Citrus Sinensis ID: 040151

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MALHGTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNGEVVLGSSKS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccEEEEccccc
Secondary Structure Prediction (SSPRO)
ccEEHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHccHHHHHcccccccHHHHHHEEHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHccccHHHHHHHHHHHcccccHHccccccccccccccccccHccccccccccccccccccccHHHccccccccccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEcccc
Coil and Loop (DISEMBL)
MALHGTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASiypekfegekglnLMKLAKLTADDMTavnnmrlfggssekkksrrgkkrtarkdrsggeeickypRSLKIWHKLVEKLgknelskddypshfavineapvahsmrsrrtrtwarprssddgcssdsVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNGEVVLGSSKS
Flexible Loop (DISEMBL)
MALHGTLHVTFvahdsalhqKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVltakedvtldnKLRLLMIAASiypekfegekgLNLMKLAKLTADDMTAVnnmrlfggssekkksrrgkkrtarkdrsggeeickyprslkIWHKLVEKLGKNELSKDDYPSHFAVineapvahsmrsrrtrtwarprssddgcssDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLttelngevvlgssks
Low Complexity Region (SEG)
MALHGTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFggssekkksrrgkkrTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHsmrsrrtrtwarprssDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNGEVVLGSSKS
Disordered region (IsUnstruct)
****GTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAV********************************ICKYPRSLKIWHKLVEKLGKNEL****YPSHFAVIN******************************VLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNGEVVL*****
Disordered Region (DISOPRED)
***HGTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRL*****************************KYPRSLKIWHKLVEKLGKNELSKDDYPSH**************************************************IFEFVVGGATSSELRICYKLTTELNGEVVLGSS**
Disordered Region (DISEMBL)
MALHGTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGG**********************EEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVA************************SVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNGEVVLGSSKS
Disordered Region (DISPRO)
MALHGTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSE*********************ICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFA********************************************IGQCIFEFVVGGATSSELRICYKLTTELNGEVVLG****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALHGTLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNGEVVLGSSKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
Q9C5X3	666	SNARE-interacting protein	yes	no	0.908	0.342	0.534	6e-66
Q9C5P7	673	Protein transport Sec1a O	no	no	0.912	0.340	0.538	2e-58
Q9SZ77	662	Protein transport Sec1b O	no	no	0.908	0.344	0.534	3e-58
Q5VNU3	659	Probable protein transpor	no	no	0.944	0.359	0.449	1e-50
Q7XWP3	665	Probable protein transpor	no	no	0.912	0.344	0.474	2e-44
Q54QC8	598	Protein transport protein	yes	no	0.808	0.339	0.242	6e-07
O94590	693	Protein transport protein	yes	no	0.864	0.313	0.236	2e-05
Q6R748	594	Syntaxin-binding protein	yes	no	0.784	0.331	0.242	0.0001
P61765	594	Syntaxin-binding protein	yes	no	0.780	0.329	0.238	0.0004
Q5R6D2	594	Syntaxin-binding protein	yes	no	0.780	0.329	0.238	0.0004

>sp|Q9C5X3|KEULE_ARATH SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2

 Score =  250 bits (639), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 139/260 (53%), Positives = 175/260 (67%), Gaps = 32/260 (12%)

Query: 18  LHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIY 77
           + +K+N +IRE GLRELGQLEQDLVF DA  KDVIK L+ +E+ + + KLRLLMI A+IY
Sbjct: 383 IARKLNDLIREQGLRELGQLEQDLVFGDAGMKDVIKYLSTQEEASREGKLRLLMILATIY 442

Query: 78  PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTAR 127
           PEKFEGEKG NLMKLAKL++DDMTAVNNM L G + + KK+  G          KKR  R
Sbjct: 443 PEKFEGEKGQNLMKLAKLSSDDMTAVNNMSLLGSAVDAKKNTPGGFTLKFDLHKKKRAVR 502

Query: 128 KDRSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAH---------- 177
           K+R   E   +  R   +  +L+EKL K EL K+D+P    + + +P  H          
Sbjct: 503 KERQ-EEAAWQLSRFYPMIEELIEKLSKGELPKEDFP---CMNDPSPSFHGSTSLSSAAS 558

Query: 178 --------SMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSE 229
                   SMRSRRT TWA+PR SDDG SSDSVL+HA S F K+GQ IF F+VGGAT SE
Sbjct: 559 SSQGQAAQSMRSRRTPTWAKPRGSDDGYSSDSVLRHASSDFRKMGQRIFVFIVGGATRSE 618

Query: 230 LRICYKLTTELNGEVVLGSS 249
           L++C+KL+T+L  EV+LGS+
Sbjct: 619 LKVCHKLSTKLKREVILGST 638

Regulator of vesicle trafficking involved in cytokinesis and root hair development, but not required for cell elongation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5P7|SEC1A_ARATH Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3

 Score =  225 bits (573), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/260 (53%), Positives = 169/260 (65%), Gaps = 31/260 (11%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIR+TGLR+LGQLEQDLVF DA  KDVI  L   +D   +NKLRLLMI A++YPEK
Sbjct: 381 KINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINFLRTNQDTNPENKLRLLMIYATVYPEK 440

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKK--------KSRRGKKRTA-RKDRS 131
           FEG+KG+ LM+LA+L+  DM  ++NM+L  GS E K        K   GK + A RKDRS
Sbjct: 441 FEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPENKAKSGSFSLKFDAGKTKQANRKDRS 500

Query: 132 GGEEICKYPRSLKIWHKLVEKLGKNELSKDDY-----PSH-----------------FAV 169
           G EE  +  R   +  +L+EKL K +LSK DY      SH                  AV
Sbjct: 501 GEEETWQLFRFYPMIEELLEKLVKGDLSKSDYLCMNQSSHKEESEARTGSVRKSSAPTAV 560

Query: 170 INEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSE 229
                  HSMRSRRT TWARP SSDDG SSDSVLK A + F+K+GQ IF F++GGAT SE
Sbjct: 561 PERKATPHSMRSRRTATWARPHSSDDGYSSDSVLKSASTEFKKLGQRIFVFIIGGATRSE 620

Query: 230 LRICYKLTTELNGEVVLGSS 249
           LR+C+KLT+ L  EVVLGS+
Sbjct: 621 LRVCHKLTSSLRREVVLGST 640

Involved in the vesicle trafficking. Binds syntaxins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZ77|SEC1B_ARATH Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=3

 Score =  225 bits (573), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/247 (53%), Positives = 161/247 (65%), Gaps = 19/247 (7%)

Query: 22  INRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKF 81
           INR I E GLR+LGQLEQDLVF DA  KDVIK L+    ++ ++KLRL+MI A+IYP+KF
Sbjct: 388 INRTIMEQGLRDLGQLEQDLVFGDAGRKDVIKFLSTNHIISHESKLRLIMIVAAIYPKKF 447

Query: 82  EGEKGLNLMKLAKLTADDMTAVNNMRLFGG-SSEKKKSRRGK----------KRTARKDR 130
           EGEKG  +M+LAKL+ DD+ AVNNMRL G   +E KKS  G           KR AR+DR
Sbjct: 448 EGEKGRKMMELAKLSGDDVVAVNNMRLLGPVHTECKKSTTGSFPLKFDVLKTKRAARRDR 507

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP------SHFAVINEAPVAHSM--RSR 182
            G  +  +  R   I  +LVEKL K  L K DYP        F   + +P A  +   SR
Sbjct: 508 VGETQTWQLSRFYPIVEELVEKLSKGHLPKQDYPCMNEPKPTFYSGSLSPSASPVLPHSR 567

Query: 183 RTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG 242
           RT TWAR   SDDG  SDSVL  A SGF++ GQ IF F+VGGAT SELR+C+KLT +L+ 
Sbjct: 568 RTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQRIFVFIVGGATRSELRVCHKLTEKLDR 627

Query: 243 EVVLGSS 249
           EV+LGSS
Sbjct: 628 EVILGSS 634

Involved in the vesicle trafficking. Binds syntaxins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5VNU3|SEC1B_ORYSJ Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1

 Score =  199 bits (507), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/269 (44%), Positives = 161/269 (59%), Gaps = 32/269 (11%)

Query: 6   TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDN 65
           TLH+           KIN+ IRE GLR++GQ+EQDLVF DA  K+VI +L +K+D++ +N
Sbjct: 375 TLHIEIAG-------KINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPEN 427

Query: 66  KLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG---- 121
           KLRLL+I A +YPEKFEG+KG  LM+LAKL  D+M A+N++R   GS  KK SR G    
Sbjct: 428 KLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKASRPGGFSL 487

Query: 122 ------KKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPS---------- 165
                 KK  AR +R  G+E     R   +  +L+EKL K  L  ++YPS          
Sbjct: 488 KFDAQKKKNAARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSEPSSTEQG 547

Query: 166 --HFAVINEAPVAHSM--RSRRTRTWARPRS-SDDGCSSDSVLKHALSGFEKIGQCIFEF 220
               A   +   A  M  RSRRT TWA+ R+  D   S  SVL+H  + F+++G  IF F
Sbjct: 548 STQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVF 607

Query: 221 VVGGATSSELRICYKLTTELNGEVVLGSS 249
           ++GGAT SELR  +KLT +L  E+VLGSS
Sbjct: 608 MIGGATRSELRTVHKLTMKLKREIVLGSS 636

Involved in the vesicle trafficking. Binds syntaxins.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XWP3|SEC1A_ORYSJ Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2

 Score =  179 bits (454), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/253 (47%), Positives = 153/253 (60%), Gaps = 24/253 (9%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           K+N  I+E  L+++GQLEQDLVF DA  K++I       D++ +NKLRLLM+ A+I P+K
Sbjct: 386 KLNSTIKEQQLKDVGQLEQDLVFGDAGTKELINFFRTHLDISRENKLRLLMVYAAINPDK 445

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSR---------RGKKRTARKDRS 131
              +KG  LM+LA L+ADDM AV+NMR   G   KK S          R K+   RK+R 
Sbjct: 446 TRSDKGAKLMQLAGLSADDMIAVSNMRCLCGHDSKKSSAGGFTLKFDLRKKRHGIRKERI 505

Query: 132 GGEEICKYPRSLKIWHKLVEKLGKNELSKDDY-------PSHFAV----INEAPV---AH 177
           G E      R   I  +L+EKL K EL KD+Y       PS   +       +P    A 
Sbjct: 506 GEESKWMLSRFYPILEELIEKLSKGELPKDEYHYLNDPSPSFRGIPSASTQTSPAHQPAQ 565

Query: 178 SMRSRRT-RTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKL 236
           SMRSRRT  TWARPR SDDG SSDSVLKH  S   K+GQ +F FV+GGAT SEL   +KL
Sbjct: 566 SMRSRRTGGTWARPRDSDDGYSSDSVLKHTSSNSRKLGQRLFVFVIGGATRSELCAAHKL 625

Query: 237 TTELNGEVVLGSS 249
           +++L  E++LGSS
Sbjct: 626 SSKLKREIILGSS 638

Involved in the vesicle trafficking. Binds syntaxins.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q54QC8|SEC1_DICDI Protein transport protein sec1 OS=Dictyostelium discoideum GN=sec1 PE=3 SV=1

 Score = 54.7 bits (130), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 32/235 (13%)

Query: 31  LRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLD-------NKLRLLMIAASIYPEKFEG 83
           L +L  LEQDL   +    +  K +T +    L        NK+RLLM+   I  +  + 
Sbjct: 362 LEQLAYLEQDLATGEDANGNSPKNVTGRLSNYLSDFSAEKYNKIRLLMMYI-ISQDGIKE 420

Query: 84  EKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTA----RKDRSGGEEICKY 139
           E    LM++A ++  +  A  N+R  G +    K  +GKK  +    RK  SG       
Sbjct: 421 EDRRRLMEMAGISQSEQNAFTNLRYLGVT--LMKGAKGKKPISPPKNRKSESGN-----V 473

Query: 140 PRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWAR-----PRSSD 194
           P  +  +  +V+ + +N +++    + F  + E P+A +  +  ++   +     PR +D
Sbjct: 474 PYEVSRYVPVVKDIAENIINETLPSTDFPFVKEEPIARATNAPVSKVSLKGKSKQPRWAD 533

Query: 195 DGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNGEVVLGSS 249
                +   K++       G  +  FV+GG T SE+R  Y+L++     + +GS+
Sbjct: 534 PNVQVEET-KYS-------GSKLIIFVIGGMTFSEMRSIYELSSHYKKNIYIGST 580

Involved in the vesicle trafficking. Binds syntaxins.

Dictyostelium discoideum (taxid: 44689)

>sp|O94590|SEC1_SCHPO Protein transport protein sec1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec1 PE=3 SV=1

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 41/258 (15%)

Query: 6   TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLD- 64
           +LH+T       + Q+   I  +  L  +G +EQDL         V + + ++    LD 
Sbjct: 346 SLHLT-------MAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDE 398

Query: 65  ------NKLRLLMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKS 118
                  K+RLL++   IY +    +    L + + L+        N+   G    K  +
Sbjct: 399 GNAEESTKIRLLLLYI-IYRDGIILQDLFRLFRHSNLSTSREQIFQNLEQLGTRVIKNLT 457

Query: 119 RRGKKRTARKDR-SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAH 177
            +  KR    +    GE++ +  R +     ++E L +++L  + +P    V N  P   
Sbjct: 458 DQSSKRKEVANSLPAGEDVYELSRYVPTLKVVLENLIQDKLDPELFP---YVRNTTPQTE 514

Query: 178 ------SMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELR 231
                 S+RS R  +W R RS       + +L                FV GG T SELR
Sbjct: 515 VSMEQTSLRSSRP-SWTRSRSMASKLPREKMLV---------------FVAGGTTFSELR 558

Query: 232 ICYKLTTELNGEVVLGSS 249
            CY+L+ + N ++ +GS+
Sbjct: 559 TCYELSDKYNKDIYIGST 576

Involved in the final stage of protein secretion.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q6R748|STXB1_CHICK Syntaxin-binding protein 1 OS=Gallus gallus GN=STXBP1 PE=2 SV=1

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 30/227 (13%)

Query: 33  ELGQLEQDLVF-CDAEFKDVIKVLTAKEDVTLD------NKLRLLMIAASIYPEKFEGEK 85
           +L ++EQDL    DAE + +   + A   + LD      +K+R++++   I+ +    E+
Sbjct: 364 KLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDGNVSTYDKIRIILLY--IFLKNGITEE 421

Query: 86  GLN-LMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLK 144
            LN L++ A++ A+D   + NM   G       + R + +  RK+R   E+  +  R   
Sbjct: 422 NLNKLIQHAQIPAEDSEIITNMAHLGVPIITDSTLRRRSKPERKERIS-EQTYQLSRWTP 480

Query: 145 IWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLK 204
           I   ++E   +++L    YP + +  + A  + +  S R   W                K
Sbjct: 481 IIKDIMEDTIEDKLDTKHYP-YISTRSSASFSTTAVSARYGHWH---------------K 524

Query: 205 HALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG--EVVLGSS 249
           +   G  + G  +  F++GG + +E+R  Y++ T+ NG  EV++GS+
Sbjct: 525 NKAPGEYRSGPRLIIFILGGVSLNEMRCAYEV-TQANGKWEVLIGST 570

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxins, components of the synaptic vesicle fusion machinery. May play a role in determining the specificity of intracellular fusion reactions.

Gallus gallus (taxid: 9031)

>sp|P61765|STXB1_RAT Syntaxin-binding protein 1 OS=Rattus norvegicus GN=Stxbp1 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 30/226 (13%)

Query: 34  LGQLEQDLVF-CDAE---FKDVIKVLTA---KEDVTLDNKLRLLMIAASIYPEKFEGEKG 86
           L ++EQDL    DAE    KD ++ +       +V+  +K+R++++   I+ +    E+ 
Sbjct: 365 LCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVSTYDKIRIILLY--IFLKNGITEEN 422

Query: 87  LN-LMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKI 145
           LN L++ A++  +D   + NM   G       + R + +  RK+R   E+  +  R   I
Sbjct: 423 LNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKERIS-EQTYQLSRWTPI 481

Query: 146 WHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKH 205
              ++E   +++L    YP + +  + A  + +  S R   W                K+
Sbjct: 482 IKDIMEDTIEDKLDTKHYP-YISTRSSASFSTTAVSARYGHWH---------------KN 525

Query: 206 ALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG--EVVLGSS 249
              G  + G  +  F++GG + +E+R  Y++ T+ NG  EV++GS+
Sbjct: 526 KAPGEYRSGPRLIIFILGGVSLNEMRCAYEV-TQANGKWEVLIGST 570

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions.

Rattus norvegicus (taxid: 10116)

>sp|Q5R6D2|STXB1_PONAB Syntaxin-binding protein 1 OS=Pongo abelii GN=STXBP1 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 30/226 (13%)

Query: 34  LGQLEQDLVF-CDAE---FKDVIKVLTA---KEDVTLDNKLRLLMIAASIYPEKFEGEKG 86
           L ++EQDL    DAE    KD ++ +       +V+  +K+R++++   I+ +    E+ 
Sbjct: 365 LCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVSTYDKIRIILLY--IFLKNGITEEN 422

Query: 87  LN-LMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKI 145
           LN L++ A++  +D   + NM   G       + R + +  RK+R   E+  +  R   I
Sbjct: 423 LNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKERIS-EQTYQLSRWTPI 481

Query: 146 WHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKH 205
              ++E   +++L    YP + +  + A  + +  S R   W                K+
Sbjct: 482 IKDIMEDTIEDKLDTKHYP-YISTRSSASFSTTAVSARYGHWH---------------KN 525

Query: 206 ALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG--EVVLGSS 249
              G  + G  +  F++GG + +E+R  Y++ T+ NG  EV++GS+
Sbjct: 526 KAPGEYRSGPRLIIFILGGVSLNEMRCAYEV-TQANGKWEVLIGST 570

May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
356514152	665	PREDICTED: SNARE-interacting protein KEU	0.912	0.344	0.617	2e-76
449442403	664	PREDICTED: SNARE-interacting protein KEU	0.912	0.344	0.601	5e-76
224125086	666	predicted protein [Populus trichocarpa]	0.912	0.343	0.607	7e-76
356563276	671	PREDICTED: SNARE-interacting protein KEU	0.912	0.341	0.617	1e-75
356563274	666	PREDICTED: SNARE-interacting protein KEU	0.912	0.343	0.617	2e-75
224071599	666	predicted protein [Populus trichocarpa]	0.912	0.343	0.595	6e-75
357477033	666	SNARE-interacting protein KEULE [Medicag	0.908	0.342	0.597	2e-73
255537107	663	plant sec1, putative [Ricinus communis]	0.908	0.343	0.595	8e-72
356497171	662	PREDICTED: SNARE-interacting protein KEU	0.904	0.342	0.597	2e-71
356540259	663	PREDICTED: SNARE-interacting protein KEU	0.904	0.342	0.597	3e-71

>gi|356514152|ref|XP_003525770.1| PREDICTED: SNARE-interacting protein KEULE-like [Glycine max]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/251 (61%), Positives = 179/251 (71%), Gaps = 22/251 (8%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIRE+GLRELG+LEQDLVF DA  KDVIK LT  ED + +NKLRLLMI ASIYPEK
Sbjct: 388 KINRIIRESGLRELGKLEQDLVFGDAGMKDVIKFLTTYEDTSRENKLRLLMILASIYPEK 447

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           FEGEKGLNLMK+AKLT +D  A+NN+R+ GG  + KK+             KKR ARKDR
Sbjct: 448 FEGEKGLNLMKVAKLTDEDTIAINNLRMLGGEPDTKKTSTSSFALKFDMHKKKRAARKDR 507

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP------------SHFAVINEAPVAHS 178
           SG EE  +  R   I  +L+EK+ KNELSK DYP             +   + + P AHS
Sbjct: 508 SGEEETWQLSRFYPIIEELIEKVSKNELSKLDYPCLNDPSPTFHGTPYAGPVTQNPPAHS 567

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT 238
           MRSRRT TWARPR SDDG SSDSVLKHA S F+K+GQ IF F+VGGAT SELRIC+KLT 
Sbjct: 568 MRSRRTPTWARPRGSDDGYSSDSVLKHASSDFKKMGQRIFIFIVGGATRSELRICHKLTG 627

Query: 239 ELNGEVVLGSS 249
           +L  EV+LGSS
Sbjct: 628 KLKREVILGSS 638

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442403|ref|XP_004138971.1| PREDICTED: SNARE-interacting protein KEULE-like [Cucumis sativus] gi|449505029|ref|XP_004162356.1| PREDICTED: SNARE-interacting protein KEULE-like [Cucumis sativus]

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 151/251 (60%), Positives = 177/251 (70%), Gaps = 22/251 (8%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           K+N+ I+E GLRELGQ+EQDLVF DA  KDVIK LT  ED + +NKLRLLMI A+IYPEK
Sbjct: 387 KLNKFIKEQGLRELGQIEQDLVFGDAGTKDVIKFLTTNEDASRENKLRLLMILAAIYPEK 446

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           FEGEKG NLMKLAKL  +DM AV NMRL G + + KKS  G          KKR  RK +
Sbjct: 447 FEGEKGQNLMKLAKLPPEDMNAVTNMRLLGTAPDSKKSSLGSFSLKFDIHKKKRAVRKQQ 506

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDY------------PSHFAVINEAPVAHS 178
           +GGEE  +  R   +  +LVEKL K ELSKDDY            PSH A +   P AHS
Sbjct: 507 NGGEETWQLSRFYPMIEELVEKLSKGELSKDDYPCLNDPSPTYHGPSHTAAVQPPPAAHS 566

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT 238
           MRSRRT TWARPR+SDDG SSDS+L+HA S F+K+GQ IF F+VGGAT SELR+C+KLT 
Sbjct: 567 MRSRRTPTWARPRNSDDGYSSDSILRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTA 626

Query: 239 ELNGEVVLGSS 249
           +L  EVVLGS+
Sbjct: 627 KLKREVVLGST 637

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125086|ref|XP_002329890.1| predicted protein [Populus trichocarpa] gi|222871127|gb|EEF08258.1| predicted protein [Populus trichocarpa]

 Score =  289 bits (740), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 153/252 (60%), Positives = 181/252 (71%), Gaps = 23/252 (9%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIRE+GLRELGQLEQDLVF DA   DVIK LT KED T +NKLRLLMI A+IYPEK
Sbjct: 388 KINRIIRESGLRELGQLEQDLVFGDAGMTDVIKFLTTKEDATRENKLRLLMILAAIYPEK 447

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           FEGE+G N+MK+ +L  DDM AVNNMRL   +SE KKS  G          KKR ARKDR
Sbjct: 448 FEGEEGHNIMKVVRLPQDDMNAVNNMRLLAVASETKKSSTGAFSLKFDIHKKKRAARKDR 507

Query: 131 SGGEEIC-KYPRSLKIWHKLVEKLGKNELSKDDYP------------SHFAVINEAPVAH 177
           +G EE   +  R   +  +L++KL K ELSKD+YP            S    +++AP  H
Sbjct: 508 TGAEETTWQLSRFYPMIEELIDKLNKGELSKDEYPCMNDPSPTFHGTSQSTPMHQAPAPH 567

Query: 178 SMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLT 237
           SMRSRRT TWARPR+SDDG SSDSVL+HA S F+K+GQ IF F+VGGAT SELR+C+KLT
Sbjct: 568 SMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLT 627

Query: 238 TELNGEVVLGSS 249
           ++L  EV+LGSS
Sbjct: 628 SKLQREVILGSS 639

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563276|ref|XP_003549890.1| PREDICTED: SNARE-interacting protein KEULE-like isoform 2 [Glycine max]

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/251 (61%), Positives = 178/251 (70%), Gaps = 22/251 (8%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIRE+GLRELGQLEQDLVF DA  KDVIK  T  ED T +NKLRLLMI ASIYPEK
Sbjct: 394 KINRIIRESGLRELGQLEQDLVFGDAGMKDVIKFFTTNEDTTRENKLRLLMILASIYPEK 453

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           FE EKGLNLMK+AKLT +D  A+NN+R+ GG  + K +             KKR ARKDR
Sbjct: 454 FEAEKGLNLMKVAKLTDEDAIAINNLRMLGGEPDTKTTSTSSFALKFDMHKKKRAARKDR 513

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP-----------SHFAV-INEAPVAHS 178
           SG E+  +  R   I  +L+EK+ KNELSK DYP           + +AV +   P AHS
Sbjct: 514 SGEEDTWQLSRFYPIIEELIEKVSKNELSKLDYPCLNDPSPTFHGTTYAVPVTHNPPAHS 573

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT 238
           MRSRRT TWARPR SDDG SSDSVLKHA S F+K+GQ IF F+VGGAT SELRIC+KLT 
Sbjct: 574 MRSRRTPTWARPRGSDDGYSSDSVLKHASSDFKKMGQRIFIFIVGGATRSELRICHKLTG 633

Query: 239 ELNGEVVLGSS 249
           +L  EV+LGSS
Sbjct: 634 KLKREVILGSS 644

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563274|ref|XP_003549889.1| PREDICTED: SNARE-interacting protein KEULE-like isoform 1 [Glycine max]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 155/251 (61%), Positives = 178/251 (70%), Gaps = 22/251 (8%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIRE+GLRELGQLEQDLVF DA  KDVIK  T  ED T +NKLRLLMI ASIYPEK
Sbjct: 389 KINRIIRESGLRELGQLEQDLVFGDAGMKDVIKFFTTNEDTTRENKLRLLMILASIYPEK 448

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           FE EKGLNLMK+AKLT +D  A+NN+R+ GG  + K +             KKR ARKDR
Sbjct: 449 FEAEKGLNLMKVAKLTDEDAIAINNLRMLGGEPDTKTTSTSSFALKFDMHKKKRAARKDR 508

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP-----------SHFAV-INEAPVAHS 178
           SG E+  +  R   I  +L+EK+ KNELSK DYP           + +AV +   P AHS
Sbjct: 509 SGEEDTWQLSRFYPIIEELIEKVSKNELSKLDYPCLNDPSPTFHGTTYAVPVTHNPPAHS 568

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT 238
           MRSRRT TWARPR SDDG SSDSVLKHA S F+K+GQ IF F+VGGAT SELRIC+KLT 
Sbjct: 569 MRSRRTPTWARPRGSDDGYSSDSVLKHASSDFKKMGQRIFIFIVGGATRSELRICHKLTG 628

Query: 239 ELNGEVVLGSS 249
           +L  EV+LGSS
Sbjct: 629 KLKREVILGSS 639

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071599|ref|XP_002303535.1| predicted protein [Populus trichocarpa] gi|222840967|gb|EEE78514.1| predicted protein [Populus trichocarpa]

 Score =  286 bits (732), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 150/252 (59%), Positives = 180/252 (71%), Gaps = 23/252 (9%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIRE GLRELGQLEQDLVF DA  KDVIK LT KED T +NKLRLLMI A+++PEK
Sbjct: 388 KINRIIRELGLRELGQLEQDLVFGDAGMKDVIKFLTMKEDTTRENKLRLLMILAAVFPEK 447

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
            EGE+GLN+MKLA+L  DDM AVNNMRL  G+S+ KK   G          KKR ARKDR
Sbjct: 448 LEGERGLNIMKLARLPQDDMNAVNNMRLLAGASDTKKRSTGAFSLKFDIHKKKRAARKDR 507

Query: 131 SGGEEIC-KYPRSLKIWHKLVEKLGKNELSKDDYP------------SHFAVINEAPVAH 177
           +G EE   +  R   +  +L++KL K ELSKD+YP            S    ++  P  H
Sbjct: 508 TGEEETTWQLSRFYPMIEELIDKLNKGELSKDEYPCMNDPSPSFHGTSQSTPMHHVPAPH 567

Query: 178 SMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLT 237
           SMRS+RT TWARPR+SDDG SSDS+L+HA S F+K+GQ IF F+VGGAT SELR+C+KLT
Sbjct: 568 SMRSKRTPTWARPRNSDDGYSSDSILRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLT 627

Query: 238 TELNGEVVLGSS 249
           ++L  EV+LGSS
Sbjct: 628 SKLQREVILGSS 639

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477033|ref|XP_003608802.1| SNARE-interacting protein KEULE [Medicago truncatula] gi|355509857|gb|AES90999.1| SNARE-interacting protein KEULE [Medicago truncatula]

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/251 (59%), Positives = 178/251 (70%), Gaps = 23/251 (9%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           K+N IIRETGLRELGQLEQDLVF DA  KDVIK LT KED + +NKLRLLMI A+IYPEK
Sbjct: 389 KVNSIIRETGLRELGQLEQDLVFGDAGMKDVIKFLTTKEDTSRENKLRLLMILAAIYPEK 448

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           FEGEKGLNLMK+AKLT DD  A+NN+R+ GG  + KK+             KKR  RK+R
Sbjct: 449 FEGEKGLNLMKVAKLTNDDAIAINNLRVLGGEPDAKKTSTSGFGLKFDMHKKKRAVRKNR 508

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP------------SHFAVINEAPVAHS 178
           +  EE  +  R   I  +L+EK+ KNELSK+DYP             +   + + P AHS
Sbjct: 509 A-EEETWQLSRFYPIIEELIEKVSKNELSKEDYPCLNDPSPSFHGTPYAGSVTQNPPAHS 567

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT 238
           +RSRRT TWARPR SDDG SSDSVLKH+ S F+K+GQ IF F+VGGAT SELRIC+KLT 
Sbjct: 568 IRSRRTPTWARPRGSDDGYSSDSVLKHSSSDFKKMGQRIFIFIVGGATRSELRICHKLTG 627

Query: 239 ELNGEVVLGSS 249
           +L  EV+LGSS
Sbjct: 628 KLKREVILGSS 638

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537107|ref|XP_002509620.1| plant sec1, putative [Ricinus communis] gi|223549519|gb|EEF51007.1| plant sec1, putative [Ricinus communis]

 Score =  276 bits (705), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 150/252 (59%), Positives = 176/252 (69%), Gaps = 24/252 (9%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           K+NRIIRE GLR++GQLEQDLVF D    DVI+ L   E  T +NKLRLLMI A+IYPEK
Sbjct: 386 KVNRIIRELGLRDIGQLEQDLVFGDKGTTDVIRFLNTNEGATRENKLRLLMILAAIYPEK 445

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           F+GEKGLNLMKLAKL  DDM AVNNMRL  GS E KK   G          KKR ARKDR
Sbjct: 446 FDGEKGLNLMKLAKLPEDDMNAVNNMRLI-GSLESKKGSAGAFSLKFDLHKKKRAARKDR 504

Query: 131 SGGEEIC-KYPRSLKIWHKLVEKLGKNELSKDDYP------------SHFAVINEAPVAH 177
           SG EE   +  R   +  +L+EKL K ELSK++YP            SH A +N+APV H
Sbjct: 505 SGAEETTWQLSRFYPMIEELIEKLSKGELSKEEYPCMNDPSATFHGTSHPASVNQAPVVH 564

Query: 178 SMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLT 237
           S RSR   TWARPR+SDDG SSDS+L+HA S F ++G+ IF F+VGGAT SELR+C+KLT
Sbjct: 565 SRRSRPAATWARPRNSDDGYSSDSILRHASSDFRRMGRRIFVFIVGGATRSELRVCHKLT 624

Query: 238 TELNGEVVLGSS 249
           ++L  EVVLGSS
Sbjct: 625 SKLQREVVLGSS 636

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497171|ref|XP_003517436.1| PREDICTED: SNARE-interacting protein KEULE-like [Glycine max]

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 150/251 (59%), Positives = 176/251 (70%), Gaps = 24/251 (9%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIRE+GLRELGQLEQDLVF DA  KDVIK  T KED+T +NKLRLLMI AS+YPEK
Sbjct: 387 KINRIIRESGLRELGQLEQDLVFGDATTKDVIKFFTMKEDITHENKLRLLMILASVYPEK 446

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG----------KKRTARKDR 130
           FEGEKG NLM+LAKLT +DM  V N R+ GG    KKS             KK  ARK+R
Sbjct: 447 FEGEKGQNLMRLAKLTEEDMNIVPNFRMLGGQPVTKKSLTAAFGLKFDIHKKKHAARKER 506

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP-----------SHFA-VINEAPVAHS 178
            G EE  +  R   I  +L+EKL KNELSK+DYP           S F+  +N+ P  HS
Sbjct: 507 PGEEEKWQLSRFYPIIEELLEKLMKNELSKEDYPCLNDPSPSYQGSPFSGPVNQNP--HS 564

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT 238
           MRSRRT TWARP+ S+DG SSDSVL+HA S F ++GQ IF F+VGGAT SELR+C+KLT 
Sbjct: 565 MRSRRTPTWARPQGSEDGYSSDSVLRHASSDFRRMGQRIFLFIVGGATRSELRVCHKLTE 624

Query: 239 ELNGEVVLGSS 249
           +L  E++LGSS
Sbjct: 625 KLKREIILGSS 635

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540259|ref|XP_003538607.1| PREDICTED: SNARE-interacting protein KEULE-like [Glycine max]

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/251 (59%), Positives = 175/251 (69%), Gaps = 24/251 (9%)

Query: 21  KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
           KINRIIRE+GLRELGQLEQDLVF DA  KDVIK  T  ED+  +NKLRLLMI AS+ PEK
Sbjct: 388 KINRIIRESGLRELGQLEQDLVFGDATTKDVIKFFTMTEDIAHENKLRLLMILASVCPEK 447

Query: 81  FEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSR----------RGKKRTARKDR 130
           FEGEKG NLM+LAKLT +DM  V+NMR+ GG    KK              KKR ARKDR
Sbjct: 448 FEGEKGQNLMRLAKLTEEDMNVVHNMRMLGGQPVTKKKLTTAFGLKFDIHKKKRAARKDR 507

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP-----------SHFA-VINEAPVAHS 178
            G EE  +  R   I  +L+EKL KNELSK+DYP           S F+  +N+ P  HS
Sbjct: 508 PGEEEKWQLSRFYPIIEELLEKLTKNELSKEDYPCLNDPSPSYHGSPFSGPVNQNP--HS 565

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT 238
           MRSRRT TWARPR S+DG SSDSVL+HA S F ++GQ IF F+VGGAT SELR+C+KLT 
Sbjct: 566 MRSRRTPTWARPRGSEDGYSSDSVLRHASSDFRRMGQRIFVFIVGGATRSELRVCHKLTE 625

Query: 239 ELNGEVVLGSS 249
           +L  E++LGSS
Sbjct: 626 KLKREIILGSS 636

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
TAIR|locus:2034670	666	KEU "keule" [Arabidopsis thali	0.573	0.216	0.516	9.4e-31
TAIR|locus:2025482	673	SEC1A "secretory 1A" [Arabidop	0.569	0.212	0.5	5.3e-29
TAIR|locus:2118126	662	SEC1B [Arabidopsis thaliana (t	0.569	0.216	0.487	1e-27

TAIR|locus:2034670 KEU "keule" [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 9.4e-31, P = 9.4e-31
 Identities = 80/155 (51%), Positives = 98/155 (63%)

Query:    20 QKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPE 79
             +K+N +IRE GLRELGQLEQDLVF DA  KDVIK L+ +E+ + + KLRLLMI A+IYPE
Sbjct:   385 RKLNDLIREQGLRELGQLEQDLVFGDAGMKDVIKYLSTQEEASREGKLRLLMILATIYPE 444

Query:    80 KFEGEKGLNLMKLAKLTADDMTAVNNMRLFXXXXXXXXXXXXXXX----------TARKD 129
             KFEGEKG NLMKLAKL++DDMTAVNNM L                            RK+
Sbjct:   445 KFEGEKGQNLMKLAKLSSDDMTAVNNMSLLGSAVDAKKNTPGGFTLKFDLHKKKRAVRKE 504

Query:   130 RSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP 164
             R   E   +  R   +  +L+EKL K EL K+D+P
Sbjct:   505 RQE-EAAWQLSRFYPMIEELIEKLSKGELPKEDFP 538

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

GO:0016192 "vesicle-mediated transport" evidence=IEA;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0019898 "extrinsic to membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0000910 "cytokinesis" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2025482 SEC1A "secretory 1A" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 5.3e-29, P = 5.3e-29
 Identities = 76/152 (50%), Positives = 95/152 (62%)

Query:    21 KINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEK 80
             KINRIIR+TGLR+LGQLEQDLVF DA  KDVI  L   +D   +NKLRLLMI A++YPEK
Sbjct:   381 KINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINFLRTNQDTNPENKLRLLMIYATVYPEK 440

Query:    81 FEGEKGLNLMKLAKLTADDMTAVNNMRLFXXXXXXXXXXXXXXX---------TARKDRS 131
             FEG+KG+ LM+LA+L+  DM  ++NM+L                           RKDRS
Sbjct:   441 FEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPENKAKSGSFSLKFDAGKTKQANRKDRS 500

Query:   132 GGEEICKYPRSLKIWHKLVEKLGKNELSKDDY 163
             G EE  +  R   +  +L+EKL K +LSK DY
Sbjct:   501 GEEETWQLFRFYPMIEELLEKLVKGDLSKSDY 532

GO:0005634 "nucleus" evidence=ISM

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

GO:0016192 "vesicle-mediated transport" evidence=IEA

TAIR|locus:2118126 SEC1B [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 75/154 (48%), Positives = 92/154 (59%)

Query:    22 INRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKF 81
             INR I E GLR+LGQLEQDLVF DA  KDVIK L+    ++ ++KLRL+MI A+IYP+KF
Sbjct:   388 INRTIMEQGLRDLGQLEQDLVFGDAGRKDVIKFLSTNHIISHESKLRLIMIVAAIYPKKF 447

Query:    82 EGEKGLNLMKLAKLTADDMTAVNNMRLFXXXXXXXXXXXXXXX-----------TARKDR 130
             EGEKG  +M+LAKL+ DD+ AVNNMRL                            AR+DR
Sbjct:   448 EGEKGRKMMELAKLSGDDVVAVNNMRLLGPVHTECKKSTTGSFPLKFDVLKTKRAARRDR 507

Query:   131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP 164
              G  +  +  R   I  +LVEKL K  L K DYP
Sbjct:   508 VGETQTWQLSRFYPIVEELVEKLSKGHLPKQDYP 541

GO:0005634 "nucleus" evidence=ISM

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0008565 "protein transporter activity" evidence=ISS

GO:0009306 "protein secretion" evidence=ISS

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0052542 "defense response by callose deposition" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_1270009 hypothetical protein (666 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	251
pfam00995	554	pfam00995, Sec1, Sec1 family	6e-23
COG5158	582	COG5158, SEC1, Proteins involved in synaptic trans	0.002

>gnl|CDD|216231 pfam00995, Sec1, Sec1 family

 Score = 96.9 bits (242), Expect = 6e-23
 Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 42/258 (16%)

Query: 6   TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKV--LTAKEDVTL 63
           +LH+        L +++ + I+E  L ++ +LEQDL       K    +  L     V L
Sbjct: 313 SLHLN-------LAEELMKQIKERKLDKVSELEQDLATGSDADKQKKDILELLNNPKVPL 365

Query: 64  DNKLRLLMI-AASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEK---KKSR 119
           ++KLRLL++ +     +  + E    L+  A +  + +  V N+   GG   +       
Sbjct: 366 EDKLRLLLLYSLRDGGKGKDLEDLRKLLLHAGIGPEALNLVKNLEQLGGLLSRTSGSNFS 425

Query: 120 RGKKRTARKDRSGGEEICK-----YPR-SLKIWHKLVEKLGKNELSKDDYPSHFAVINEA 173
             + +     +   + + K       R    +  +++E L K +L  D YP     +  A
Sbjct: 426 DLRDKLKLLVKEVSKSLPKGVKNVLSRYKPLL-KRILEDLIKGKLDTDSYPYFDPKLANA 484

Query: 174 PVA-HSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRI 232
                S+RS+R     + R                       Q I  FVVGG T SE R 
Sbjct: 485 SGPQGSLRSKRPTAAGQGRQP--------------------PQRIIVFVVGGVTYSEARA 524

Query: 233 CYKLTTELNG-EVVLGSS 249
            Y+L+ + NG  V++GS+
Sbjct: 525 LYELSKKTNGKRVIIGST 542

Length = 554

>gnl|CDD|227487 COG5158, SEC1, Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 48/252 (19%), Positives = 98/252 (38%), Gaps = 47/252 (18%)

Query: 17  ALHQKINRIIRETGLRELGQLEQDLV---FCDAEFKDVIKVLTAKEDVTLDNKLRLLMIA 73
            L  ++ +++ E  L +  ++EQ+L       ++  D+I++L +  +   D+KLRLL I 
Sbjct: 341 TLASELLKVVEERYLDDFSEIEQNLSTGNDVKSDISDLIELLESGVEE--DDKLRLL-IL 397

Query: 74  ASIYPEKFEGEKGLNLMKL---AKLTADDMTAVNNMRLFGG----SSEKKKSRRGKKRTA 126
            S+  +     K ++ ++L        + +     ++  G      S+    +RG K + 
Sbjct: 398 YSLTKDG--LIKDIDELRLLRIQGYGIEALNFFQRLKELGFLTLKDSKTISLKRGDKDSL 455

Query: 127 RKDRSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRT 186
            +  +       Y  S +  H+ V  L      ++ Y     +  + P+   +R      
Sbjct: 456 FQWFN------TYSLSRE--HQGVPDL------ENVYSGLIPLKKDIPIDLLVRRLFEPL 501

Query: 187 -------WARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTE 239
                      R      S+           ++I      FV+GG T  ELR+ Y+L   
Sbjct: 502 KSSQQQSLRLSRPKGRSRSNK------KIPQQRI----LVFVIGGVTYEELRVLYELNES 551

Query: 240 LNG-EVVLGSSK 250
            N   ++ GS++
Sbjct: 552 QNSVRIIYGSTE 563

Length = 582

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
KOG1300	593	consensus Vesicle trafficking protein Sec1 [Intrac	100.0
PF00995	564	Sec1: Sec1 family; InterPro: IPR001619 Sec1-like m	99.98
KOG1299	549	consensus Vacuolar sorting protein VPS45/Stt10 (Se	99.97
COG5158	582	SEC1 Proteins involved in synaptic transmission an	99.94
KOG1302	600	consensus Vacuolar sorting protein VPS33/slp1 (Sec	99.92
KOG1301	621	consensus Vesicle trafficking protein Sly1 (Sec1 f	99.92

>KOG1300 consensus Vesicle trafficking protein Sec1 [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.7e-42  Score=321.06  Aligned_cols=225  Identities=26%  Similarity=0.405  Sum_probs=187.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-CcchHH-------HHHHhhhCCCCChhhHHHHHHHHHHhCC
Q 040151            7 LHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAEFKD-------VIKVLTAKEDVTLDNKLRLLMIAASIYP   78 (251)
Q Consensus         7 ~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~~k~-------li~~L~~~~~~~~~dkLRLllLy~l~~~   78 (251)
                      +++..++.|++||++|++.++. +|.+++++|||||+| |+++++       ++..+. +++++..||+|++++|.+. .
T Consensus       338 k~~~Kls~Hl~LA~eC~~~~~~-~L~~l~~iEQDLa~G~Daeg~kik~~~~~~~p~l~-~~~~~~~dklR~Illy~~~-~  414 (593)
T KOG1300|consen  338 KELDKLSLHLELAEECMKKFQE-GLEKLGAIEQDLATGTDAEGEKIKDSLRDLLPILL-ESNVRLLDKLRLILLYIFE-R  414 (593)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCcccccHHHHHHhhhhhhc-ccCchHHHHHHHHHHHHHh-c
Confidence            5677899999999999999998 999999999999999 876543       334444 7899999999999999995 6


Q ss_pred             CCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCcccccCCCCCCccccccCccchHHHHHHHHhcCCC
Q 040151           79 EKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNEL  158 (251)
Q Consensus        79 ~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~~~~k~~~~~~~~y~~sr~~P~l~~ile~l~~~~l  158 (251)
                      +|..+.++.+|+++.+++.++++++.|+..+|.+..++....|...+.++++. .+.+|.+|||+|.|++|+|++++++|
T Consensus       415 ~Gi~ee~l~kL~~~~~i~~~~~~ii~~~~~~~~~~~~~~~~~k~~~~~rker~-~e~tyqlSR~~P~Ik~ilE~~i~~~L  493 (593)
T KOG1300|consen  415 KGIIEENLAKLLQHAGISVEEMQIIQNLHILGVPVTKDSFLLKFDPPERKERV-EEQTYQLSRWVPVIKNILEKLIEDRL  493 (593)
T ss_pred             CCccHHHHHHHhcccCCCchHHHHHhhHHHhCCccccCcccccCCCCcccccc-ccceeeeeeeehHHHHHHHHHHhccC
Confidence            89999999999999999999999999999999887655433344445577776 89999999999999999999999999


Q ss_pred             CCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHHHHHHh
Q 040151          159 SKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT  238 (251)
Q Consensus       159 ~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~~els~  238 (251)
                      ++++|||+..++.... .....|++++.|.+.+...              ...+.+||+|||||||+||+|+|++||+++
T Consensus       494 d~~~fp~~~~~s~~~~-~~~~~Sar~~~~~~~k~~~--------------~~~~~g~ri~VfIiGGvT~SEmRvaYevs~  558 (593)
T KOG1300|consen  494 DKKHFPYLNDTSETSS-GSAATSARYGHPLSNKTPS--------------AFKKPGQRIIVFIIGGVTFSEMRVAYEVSE  558 (593)
T ss_pred             ChhhCccccCCccccc-cCccccccccCcccccCcc--------------hhhccCceEEEEEeCCccHHHHHHHHHHHH
Confidence            9999999987763221 1122233445666655531              123579999999999999999999999999


Q ss_pred             hcCCeEEEccCC
Q 040151          239 ELNGEVVLGSSK  250 (251)
Q Consensus       239 ~~~~~IiiGsT~  250 (251)
                      +++++||||||+
T Consensus       559 ~~~~EViiGS~~  570 (593)
T KOG1300|consen  559 KLNREVIIGSDH  570 (593)
T ss_pred             hhCceEEECCcc
Confidence            999999999997

>PF00995 Sec1: Sec1 family; InterPro: IPR001619 Sec1-like molecules have been implicated in a variety of eukaryotic vesicle transport processes including neurotransmitter release by exocytosis []

Probab=99.98  E-value=8.1e-32  Score=258.35  Aligned_cols=224  Identities=22%  Similarity=0.338  Sum_probs=160.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc---hHHHHHHhhhCCCCChhhHHHHHHHHHHhCCCCC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE---FKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKF   81 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~---~k~li~~L~~~~~~~~~dkLRLllLy~l~~~~~~   81 (251)
                      .+++..+++|++|+++|++.+++++|.+++++||+|++| +.+   ...+.++|. +...+.+|||||+|||+++.  |+
T Consensus       308 ~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~~~~~~i~~~i~-~~~~~~~d~LRLl~L~sl~~--g~  384 (564)
T PF00995_consen  308 QEQQKSLSLHTNIAEEILKIIKKRNLDELIELEQDIASGEDSDGELLQYIEELIN-SRKISIEDKLRLLCLYSLTN--GI  384 (564)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHSCHTTSHB-SCHHHHHH-STTSTHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhCCccchhhHHHHHHHhh-ccCCCHHHHHHHHHHHHHHh--cC
Confidence            466788999999999999999999999999999999999 333   234888885 78899999999999999972  44


Q ss_pred             Ch---HHHHHHHHHcCCChhHHHHHHHHHHhcCCcccc----ccc-cCCCccc---c---cCCCCCCccccccCccchHH
Q 040151           82 EG---EKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKK----KSR-RGKKRTA---R---KDRSGGEEICKYPRSLKIWH  147 (251)
Q Consensus        82 ~~---~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~----~~~-~k~~~~~---~---k~~~~~~~~y~~sr~~P~l~  147 (251)
                      +.   +++++++..++++.+++.++.+|..+|....+.    ... .+..+..   .   ....+.+..|.++||+|+++
T Consensus       385 ~~~~~~~l~~~l~~~~~g~~~l~~l~~L~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~y~Pli~  464 (564)
T PF00995_consen  385 KGKDYDQLKKLLLQAGYGIEALQLLNNLEKLGLLKSKDNSSNFQSIRKKLNLISKFNDKNDKNNPKDISYVYSGYAPLIV  464 (564)
T ss_dssp             TCBHHHHHHHHHHHTT--HCHHHHHHHGGGGTHHCBSHTTS--CTTC-TT---HHTTCCCSSSSCSCCCSTTCT---HHH
T ss_pred             CcchHHHHHHHhhhcCCChHHHHHHHHHHHhcchhhccCccchhhhcccccccccccccccccccccccchhcccccHHH
Confidence            44   456778888888889999999999998776541    000 1111111   1   11135688999999999999


Q ss_pred             HHHHHHhcCCCC-CCCCCcccCcCCCCc-cccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCC
Q 040151          148 KLVEKLGKNELS-KDDYPSHFAVINEAP-VAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGA  225 (251)
Q Consensus       148 ~ile~l~~~~l~-~~~fp~~~~~~~~~~-~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGv  225 (251)
                      ++|+.+++++++ ++.||++++...... ...+++..+ +.|....                 ....+++++||||||||
T Consensus       465 rlve~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~~viVf~vGGv  526 (564)
T PF00995_consen  465 RLVEDLIKGKLDKEEEFPYLDPKPKNLNGSSFSLRSSK-PSRSKTQ-----------------PSNKPRKRVIVFFVGGV  526 (564)
T ss_dssp             HHHHHHHTTHSHHTTTSEBSSTCC-----SSSSSS-------------------------------S-SSEEEEEEETEB
T ss_pred             HHHHHHhhccCCcccccccccccccccCCCCccccccc-ccccccc-----------------cccCCCCEEEEEEEcCC
Confidence            999999999997 999999987752211 112222211 1111000                 01246899999999999


Q ss_pred             CHHHHHHHHHHHhhcC--CeEEEccCC
Q 040151          226 TSSELRICYKLTTELN--GEVVLGSSK  250 (251)
Q Consensus       226 Ty~E~r~~~els~~~~--~~IiiGsT~  250 (251)
                      ||+|++++++++++.+  ++|+||||+
T Consensus       527 Ty~Ei~~l~~l~~~~~~~~~iiigsT~  553 (564)
T PF00995_consen  527 TYSEIRALRELSKKLGPGKEIIIGSTS  553 (564)
T ss_dssp             EHHHHHHHHHHHTTSSSSSEEEEEESS
T ss_pred             cHHHHHHHHHHHHhhCCCcEEEEEeCC
Confidence            9999999999999988  999999996

They regulate vesicle transport by binding to a t-SNARE from the syntaxin family. This process is thought to prevent SNARE complex formation, a protein complex required for membrane fusion. Whereas Sec1 molecules are essential for neurotransmitter release and other secretory events, their interaction with syntaxin molecules seems to represent a negative regulatory step in secretion []. ; GO: 0006904 vesicle docking involved in exocytosis, 0016192 vesicle-mediated transport; PDB: 3C98_A 3PUJ_B 1FVH_A 1FVF_A 1EPU_A 2XHE_A 1MQS_A 2PJX_A 3PUK_A 1Y9J_A.

>KOG1299 consensus Vacuolar sorting protein VPS45/Stt10 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.3e-30  Score=235.46  Aligned_cols=195  Identities=25%  Similarity=0.333  Sum_probs=155.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccCCcc---hHHHHHHhhhCCCCChhhHHHHHHHHHHhCCCCCChHHHH
Q 040151           11 FVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAE---FKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEKGL   87 (251)
Q Consensus        11 ~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~gd~~---~k~li~~L~~~~~~~~~dkLRLllLy~l~~~~~~~~~~~~   87 (251)
                      +|++|+.+.+++++.++.++|.+++|+||+++|.+++   ..++.++|. +.+++..|++||++||+|+| +..+..++.
T Consensus       327 ~VsKHv~lvgEls~lv~~~nL~evSEvEQ~l~c~~~~~~~~~~i~~LL~-n~~vs~~d~lrLv~lYaLr~-e~~~~~~~~  404 (549)
T KOG1299|consen  327 NVSKHVALVGELSKLVQRRNLLEVSEVEQNLACNGDHGADFNDIKKLLQ-NEKVSEIDRLRLVALYALRY-ERHPPNELR  404 (549)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCcchhhHHHHHHHHc-CCcccHHHHHHHHHHHHHHh-ccCChHHHH
Confidence            5899999999999999999999999999999997443   457888886 89999999999999999999 677777776


Q ss_pred             HH---HHHcCCChhHHHHHHHHHHhcCCccccccccCCC------cccccCCCCCCccccccCccchHHHHHHHHhcCCC
Q 040151           88 NL---MKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKK------RTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNEL  158 (251)
Q Consensus        88 ~l---l~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~------~~~~k~~~~~~~~y~~sr~~P~l~~ile~l~~~~l  158 (251)
                      +|   |...|-  ..-.++.-|.++++...+.+......      +...|.-++.++.|.  ||.|+|+++++++.+|+|
T Consensus       405 ~L~~~l~~~~~--~~~~~v~~ll~~~G~~~R~~dlf~~~~~v~i~R~~~kglkgvENVyt--QH~P~lk~~l~~~~rgRl  480 (549)
T KOG1299|consen  405 QLPQILREQGP--KKPELVPFLLKYAGLHVRQGDLFGPNDLVPIARRFIKGLKGVENVYT--QHQPLLKSTLEDLFRGRL  480 (549)
T ss_pred             HHHHHHHhcCC--CcchhHHHHHHhcCcccccccccCcchhHHHHHHHhhccCcchhhhh--ccCHHHHHHHHHHHhccc
Confidence            65   444443  24577888888887765554221111      111222245677777  999999999999999999


Q ss_pred             CCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHHHHHHh
Q 040151          159 SKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTT  238 (251)
Q Consensus       159 ~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~~els~  238 (251)
                      ++-.||++.....                                       +.+++.||||||||+||+|+|.++++..
T Consensus       481 ~~~~~p~l~~~~s---------------------------------------~~~pq~IIVfivGGaTYEEa~~V~~~N~  521 (549)
T KOG1299|consen  481 KEIDYPFLGSQTS---------------------------------------RDRPQDIIVFIVGGATYEEARVVHELNA  521 (549)
T ss_pred             ccCCCcccccccc---------------------------------------cCCCceEEEEEECCccHHHHHHHHHHhc
Confidence            9888999974321                                       1379999999999999999999999997


Q ss_pred             h-cCCeEEEccCC
Q 040151          239 E-LNGEVVLGSSK  250 (251)
Q Consensus       239 ~-~~~~IiiGsT~  250 (251)
                      + .|++|++|||+
T Consensus       522 tn~g~rvvLgGtt  534 (549)
T KOG1299|consen  522 TNPGVRVVLGGTT  534 (549)
T ss_pred             CCCceEEEEcceE
Confidence            5 48999999985

>COG5158 SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]

Probab=99.94  E-value=4.6e-26  Score=214.86  Aligned_cols=215  Identities=22%  Similarity=0.306  Sum_probs=158.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccCCc---chHHHHHHhhhCCCCChhhHHHHHHHHHHhCCCCC-
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDA---EFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKF-   81 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~gd~---~~k~li~~L~~~~~~~~~dkLRLllLy~l~~~~~~-   81 (251)
                      +.+++.|.+|++|+++|++++++++|++++++||++.++..   +..|++..+. .... ..|||||+|||+|+. +++ 
T Consensus       330 ~~~~~~l~~H~~l~~e~l~~~~~~~l~~f~eIEq~l~~~~~~~~~i~Dli~~l~-~~~~-E~~klRllilysL~~-~~~~  406 (582)
T COG5158         330 QKRSRSLNKHLTLASELLKVVEERYLDDFSEIEQNLSTGNDVKSDISDLIELLE-SGVE-EDDKLRLLILYSLTK-DGLI  406 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhHHHHHHHHh-cCch-HHHHHHHHHHHHHhc-Ccch
Confidence            46788999999999999999999999999999999999842   2567888775 3333 337999999999975 563 


Q ss_pred             ChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccc----cCCC---------cccccC-CCCCCccccccCccchHH
Q 040151           82 EGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSR----RGKK---------RTARKD-RSGGEEICKYPRSLKIWH  147 (251)
Q Consensus        82 ~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~----~k~~---------~~~~k~-~~~~~~~y~~sr~~P~l~  147 (251)
                      ...+..+++...|++.++...++++..+|....+....    .+.+         .+..+. ....+..+++++|.|..+
T Consensus       407 ~~~~~~~~l~~~~~~~e~~~~~~~l~~~~~~~~~~~~~~s~~~g~~d~l~~~~n~y~~s~~~~~~~~~~~v~~~~iP~~k  486 (582)
T COG5158         407 KDIDELRLLRIQGYGIEALNFFQRLKELGFLTLKDSKTISLKRGDKDSLFQWFNTYSLSREHQGVPDLENVYSGLIPLKK  486 (582)
T ss_pred             hHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhhhhcccccccccCCcccccCcccccccccccCCCchHHHHHHhhcchhc
Confidence            44567788899999999999999999887664333211    0110         011111 123456667889999999


Q ss_pred             HHHHHHhcCCCCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCH
Q 040151          148 KLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATS  227 (251)
Q Consensus       148 ~ile~l~~~~l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy  227 (251)
                      ++...++.+++.+..++....         |.|..+ +.| +.+..                ...++++++|||+||+||
T Consensus       487 ~~~~~~~~~~~~~~~~s~~~~---------s~~~~~-~k~-~~~~~----------------~~~~~~~~~VfviGG~ty  539 (582)
T COG5158         487 DIPIDLLVRRLFEPLKSSQQQ---------SLRLSR-PKG-RSRSN----------------KKIPQQRILVFVIGGVTY  539 (582)
T ss_pred             ccchhhhhhhhcccccchhcc---------ceeecc-ccc-ccccc----------------cccccceEEEEEECCeeh
Confidence            999999999887766665541         222222 122 11111                013799999999999999


Q ss_pred             HHHHHHHHHHhhcC-CeEEEccCC
Q 040151          228 SELRICYKLTTELN-GEVVLGSSK  250 (251)
Q Consensus       228 ~E~r~~~els~~~~-~~IiiGsT~  250 (251)
                      +|+|++|+++.+.+ ++|++|||.
T Consensus       540 ~E~~~~~e~~~~~~~~~ii~Gst~  563 (582)
T COG5158         540 EELRVLYELNESQNSVRIIYGSTE  563 (582)
T ss_pred             HHHHHHHHHHhhcCCeeEEEcCCc
Confidence            99999999999887 999999996

>KOG1302 consensus Vacuolar sorting protein VPS33/slp1 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.92  E-value=4.8e-24  Score=199.06  Aligned_cols=220  Identities=17%  Similarity=0.210  Sum_probs=161.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc-hHHHHHHhhhCCCCChhhHHHHHHHHHHhCCCCCChH
Q 040151            7 LHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE-FKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGE   84 (251)
Q Consensus         7 ~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~-~k~li~~L~~~~~~~~~dkLRLllLy~l~~~~~~~~~   84 (251)
                      .+|+.+..|+++|+.+++++...++.+...+||++..| |.+ .-++|+.++ ....+....|||+||.+++. +|+.++
T Consensus       346 ~~~~~l~~H~~lae~i~~~v~~~~f~~~l~lE~ell~~~d~~k~~~~IeElI-~~~~~~~~vLRLicL~Slt~-~Gl~~k  423 (600)
T KOG1302|consen  346 QRKKSLERHTNLAEMIMQHVKNEDFRKLLKLEHELLEGNDSDKDFDYIEELI-YQEVPLNNVLRLICLLSLTC-NGLKPK  423 (600)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCcccchHHHHHHH-hhcccHHHHHHHHHHHHHHh-cCCCHH
Confidence            46777999999999999999999999999999999888 533 356777766 66899999999999999987 899998


Q ss_pred             HH----HHHHHHcCCChhHHHHHHHHHHhcCCcccccccc---C----------CCccccc----CCCCCCccccccCcc
Q 040151           85 KG----LNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRR---G----------KKRTARK----DRSGGEEICKYPRSL  143 (251)
Q Consensus        85 ~~----~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~---k----------~~~~~~k----~~~~~~~~y~~sr~~  143 (251)
                      ++    +.+++.+|.  +++-.++||++.|+-..+..+..   +          +..+..+    ...++|.+|+||+|.
T Consensus       424 ~l~~~rr~~lqsYG~--ehl~tl~nL~kaGLl~~q~~~~~~~~~~~~~~~st~~ntl~l~~~~~d~~~p~DiaYvySgy~  501 (600)
T KOG1302|consen  424 DLDHYRREYLQSYGY--EHLLTLQNLEKAGLLREQTGGRKLHTKSSKRNYSTWANTLPLVDEENDESNPSDIAYVYSGYA  501 (600)
T ss_pred             HHHHHHHHHHHhhhH--HHHHHHHHHHHcCCcccccCCCcchhhHHHHHHHHHHhcCCCcCCcccccCcccchhhhcccc
Confidence            86    467999998  89999999999997755443220   0          0011111    124789999999999


Q ss_pred             chHHHHHHHHhcCCCCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEc
Q 040151          144 KIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVG  223 (251)
Q Consensus       144 P~l~~ile~l~~~~l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvG  223 (251)
                      |++.+|++.+++.......|.-+...+..    . .   ....|....-         ..++..+   ...+.++|||+|
T Consensus       502 PLs~rlve~~l~~~~w~~~~~~i~~l~g~----~-~---e~~~~~~~~~---------~~~~~~~---g~~R~~lVff~G  561 (600)
T KOG1302|consen  502 PLSCRLVEDLLKRRGWQELYSKIRNLPGP----H-F---EEVTWTPSDI---------ASKNNSP---GALRVTLVFFLG  561 (600)
T ss_pred             cHHHHHHHHHhcccchhhhHHHHccCCCC----c-h---hhcccChhhh---------cccccCC---CCcceEEEEEEC
Confidence            99999999999985444444333322110    0 0   0001110000         0000000   147899999999


Q ss_pred             CCCHHHHHHHHHHHhhcCCeEEEccCC
Q 040151          224 GATSSELRICYKLTTELNGEVVLGSSK  250 (251)
Q Consensus       224 GvTy~E~r~~~els~~~~~~IiiGsT~  250 (251)
                      |+||+|+++++++++..|.+++|.+|+
T Consensus       562 G~T~~EIAalr~l~~~~~~~f~i~Tt~  588 (600)
T KOG1302|consen  562 GCTYAEIAALRFLAKLEGYRFLIATTG  588 (600)
T ss_pred             CccHHHHHHHHHHHhhcCceEEEEecc
Confidence            999999999999999999999999986

>KOG1301 consensus Vesicle trafficking protein Sly1 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.92  E-value=3.3e-24  Score=196.42  Aligned_cols=213  Identities=18%  Similarity=0.190  Sum_probs=147.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccCCcchHHHHHHhhhCCCCChhhHHHHHHHHHHhCCCCCChHH
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEK   85 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~gd~~~k~li~~L~~~~~~~~~dkLRLllLy~l~~~~~~~~~~   85 (251)
                      +++|+.+++|++||+++.+++++|.|+.+.++|++++++.- -+.+++.+.+....+++||||+++||.++. +-..+++
T Consensus       369 ~ekK~~ID~HtnIatalL~~IkeR~lD~ff~~E~~~~~~~l-~~~~l~~~~~~~~gt~EDkLR~~Ii~~ls~-et~~~s~  446 (621)
T KOG1301|consen  369 TEKKRLIDLHTNIATALLEQIKERKLDDFFEVEKKIMSTTL-DRSLLDILEDGEAGTPEDKLRLFIIYYLST-ETVPQSD  446 (621)
T ss_pred             HHhhhhHHHHHHHHHHHHHHHHHhhhhHHHHHhcccccccc-cHHHHHHHhcccCCChHHHHHHHHHHHHhh-ccccHHH
Confidence            68999999999999999999999999999999999987421 246677776446789999999999999976 5555766


Q ss_pred             HH---HHHHHcCCChhHHHHHHHHHHhcCCcc--ccccccCCCcc-----cccC-C----CCCCccccccCccchHHHHH
Q 040151           86 GL---NLMKLAKLTADDMTAVNNMRLFGGSSE--KKKSRRGKKRT-----ARKD-R----SGGEEICKYPRSLKIWHKLV  150 (251)
Q Consensus        86 ~~---~ll~~~gl~~~~~~~l~~l~~lg~~~~--~~~~~~k~~~~-----~~k~-~----~~~~~~y~~sr~~P~l~~il  150 (251)
                      ++   ..++.+|++.+.++.+++|+.+.....  ...+....+..     ...+ .    .+.-+-..--+..| +.+|+
T Consensus       447 le~~e~al~e~~~d~~Al~yvkr~k~~~~~~s~~~~~~~~~t~~~~~~~kl~~qg~~~vm~GVKNLlp~~q~lP-vT~iv  525 (621)
T KOG1301|consen  447 LEAVENALTEAGCDLNALKYVKRLKEITKMSSATSAYSGTTTKIVDLFEKLYSQGSSFVMEGVKNLLPKKQNLP-VTRIV  525 (621)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHhhcccccccccCCcccHHHHHHHHhhccHHHHHhhHHhcCcccccCc-HHHHH
Confidence            65   458889998888888888776532211  11111111100     0000 0    00000011113344 68999


Q ss_pred             HHHhcCCC--CCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHH
Q 040151          151 EKLGKNEL--SKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSS  228 (251)
Q Consensus       151 e~l~~~~l--~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~  228 (251)
                      |.++.++-  ..++|.|++|+....  +.+.+.        .+                   ..+.++.|||||||.+|-
T Consensus       526 eal~~~~sn~etddYl~~DPk~~k~--~~~~~~--------~~-------------------r~~f~eaIVFvVGGGNYi  576 (621)
T KOG1301|consen  526 EALMDPKSNPETDDYLYFDPKLSKG--GSSSLP--------IK-------------------RQPFQEAIVFVVGGGNYI  576 (621)
T ss_pred             HHhhCCCCCccccceEeeccccccC--CCcccc--------cc-------------------ccchhheEEEEEcCcCee
Confidence            99998875  357799999885431  111110        01                   126999999999999999


Q ss_pred             HHHHHHHHHhhc--CCeEEEccCC
Q 040151          229 ELRICYKLTTEL--NGEVVLGSSK  250 (251)
Q Consensus       229 E~r~~~els~~~--~~~IiiGsT~  250 (251)
                      |+.++.+|+++.  .++||||+|.
T Consensus       577 EYqnL~d~~krq~~~krIiYGsTe  600 (621)
T KOG1301|consen  577 EYQNLVDLAKRQQTVKRIIYGSTE  600 (621)
T ss_pred             ehhhHHHHHHhhcccceeEecchh
Confidence            999999999864  3899999995

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	251
2xhe_A	650	UNC18; exocytosis, exocytosis complex, snare, neur	1e-22
1dn1_A	594	NSEC1, syntaxin binding protein 1; protein-protein	6e-19
1epu_A	591	S-SEC1; parallel beta-sheets, LEFT-hand turn conne	5e-17
3puk_A	592	Syntaxin-binding protein 3; membrane trafficking,	4e-15
1mqs_A	671	SLY1 protein, SLY1P; SM-protein, snare, syntaxin,	8e-15

>2xhe_A UNC18; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis} Length = 650

 Score = 95.4 bits (236), Expect = 1e-22
 Identities = 43/257 (16%), Positives = 96/257 (37%), Gaps = 29/257 (11%)

Query: 18  LHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIK-------VLTAKEDVTLDNKLRLL 70
           +   IN     + +    + EQ++V  + +  + ++        +     V+ ++KLR L
Sbjct: 350 MSNAINMAF-SSTIDSCTKAEQNIVTEEEQDGNKVRDFIGEVASVVVDRRVSTEDKLRCL 408

Query: 71  MIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDR 130
           M+   +        +  NL+  A +     +A+ N+ + G +    +  R  K   R +R
Sbjct: 409 MLC-VLAKNGTSSHELNNLLDNANIATPSRSAIYNLEMLGATVVADRRGRKPKTMKRIER 467

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYP------------SHFAVINEAPVAHS 178
                + ++   +K    L+E +   +L  + YP                 + E     +
Sbjct: 468 DMPYVLSRWTPIVK---DLMEYIATGQLDLESYPAVRDGPSVVQPKRASKSVEEDDDGPA 524

Query: 179 MRSRRTRTWARPRSSDDGCSSDSVLK-----HALSGFEKIGQCIFEFVVGGATSSELRIC 233
             +R+   WA+ + ++    S           A    E     +F F+ G  + +E+R  
Sbjct: 525 TSARKRGNWAKNKGNNRSLPSTPSGVAVSGNGAAGAAESAKPKLFVFINGTVSYNEIRCA 584

Query: 234 YKLTTELNGEVVLGSSK 250
           Y+++     EV +G+  
Sbjct: 585 YEVSQSSGYEVYIGAHN 601

>1dn1_A NSEC1, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} SCOP: e.25.1.1 PDB: 3puj_A 3c98_A Length = 594

 Score = 84.6 bits (208), Expect = 6e-19
 Identities = 43/239 (17%), Positives = 98/239 (41%), Gaps = 27/239 (11%)

Query: 20  QKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAK-------EDVTLDNKLRLLMI 72
           +   +   +  + +L ++EQDL        + IK             +V+  +K+R++++
Sbjct: 352 EDCMKHY-QGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVSTYDKIRIILL 410

Query: 73  AASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSG 132
              +     E      L++ A++  +D   + NM   G       + R + +  RK+R  
Sbjct: 411 YIFLKNGITEENL-NKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKERIS 469

Query: 133 GEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRS 192
            +   +  R   I   ++E   +++L    YP + +  + A  + +  S R   W + ++
Sbjct: 470 EQTY-QLSRWTPIIKDIMEDTIEDKLDTKHYP-YISTRSSASFSTTAVSARYGHWHKNKA 527

Query: 193 SDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG-EVVLGSSK 250
             +                + G  +  F++GG + +E+R  Y++T      EV++GS+ 
Sbjct: 528 PGE---------------YRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTH 571

>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical BUN endocytosis-exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A Length = 591

 Score = 79.2 bits (194), Expect = 5e-17
 Identities = 46/246 (18%), Positives = 95/246 (38%), Gaps = 32/246 (13%)

Query: 18  LHQKINRIIRETGLRELGQLEQDLVFCDAE--------FKDVIKVLTAKEDVTLDNKLRL 69
           L +   +  ++  + +L ++EQDL               ++++ +L  +  ++  +K+R+
Sbjct: 348 LAEDCMKQYQQH-VDKLCKVEQDLAMGTDADGEKIRDHMRNIVPILLDQ-KISAYDKIRI 405

Query: 70  LMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRG---KKRTA 126
           +++   I+      E    L++ A + A++   +N+M+  G    +   RR       T 
Sbjct: 406 ILLY-IIHKGGISEENLAKLVQHAHIPAEEKWIINDMQNLGVPIIQDGGRRKIPQPYHTH 464

Query: 127 RKDRSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRT 186
            +     +   +  R       ++E   +++L    YP         P      S R   
Sbjct: 465 NRKERQADHTYQMSRWTPYMKDIMEAAVEDKLDTRHYP-FLNGGGPRPSCQQPVSVRYGH 523

Query: 187 WARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG--EV 244
           W + +                    K G  +  FVVGG + SE+R  Y++T       EV
Sbjct: 524 WHKDKGQASY---------------KSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEV 568

Query: 245 VLGSSK 250
           +LGS+ 
Sbjct: 569 ILGSTH 574

>3puk_A Syntaxin-binding protein 3; membrane trafficking, SM protein, snare proteins, binding protein, endocytosis-exocytosis complex; 3.05A {Mus musculus} PDB: 2pjx_A Length = 592

 Score = 73.4 bits (179), Expect = 4e-15
 Identities = 47/241 (19%), Positives = 85/241 (35%), Gaps = 32/241 (13%)

Query: 18  LHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAK-------EDVTLDNKLRLL 70
           L +      +   + +L + EQDL          +K            ++    +K+R +
Sbjct: 350 LAEDCMNKFKL-NIEKLCKTEQDLALGTDAEGQRVKDSMLVLLPVLLNKNHDNCDKIRAV 408

Query: 71  MIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDR 130
           ++           E    L+   K+  DD   + N    G           + +  RKDR
Sbjct: 409 LLYIFGI-NGTTEENLDRLIHNVKI-EDDSDMIRNWSHLGVPIVPPSQ---QAKPLRKDR 463

Query: 131 SGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARP 190
           S  EE  +  R       ++E    N L   ++P      +  P   ++ +      AR 
Sbjct: 464 SA-EETFQLSRWTPFIKDIMEDAIDNRLDSKEWP----YCSRCP---AVWNGSGAVSARQ 515

Query: 191 RSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG-EVVLGSS 249
           +   +    D           K G  +  FV+GG T SE+R  Y+++      EV++GS+
Sbjct: 516 KPRTNYLELDR----------KNGSRLIIFVIGGITYSEMRCAYEVSQAHKSCEVIIGST 565

Query: 250 K 250
            
Sbjct: 566 H 566

>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1 Length = 671

 Score = 72.8 bits (177), Expect = 8e-15
 Identities = 32/247 (12%), Positives = 65/247 (26%), Gaps = 21/247 (8%)

Query: 18  LHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIY 77
           +   +   +    L    ++EQD           + +L   +   L++KLR  ++     
Sbjct: 408 IFAALLSQLESKSLDTFFEVEQDPG-STKTRSRFLDILKDGKTNNLEDKLRSFIVLYLTS 466

Query: 78  PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEIC 137
                 +   N+    K    D+ A+  +       +        K       S  +   
Sbjct: 467 TTGLPKDFVQNVENYFKENDYDINALKYVYKLREFMQLSNMSLQNKSLEDGSDSAFKPSN 526

Query: 138 KYPRSLKIW---------HKLVEKLGKNELSKDDYP--SHFAVINEAPVAHSMRSRRTRT 186
                +              L+  + K    K   P  +    I +   +       T +
Sbjct: 527 LTLSGIYGLTEGKLQGGVGSLISGIKKLLPEKKTIPITNVVDAIMDPLNSSQKNLETTDS 586

Query: 187 WARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTEL---NGE 243
           +          S      H      +       FVVGG    E +   +          +
Sbjct: 587 YLYIDPKITRGS------HTRKPKRQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKK 640

Query: 244 VVLGSSK 250
           V+ GS+ 
Sbjct: 641 VMYGSTA 647

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	251
1dn1_A	594	NSEC1, syntaxin binding protein 1; protein-protein	100.0
3puk_A	592	Syntaxin-binding protein 3; membrane trafficking,	100.0
1epu_A	591	S-SEC1; parallel beta-sheets, LEFT-hand turn conne	100.0
2xhe_A	650	UNC18; exocytosis, exocytosis complex, snare, neur	100.0
3c98_A	606	Syntaxin-binding protein 1; protein complex, alter	100.0
1mqs_A	671	SLY1 protein, SLY1P; SM-protein, snare, syntaxin,	99.97

>1dn1_A NSEC1, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3puj_A 3c98_A

Probab=100.00  E-value=9.7e-45  Score=348.35  Aligned_cols=225  Identities=20%  Similarity=0.350  Sum_probs=173.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc-------hHHHHHHhhhCCCCChhhHHHHHHHHHHhC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE-------FKDVIKVLTAKEDVTLDNKLRLLMIAASIY   77 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~-------~k~li~~L~~~~~~~~~dkLRLllLy~l~~   77 (251)
                      ++++..+++|++||++|++.+++ +|++++++||+|++| |.+       .+.+.++|. ++.++++|||||+|||+|++
T Consensus       338 ~~~~~~l~~H~~ia~~l~~~~~~-~l~~~~e~EQ~l~~g~d~~~~~~k~~~~~i~~lL~-~~~~~~~dkLRL~~Ly~l~~  415 (594)
T 1dn1_A          338 QKELSKYSTHLHLAEDCMKHYQG-TVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILL-DANVSTYDKIRIILLYIFLK  415 (594)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHSBCSSCCBCCCTHHHHHHHHH-CTTSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCcccchhHHHHHHHHHHHh-CCCCChHhHHHHHHHHHHHc
Confidence            46788899999999999999997 899999999999999 543       235667876 88999999999999999976


Q ss_pred             CCCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCcccccCCCCCCccccccCccchHHHHHHHHhcCC
Q 040151           78 PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNE  157 (251)
Q Consensus        78 ~~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~~~~k~~~~~~~~y~~sr~~P~l~~ile~l~~~~  157 (251)
                       +|+.++++.+|++++|++.+++.+++||..+|+...+.....|.+.+.++.+ +.++.|++|||.|.|+++++++++|+
T Consensus       416 -~g~~~~~~~~L~~~~~~~~~~~~~i~nl~~lG~~~~~~~~~~k~~~~~~k~~-~~e~~Y~lsr~~P~l~~ile~~~~~~  493 (594)
T 1dn1_A          416 -NGITEENLNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKER-ISEQTYQLSRWTPIIKDIMEDTIEDK  493 (594)
T ss_dssp             -TCBCHHHHHHHHHHHTCCHHHHHHHHHGGGGTCCCBCCCGGGCCCCCCCCCC-CCSCCCTTCCCCCHHHHHHHHHHTTC
T ss_pred             -CCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhCCccccccccccccccccccC-CCCccceeeccchHHHHHHHHHHhCC
Confidence             8999999999999999999999999999999987654432223233344443 57999999999999999999999999


Q ss_pred             CCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHHHHHH
Q 040151          158 LSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLT  237 (251)
Q Consensus       158 l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~~els  237 (251)
                      |++++|||+.++++... ..+.++.|+++|++.+++.+               ...++|+|||||||+||+|+|++|+++
T Consensus       494 L~~~~fP~~~~~~~~~~-~~~~~s~r~~~w~~~~~~~~---------------~~~~~riivFivGG~Ty~E~r~~~els  557 (594)
T 1dn1_A          494 LDTKHYPYISTRSSASF-STTAVSARYGHWHKNKAPGE---------------YRSGPRLIIFILGGVSLNEMRCAYEVT  557 (594)
T ss_dssp             SCTTTSCCSSCC------------------------------------------CCCCEEEEEEETCEEHHHHHHHHHHH
T ss_pred             CCcccCCccCCCCCccc-cccccccccccccccCCccc---------------cccCCcEEEEEeCCccHHHHHHHHHHH
Confidence            99999999976643211 11122344478987664321               136899999999999999999999999


Q ss_pred             hhc-CCeEEEccCC
Q 040151          238 TEL-NGEVVLGSSK  250 (251)
Q Consensus       238 ~~~-~~~IiiGsT~  250 (251)
                      ++. +++||||||+
T Consensus       558 ~~~~~~~VilG~t~  571 (594)
T 1dn1_A          558 QANGKWEVLIGSTH  571 (594)
T ss_dssp             HHHSSCEEEEEESS
T ss_pred             hhcCCceEEEeeCC
Confidence            986 4899999997

>3puk_A Syntaxin-binding protein 3; membrane trafficking, SM protein, snare proteins, binding protein, endocytosis-exocytosis complex; 3.05A {Mus musculus} PDB: 2pjx_A

Probab=100.00  E-value=3.4e-43  Score=337.54  Aligned_cols=220  Identities=21%  Similarity=0.242  Sum_probs=170.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc---hH----HHHHHhhhCCCCChhhHHHHHHHHHHhC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE---FK----DVIKVLTAKEDVTLDNKLRLLMIAASIY   77 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~---~k----~li~~L~~~~~~~~~dkLRLllLy~l~~   77 (251)
                      ++++..+++|++||++|++.+++ +|++++++||+|++| |.+   .|    .++++|. ++.++++|||||+|||+|++
T Consensus       338 ~~~~~~l~~H~~ia~~l~~~~~~-~l~~~~e~EQ~l~~g~d~~~~~~k~~~~~i~~~L~-~~~~~~~dkLRL~lLy~L~~  415 (592)
T 3puk_A          338 RKQISKQVVHLNLAEDCMNKFKL-NIEKLCKTEQDLALGTDAEGQRVKDSMLVLLPVLL-NKNHDNCDKIRAVLLYIFGI  415 (592)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHH-THHHHHHHHHHHHSSSCTTCCSCSCCHHHHTTTTT-SCSCCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHc
Confidence            46788899999999999999997 899999999999999 543   23    4456675 88899999999999999987


Q ss_pred             CCCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCcccccCCCCCCccccccCccchHHHHHHHHhcCC
Q 040151           78 PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNE  157 (251)
Q Consensus        78 ~~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~~~~k~~~~~~~~y~~sr~~P~l~~ile~l~~~~  157 (251)
                       +|+.++++.+|++++|++. ++.+|.||..+|....+..   +...+.+|. .+.++.|++|||+|+++++++++++|+
T Consensus       416 -~g~~~~~~~~Ll~~~g~~~-~~~~i~nl~~lg~~~~~~~---~~~~~~rk~-~~~e~~Y~~Sr~~P~l~~ile~~~~g~  489 (592)
T 3puk_A          416 -NGTTEENLDRLIHNVKIED-DSDMIRNWSHLGVPIVPPS---QQAKPLRKD-RSAEETFQLSRWTPFIKDIMEDAIDNR  489 (592)
T ss_dssp             -CBCCHHHHHHHHHHTCCCT-TTHHHHGGGGGTCCSSSSB---SSCCCCCCC-CCCCCGGGSCCCCCTTHHHHHHHHTCC
T ss_pred             -CCCCHHHHHHHHHHcCCCh-HHHHHHHHHHhCCccccCc---cccCccccc-CCCCcceeeeccchHHHHHHHHHHhCC
Confidence             8999999999999999987 8999999999998765442   222334444 357999999999999999999999999


Q ss_pred             CCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHHHHHH
Q 040151          158 LSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLT  237 (251)
Q Consensus       158 l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~~els  237 (251)
                      |+++.|||+.+++..+. ..+.++.|.|.| +.+++.               ...+++++|||||||+||+|+|++|+++
T Consensus       490 L~~~~fP~~~~~~~~~~-~~~~~s~r~~~w-~~~~~~---------------~~~~~~riiVFivGGvTysE~r~~~els  552 (592)
T 3puk_A          490 LDSKEWPYCSRCPAVWN-GSGAVSARQKPR-TNYLEL---------------DRKNGSRLIIFVIGGITYSEMRCAYEVS  552 (592)
T ss_dssp             CCTTTSCC---------------------C-CCCCCC---------------CCSCCSEEEEEEETCEEHHHHHHHHHHH
T ss_pred             CCcccCCccCCCCCCcc-CCcccccccccc-ccCccc---------------cccCCCeEEEEEeCCcCHHHHHHHHHHH
Confidence            99999999987643211 011123344788 544321               1236899999999999999999999999


Q ss_pred             hhcC-CeEEEccCC
Q 040151          238 TELN-GEVVLGSSK  250 (251)
Q Consensus       238 ~~~~-~~IiiGsT~  250 (251)
                      ++.+ ++||||||+
T Consensus       553 ~~~~~~~vilG~T~  566 (592)
T 3puk_A          553 QAHKSCEVIIGSTH  566 (592)
T ss_dssp             HHCCSSEEEEEESS
T ss_pred             hhcCCceEEEeeCC
Confidence            9875 899999997

>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical BUN endocytosis-exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A

Probab=100.00  E-value=1.4e-40  Score=319.74  Aligned_cols=225  Identities=21%  Similarity=0.331  Sum_probs=170.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc-------hHHHHHHhhhCCCCChhhHHHHHHHHHHhC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE-------FKDVIKVLTAKEDVTLDNKLRLLMIAASIY   77 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~-------~k~li~~L~~~~~~~~~dkLRLllLy~l~~   77 (251)
                      ++++..+++|++||++|++.+++ +|++++++||+|++| |.+       .+.++++|. ++..+++|||||+|||++++
T Consensus       336 ~~~~~~l~~H~~ia~~l~~~i~~-~l~~~~~~EQ~l~~g~d~~g~~~k~~~~~i~~~l~-~~~~~~~dkLRLl~Ly~l~~  413 (591)
T 1epu_A          336 QKELSKYSTHLHLAEDCMKQYQQ-HVDKLCKVEQDLAMGTDADGEKIRDHMRNIVPILL-DQKISAYDKIRIILLYIIHK  413 (591)
T ss_dssp             HHHHTTSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHSBCTTSCBCCCCHHHHHHHHT-CTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCccccccchHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHc
Confidence            35677899999999999999999 999999999999999 543       235778886 88899999999999999988


Q ss_pred             CCCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCcc----cccCCCCCCccccccCccchHHHHHHHH
Q 040151           78 PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRT----ARKDRSGGEEICKYPRSLKIWHKLVEKL  153 (251)
Q Consensus        78 ~~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~~----~~k~~~~~~~~y~~sr~~P~l~~ile~l  153 (251)
                       +|++++++.++++.+|++.+++.++.||..+|+...+.....+....    .++. .+.+..|+++||+|++++|+|++
T Consensus       414 -~g~~~~~l~~ll~~~g~~~~~~~~i~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~s~~~Pl~~~ive~l  491 (591)
T 1epu_A          414 -GGISEENLAKLVQHAHIPAEEKWIINDMQNLGVPIIQDGGRRKIPQPYHTHNRKE-RQADHTYQMSRWTPYMKDIMEAA  491 (591)
T ss_dssp             -TCBCHHHHHHHHHHTTCCHHHHHHHHHGGGGTCCCBSCTTSCCCCCTTSGGGSCC-CCSCCSCGGGCCCCHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHhcCCCHHHHHHHHHHHHcCCccccCCcccccccccccccccc-CCCCccccccccchhHHHHHHHH
Confidence             79999999999999999999999999999999776544222122111    1222 34677899999999999999999


Q ss_pred             hcCCCCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHH
Q 040151          154 GKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRIC  233 (251)
Q Consensus       154 ~~~~l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~  233 (251)
                      ++++++++.|||++++.+... ....++.++++|++.+++..               ...++++|||||||+||+|++++
T Consensus       492 ~~~~l~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~---------------~~~~~~viVF~vGG~Ty~E~~~l  555 (591)
T 1epu_A          492 VEDKLDTRHYPFLNGGGPRPS-CQQPVSVRYGHWHKDKGQAS---------------YKSGPRLIIFVVGGISYSEMRSA  555 (591)
T ss_dssp             HTTCSCTTTSCBTTSCC-----------------------------------------CCCCEEEEEEETCBCHHHHHHH
T ss_pred             hcCCCCcccCcccCCCCCccc-cCCccccccCcccCCCCccc---------------cCCCCeEEEEEECCCCHHHHHHH
Confidence            999999999999987543211 11112334467876544311               12467799999999999999999


Q ss_pred             HHHHh--hcCCeEEEccCC
Q 040151          234 YKLTT--ELNGEVVLGSSK  250 (251)
Q Consensus       234 ~els~--~~~~~IiiGsT~  250 (251)
                      |+|++  ..+++||||||+
T Consensus       556 ~~l~~~~~~~~~viigsT~  574 (591)
T 1epu_A          556 YEVTQTAKNNWEVILGSTH  574 (591)
T ss_dssp             HHHHTSSCSSCEEEEEESS
T ss_pred             HHHHhhccCCCeEEEecCC
Confidence            99998  568999999997

>2xhe_A UNC18; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}

Probab=100.00  E-value=6.1e-40  Score=318.39  Aligned_cols=239  Identities=18%  Similarity=0.271  Sum_probs=171.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc-------hHHHHHHhhhCCCCChhhHHHHHHHHHHhC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE-------FKDVIKVLTAKEDVTLDNKLRLLMIAASIY   77 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~-------~k~li~~L~~~~~~~~~dkLRLllLy~l~~   77 (251)
                      ++++..+++|++||++|++.+++ +|++++++||+|++| |.+       .+++.++|. ++..+.+|||||+|||++++
T Consensus       338 ~~~~~~l~~H~~ia~~l~~~i~~-~l~~~~~~EQ~l~~g~d~~g~~~~~~~~~i~~ll~-~~~~~~~dkLRLl~Ly~l~~  415 (650)
T 2xhe_A          338 REQMQKYSLHLDMSNAINMAFSS-TIDSCTKAEQNIVTEEEQDGNKVRDFIGEVASVVV-DRRVSTEDKLRCLMLCVLAK  415 (650)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHSBCSSCCBCCCHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCcccccchhHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHh
Confidence            46788899999999999999999 999999999999999 542       245777876 78899999999999999998


Q ss_pred             CCCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCcccccCCCCCCccccccCccchHHHHHHHHhcCC
Q 040151           78 PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNE  157 (251)
Q Consensus        78 ~~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~~~~k~~~~~~~~y~~sr~~P~l~~ile~l~~~~  157 (251)
                       +|+++++++++++.+|++.+++.+|+||+.+|+...+..+..+.+...++.   .+..|+++||+|++++|||++++++
T Consensus       416 -~g~~~~~l~~ll~~~G~~~~~~~~i~nL~~lgl~~~~~~~~~~~~~~~rk~---~~~~yv~s~y~Pl~~rlve~l~~~~  491 (650)
T 2xhe_A          416 -NGTSSHELNNLLDNANIATPSRSAIYNLEMLGATVVADRRGRKPKTMKRIE---RDMPYVLSRWTPIVKDLMEYIATGQ  491 (650)
T ss_dssp             -TCBCHHHHHHHHHHTTCCGGGGHHHHGGGGGTCCCBGGGCCCCCCCCCCCC---CCCCSTTCCCCCHHHHHHHHHTTTC
T ss_pred             -CCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhCCcccccccccccccccccc---cCCcceeccchHHHHHHHHHHhcCC
Confidence             799999999999999999999999999999998765442222222222332   2338999999999999999999999


Q ss_pred             CCCCCCCcccCcCCC-C-----------ccccCCCcccccccccCCCCCCC----CCchhhhhhhc-ccccCCCceEEEE
Q 040151          158 LSKDDYPSHFAVINE-A-----------PVAHSMRSRRTRTWARPRSSDDG----CSSDSVLKHAL-SGFEKIGQCIFEF  220 (251)
Q Consensus       158 l~~~~fp~~~~~~~~-~-----------~~~~s~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~iIVF  220 (251)
                      |+++.|||++++.+. .           .+..+.++.+.++|++.+.+...    +++.+..+... .....+++++|||
T Consensus       492 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~w~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~viVF  571 (650)
T 2xhe_A          492 LDLESYPAVRDGPSVVQPKRASKSVEEDDDGPATSARKRGNWAKNKGNNRSLPSTPSGVAVSGNGAAGAAESAKPKLFVF  571 (650)
T ss_dssp             SCTTTSCBSSCGGGSCCCC---------------------------------------------------CCCSCEEEEE
T ss_pred             CCcccCceeCCCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCEEEEE
Confidence            999999999765322 0           00111123344789876543221    11111110000 0012457889999


Q ss_pred             EEcCCCHHHHHHHHHHHhhcCCeEEEccCC
Q 040151          221 VVGGATSSELRICYKLTTELNGEVVLGSSK  250 (251)
Q Consensus       221 vvGGvTy~E~r~~~els~~~~~~IiiGsT~  250 (251)
                      ||||+||+|+|++|+|+++.+++||||||+
T Consensus       572 ~iGGvTysEi~al~~ls~~~~~~viigsT~  601 (650)
T 2xhe_A          572 INGTVSYNEIRCAYEVSQSSGYEVYIGAHN  601 (650)
T ss_dssp             EEEEECHHHHHHHHHHHTTSSSEEEEEEEE
T ss_pred             EECCCCHHHHHHHHHHHhcCCCEEEEeeCC
Confidence            999999999999999998889999999996

>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A

Probab=100.00  E-value=4.7e-39  Score=310.07  Aligned_cols=225  Identities=20%  Similarity=0.346  Sum_probs=171.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc-------hHHHHHHhhhCCCCChhhHHHHHHHHHHhC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE-------FKDVIKVLTAKEDVTLDNKLRLLMIAASIY   77 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~-------~k~li~~L~~~~~~~~~dkLRLllLy~l~~   77 (251)
                      .+++..+++|++|+++|++.++ ++|++++++||+|+|| |.+       .+.++++|. ++.++++|||||+|||++++
T Consensus       350 ~~~~~~l~~H~~ia~~l~~~~~-~~l~~~~e~EQ~l~~~~d~~~~~~~~~~~~i~~ll~-~~~~~~~dkLRL~lLy~l~~  427 (606)
T 3c98_A          350 QKELSKYSTHLHLAEDCMKHYQ-GTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILL-DANVSTYDKIRIILLYIFLK  427 (606)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHSBCTTSCBCSCTHHHHHHHHT-CTTSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHh
Confidence            4678889999999999999996 6899999999999998 543       346888886 88999999999999999988


Q ss_pred             CCCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCcccccCCCCCCccccccCccchHHHHHHHHhcCC
Q 040151           78 PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNE  157 (251)
Q Consensus        78 ~~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~~~~k~~~~~~~~y~~sr~~P~l~~ile~l~~~~  157 (251)
                       +|+.++++.++++.++++..++.++.||..+|....+.....+...+.++. ...+..|.++||+|+++++++++++++
T Consensus       428 -~g~~~~~l~~~~~~~~~~~~~~~~i~~l~~lg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~Pll~~lle~l~k~~  505 (606)
T 3c98_A          428 -NGITEENLNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKE-RISEQTYQLSRWTPIIKDIMEDTIEDK  505 (606)
T ss_dssp             -TSBCHHHHHHHHHHHTCCHHHHHHHHHGGGGTCCCBCCCTTTCCCCCCCCC-CCCCCCCTTCCCCCHHHHHHHHHHTTC
T ss_pred             -cCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhCCccccccccccccchhhcc-CCcccccceecchHHHHHHHHHHHhCC
Confidence             899999999999999999999999999999998765443222222222322 346788999999999999999999999


Q ss_pred             CCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHHHHHH
Q 040151          158 LSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLT  237 (251)
Q Consensus       158 l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~~els  237 (251)
                      |+++.|||+.+......+.... +.+.+.|++.+.++.               ..+++++|||||||+||+|+|++|+++
T Consensus       506 L~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------------~~~~~~iIVFvvGGvTy~E~~~l~~ls  569 (606)
T 3c98_A          506 LDTKHYPYISTRSSASFSTTAV-SARYGHWHKNKAPGE---------------YRSGPRLIIFILGGVSLNEMRCAYEVT  569 (606)
T ss_dssp             SCTTTSCCSSCC------------------------------------------CCCSEEEEEEETCEEHHHHHHHHHHH
T ss_pred             CCcccCcccCCCCccccccccc-ccccCCccccCCCCC---------------CCCCCEEEEEEECCcCHHHHHHHHHHH
Confidence            9999999998765432211111 223366776655421               246889999999999999999999999


Q ss_pred             hhc-CCeEEEccCC
Q 040151          238 TEL-NGEVVLGSSK  250 (251)
Q Consensus       238 ~~~-~~~IiiGsT~  250 (251)
                      ++. +++||||||+
T Consensus       570 ~~~~~~~viiGsT~  583 (606)
T 3c98_A          570 QANGKWEVLIGSTH  583 (606)
T ss_dssp             HHHSSCEEEEEESS
T ss_pred             HHcCCcEEEEEeCC
Confidence            876 4799999996

>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1

Probab=99.97  E-value=1.9e-30  Score=252.58  Aligned_cols=212  Identities=17%  Similarity=0.151  Sum_probs=148.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccCCcchHHHHHHhhhCCC-CChhhHHHHHHHHHHhCCC-CCCh
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKED-VTLDNKLRLLMIAASIYPE-KFEG   83 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~gd~~~k~li~~L~~~~~-~~~~dkLRLllLy~l~~~~-~~~~   83 (251)
                      ++++..+++|++||++|++.+++++|++++++||+|+ +..+.++++++|. ++. .+++|||||+|||+|++ + |+++
T Consensus       396 ~~~~~~l~~H~~ia~~l~~~i~~~~l~~~~e~EQ~l~-~~~~~~~i~~ll~-~~~~~~~~dkLRLl~Ly~l~~-~~g~~~  472 (671)
T 1mqs_A          396 TAKKNTIDTHMNIFAALLSQLESKSLDTFFEVEQDPG-STKTRSRFLDILK-DGKTNNLEDKLRSFIVLYLTS-TTGLPK  472 (671)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHTSCCS-SHHHHHHHHHHTT-SCCSTTHHHHHHHHHHHHHHC-SSCCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHh-cCchHHHHHHHHh-CcCCCCHHHHHHHHHHHHHHc-CCCCCH
Confidence            4678889999999999999999999999999999997 4333457888886 544 49999999999999988 7 8998


Q ss_pred             HHH---HHHHHHcCCChhHHHHHHHHHHhcCCc-----ccc----------ccccCCCcccc---cCCC-C-CCcccccc
Q 040151           84 EKG---LNLMKLAKLTADDMTAVNNMRLFGGSS-----EKK----------KSRRGKKRTAR---KDRS-G-GEEICKYP  140 (251)
Q Consensus        84 ~~~---~~ll~~~gl~~~~~~~l~~l~~lg~~~-----~~~----------~~~~k~~~~~~---k~~~-~-~~~~y~~s  140 (251)
                      +++   .++++.+|++...+..|.++..++...     ...          ++.-......+   +-.. + ......++
T Consensus       473 ~~~~~l~~~l~~~G~~~~~~~~l~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~dl~~~~~~r~~~~~~~~g~~~~~~~v~  552 (671)
T 1mqs_A          473 DFVQNVENYFKENDYDINALKYVYKLREFMQLSNMSLQNKSLEDGSDSAFKPSNLTLSGIYGLTEGKLQGGVGSLISGIK  552 (671)
T ss_dssp             HHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHHHHHHSCCCCC------------------CHHHHHTTTSSCSSSHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccccccccccccccccccccccccccHHHHHHHHhccchhhHHHhHH
Confidence            884   566788999877777777776553211     000          00000000000   0000 0 00011123


Q ss_pred             -----CccchHHHHHHHHhcC-----C--CCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcc
Q 040151          141 -----RSLKIWHKLVEKLGKN-----E--LSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALS  208 (251)
Q Consensus       141 -----r~~P~l~~ile~l~~~-----~--l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (251)
                           ++.|.+.+++++++++     +  ++.++|||++|..+..  ..+.        +.  .                
T Consensus       553 n~~P~~~~~~l~~ive~l~~~~~~~~k~~l~~~~y~~~~p~~~~~--~~~~--------~~--~----------------  604 (671)
T 1mqs_A          553 KLLPEKKTIPITNVVDAIMDPLNSSQKNLETTDSYLYIDPKITRG--SHTR--------KP--K----------------  604 (671)
T ss_dssp             HTCCCCCCCHHHHHHHHHHCSTTSCHHHHHHHTTSEEECTTSSSC--SSSC--------CC--C----------------
T ss_pred             hhCCCcccchHHHHHHHHHhccccccccCCCccCceeeCCCCcCC--CCCC--------Cc--c----------------
Confidence                 4456688999999998     3  6779999998653210  0000        00  0                


Q ss_pred             cccCCCceEEEEEEcCCCHHHHHHHHHHHhhc---CCeEEEccCC
Q 040151          209 GFEKIGQCIFEFVVGGATSSELRICYKLTTEL---NGEVVLGSSK  250 (251)
Q Consensus       209 ~~~~~~~~iIVFvvGGvTy~E~r~~~els~~~---~~~IiiGsT~  250 (251)
                        ..+++++|||||||+||+|++++|+|+++.   +++||||||+
T Consensus       605 --~~~~~~viVFvVGG~Ty~E~~~l~~l~~~~~~~~~~viiGsT~  647 (671)
T 1mqs_A          605 --RQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTA  647 (671)
T ss_dssp             --CCCCSEEEEEEETCBCHHHHHHHHHHHTTCCSSCCEEEEEESS
T ss_pred             --cCCCCeEEEEEECCccHHHHHHHHHHHhhccCCCceEEEeecc
Confidence              125799999999999999999999999873   7999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	251
d1dn1a_	589	e.25.1.1 (A:) Neuronal Sec1, NSec1 {Rat (Rattus no	8e-24
d1epua_	590	e.25.1.1 (A:) Neuronal Sec1, NSec1 {Longfin inshor	4e-23
d1mqsa_	653	e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccha	6e-15

>d1dn1a_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 589

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.4 bits (242), Expect = 8e-24
 Identities = 45/242 (18%), Positives = 100/242 (41%), Gaps = 27/242 (11%)

Query: 17  ALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAK-------EDVTLDNKLRL 69
            L +   +  + T + +L ++EQDL        + IK             +V+  +K+R+
Sbjct: 346 HLAEDCMKHYQGT-VDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVSTYDKIRI 404

Query: 70  LMIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKD 129
           +++   +     E      L++ A++  +D   + NM   G       + R + +  RK+
Sbjct: 405 ILLYIFLKNGITEENL-NKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKE 463

Query: 130 RSGGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWAR 189
           R   +   +  R   I   ++E   +++L    YP + +  + A  + +  S R   W +
Sbjct: 464 RISEQTY-QLSRWTPIIKDIMEDTIEDKLDTKHYP-YISTRSSASFSTTAVSARYGHWHK 521

Query: 190 PRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG-EVVLGS 248
            ++  +                + G  +  F++GG + +E+R  Y++T      EV++GS
Sbjct: 522 NKAPGEY---------------RSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGS 566

Query: 249 SK 250
           + 
Sbjct: 567 TH 568

>d1epua_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Longfin inshore squid (Loligo pealei) [TaxId: 6621]} Length = 590

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Longfin inshore squid (Loligo pealei) [TaxId: 6621]

 Score = 95.5 bits (237), Expect = 4e-23
 Identities = 45/245 (18%), Positives = 91/245 (37%), Gaps = 30/245 (12%)

Query: 18  LHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLT-------AKEDVTLDNKLRLL 70
           L +   +  ++  + +L ++EQDL        + I+            + ++  +K+R++
Sbjct: 347 LAEDCMKQYQQH-VDKLCKVEQDLAMGTDADGEKIRDHMRNIVPILLDQKISAYDKIRII 405

Query: 71  MIAASIYPEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDR 130
           ++   I+      E    L++ A + A++   +N+M+  G    +   RR   +      
Sbjct: 406 LLY-IIHKGGISEENLAKLVQHAHIPAEEKWIINDMQNLGVPIIQDGGRRKIPQPYHTHN 464

Query: 131 S---GGEEICKYPRSLKIWHKLVEKLGKNELSKDDYPSHFAVINEAPVAHSMRSRRTRTW 187
                 +   +  R       ++E   +++L    YP         P      S R   W
Sbjct: 465 RKERQADHTYQMSRWTPYMKDIMEAAVEDKLDTRHYP-FLNGGGPRPSCQQPVSVRYGHW 523

Query: 188 ARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLTTELNG--EVV 245
            + +                    K G  +  FVVGG + SE+R  Y++T       EV+
Sbjct: 524 HKDKGQASY---------------KSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEVI 568

Query: 246 LGSSK 250
           LGS+ 
Sbjct: 569 LGSTH 573

>d1mqsa_ e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 653

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Sly1P protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.7 bits (175), Expect = 6e-15
 Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 15/242 (6%)

Query: 20  QKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPE 79
             +   +    L    ++EQD           + +L   +   L++KLR  ++       
Sbjct: 396 AALLSQLESKSLDTFFEVEQDPG-STKTRSRFLDILKDGKTNNLEDKLRSFIVLYLTSTT 454

Query: 80  KFEGEKGLNLMKLAKLTADDMTAVNNMRLFGG-SSEKKKSRRGKKRTARKDRSGGEEICK 138
               +   N+    K    D+ A+  +            S + K      D +       
Sbjct: 455 GLPKDFVQNVENYFKENDYDINALKYVYKLREFMQLSNMSLQNKSLEDGSDSAFKPSNLT 514

Query: 139 YPRSLKIWHKLVEKLGKNELS--KDDYPSH--FAVINEAPVAHSMRSRRTRTWARPRSSD 194
                 +    ++    + +S  K   P      + N      ++      +     ++D
Sbjct: 515 LSGIYGLTEGKLQGGVGSLISGIKKLLPEKKTIPITNVVD---AIMDPLNSSQKNLETTD 571

Query: 195 DGCSSDSVLK---HALSGFEKIGQCIFEFVVGGATSSELRICYKLTTEL---NGEVVLGS 248
                D  +    H      +       FVVGG    E +   +          +V+ GS
Sbjct: 572 SYLYIDPKITRGSHTRKPKRQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGS 631

Query: 249 SK 250
           + 
Sbjct: 632 TA 633

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	251
d1epua_	590	Neuronal Sec1, NSec1 {Longfin inshore squid (Lolig	100.0
d1dn1a_	589	Neuronal Sec1, NSec1 {Rat (Rattus norvegicus) [Tax	100.0
d1mqsa_	653	Sly1P protein {Baker's yeast (Saccharomyces cerevi	99.92

>d1epua_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Longfin inshore squid (Loligo pealei) [TaxId: 6621]}

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Longfin inshore squid (Loligo pealei) [TaxId: 6621]

Probab=100.00  E-value=6e-35  Score=277.90  Aligned_cols=226  Identities=21%  Similarity=0.316  Sum_probs=171.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc-------hHHHHHHhhhCCCCChhhHHHHHHHHHHhC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE-------FKDVIKVLTAKEDVTLDNKLRLLMIAASIY   77 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~-------~k~li~~L~~~~~~~~~dkLRLllLy~l~~   77 (251)
                      ++++..+++|++|+++|++.+++ +|.+++++||++++| +.+       .+++++.|. +...+.+|||||+|||++++
T Consensus       335 ~~~~~~l~~H~~i~~~l~~~i~~-~l~~~~~~Eq~i~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~d~LRLl~l~~l~~  412 (590)
T d1epua_         335 QKELSKYSTHLHLAEDCMKQYQQ-HVDKLCKVEQDLAMGTDADGEKIRDHMRNIVPILL-DQKISAYDKIRIILLYIIHK  412 (590)
T ss_dssp             HHHHTTSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHSBCTTSCBCCCCHHHHHHHHT-CTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCcchhhHhHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHhc
Confidence            46778899999999999999985 699999999999998 532       357888887 88999999999999999987


Q ss_pred             CCCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCc---ccccCCCCCCccccccCccchHHHHHHHHh
Q 040151           78 PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKR---TARKDRSGGEEICKYPRSLKIWHKLVEKLG  154 (251)
Q Consensus        78 ~~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~---~~~k~~~~~~~~y~~sr~~P~l~~ile~l~  154 (251)
                       +|++++++.++++.++++.+.+.++.+|..+|....+.....+...   ...+...+.+..|.++||+|+++++++.++
T Consensus       413 -~g~~~~~~~~l~~~~~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~y~~s~y~Pli~~lve~~~  491 (590)
T d1epua_         413 -GGISEENLAKLVQHAHIPAEEKWIINDMQNLGVPIIQDGGRRKIPQPYHTHNRKERQADHTYQMSRWTPYMKDIMEAAV  491 (590)
T ss_dssp             -TCBCHHHHHHHHHHTTCCHHHHHHHHHGGGGTCCCBSCTTSCCCCCTTSGGGSCCCCSCCSCGGGCCCCHHHHHHHHHH
T ss_pred             -cCCChHHHHHHHHHcCCCHHHHHHHHHHHHhCCcccccccccccchhhhccccccCCccccceeecchHHHHHHHHHHH
Confidence             8999999999999999999999999999999977644432222111   112222467899999999999999999999


Q ss_pred             cCCCCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHHH
Q 040151          155 KNELSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICY  234 (251)
Q Consensus       155 ~~~l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~~  234 (251)
                      +++++.+.||++.+..+..... ...+.+.+.|.+.++..               ...+++++|||||||+||+|+++++
T Consensus       492 ~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~viVfvvGGvTy~Ei~~l~  555 (590)
T d1epua_         492 EDKLDTRHYPFLNGGGPRPSCQ-QPVSVRYGHWHKDKGQA---------------SYKSGPRLIIFVVGGISYSEMRSAY  555 (590)
T ss_dssp             TTCSCTTTSCBTTSCC-----------------------------------------CCCCEEEEEEETCBCHHHHHHHH
T ss_pred             hCCCCccccccccCCCCCcccc-cccccccCcccCCCCcc---------------ccCCCCEEEEEEECCcCHHHHHHHH
Confidence            9999999999998765432111 11111223444433321               1236789999999999999999999


Q ss_pred             HHHhhc--CCeEEEccCC
Q 040151          235 KLTTEL--NGEVVLGSSK  250 (251)
Q Consensus       235 els~~~--~~~IiiGsT~  250 (251)
                      +|+++.  |++|+||||+
T Consensus       556 ~l~~~~~~~~~iiiGsT~  573 (590)
T d1epua_         556 EVTQTAKNNWEVILGSTH  573 (590)
T ss_dssp             HHHTSSCSSCEEEEEESS
T ss_pred             HHHHhhCCCcEEEEEeCC
Confidence            999864  7999999996

>d1dn1a_ e.25.1.1 (A:) Neuronal Sec1, NSec1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Neuronal Sec1, NSec1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8e-35  Score=277.09  Aligned_cols=225  Identities=20%  Similarity=0.335  Sum_probs=170.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccC-Ccc-------hHHHHHHhhhCCCCChhhHHHHHHHHHHhC
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFC-DAE-------FKDVIKVLTAKEDVTLDNKLRLLMIAASIY   77 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~g-d~~-------~k~li~~L~~~~~~~~~dkLRLllLy~l~~   77 (251)
                      ++++..+++|++|+++|++.++ ++|++++++||++++| +.+       ..++++.|. +..++++|||||+|||++++
T Consensus       335 ~~~~~~l~~H~~i~~~l~~~~~-~~l~~~~~~Eq~i~~~~~~~~~~~~~~~~~i~~~l~-~~~~~~~d~LRL~~l~~l~~  412 (589)
T d1dn1a_         335 QKELSKYSTHLHLAEDCMKHYQ-GTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILL-DANVSTYDKIRIILLYIFLK  412 (589)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHSBCSSCCBCCCTHHHHHHHHH-CTTSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHc
Confidence            5678889999999999999996 7899999999999998 432       246778886 88999999999999999988


Q ss_pred             CCCCChHHHHHHHHHcCCChhHHHHHHHHHHhcCCccccccccCCCcccccCCCCCCccccccCccchHHHHHHHHhcCC
Q 040151           78 PEKFEGEKGLNLMKLAKLTADDMTAVNNMRLFGGSSEKKKSRRGKKRTARKDRSGGEEICKYPRSLKIWHKLVEKLGKNE  157 (251)
Q Consensus        78 ~~~~~~~~~~~ll~~~gl~~~~~~~l~~l~~lg~~~~~~~~~~k~~~~~~k~~~~~~~~y~~sr~~P~l~~ile~l~~~~  157 (251)
                       +|+++++++++++..+++...+.++.+|+.+|....+.....+......+. ...+..|.++||+|+++++++.++++.
T Consensus       413 -~g~~~~~~~~l~~~~~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~y~Pl~~~l~~~~~~~~  490 (589)
T d1dn1a_         413 -NGITEENLNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKE-RISEQTYQLSRWTPIIKDIMEDTIEDK  490 (589)
T ss_dssp             -TCBCHHHHHHHHHHHTCCHHHHHHHHHGGGGTCCCBCCCGGGCCCCCCCCC-CCCSCCCTTCCCCCHHHHHHHHHHTTC
T ss_pred             -CCCCHHHHHHHHHHcCCChHHHHHHHHHHHhCCccccCchhhccccccccc-CCcccccccccchHHHHHHHHHHHhCC
Confidence             899999999999999999999999999999997765443222222222222 356788999999999999999999999


Q ss_pred             CCCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccccCCCceEEEEEEcCCCHHHHHHHHHHH
Q 040151          158 LSKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGFEKIGQCIFEFVVGGATSSELRICYKLT  237 (251)
Q Consensus       158 l~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~r~~~els  237 (251)
                      ++.+.||++.+......+.... ..+++.|.+.+.+.               ....++++|||||||+||+|++++|+|+
T Consensus       491 l~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------------~~~~~~~viVF~vGGvTy~E~~~l~~l~  554 (589)
T d1dn1a_         491 LDTKHYPYISTRSSASFSTTAV-SARYGHWHKNKAPG---------------EYRSGPRLIIFILGGVSLNEMRCAYEVT  554 (589)
T ss_dssp             SCTTTSCCSSCC------------------------------------------CCCCEEEEEEETCEEHHHHHHHHHHH
T ss_pred             CCcccCcccCCCcccccccccc-ccccccccccCCCC---------------cCCCCCEEEEEEECCcCHHHHHHHHHHH
Confidence            9999999997664322111111 11223454443321               1236889999999999999999999999


Q ss_pred             hhcC-CeEEEccCC
Q 040151          238 TELN-GEVVLGSSK  250 (251)
Q Consensus       238 ~~~~-~~IiiGsT~  250 (251)
                      ++.+ ++|+||||+
T Consensus       555 ~~~~~~~iiiGsT~  568 (589)
T d1dn1a_         555 QANGKWEVLIGSTH  568 (589)
T ss_dssp             HHHSSCEEEEEESS
T ss_pred             HHcCCceEEEEeCC
Confidence            8876 699999996

>d1mqsa_ e.25.1.1 (A:) Sly1P protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Multi-domain proteins (alpha and beta)
fold: Sec1/munc18-like (SM) proteins
superfamily: Sec1/munc18-like (SM) proteins
family: Sec1/munc18-like (SM) proteins
domain: Sly1P protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=9.4e-25  Score=209.35  Aligned_cols=214  Identities=17%  Similarity=0.136  Sum_probs=132.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhhccCCcchHHHHHHhhhCCCCChhhHHHHHHHHHHhCCCCCChHH
Q 040151            6 TLHVTFVAHDSALHQKINRIIRETGLRELGQLEQDLVFCDAEFKDVIKVLTAKEDVTLDNKLRLLMIAASIYPEKFEGEK   85 (251)
Q Consensus         6 ~~~~~~v~~H~~ia~~~~~~~~~~~L~~~~elEQ~la~gd~~~k~li~~L~~~~~~~~~dkLRLllLy~l~~~~~~~~~~   85 (251)
                      .+.++.+++|++|+++|++.+++++|.+++++||+|++|.. ..+++..+.+....+.+|||||++||++.+.++..+.+
T Consensus       382 ~~~~~~l~~H~~i~~~l~~~~~~~~l~~~~~lEq~i~~~~~-~~~~l~~i~~~~~~~~~d~lRll~l~~l~~~~~~~~~~  460 (653)
T d1mqsa_         382 TAKKNTIDTHMNIFAALLSQLESKSLDTFFEVEQDPGSTKT-RSRFLDILKDGKTNNLEDKLRSFIVLYLTSTTGLPKDF  460 (653)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHTSCCSSHHH-HHHHHHHTTSCCSTTHHHHHHHHHHHHHHCSSCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcCcc-HHHHHHHHHhcccCCHHHHHHHHHHHHHHccCCCCHHH
Confidence            35678899999999999999999999999999999999832 23455555546778899999999888887756777766


Q ss_pred             HH---HHHHHcCCChhHHHHHHHHHHhcCCc---cccccccCCCcccccCC---CCCCcccc------------------
Q 040151           86 GL---NLMKLAKLTADDMTAVNNMRLFGGSS---EKKKSRRGKKRTARKDR---SGGEEICK------------------  138 (251)
Q Consensus        86 ~~---~ll~~~gl~~~~~~~l~~l~~lg~~~---~~~~~~~k~~~~~~k~~---~~~~~~y~------------------  138 (251)
                      ++   +.++..|++...+..+..|..++...   ..............+..   ......+.                  
T Consensus       461 ~~~~~~~l~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  540 (653)
T d1mqsa_         461 VQNVENYFKENDYDINALKYVYKLREFMQLSNMSLQNKSLEDGSDSAFKPSNLTLSGIYGLTEGKLQGGVGSLISGIKKL  540 (653)
T ss_dssp             HHHHHHHHHTTTCCCTHHHHHHHHHHHHHHHHHHSCCCCC------------------CHHHHHTTTSSCSSSHHHHHHT
T ss_pred             HHHHHHHHHhcCCChHHHHHHHHHHHHhhhccccccccccccCccccccccchhhccchhhhhHhhhhhhHHHHHhhhhc
Confidence            54   45677777767777776666543110   00000000000000000   00000000                  


Q ss_pred             ccCccc-hHHHHHHHHhcCCC-------CCCCCCcccCcCCCCccccCCCcccccccccCCCCCCCCCchhhhhhhcccc
Q 040151          139 YPRSLK-IWHKLVEKLGKNEL-------SKDDYPSHFAVINEAPVAHSMRSRRTRTWARPRSSDDGCSSDSVLKHALSGF  210 (251)
Q Consensus       139 ~sr~~P-~l~~ile~l~~~~l-------~~~~fp~~~~~~~~~~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (251)
                      +..+.| .+.++++.+.....       ..+.|+++++....        .   +.+..+                   .
T Consensus       541 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~-------------------~  590 (653)
T d1mqsa_         541 LPEKKTIPITNVVDAIMDPLNSSQKNLETTDSYLYIDPKITR--------G---SHTRKP-------------------K  590 (653)
T ss_dssp             CCCCCCCHHHHHHHHHHCSTTSCHHHHHHHTTSEEECTTSSS--------C---SSSCCC-------------------C
T ss_pred             CccCCCcccchhhHhhhcchhhccccccccccccccCccccC--------C---CCCCCc-------------------c
Confidence            111111 13455665544321       23456665544211        0   011111                   1


Q ss_pred             cCCCceEEEEEEcCCCHHHHHHHHHHHhhc---CCeEEEccCC
Q 040151          211 EKIGQCIFEFVVGGATSSELRICYKLTTEL---NGEVVLGSSK  250 (251)
Q Consensus       211 ~~~~~~iIVFvvGGvTy~E~r~~~els~~~---~~~IiiGsT~  250 (251)
                      ..+++++||||||||||+|+|++|+|+++.   +++||||||+
T Consensus       591 ~~~~~~viVF~vGGvTy~Ei~~l~~l~~~~~~~~~~iiiGsT~  633 (653)
T d1mqsa_         591 RQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTA  633 (653)
T ss_dssp             CCCCSEEEEEEETCBCHHHHHHHHHHHTTCCSSCCEEEEEESS
T ss_pred             cCCCCEEEEEEECCcCHHHHHHHHHHHHhccCCCcEEEEeeCC
Confidence            135789999999999999999999999875   7899999996