>KOG2505 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG2505 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses Back     alignment and domain information
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses Back     alignment and domain information
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC Back     alignment and domain information
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC Back     alignment and domain information
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>cd07920 Pumilio Pumilio-family RNA binding domain Back     alignment and domain information
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query536
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 1e-08
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 2e-07
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 3e-07
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 1e-05
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 4e-05
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 1e-07
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 3e-07
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 9e-07
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 2e-06
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 2e-05
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 4e-05
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 6e-06
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 8e-06
3deo_A183 Signal recognition particle 43 kDa protein; chloro 9e-06
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 9e-06
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 1e-05
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 2e-04
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 1e-05
1sw6_A327 Regulatory protein SWI6; transcription regulation, 2e-05
1sw6_A327 Regulatory protein SWI6; transcription regulation, 4e-04
2pnn_A273 Transient receptor potential cation channel subfa 2e-05
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 4e-05
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 3e-04
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 7e-05
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 9e-05
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 1e-04
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 1e-04
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 2e-04
2rfa_A232 Transient receptor potential cation channel subfa 2e-04
2rfa_A232 Transient receptor potential cation channel subfa 3e-04
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 2e-04
3hra_A201 Ankyrin repeat family protein; structural protein; 3e-04
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 4e-04
3v30_A172 DNA-binding protein rfxank; structural genomics co 4e-04
2etb_A256 Transient receptor potential cation channel subfam 4e-04
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 4e-04
3jxi_A260 Vanilloid receptor-related osmotically activated p 5e-04
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 8e-04
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 9e-04
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
 Score = 56.0 bits (136), Expect = 1e-08
 Identities = 71/398 (17%), Positives = 126/398 (31%), Gaps = 111/398 (27%)

Query: 9   LYKASLKGEMKEIEGLLE---------KDYRSILCAAITDGHE----------------- 42
           L+ AS  G +  ++ LL+             + L  A   GH                  
Sbjct: 18  LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 77

Query: 43  ----TVLHVATGAKRTSFVQQLLNFM-DPEDLILQDENGNTAFCFAAAAGAVDIANLMLK 97
               T LH A     T+ V+ LL    +P    L    G+T    AA  G V+    +L+
Sbjct: 78  KDDQTPLHCAARIGHTNMVKLLLENNANPN---LATTAGHTPLHIAAREGHVETVLALLE 134

Query: 98  KNPSLLGIRGSKNMPPLYFAALFGQTDTASFL-FHRSKKELTTEDRKVIFITSVDTGLYD 156
           K  S       K   PL+ AA +G+   A  L    +      ++       +V     D
Sbjct: 135 KEASQ-ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLD 193

Query: 157 LALKLLKSDRQLALTHHVQHG-----------TALHMLARNPSPFADTVLGIMKCSRNIE 205
           +  KLL           +  G           T LH+ A+                    
Sbjct: 194 IV-KLL-----------LPRGGSPHSPAWNGYTPLHIAAKQ------------------- 222

Query: 206 LMNNQALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVH 265
             N   +E+ + L   +  Q          +    L  AA+ G+ + +A L+    +  +
Sbjct: 223 --NQ--VEVARSL---L--QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GN 272

Query: 266 ELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYR 325
             +++G +  H+     H+ + +++ + G             G   LH+A+ Y  +    
Sbjct: 273 LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA----TTRMGYTPLHVASHYGNIK--- 325

Query: 326 TVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTP 363
            V         + L+  + +          K   G +P
Sbjct: 326 LV---------KFLLQHQAD-------VNAKTKLGYSP 347
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query536
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 100.0
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 100.0
4g8k_A337 2-5A-dependent ribonuclease; ankyrin-repeat domain 100.0
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 100.0
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 100.0
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 100.0
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 100.0
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 100.0
4g8k_A337 2-5A-dependent ribonuclease; ankyrin-repeat domain 100.0
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 100.0
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 100.0
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 100.0
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 100.0
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 100.0
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 100.0
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 100.0
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 100.0
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 100.0
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 100.0
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 100.0
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 100.0
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 100.0
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 100.0
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 100.0
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 100.0
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 100.0
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 100.0
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 100.0
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 100.0
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 100.0
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 100.0
4b93_B269 Ankyrin repeat domain-containing protein 27; endoc 100.0
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 100.0
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 100.0
4b93_B269 Ankyrin repeat domain-containing protein 27; endoc 100.0
1sw6_A327 Regulatory protein SWI6; transcription regulation, 100.0
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 100.0
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 100.0
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 100.0
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 100.0
2rfa_A232 Transient receptor potential cation channel subfa 100.0
3hra_A201 Ankyrin repeat family protein; structural protein; 100.0
1sw6_A327 Regulatory protein SWI6; transcription regulation, 100.0
2rfa_A232 Transient receptor potential cation channel subfa 100.0
3hra_A201 Ankyrin repeat family protein; structural protein; 100.0
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 100.0
2etb_A256 Transient receptor potential cation channel subfam 99.97
2etb_A256 Transient receptor potential cation channel subfam 99.97
4gpm_A169 Engineered protein OR264; de novo protein, structu 99.97
2pnn_A273 Transient receptor potential cation channel subfa 99.97
3jxi_A260 Vanilloid receptor-related osmotically activated p 99.97
2pnn_A273 Transient receptor potential cation channel subfa 99.97
4gpm_A169 Engineered protein OR264; de novo protein, structu 99.97
3jxi_A260 Vanilloid receptor-related osmotically activated p 99.97
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 99.97
3v30_A172 DNA-binding protein rfxank; structural genomics co 99.97
3v31_A167 Ankyrin repeat family A protein 2; structural geno 99.96
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 99.96
4hbd_A276 KN motif and ankyrin repeat domain-containing Pro; 99.96
4hbd_A276 KN motif and ankyrin repeat domain-containing Pro; 99.96
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 99.96
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 99.96
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 99.96
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 99.96
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 99.95
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 99.95
1awc_B153 Protein (GA binding protein beta 1); complex (tran 99.95
3v30_A172 DNA-binding protein rfxank; structural genomics co 99.95
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 99.95
3v31_A167 Ankyrin repeat family A protein 2; structural geno 99.95
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 99.95
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 99.95
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 99.95
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 99.94
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 99.94
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 99.94
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 99.94
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 99.94
1awc_B153 Protein (GA binding protein beta 1); complex (tran 99.94
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 99.94
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 99.93
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 99.92
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 99.92
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 99.92
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 99.91
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 99.91
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 99.91
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 99.9
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 99.89
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 99.89
3deo_A183 Signal recognition particle 43 kDa protein; chloro 99.89
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 99.89
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 99.88
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 99.88
3deo_A183 Signal recognition particle 43 kDa protein; chloro 99.88
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 99.88
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 99.87
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 99.87
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 99.87
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 99.87
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 99.85
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 99.85
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 99.84
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 99.84
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 99.84
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 99.83
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 99.82
3lvq_E497 ARF-GAP with SH3 domain, ANK repeat and PH domain 99.82
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 99.81
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 99.8
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 99.78
3lvq_E497 ARF-GAP with SH3 domain, ANK repeat and PH domain 99.78
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 99.74
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 99.69
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
Probab=100.00  E-value=2.5e-50  Score=414.19  Aligned_cols=332  Identities=19%  Similarity=0.189  Sum_probs=255.4

Q ss_pred             ccccHHHHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCcccccccCCCcHHHH
Q 040056            3 FSIRLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCF   82 (536)
Q Consensus         3 ~~~~t~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~   82 (536)
                      ..|.||||.|+..|+.+++++|++.+  .+++.+ +.+|.||||+|+..|+.++|++|+++  +++++.+|..|.||||+
T Consensus        45 ~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~~  119 (437)
T 1n11_A           45 VKVETPLHMAARAGHTEVAKYLLQNK--AKVNAK-AKDDQTPLHCAARIGHTNMVKLLLEN--NANPNLATTAGHTPLHI  119 (437)
T ss_dssp             SCCCCHHHHHHHHTCHHHHHHHHHHT--CCSSCC-CTTSCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTCCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHhC--CCCCCCCCCCCCcHHHH
Confidence            46889999999999999999999998  778776 88999999999999999999999999  88899999999999999


Q ss_pred             HHHcCCHHHHHHHHhcCCCcccCCCCCCCcHHHHHHHcCCHHHHHHhhhcCc-ccccccchhhHHHHHHhcCchHHHHHH
Q 040056           83 AAAAGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHRSK-KELTTEDRKVIFITSVDTGLYDLALKL  161 (536)
Q Consensus        83 A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~g~t~L~~a~~~~~~~~~~~l  161 (536)
                      |+..|+.+++++|++++++. ...+..|.||||+|+..|+.+++++|+++++ ++..+..|.||||.|+..|+.+++++|
T Consensus       120 A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  198 (437)
T 1n11_A          120 AAREGHVETVLALLEKEASQ-ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL  198 (437)
T ss_dssp             HHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHhCCCCC-cCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            99999999999999998885 7778889999999999999999999999888 777888899999999999999999998


Q ss_pred             HHhChhhhhccccCcCcHHHHHhcCCCCCC-ccccc-----hhhhhhhhhhhhHh----HHHHHHHHHHHHhcCCcHHHH
Q 040056          162 LKSDRQLALTHHVQHGTALHMLARNPSPFA-DTVLG-----IMKCSRNIELMNNQ----ALELVKCLWREIVRQEDVDVA  231 (536)
Q Consensus       162 l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~----~~~~~~~L~~~~~~~~~~~~~  231 (536)
                      ++. +..++..+.+|.||||+|+..++... ...+.     ..++....+++|..    ..+++++|++++.+.+.    
T Consensus       199 l~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----  273 (437)
T 1n11_A          199 LPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL----  273 (437)
T ss_dssp             GGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC----
T ss_pred             HhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC----
Confidence            887 55666778888888888888874110 00000     01111222333322    35666666666665554    


Q ss_pred             HhhcCCChHHHHHHHcChHHHHHHHHHhCCCcccccccCCChhHHHHHHcCChHHHHHHHhcCcchhhhhccccCCCCcH
Q 040056          232 EAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHRHMNIFNLIYEQGFNKQLLATYLDSCGNNI  311 (536)
Q Consensus       232 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~~~~d~~G~Tp  311 (536)
                       .+..|.||||+|++.|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++++|+++|++++    .+|..|+||
T Consensus       274 -~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n----~~~~~g~t~  347 (437)
T 1n11_A          274 -GNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN----AKTKLGYSP  347 (437)
T ss_dssp             -CCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT----CCCTTSCCH
T ss_pred             -CCCCCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCC----CCCCCCCCH
Confidence             345567777777777777777777777766 66777777777777777777777777777776655    467777777


Q ss_pred             hHHHhhCCCCCCcccccchHHhhHHHHHHHHHhHhhcCCccccccCCCCCCchhhhHHH
Q 040056          312 LHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKTPRELFTVE  370 (536)
Q Consensus       312 Lh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~n~~g~tpl~~a~~~  370 (536)
                      ||+|+..|+.+++++|                   +..|++++.+|.+|+||+++|.+.
T Consensus       348 L~~A~~~g~~~iv~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~  387 (437)
T 1n11_A          348 LHQAAQQGHTDIVTLL-------------------LKNGASPNEVSSDGTTPLAIAKRL  387 (437)
T ss_dssp             HHHHHHTTCHHHHHHH-------------------HHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred             HHHHHHCChHHHHHHH-------------------HHCcCCCCCCCCCCCCHHHHHHHc
Confidence            7777777776666665                   556777888888888888887654
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Back     alignment and structure
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Back     alignment and structure
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Back     alignment and structure
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Back     alignment and structure
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Back     alignment and structure
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Back     alignment and structure
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} Back     alignment and structure
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 536
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 2e-09
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 9e-08
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 3e-07
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 1e-05
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 3e-05
d1oy3d_255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 1e-08
d1oy3d_255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 4e-04
d1s70b_291 d.211.1.1 (B:) Myosin phosphatase targeting subuni 4e-08
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 7e-08
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 4e-04
d1wdya_285 d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas 1e-06
d1wdya_285 d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas 1e-04
d1k1aa_228 d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 6e-06
d1sw6a_301 d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker 7e-06
d1ixva_229 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 2e-05
d1ixva_229 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 3e-04
d2ajaa1346 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 3e-05
d2ajaa1346 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 5e-05
d2ajaa1346 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 0.003
d1uoha_223 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 4e-04
d1uoha_223 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 7e-04
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (137), Expect = 2e-09
 Identities = 46/277 (16%), Positives = 83/277 (29%), Gaps = 38/277 (13%)

Query: 43  TVLHVATGAKRTSFVQQLLNF-MDPEDLILQDENGNTAFCFAAAAGAVDIANLMLKKNPS 101
           T LHVA+       V+ LL     P    + +    T    AA AG  ++A  +L+    
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPN---VSNVKVETPLHMAARAGHTEVAKYLLQNKAK 58

Query: 102 LLGIRGSKNMPPLYFAALFGQTDTASFLFHRSKKELTTEDRKVIFITSVDTGLYDLALKL 161
            +  +   +  PL+ AA  G T+    L   +                            
Sbjct: 59  -VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLA---------------------- 95

Query: 162 LKSDRQLALTHHVQHGTALHMLARNPSPFADTVLGIMKCSRNIELMNNQALELVKCLWRE 221
             +     L    + G    +LA      +   +     +          + + + L   
Sbjct: 96  -TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL-- 152

Query: 222 IVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILH 281
              + D     A +     L  A    N+  + +L+       H    NG +  H+A   
Sbjct: 153 ---ERDAHPNAAGKNGLTPLHVAVHHNNLD-IVKLLLPRGGSPHSPAWNGYTPLHIAAKQ 208

Query: 282 RHMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKY 318
             + +   + + G +           G   LHLAA+ 
Sbjct: 209 NQVEVARSLLQYGGSAN----AESVQGVTPLHLAAQE 241
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228 Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query536
d1n11a_408 Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1n11a_408 Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1oy3d_255 Transcription factor inhibitor I-kappa-B-beta, IKB 100.0
d1wdya_285 RNase L, 2-5a-dependent ribonuclease {Human (Homo 100.0
d1uoha_223 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d2fo1e1277 Lin-12 {Caenorhabditis elegans [TaxId: 6239]} 100.0
d1oy3d_255 Transcription factor inhibitor I-kappa-B-beta, IKB 100.0
d1uoha_223 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d1ixva_229 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d1wdya_285 RNase L, 2-5a-dependent ribonuclease {Human (Homo 100.0
d2fo1e1277 Lin-12 {Caenorhabditis elegans [TaxId: 6239]} 100.0
d1s70b_291 Myosin phosphatase targeting subunit 1, MYPT1 {Chi 100.0
d1ixva_229 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d1s70b_291 Myosin phosphatase targeting subunit 1, MYPT1 {Chi 100.0
d1k1aa_228 bcl-3 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1iknd_221 I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 99.97
d1k1aa_228 bcl-3 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1ot8a_209 Neurogenic locus notch receptor domain {Fruit fly 99.96
d1ot8a_209 Neurogenic locus notch receptor domain {Fruit fly 99.96
d1iknd_221 I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 99.96
d2ajaa1346 Hypothetical protein LPG2416 {Legionella pneumophi 99.95
d2ajaa1346 Hypothetical protein LPG2416 {Legionella pneumophi 99.94
d1bd8a_156 Cell cycle inhibitor p19ink4D {Human (Homo sapiens 99.93
d1ihba_156 p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] 99.93
d1ihba_156 p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] 99.93
d1sw6a_301 Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch 99.92
d1awcb_153 GA bindinig protein (GABP) beta 1 {Mouse (Mus musc 99.92
d1bd8a_156 Cell cycle inhibitor p19ink4D {Human (Homo sapiens 99.91
d1awcb_153 GA bindinig protein (GABP) beta 1 {Mouse (Mus musc 99.9
d1bi7b_125 Cell cycle inhibitor p16ink4A {Human (Homo sapiens 99.9
d1myoa_118 Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] 99.89
d1sw6a_301 Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch 99.89
d1ycsb1130 53BP2 {Human (Homo sapiens) [TaxId: 9606]} 99.89
d1bi7b_125 Cell cycle inhibitor p16ink4A {Human (Homo sapiens 99.87
d1myoa_118 Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] 99.87
d1dcqa1154 Pyk2-associated protein beta {Mouse (Mus musculus) 99.87
d1ycsb1130 53BP2 {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1dcqa1154 Pyk2-associated protein beta {Mouse (Mus musculus) 99.81
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-45  Score=369.73  Aligned_cols=335  Identities=18%  Similarity=0.169  Sum_probs=285.0

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcCccchhhhcCCCCCcHHHHHHhcCCHHHHHHHHhcCCCCcccccccCCCcHHHHHHH
Q 040056            6 RLLLYKASLKGEMKEIEGLLEKDYRSILCAAITDGHETVLHVATGAKRTSFVQQLLNFMDPEDLILQDENGNTAFCFAAA   85 (536)
Q Consensus         6 ~t~L~~Aa~~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~A~~   85 (536)
                      .||||.||..|+.++|+.|+++|  .+++.. |..|+||||+|+..|+.++|++|+++  |++++.+|.+|.||||+|+.
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g--~~in~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~--gadi~~~~~~g~t~L~~A~~   75 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRG--ASPNVS-NVKVETPLHMAARAGHTEVAKYLLQN--KAKVNAKAKDDQTPLHCAAR   75 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTT--CCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHH--TCCSSCCCTTSCCHHHHHHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHH
Confidence            48999999999999999999998  788877 99999999999999999999999999  89999999999999999999


Q ss_pred             cCCHHHHHHHHhcCCCc--------------------------------ccCCCCCCCcHHHHHHHcCCHHHHHHhhhcC
Q 040056           86 AGAVDIANLMLKKNPSL--------------------------------LGIRGSKNMPPLYFAALFGQTDTASFLFHRS  133 (536)
Q Consensus        86 ~g~~~iv~~Ll~~~~~~--------------------------------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~  133 (536)
                      .|+.+++++|++.+++.                                ....+.++.++++.|+..++.+++++|++++
T Consensus        76 ~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~  155 (408)
T d1n11a_          76 IGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD  155 (408)
T ss_dssp             HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcC
Confidence            99999999999765432                                1345778899999999999999999999999


Q ss_pred             c-ccccccchhhHHHHHHhcCchHHHHHHHHhChhhhhccccCcCcHHHHHhcCCCCCC------ccccchhhhhhhhhh
Q 040056          134 K-KELTTEDRKVIFITSVDTGLYDLALKLLKSDRQLALTHHVQHGTALHMLARNPSPFA------DTVLGIMKCSRNIEL  206 (536)
Q Consensus       134 ~-~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~------~~~~~~~~~~~~~~~  206 (536)
                      . ++..+.+|.+|||+|+..|+.++++.|+++ +.+++..+..|.||+|.+........      .............++
T Consensus       156 ~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~  234 (408)
T d1n11a_         156 AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP  234 (408)
T ss_dssp             CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred             CCCCcCCCcCchHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCH
Confidence            8 888899999999999999999999999988 66778889999999999887764111      000001111222222


Q ss_pred             hhH----hHHHHHHHHHHHHhcCCcHHHHHhhcCCChHHHHHHHcChHHHHHHHHHhCCCcccccccCCChhHHHHHHcC
Q 040056          207 MNN----QALELVKCLWREIVRQEDVDVAEAIRKPTNLLFDAAKVGNIQFLAELIGSYPDLVHELDENGRSIFHVAILHR  282 (536)
Q Consensus       207 ~~~----~~~~~~~~L~~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~  282 (536)
                      ++.    ...++++.+.+.+...+.     .+..|.||++.|++.++.+++++|++++++ ++..+..+.||||.|+..+
T Consensus       235 l~~a~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~-~~~~~~~~~t~L~~~~~~~  308 (408)
T d1n11a_         235 LHLAAQEGHAEMVALLLSKQANGNL-----GNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYG  308 (408)
T ss_dssp             HHHHHHTTCHHHHHHHHTTTCCTTC-----CCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSS
T ss_pred             HHHHHHhCcHhHhhhhhcccccccc-----ccCCCCChhhhhhhcCcHHHHHHHHHCCCc-cccccccccccchhhcccC
Confidence            222    136677777766665554     456779999999999999999999999999 8899999999999999999


Q ss_pred             ChHHHHHHHhcCcchhhhhccccCCCCcHhHHHhhCCCCCCcccccchHHhhHHHHHHHHHhHhhcCCccccccCCCCCC
Q 040056          283 HMNIFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYPTLSPYRTVSGAALEMQRELLIYKEVEMIVQPSYKEMKNYDGKT  362 (536)
Q Consensus       283 ~~~iv~~Ll~~~~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~n~~g~t  362 (536)
                      +.++++++++.|++++    .+|.+|+||||+|++.|+.+++++|                   +..|++++.+|++|+|
T Consensus       309 ~~~~~~~ll~~g~~in----~~d~~G~T~Lh~A~~~g~~~iv~~L-------------------l~~GAd~n~~d~~G~t  365 (408)
T d1n11a_         309 NIKLVKFLLQHQADVN----AKTKLGYSPLHQAAQQGHTDIVTLL-------------------LKNGASPNEVSSDGTT  365 (408)
T ss_dssp             CSHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCSCCCCSSSCC
T ss_pred             cceeeeeecccccccc----ccCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCCCC
Confidence            9999999999998876    6999999999999999999988888                   7789999999999999


Q ss_pred             chhhhHHH-hHHHH
Q 040056          363 PRELFTVE-HLELL  375 (536)
Q Consensus       363 pl~~a~~~-~~~~~  375 (536)
                      |+++|.+. +.+++
T Consensus       366 ~L~~A~~~~~~~iv  379 (408)
T d1n11a_         366 PLAIAKRLGYISVT  379 (408)
T ss_dssp             HHHHHHHTTCHHHH
T ss_pred             HHHHHHHcCCHHHH
Confidence            99999875 44444
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure