Citrus Sinensis ID: 040132

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MSMKFLGIQIAVAIYIYVLTLTRKINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQLSRARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTTYLRFGPVTEH
ccHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEccccccccccccEEEEcccccccccccccccccccccEEEEccccccHHHHHHcccccccEEEEccccccccccccEEEEEcccccc
ccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccEEccccccccEEEEEEEEccccccEEEEEEccccEEEEEccccHHHcccccccccccccccccccccccHHccccccccccEEEEEEEcccccccEEEEEEEEEEcccccccEEEccEEEEEccccccccccccccccccccEEEEcccccccHHHHcHHHccccEEEEEcccccccccccEEEEEcccccc
MSMKFLGIQIAVAIYIYVLTLTRKINgfrieltprtsidsalfpkdlspeeIHHRIAQLSRARALqlgskqepetlkppvypspfantniYITKIsigstqfspylvvdtgsddrwlqcegctscfpikggsfpvkesktyrglacdhplcvpklcskglcsydwkykegseikgvlssesftfpgdkntsltfanvtfgcgydnqnvsfggymgsdniIAGVFGLRAGQRSILrqlepetnvrfsyclrlypttdgsnttylrfgpvteh
MSMKFLGIQIAVAIYIYVLTLTRKINGFRIeltprtsidsalfpkDLSPEEIHHRIAQLSRARALQLgskqepetlkppvypsPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRqlepetnvrFSYCLRlypttdgsnttylrfgpvteh
MSMKFLGIQIAVAIYIYVLTLTRKINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQLSRARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTTYLRFGPVTEH
****FLGIQIAVAIYIYVLTLTRKINGFRIELTPRTSIDSALF*************************************YPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTTYLRF******
***KFLGIQIAVAIYIYVLTLTRKINGFRIELTPRT***********************************************PFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKG**F****SK*****ACD*PLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYP***********FGP****
MSMKFLGIQIAVAIYIYVLTLTRKINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQLSRARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTTYLRFGPVTEH
MSMKFLGIQIAVAIYIYVLTLTRKINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQLSRARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTT**********
iiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSMKFLGIQIAVAIYIYVLTLTRKINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQLSRARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTTYLRFGPVTEH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query271 2.2.26 [Sep-21-2011]
Q766C3 437 Aspartic proteinase nepen N/A no 0.741 0.459 0.317 4e-19
Q766C2 438 Aspartic proteinase nepen N/A no 0.756 0.468 0.311 5e-19
Q9LS40 500 Protein ASPARTIC PROTEASE no no 0.501 0.272 0.328 1e-15
Q3EBM5 447 Probable aspartic proteas no no 0.612 0.371 0.314 2e-14
Q6XBF8 437 Aspartic proteinase CDR1 no no 0.808 0.501 0.262 4e-14
Q9LHE3 470 Protein ASPARTIC PROTEASE no no 0.538 0.310 0.327 2e-13
Q9S9K4 475 Aspartic proteinase-like no no 0.564 0.322 0.308 3e-11
Q9LZL3 453 Aspartic proteinase PCS1 no no 0.468 0.280 0.292 6e-08
A2ZC67 410 Aspartic proteinase Asp1 N/A no 0.501 0.331 0.292 2e-07
Q0IU52 410 Aspartic proteinase Asp1 no no 0.501 0.331 0.292 6e-07
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function desciption
 Score = 95.1 bits (235), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 29/230 (12%)

Query: 24  KINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQLSRARALQLGSK-QEPETLKPPVYP 82
           K+ GF+I L     +DS    K+L+  ++  R  +    R  +L +    P  ++  VY 
Sbjct: 37  KVTGFQIMLE---HVDSG---KNLTKFQLLERAIERGSRRLQRLEAMLNGPSGVETSVY- 89

Query: 83  SPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYR 142
              A    Y+  +SIG+       ++DTGSD  W QC+ CT CF      F  + S ++ 
Sbjct: 90  ---AGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFS 146

Query: 143 GLACDHPLC---VPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTF 199
            L C   LC       CS   C Y + Y +GSE +G + +E+ TF      S++  N+TF
Sbjct: 147 TLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTF-----GSVSIPNITF 201

Query: 200 GCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCL 249
           GCG +NQ   FG   G     AG+ G+  G  S+  QL+     +FSYC+
Sbjct: 202 GCGENNQ--GFGQGNG-----AGLVGMGRGPLSLPSQLDV---TKFSYCM 241
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
224114179 449 predicted protein [Populus trichocarpa] 0.852 0.514 0.314 8e-31
449454654 434 PREDICTED: probable aspartic protease At 0.856 0.534 0.310 6e-22
449454652 435 PREDICTED: probable aspartic protease At 0.822 0.512 0.321 8e-22
356525748 436 PREDICTED: probable aspartic protease At 0.878 0.545 0.308 3e-21
356557014 435 PREDICTED: probable aspartic protease At 0.837 0.521 0.316 4e-21
449499012 435 PREDICTED: probable aspartic protease At 0.822 0.512 0.317 5e-21
255563741 448 Aspartic proteinase nepenthesin-2 precur 0.889 0.537 0.330 4e-20
356528671 440 PREDICTED: probable aspartic protease At 0.852 0.525 0.280 8e-20
224126551 440 predicted protein [Populus trichocarpa] 0.852 0.525 0.296 7e-19
147811402 440 hypothetical protein VITISV_006732 [Viti 0.915 0.563 0.289 1e-18
>gi|224114179|ref|XP_002332420.1| predicted protein [Populus trichocarpa] gi|222832373|gb|EEE70850.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 143/270 (52%), Gaps = 39/270 (14%)

Query: 22  TRKINGFRIELTPRTSIDSALFPKDLSPEE------------IHHRIAQLSRARALQLGS 69
           T +++G  +EL  + S  S L+P +L P E            +HH+ + +S  +A+ +  
Sbjct: 8   TMQLDGLTMELIHKDSPQSPLYPGNLPPGEQILQPAACPFAGLHHQTSMMSTNKAV-MNR 66

Query: 70  KQEPETLKPPVYPSPFANTNIYITKISIGS-------TQFSPY-LVVDTGSDDRWLQCEG 121
              P T     Y  PF    +++ ++ +GS       T F  Y   +DTG++  W+QCEG
Sbjct: 67  MMSPLT----SYGDPF----LFLAQVGVGSFQEKSHRTHFKTYYFQIDTGNELSWIQCEG 118

Query: 122 CTS----CFPIKGGSFPVKESKTYRGLACD-HPLCVPKLCSKGLCSYDWKYKEGSEIKGV 176
           C +    CFP K   +   +SK+Y+ ++C+ H  C P  C +GLC+Y+  Y  GS   G 
Sbjct: 119 CQNKGNMCFPHKDPPYTSSQSKSYKPVSCNQHSFCEPNQCKEGLCAYNVTYGPGSYTSGN 178

Query: 177 LSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQ 236
           L++E+FTF  +        +++FGC  D++N+ +  ++   N ++GV G+  G RS L Q
Sbjct: 179 LANETFTFYSNHGKHTALKSISFGCSTDSRNMIY-AFLLDKNPVSGVLGMGWGPRSFLAQ 237

Query: 237 LEPETNVRFSYCLRLYPTTDGSNTTYLRFG 266
           L   ++ +FSYC+    T + ++ TYLRFG
Sbjct: 238 LGSISHGKFSYCI----TANNTHNTYLRFG 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449454654|ref|XP_004145069.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449470632|ref|XP_004153020.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449499016|ref|XP_004160697.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449454652|ref|XP_004145068.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449470630|ref|XP_004153019.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356525748|ref|XP_003531485.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|356557014|ref|XP_003546813.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|449499012|ref|XP_004160696.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255563741|ref|XP_002522872.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] gi|223537956|gb|EEF39570.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356528671|ref|XP_003532923.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|224126551|ref|XP_002329582.1| predicted protein [Populus trichocarpa] gi|222870291|gb|EEF07422.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147811402|emb|CAN61225.1| hypothetical protein VITISV_006732 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
TAIR|locus:2206184 445 AT1G31450 [Arabidopsis thalian 0.918 0.559 0.286 3.1e-24
TAIR|locus:2056916 461 AT2G03200 [Arabidopsis thalian 0.708 0.416 0.314 1.1e-21
TAIR|locus:2010786 431 AT1G64830 [Arabidopsis thalian 0.845 0.531 0.295 1.8e-21
TAIR|locus:2095042 500 ASPG1 "ASPARTIC PROTEASE IN GU 0.612 0.332 0.336 8.9e-21
TAIR|locus:2183715 464 AT5G10760 [Arabidopsis thalian 0.594 0.346 0.370 1.5e-20
TAIR|locus:504955954 447 AT2G35615 [Arabidopsis thalian 0.612 0.371 0.314 2.8e-20
TAIR|locus:2145954 437 CDR1 "CONSTITUTIVE DISEASE RES 0.837 0.519 0.287 5.4e-20
TAIR|locus:2095365 470 AT3G20015 [Arabidopsis thalian 0.590 0.340 0.329 3.3e-19
TAIR|locus:2062809 756 AT2G28220 [Arabidopsis thalian 0.608 0.218 0.292 6.8e-18
TAIR|locus:2031225 483 AT1G25510 [Arabidopsis thalian 0.597 0.335 0.320 9.3e-18
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 280 (103.6 bits), Expect = 3.1e-24, P = 3.1e-24
 Identities = 78/272 (28%), Positives = 122/272 (44%)

Query:     1 MSMK-FLGIQIAVAIYIYVLTLTRKINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQL 59
             M+ K FL   +    + +    +       +EL  R S  S L+    +P   HH ++  
Sbjct:     1 MATKTFLYCSLLAISFFFASNSSANRENLTVELIHRDSPHSPLY----NP---HHTVSDR 53

Query:    60 SRARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQC 119
               A  L+  S+    T K  +     +N   Y   ISIG+     + + DTGSD  W+QC
Sbjct:    54 LNAAFLRSISRSRRFTTKTDLQSGLISNGGEYFMSISIGTPPSKVFAIADTGSDLTWVQC 113

Query:   120 EGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVP-----KLC--SKGLCSYDWKYKEGSE 172
             + C  C+      F  K+S TY+  +CD   C       + C  SK +C Y + Y + S 
Sbjct:   114 KPCQQCYKQNSPLFDKKKSSTYKTESCDSKTCQALSEHEEGCDESKDICKYRYSYGDNSF 173

Query:   173 IKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRS 232
              KG +++E+ +      +S++F    FGCGY+N     GG        +G+ GL  G  S
Sbjct:   174 TKGDVATETISIDSSSGSSVSFPGTVFGCGYNN-----GGTFEETG--SGIIGLGGGPLS 226

Query:   233 ILRQLEPETNVRFSYCL-RLYPTTDGSNTTYL 263
             ++ QL      +FSYCL     TT+G++   L
Sbjct:   227 LVSQLGSSIGKKFSYCLSHTAATTNGTSVINL 258
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062809 AT2G28220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.02200008
hypothetical protein (449 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
PLN03146 431 PLN03146, PLN03146, aspartyl protease family prote 2e-30
cd05476 265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-24
cd05472 299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 8e-22
cd05471 283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-17
cd05475 273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-10
cd06096 326 cd06096, Plasmepsin_5, Plasmepsins are a class of 2e-07
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 1e-06
pfam00026 316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-04
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  117 bits (295), Expect = 2e-30
 Identities = 69/271 (25%), Positives = 114/271 (42%), Gaps = 29/271 (10%)

Query: 10  IAVAIYIYVLTLT---RKINGFRIELTPRTSIDSALF-PKDLSPEE----IHHRIAQLSR 61
           +          L+       GF ++L  R S  S  + P +   +         I++++ 
Sbjct: 4   LLALCLFSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNH 63

Query: 62  ARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEG 121
            R         P   +  +      N   Y+  ISIG+       + DTGSD  W QC+ 
Sbjct: 64  FRPTDA----SPNDPQSDLIS----NGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKP 115

Query: 122 CTSCFPIKGGSFPVKESKTYRGLACDHPLC-----VPKLCSKGLCSYDWKYKEGSEIKGV 176
           C  C+      F  K+S TY+ ++CD   C           +  C+Y + Y +GS  KG 
Sbjct: 116 CDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTKGN 175

Query: 177 LSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQ 236
           L+ E+ T        ++F  + FGCG++N   +F      D   +G+ GL  G  S++ Q
Sbjct: 176 LAVETLTIGSTSGRPVSFPGIVFGCGHNN-GGTF------DEKGSGIVGLGGGPLSLISQ 228

Query: 237 LEPETNVRFSYCLRLYPTTDGSNTTYLRFGP 267
           L      +FSYCL +  ++D + T+ + FG 
Sbjct: 229 LGSSIGGKFSYCL-VPLSSDSNGTSKINFGT 258

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 271
PLN03146 431 aspartyl protease family protein; Provisional 100.0
KOG1339 398 consensus Aspartyl protease [Posttranslational mod 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
cd06096 326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
PTZ00165 482 aspartyl protease; Provisional 100.0
cd05478 317 pepsin_A Pepsin A, aspartic protease produced in g 99.97
cd05490 325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 99.97
cd05477 318 gastricsin Gastricsins, asparate proteases produce 99.97
cd05486 316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 99.97
cd06097 278 Aspergillopepsin_like Aspergillopepsin_like, aspar 99.97
PTZ00147 453 plasmepsin-1; Provisional 99.97
cd06098 317 phytepsin Phytepsin, a plant homolog of mammalian 99.96
cd05485 329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 99.96
cd05488 320 Proteinase_A_fungi Fungal Proteinase A , aspartic 99.96
cd05475 273 nucellin_like Nucellins, plant aspartic proteases 99.96
cd05487 326 renin_like Renin stimulates production of angioten 99.96
PTZ00013 450 plasmepsin 4 (PM4); Provisional 99.96
cd05472 299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 99.96
cd05489 362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 99.95
cd05471 283 pepsin_like Pepsin-like aspartic proteases, biloba 99.95
cd05473 364 beta_secretase_like Beta-secretase, aspartic-acid 99.94
cd05476 265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 99.94
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.93
PF00026 317 Asp: Eukaryotic aspartyl protease The Prosite entr 99.92
cd05474 295 SAP_like SAPs, pepsin-like proteinases secreted fr 99.89
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.02
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.02
PF1365090 Asp_protease_2: Aspartyl protease 95.88
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.63
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 90.24
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 86.25
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 82.56
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.8e-49  Score=371.49  Aligned_cols=237  Identities=28%  Similarity=0.540  Sum_probs=200.5

Q ss_pred             hccCcceEEEEecCCCCCCCCCCCCCCcHHHHHHHHHHhHHHHHHhcCCCCCCCCCCCcccCCCCCCceEEEEEeecCCC
Q 040132           22 TRKINGFRIELTPRTSIDSALFPKDLSPEEIHHRIAQLSRARALQLGSKQEPETLKPPVYPSPFANTNIYITKISIGSTQ  101 (271)
Q Consensus        22 ~~~~~~~~~~L~h~~s~~s~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~pl~~~~~~~~~~Y~~~i~iGtP~  101 (271)
                      .++.++++++|+||+++|+|+++++.++.++++++++|+.+|++++.++..   ...|+..+...++++|+++|.|||||
T Consensus        19 ~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Y~v~i~iGTPp   95 (431)
T PLN03146         19 EAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDA---SPNDPQSDLISNGGEYLMNISIGTPP   95 (431)
T ss_pred             cccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccc---cCCccccCcccCCccEEEEEEcCCCC
Confidence            456788999999999999999888888889999999999999999864422   22345444444588999999999999


Q ss_pred             ceeEEEEeCCCCceeeeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCC----CCcCCCC-ceeEEEcCCCceEEEE
Q 040132          102 FSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVP----KLCSKGL-CSYDWKYKEGSEIKGV  176 (271)
Q Consensus       102 q~~~l~~DTGS~~~Wv~c~~C~~C~~~~~~~y~p~~SsT~~~~~C~s~~C~~----~~C~~~~-c~~~~~Y~~Gs~~~G~  176 (271)
                      |++.|++||||+++||+|.+|..|..+.++.|||++|+||+.++|+++.|..    ..|..++ |.|.+.|+||+.+.|.
T Consensus        96 q~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i~Ygdgs~~~G~  175 (431)
T PLN03146         96 VPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTKGN  175 (431)
T ss_pred             ceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEEEeCCCCceeeE
Confidence            9999999999999999999999999888999999999999999999999986    3476655 9999999999888999


Q ss_pred             EEEEEEEecCCCCCceeecceEEEeEEecCCCcccccCCCCCCcceEEecCCCCCChHHhhcccCCCcEEEEecCCCCCC
Q 040132          177 LSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTD  256 (271)
Q Consensus       177 ~~~D~v~~~~~~~~~~~~~~~~FGc~~~~~~~~f~~~~~~~~~~dGIlGLg~~~~S~~~ql~~~~~~~FS~cL~~~~~~~  256 (271)
                      +++|+|+|++..++...++++.|||++.+.+ .|.      ...+||||||++++|+++||...+.++|||||++..++.
T Consensus       176 l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g-~f~------~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~~~~~  248 (431)
T PLN03146        176 LAVETLTIGSTSGRPVSFPGIVFGCGHNNGG-TFD------EKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLSSDS  248 (431)
T ss_pred             EEEEEEEeccCCCCcceeCCEEEeCCCCCCC-Ccc------CCCceeEecCCCCccHHHHhhHhhCCcEEEECCCCCCCC
Confidence            9999999986543345789999999998876 553      258999999999999999998766679999998643221


Q ss_pred             CCCCceEEeCCCC
Q 040132          257 GSNTTYLRFGPVT  269 (271)
Q Consensus       257 ~~~~g~l~fG~~~  269 (271)
                      . ..|+|+||+.+
T Consensus       249 ~-~~g~l~fG~~~  260 (431)
T PLN03146        249 N-GTSKINFGTNA  260 (431)
T ss_pred             C-CcceEEeCCcc
Confidence            1 47999999853

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 1e-29
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-29
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 3e-24
1j71_A 334 Candidapepsin, aspartic proteinase; candida tropic 6e-07
2qzx_A 342 Candidapepsin-5; aspartic proteinase, aspartyl pro 2e-06
3fv3_A 339 SAPP1P-secreted aspartic protease 1; secreted aspa 8e-06
3pvk_A 342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-05
3psg_A 370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 8e-05
1bxo_A 323 Protein (penicillopepsin); hydrolase, phosphonate 1e-04
1ibq_A 325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-04
1izd_A 323 Aspartic proteinase; sugar binding, acid protease, 4e-04
1mpp_A 361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 6e-04
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 7e-04
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
 Score =  114 bits (285), Expect = 1e-29
 Identities = 39/186 (20%), Positives = 54/186 (29%), Gaps = 16/186 (8%)

Query: 86  ANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLA 145
             T++Y      G++     LV+D      W  C+G      I   S     +  Y    
Sbjct: 11  PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPG 65

Query: 146 CDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFP---GDKNTSLTFANVTFGCG 202
           C  P C      K   +Y +    G+   G LS   F      G K  S     V   C 
Sbjct: 66  CPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACA 125

Query: 203 YDNQNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTTY 262
                 S            GV GL     ++  Q+      + +    L   T G     
Sbjct: 126 PSKLLASLPRG------STGVAGLANSGLALPAQVASAQ--KVANRFLLCLPTGGPGVAI 177

Query: 263 LRFGPV 268
              GPV
Sbjct: 178 FGGGPV 183
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3psg_A 370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2apr_A 325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3c9x_A 329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1oew_A 329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
2x0b_A 383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 99.98
2bju_A 453 Plasmepsin II; aspartic proteinase, drug design, m 99.98
1tzs_A 351 Cathepsin E; hydrolase, aspartic protease, activat 99.97
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 99.97
1htr_B 329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 99.97
4aa9_A 320 Chymosin; hydrolase, aspartic peptidase, rennet; H 99.97
1am5_A 324 Pepsin, acid proteinase; aspartyl protease, hydrol 99.97
1j71_A 334 Candidapepsin, aspartic proteinase; candida tropic 99.97
3cms_A 323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 99.97
2qzx_A 342 Candidapepsin-5; aspartic proteinase, aspartyl pro 99.97
1mpp_A 361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 99.97
1dpj_A 329 Proteinase A; proteinase A, hydrolase-hydrolase in 99.97
3fv3_A 339 SAPP1P-secreted aspartic protease 1; secreted aspa 99.97
1miq_A 375 Plasmepsin; aspartic proteinase zymogen, domain op 99.97
3k1w_A 341 Renin; protease, alternative splicing, aspartyl pr 99.97
3pvk_A 342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 99.97
3qvc_A 451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 99.96
1ibq_A 325 Aspergillopepsin; aspartic proteinase, hydrolase; 99.96
1izd_A 323 Aspartic proteinase; sugar binding, acid protease, 99.96
1yg9_A 330 Aspartic protease BLA G 2; allegren, hydrolase, al 99.96
1bxo_A 323 Protein (penicillopepsin); hydrolase, phosphonate 99.96
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 99.96
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 99.95
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 99.95
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 99.95
3vf3_A 402 Beta-secretase 1; structure-based drug design, hyd 99.95
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 99.95
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.91
1lya_B 241 Cathepsin D; lysosomal aspartic protease; HET: NAG 98.78
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 82.21
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 81.86
2hs1_A99 HIV-1 protease; ultra-high resolution active site 81.09
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=3e-35  Score=274.82  Aligned_cols=171  Identities=22%  Similarity=0.363  Sum_probs=140.4

Q ss_pred             CCCCCCcccCCCCCCceEEEEEeecCCCceeEEEEeCCCCceeeeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCC
Q 040132           74 ETLKPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVP  153 (271)
Q Consensus        74 ~~~~~pl~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~c~~C~~C~~~~~~~y~p~~SsT~~~~~C~s~~C~~  153 (271)
                      .++..||..+  ..+++|+++|.||||||++.|+|||||+++||+|.+|             .+|+||+.++|.++.|..
T Consensus         7 ~~~~~pv~~d--~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~   71 (413)
T 3vla_A            7 SALVVPVKKD--ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSL   71 (413)
T ss_dssp             SEEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHH
T ss_pred             ccEEEEeeec--CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccc
Confidence            3455778776  4689999999999999999999999999999999875             279999999999999964


Q ss_pred             ---CC-----------cCCCCceeEEEc-CCCceEEEEEEEEEEEecCCCCC----ceeecceEEEeEEecCCCcccccC
Q 040132          154 ---KL-----------CSKGLCSYDWKY-KEGSEIKGVLSSESFTFPGDKNT----SLTFANVTFGCGYDNQNVSFGGYM  214 (271)
Q Consensus       154 ---~~-----------C~~~~c~~~~~Y-~~Gs~~~G~~~~D~v~~~~~~~~----~~~~~~~~FGc~~~~~~~~f~~~~  214 (271)
                         ..           |..+.|.|.+.| +||+.+.|++++|+|+|+..++.    .+.++++.|||++.+....+    
T Consensus        72 ~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~----  147 (413)
T 3vla_A           72 SGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL----  147 (413)
T ss_dssp             TTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS----
T ss_pred             cccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc----
Confidence               22           444449999999 58888999999999999854332    36788999999998632111    


Q ss_pred             CCCCCcceEEecCCCCCChHHhhccc--CCCcEEEEecCCCCCCCCCCceEEeCCCC
Q 040132          215 GSDNIIAGVFGLRAGQRSILRQLEPE--TNVRFSYCLRLYPTTDGSNTTYLRFGPVT  269 (271)
Q Consensus       215 ~~~~~~dGIlGLg~~~~S~~~ql~~~--~~~~FS~cL~~~~~~~~~~~g~l~fG~~~  269 (271)
                        ....|||||||++++|+++||+.+  ++++|||||++.. .   .+|+|+||+.+
T Consensus       148 --~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~-~---~~G~l~fGg~~  198 (413)
T 3vla_A          148 --ASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGST-S---SNSVIIFGNDP  198 (413)
T ss_dssp             --CTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCS-S---SCEEEEEESCC
T ss_pred             --ccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCC-C---CceEEEECCCc
Confidence              347899999999999999999876  4699999999842 2   57999999875
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 271
d1t6ex_ 381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-23
d1dpja_ 329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 6e-13
d1miqa_ 373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 9e-13
d1qdma2 337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 2e-12
d1am5a_ 324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-11
d1hrna_ 337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-11
d2bjua1 329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-11
d1mppa_ 357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 3e-11
d1oewa_ 330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 4e-11
d1izea_ 323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 6e-11
g1htr.1 372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 8e-11
d1bxoa_ 323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 8e-11
g1lya.1 338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-10
d2qp8a1 387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 3e-10
d3cmsa_ 323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 4e-10
d2apra_ 325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 6e-10
g1b5f.1 326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 1e-09
d1j71a_ 334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-09
d1eaga_ 342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 3e-09
d3psga_ 370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 9e-08
d1smra_ 335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-07
d1wkra_ 340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 8e-07
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 96.3 bits (238), Expect = 1e-23
 Identities = 36/183 (19%), Positives = 52/183 (28%), Gaps = 10/183 (5%)

Query: 86  ANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLA 145
             T++Y      G++     LV+D      W  C+G      I   S     +  Y    
Sbjct: 11  PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPG 65

Query: 146 CDHPLCVPKLCSKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDN 205
           C  P C      K   +Y +    G+   G LS   F      + S   + V  G     
Sbjct: 66  CPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVA-NTTDGSKPVSKVNVGVLAAC 124

Query: 206 QNVSFGGYMGSDNIIAGVFGLRAGQRSILRQLEPETNVRFSYCLRLYPTTDGSNTTYLRF 265
                           GV GL     ++  Q+        +    L   T G        
Sbjct: 125 APSKLL--ASLPRGSTGVAGLANSGLALPAQVASAQK--VANRFLLCLPTGGPGVAIFGG 180

Query: 266 GPV 268
           GPV
Sbjct: 181 GPV 183
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
d3psga_ 370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 99.97
g1htr.1 372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 99.97
d1dpja_ 329 Acid protease {Baker's yeast (Saccharomyces cerevi 99.96
d1am5a_ 324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 99.96
d2apra_ 325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 99.96
d1oewa_ 330 Endothiapepsin {Chestnut blight fungus (Endothia p 99.95
d1miqa_ 373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.95
d1mppa_ 357 Pepsin {Mucor pusillus [TaxId: 4840]} 99.94
d1smra_ 335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 99.94
g1lya.1 338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 99.94
d1j71a_ 334 Acid protease {Yeast (Candida tropicalis) [TaxId: 99.93
d1eaga_ 342 Acid protease {Yeast (Candida albicans) [TaxId: 54 99.93
d2bjua1 329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.93
d1hrna_ 337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 99.93
d1qdma2 337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.92
d2qp8a1 387 beta-secretase (memapsin) {Human (Homo sapiens) [T 99.92
g1b5f.1 326 Plant acid proteinase, phytepsin {Cynara carduncul 99.92
d1izea_ 323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 99.92
d1t6ex_ 381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 99.91
d3cmsa_ 323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 99.91
d1wkra_ 340 Acid protease {Irpex lacteus (Polyporus tulipifera 99.9
d1bxoa_ 323 Acid protease {Fungus (Penicillium janthinellum), 99.9
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=3.9e-31  Score=240.88  Aligned_cols=161  Identities=20%  Similarity=0.307  Sum_probs=133.4

Q ss_pred             CCCcccCCCCCCceEEEEEeecCCCceeEEEEeCCCCceeeeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCc
Q 040132           77 KPPVYPSPFANTNIYITKISIGSTQFSPYLVVDTGSDDRWLQCEGCTSCFPIKGGSFPVKESKTYRGLACDHPLCVPKLC  156 (271)
Q Consensus        77 ~~pl~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~c~~C~~C~~~~~~~y~p~~SsT~~~~~C~s~~C~~~~C  156 (271)
                      ..||.+.   .+.+|+++|.||||||++.|+|||||+++||+|++|..|..+.++.|||++|+||+...           
T Consensus        47 ~~~l~n~---~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~-----------  112 (370)
T d3psga_          47 DEPLENY---LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS-----------  112 (370)
T ss_dssp             CCTTGGG---TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-----------
T ss_pred             ccccccc---cCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccCC-----------
Confidence            4566654   47899999999999999999999999999999999999988889999999999999876           


Q ss_pred             CCCCceeEEEcCCCceEEEEEEEEEEEecCCCCCceeecceEEEeEEecCCCcccccCCCCCCcceEEecCCCCCC----
Q 040132          157 SKGLCSYDWKYKEGSEIKGVLSSESFTFPGDKNTSLTFANVTFGCGYDNQNVSFGGYMGSDNIIAGVFGLRAGQRS----  232 (271)
Q Consensus       157 ~~~~c~~~~~Y~~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~FGc~~~~~~~~f~~~~~~~~~~dGIlGLg~~~~S----  232 (271)
                          |.|.+.|++|+ ++|.++.|++.++.     ..++++.|||+....+..+.     ..+.+||+|||++..+    
T Consensus       113 ----~~~~~~Yg~Gs-~~G~~~~d~~~~~~-----~~~~~~~f~~~~~~~~~~~~-----~~~~~Gi~gl~~~~~~~~~~  177 (370)
T d3psga_         113 ----QELSITYGTGS-MTGILGYDTVQVGG-----ISDTNQIFGLSETEPGSFLY-----YAPFDGILGLAYPSISASGA  177 (370)
T ss_dssp             ----EEEEEESSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCGGGG-----GCSCSEEEECSCGGGCGGGC
T ss_pred             ----CcEEEEeCCce-EEEEEEEEEEeeec-----eeeeeeEEEEEeeccCceec-----ccccccccccccCcccccCC
Confidence                89999999995 78999999999984     68899999999988762332     3478999999987654    


Q ss_pred             --hHHhhccc---CCCcEEEEecCCCCCCCCCCceEEeCCCCC
Q 040132          233 --ILRQLEPE---TNVRFSYCLRLYPTTDGSNTTYLRFGPVTE  270 (271)
Q Consensus       233 --~~~ql~~~---~~~~FS~cL~~~~~~~~~~~g~l~fG~~~~  270 (271)
                        +..++..+   ..+.||+|+.+...    .+|.|+||+.++
T Consensus       178 ~~~~~~l~~~~~i~~~~fs~~l~~~~~----~~g~l~~Gg~d~  216 (370)
T d3psga_         178 TPVFDNLWDQGLVSQDLFSVYLSSNDD----SGSVVLLGGIDS  216 (370)
T ss_dssp             CCHHHHHHHTTCSSSSEEEEEEC---------CEEEEETCCCG
T ss_pred             CchhhhhhhhcccccceeEEEeecCCC----CCceEecCCcCc
Confidence              55666655   36899999987543    479999999764
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure