Citrus Sinensis ID: 040217

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MAPTNGSILATESWDIADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSEKKILGQVSIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFAKISNVCDENM
cccccccccccccHHHHHHHcccccHHHHHHHccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEcccccccEEEEcccEEEEEEcccccccccccccccccccEEEEEEcccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccc
ccccccccccccccHccccEccccccHHHHHHcccccccHHcEcccccccccccccccccccEEEccccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccHccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccccccccccccccccEEEEEcccccccEEcccccEEEEEEccHHHEEEcccEEEEEEEEEEcccccEEEEEEEEccccccEccccHHHcccccccccccccHHHHHHHHHHcccccccHHHEEEEcccccccc
maptngsilateswDIADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSekkilgqvsipfinklkwespEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRkkafhdifypfgyekrkyskensptnnvrfgSSFVRHVERALDWKDSLSLfyvseeetaafwppvckdeMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRngryksfehyvigngsqnrisvplfvnlkpeailcpfpkvlangekplykpvlcadysrhfytkahvgnktidFAKISNVCDENM
MAPTNGSILATESWDIADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSEKKILGQVSIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYekrkyskensptnnvrfgSSFVRHVERALDWKDSLSLFYVSeeetaafwppvckDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTkahvgnktiDFAKISNVCDENM
MAPTNGSILATESWDIADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSEKKILGQVSIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFAKISNVCDENM
*******ILATESWDIADFVINTGHGVKGLAEMGLKSLQKQFH******LSEKKILGQVSIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKY********NVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFAKISNVC****
*****************DFVINTGHGVKGLAEMGLKSLQKQFHQP**************SIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYL**********LRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFA**********
MAPTNGSILATESWDIADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSEKKILGQVSIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFAKISNVCDENM
***************IADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSEKKILGQVSIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFAKISN******
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAPTNGSILATESWDIADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSEKKILGQVSIPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFAKISNVCDENM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
Q9C899361 Feruloyl CoA ortho-hydrox yes no 0.852 0.770 0.365 1e-57
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.898 0.811 0.341 8e-51
Q9LTH8364 1-aminocyclopropane-1-car no no 0.812 0.728 0.240 3e-15
Q9M2C4370 1-aminocyclopropane-1-car no no 0.782 0.689 0.234 3e-12
Q9SKK4359 Probable 2-oxoacid depend no no 0.815 0.740 0.239 3e-12
Q43383398 1-aminocyclopropane-1-car no no 0.530 0.434 0.3 4e-12
Q9LSW7365 1-aminocyclopropane-1-car no no 0.567 0.506 0.268 5e-12
Q9LSW6362 1-aminocyclopropane-1-car no no 0.579 0.522 0.280 3e-11
Q84MB3365 1-aminocyclopropane-1-car no no 0.570 0.509 0.264 3e-11
P10967363 1-aminocyclopropane-1-car N/A no 0.831 0.746 0.186 7e-10
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function desciption
 Score =  223 bits (569), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 186/372 (50%), Gaps = 94/372 (25%)

Query: 16  IADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSE--KKILGQVSIPFINKLKWESPE 73
           + +FV++ G+GVKGL+E G+K L  Q+ QP +ERL     K     SIP I+    +   
Sbjct: 15  VTNFVVHEGNGVKGLSETGIKVLPDQYIQPFEERLINFHVKEDSDESIPVIDISNLDEKS 74

Query: 74  VAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFH 133
           V+K++CDAAE WGFFQ++NHGV + +                             K A H
Sbjct: 75  VSKAVCDAAEEWGFFQVINHGVSMEVLENM-------------------------KTATH 109

Query: 134 DIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFYVSEEETAAFWP-- 191
             F     EKRK+S+E S + NVRFG+SF  H E+AL+WKD LSLF+VSE E +  WP  
Sbjct: 110 RFFGLPVEEKRKFSREKSLSTNVRFGTSFSPHAEKALEWKDYLSLFFVSEAEASQLWPDS 169

Query: 192 ---------------------------------------------------PVCKDEMLE 200
                                                              P+C +  L 
Sbjct: 170 CRSETLEYMNETKPLVKKLLRFLGENLNVKELDKTKESFFMGSTRINLNYYPICPNPELT 229

Query: 201 Y---RKSSEVLIKRLMHVLVKGLNVKRIDEIR-----------ALMLLDALQIIRNGRYK 246
               R S    +  L+   + GL+V+ +   R            + + DA+QI+ NGRYK
Sbjct: 230 VGVGRHSDVSSLTILLQDEIGGLHVRSLTTGRWVHVPPISGSLVINIGDAMQIMSNGRYK 289

Query: 247 SFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKA 306
           S EH V+ NGS NRISVP+FV+ KPE+++ P  +V+ NGEKP+YK +L  DY +HF+ KA
Sbjct: 290 SVEHRVLANGSYNRISVPIFVSPKPESVIGPLLEVIENGEKPVYKDILYTDYVKHFFRKA 349

Query: 307 HVGNKTIDFAKI 318
           H G KTIDFA I
Sbjct: 350 HDGKKTIDFANI 361
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2C4|ACCH8_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 8 OS=Arabidopsis thaliana GN=At3g61400 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKK4|GSL_ARATH Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW6|ACH10_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
354696022363 citrus dioxygenase [Citrus limetta] 0.904 0.812 0.573 1e-108
225435724358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.895 0.815 0.440 1e-76
224057036358 predicted protein [Populus trichocarpa] 0.895 0.815 0.442 3e-75
225435722358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.871 0.793 0.44 3e-75
224052970361 2-oxoglutarate-dependent dioxygenase [Po 0.898 0.811 0.419 1e-71
358635024358 oxidoreductase [Ipomoea batatas] 0.868 0.790 0.406 3e-69
358635022358 oxidoreductase [Ipomoea batatas] 0.868 0.790 0.401 5e-68
358635020358 oxidoreductase [Ipomoea batatas] 0.868 0.790 0.398 9e-68
356522918355 PREDICTED: 1-aminocyclopropane-1-carboxy 0.858 0.788 0.419 4e-67
356503141353 PREDICTED: 1-aminocyclopropane-1-carboxy 0.849 0.784 0.423 2e-66
>gi|354696022|gb|AER36089.1| citrus dioxygenase [Citrus limetta] Back     alignment and taxonomy information
 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/387 (57%), Positives = 245/387 (63%), Gaps = 92/387 (23%)

Query: 1   MAPTNGSILATESWDIADFVINTGHGVKGLAEMGLKSLQKQFHQPLQERLSEKKILGQVS 60
           MAPTNGSILAT+SWD+ DFV+N GHGVKGL+EMGLKSL KQFHQPL+ER SEKKIL QVS
Sbjct: 1   MAPTNGSILATQSWDLTDFVVNKGHGVKGLSEMGLKSLPKQFHQPLEERFSEKKILDQVS 60

Query: 61  IPFINKLKWESPEVAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILG 120
           IP I+  KWESPEVAKSICD AE+WGFFQIVNHGVPL +                     
Sbjct: 61  IPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGVPLEVLE------------------- 101

Query: 121 HLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLFY 180
                 R K+A H  F     EKRKYSKENSP NNVR+GSSFV HVERAL+WKD LSLFY
Sbjct: 102 ------RVKEATHRFFALPAEEKRKYSKENSPINNVRYGSSFVPHVERALEWKDFLSLFY 155

Query: 181 VSEEETAAFWPPVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRIDEIRALMLLDALQII 240
           VSEEET+AFWPPVCKDEMLEY +SSEV IKRLMHVLVK LNVKRIDEIR  MLL + ++ 
Sbjct: 156 VSEEETSAFWPPVCKDEMLEYMRSSEVFIKRLMHVLVKVLNVKRIDEIREPMLLGSRRVN 215

Query: 241 RN--------------GRYKSFEHYVI-------------GNGSQ----NRISVPLFVNL 269
            N              GR+     + I              NG+       IS  L +N+
Sbjct: 216 LNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHAAPISGSLIINI 275

Query: 270 ------------------------------------KPEAILCPFPKVLANGEKPLYKPV 293
                                               KPEAILCPFP+VLANGEKPLYKPV
Sbjct: 276 GDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPV 335

Query: 294 LCADYSRHFYTKAHVGNKTIDFAKISN 320
           L ADYSRHFYTKAH G KTIDFAKI +
Sbjct: 336 LYADYSRHFYTKAHDGKKTIDFAKIGD 362

Source: Citrus limetta

Species: Citrus limetta

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435724|ref|XP_002285698.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224057036|ref|XP_002299115.1| predicted protein [Populus trichocarpa] gi|222846373|gb|EEE83920.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225435722|ref|XP_002285699.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224052970|ref|XP_002297642.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222844900|gb|EEE82447.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|358635024|dbj|BAL22345.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|358635022|dbj|BAL22344.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|358635020|dbj|BAL22343.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|356522918|ref|XP_003530089.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Glycine max] Back     alignment and taxonomy information
>gi|356503141|ref|XP_003520370.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.257 0.232 0.595 3e-75
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.257 0.232 0.619 2.9e-50
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.312 0.283 0.403 1.6e-26
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.524 0.478 0.284 5.4e-26
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.291 0.269 0.294 1.2e-18
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.236 0.211 0.369 4.1e-18
TAIR|locus:2020798398 2A6 [Arabidopsis thaliana (tax 0.220 0.180 0.414 5.6e-18
TAIR|locus:2098876370 AT3G61400 [Arabidopsis thalian 0.220 0.194 0.385 2.2e-16
TAIR|locus:2009130365 AT1G06620 [Arabidopsis thalian 0.226 0.202 0.378 6.4e-16
TAIR|locus:2052796362 AT2G30840 [Arabidopsis thalian 0.248 0.223 0.317 2.3e-15
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 283 (104.7 bits), Expect = 3.0e-75, Sum P(3) = 3.0e-75
 Identities = 50/84 (59%), Positives = 68/84 (80%)

Query:   235 DALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVL 294
             DA+QI+ NG YKS EH V+ NG  NRISVP+FVN KPE+++ P P+V+ANGE+P+Y+ VL
Sbjct:   278 DAMQIMSNGLYKSVEHRVLANGYNNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVL 337

Query:   295 CADYSRHFYTKAHVGNKTIDFAKI 318
              +DY ++F+ KAH G KT+D+AKI
Sbjct:   338 YSDYVKYFFRKAHDGKKTVDYAKI 361
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0019748 "secondary metabolic process" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010421 "hydrogen peroxide-mediated programmed cell death" evidence=IMP
GO:0009805 "coumarin biosynthetic process" evidence=RCA;IMP
GO:0051213 "dioxygenase activity" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020798 2A6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098876 AT3G61400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00024772001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (358 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-12
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-12
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 5e-11
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 8e-11
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-10
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-10
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-09
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 6e-09
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 5e-08
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 1e-07
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-07
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 6e-07
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-06
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-06
PLN02216357 PLN02216, PLN02216, protein SRG1 6e-06
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 7e-06
PLN02947374 PLN02947, PLN02947, oxidoreductase 8e-06
PLN02704335 PLN02704, PLN02704, flavonol synthase 8e-06
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 9e-06
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-05
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-05
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-05
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-05
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-04
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-04
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 3e-04
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 3e-04
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 4e-04
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-04
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 8e-04
PLN02904357 PLN02904, PLN02904, oxidoreductase 0.001
PLN02485329 PLN02485, PLN02485, oxidoreductase 0.002
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 0.004
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 30/84 (35%), Positives = 48/84 (57%)

Query: 235 DALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVNLKPEAILCPFPKVLANGEKPLYKPVL 294
           D L+++ NG+YKS EH  + N  ++R+S+  F     E  L P P+++ +     Y+   
Sbjct: 276 DTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYN 335

Query: 295 CADYSRHFYTKAHVGNKTIDFAKI 318
             +YSRH+ T    G KT++FAKI
Sbjct: 336 HGEYSRHYVTSKLQGKKTLEFAKI 359

Length = 361
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
PLN02947374 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02904357 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02997325 flavonol synthase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.83
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 98.84
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-59  Score=460.47  Aligned_cols=270  Identities=26%  Similarity=0.463  Sum_probs=237.9

Q ss_pred             cchHHHHhcCCCcccccccCCCccccccccc-----CCCCCcceeeCCC---CCcHHHHHHHHHHHhhcCeEEEecCCCC
Q 040217           25 HGVKGLAEMGLKSLQKQFHQPLQERLSEKKI-----LGQVSIPFINKLK---WESPEVAKSICDAAESWGFFQIVNHGVP   96 (326)
Q Consensus        25 ~~v~~l~~~~~~~~p~~y~~p~~~~~~~~~~-----~~~~~IPvIDls~---~~~~~~~~~l~~A~~~~GFF~lvnHGI~   96 (326)
                      .|||.|+++|+++||++|++|+++|+.....     ....+||||||+.   ..+.+++++|++||++||||||+|||||
T Consensus        26 ~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp  105 (374)
T PLN02947         26 KGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVP  105 (374)
T ss_pred             cCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCC
Confidence            5899999999999999999999998753210     1345799999986   2467899999999999999999999999


Q ss_pred             HHHHhhhhhccccchhhHHHHHhhhHHHHHHHHHHhhccCCCChhhhhhcccCCCCCCccccccCccccccCCCCceecc
Q 040217           97 LTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSL  176 (326)
Q Consensus        97 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FF~L~~P~~eeK~~~~~~~~p~~~~Gy~~~~~~~~~~~~dw~E~~  176 (326)
                      .+++++                      +++.+++||+|  | .|+|++|..... ....||+..+....++..+|+|.+
T Consensus       106 ~~li~~----------------------~~~~~~~FF~L--P-~eeK~k~~~~~~-~~~~gyg~~~~~~~~~~~~~~e~~  159 (374)
T PLN02947        106 SEVIGG----------------------MIDVARRFFEL--P-LEERAKYMSADM-RAPVRYGTSFNQNKDAVFCWRDFL  159 (374)
T ss_pred             HHHHHH----------------------HHHHHHHHhcC--C-HHHHhhhhcccC-CCCeeeccccccccccccCceece
Confidence            999999                      99999999999  9 999999865422 234688765544456678999999


Q ss_pred             cccccchhhhccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC----------------------------
Q 040217          177 SLFYVSEEETAAFWPP---VCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRI----------------------------  225 (326)
Q Consensus       177 ~~~~~p~~~~~~~wP~---~fr~~~~~y~~~~~~la~~lL~~la~~Lgl~~~----------------------------  225 (326)
                      .+...|.....+.||+   +||+++++|+++|.+|+.+||++||++||++++                            
T Consensus       160 ~~~~~p~~~~~~~WP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~  239 (374)
T PLN02947        160 KLVCHPLSDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPE  239 (374)
T ss_pred             eeecCCcccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcc
Confidence            8766665444678996   899999999999999999999999999999631                            


Q ss_pred             -------------------Ccccccc--------------------hhhhHHHhhCCccccccceeecCCCCCeeEEEee
Q 040217          226 -------------------DEIRALM--------------------LLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLF  266 (326)
Q Consensus       226 -------------------d~v~GLQ--------------------vGD~Le~~SNG~~kS~~HRVv~~~~~~R~Sia~F  266 (326)
                                         |+++|||                    |||+||+||||+|||++|||++++.++|||||||
T Consensus       240 ~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F  319 (374)
T PLN02947        240 LTLGMPPHSDYGFLTLLLQDEVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASL  319 (374)
T ss_pred             cccCCCCccCCCceEEEEecCCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEE
Confidence                               7899999                    9999999999999999999999988999999999


Q ss_pred             ecCCCCceeecCcccccCCCCCCCCCccHHHHHHHHHHhccCCCCccccccccc
Q 040217          267 VNLKPEAILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNKTIDFAKISN  320 (326)
Q Consensus       267 ~~P~~d~~I~Plp~~v~~~~p~~y~~vt~~dyl~~~~~~~~~g~~~~d~~ki~~  320 (326)
                      ++|+.|++|.|+++++++++|++|++++++||+..++++...|++.++.+||.-
T Consensus       320 ~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~~  373 (374)
T PLN02947        320 HSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKLIT  373 (374)
T ss_pred             ecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhccC
Confidence            999999999999999999999999999999999999999999999999999853

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-06
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-06
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-06
1w9y_A319 The Structure Of Acc Oxidase Length = 319 5e-04
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 84/214 (39%), Gaps = 43/214 (20%)
Query: 27  VKGLAEMGLKSLQKQFHQPLQER-------LSEKKILGQVSIPFINKLKWESPE------ 73
           V+ LA+ G+ S+ K++ +P +E        L EKK  G   +P I+    ES +      
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGP-QVPTIDLKNIESDDEKIREN 65
Query: 74  VAKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFH 133
             + +  A+  WG   ++NHG+P  L                           R KKA  
Sbjct: 66  CIEELKKASLDWGVMHLINHGIPADLME-------------------------RVKKAGE 100
Query: 134 DIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDS-LSLFYVSEEETAAFWPP 192
           + F     EK KY+ + +      +GS    +    L+W+D    L Y  E+   + WP 
Sbjct: 101 EFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK 160
Query: 193 VCKD---EMLEYRKSSEVLIKRLMHVLVKGLNVK 223
              D      EY K   +L  ++   L  GL ++
Sbjct: 161 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE 194
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-47
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-32
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-12
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-08
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-12
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-05
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-10
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-09
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-06
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 5e-06
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  162 bits (413), Expect = 1e-47
 Identities = 64/379 (16%), Positives = 122/379 (32%), Gaps = 115/379 (30%)

Query: 27  VKGLAEMGLKSLQKQFHQPLQER------LSEKKILGQVSIPFIN--KLKWESP----EV 74
           V+ LA+ G+ S+ K++ +P +E         E+K      +P I+   ++ +        
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 75  AKSICDAAESWGFFQIVNHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHD 134
            + +  A+  WG   ++NHG+P  L                      +    +  + F  
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADL----------------------MERVKKAGEEFFS 104

Query: 135 IFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDWKDSLSLF-YVSEEETAAFWP-- 191
           +      EK KY+ + +      +GS    +    L+W+D      Y  E+   + WP  
Sbjct: 105 L--SVE-EKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161

Query: 192 -PVCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKR---------IDEIRALMLL------- 234
                +   EY K   +L  ++   L  GL ++          ++E+   M +       
Sbjct: 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCP 221

Query: 235 ------------DA-------------LQIIRNG-------------------------- 243
                       D              LQ+   G                          
Sbjct: 222 QPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNG 281

Query: 244 RYKSFEHYVIGNGSQNRISVPLFVNLKPEA-ILCPFPKVLANGEKPLYKPVLCADYSRH- 301
           +YKS  H  + N  + RIS  +F     +  +L P P++++      + P   A +  H 
Sbjct: 282 KYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHK 341

Query: 302 FYTKAHVGNKTIDFAKISN 320
            + K        +     N
Sbjct: 342 LFGKEQE-----ELVSEKN 355
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-58  Score=449.30  Aligned_cols=263  Identities=23%  Similarity=0.389  Sum_probs=231.1

Q ss_pred             CcchHHHHhcCCCcccccccCCCcccccccc---cC---CCCCcceeeCCC--C----CcHHHHHHHHHHHhhcCeEEEe
Q 040217           24 GHGVKGLAEMGLKSLQKQFHQPLQERLSEKK---IL---GQVSIPFINKLK--W----ESPEVAKSICDAAESWGFFQIV   91 (326)
Q Consensus        24 ~~~v~~l~~~~~~~~p~~y~~p~~~~~~~~~---~~---~~~~IPvIDls~--~----~~~~~~~~l~~A~~~~GFF~lv   91 (326)
                      .++||+|+++|+++||++|++|+++++....   ..   ...+||||||+.  .    ++.+++++|.+||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            4689999999999999999999888765321   11   124699999987  1    2456899999999999999999


Q ss_pred             cCCCCHHHHhhhhhccccchhhHHHHHhhhHHHHHHHHHHhhccCCCChhhhhhcccCCCCCCccccccCccccccCCCC
Q 040217           92 NHGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALD  171 (326)
Q Consensus        92 nHGI~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FF~L~~P~~eeK~~~~~~~~p~~~~Gy~~~~~~~~~~~~d  171 (326)
                      |||||.+++++                      +++.+++||+|  | .|+|++|.........+||+........+..|
T Consensus        84 nHGi~~~l~~~----------------------~~~~~~~FF~l--P-~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d  138 (356)
T 1gp6_A           84 NHGIPADLMER----------------------VKKAGEEFFSL--S-VEEKEKYANDQATGKIQGYGSKLANNASGQLE  138 (356)
T ss_dssp             SCSCCHHHHHH----------------------HHHHHHHHHTS--C-HHHHGGGBCBGGGTBCSEEECCCCCSTTCCCC
T ss_pred             CCCCCHHHHHH----------------------HHHHHHHHHCC--C-HHHHHhhcccccccCccccCcCcccCCCCCCC
Confidence            99999999999                      99999999999  9 99999998753103578998876555667899


Q ss_pred             ceecccccccchh-hhccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC----------------------
Q 040217          172 WKDSLSLFYVSEE-ETAAFWPP---VCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRI----------------------  225 (326)
Q Consensus       172 w~E~~~~~~~p~~-~~~~~wP~---~fr~~~~~y~~~~~~la~~lL~~la~~Lgl~~~----------------------  225 (326)
                      |+|+|++...|.. ..++.||+   .||+.+++|+++|.+|+.+||++|+++||++++                      
T Consensus       139 ~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP  218 (356)
T 1gp6_A          139 WEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYP  218 (356)
T ss_dssp             SCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEEC
T ss_pred             hhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecC
Confidence            9999999876653 45788997   899999999999999999999999999999864                      


Q ss_pred             -------------------------Ccccccc--------------------hhhhHHHhhCCccccccceeecCCCCCe
Q 040217          226 -------------------------DEIRALM--------------------LLDALQIIRNGRYKSFEHYVIGNGSQNR  260 (326)
Q Consensus       226 -------------------------d~v~GLQ--------------------vGD~Le~~SNG~~kS~~HRVv~~~~~~R  260 (326)
                                               |+++|||                    +||+||+||||+|||++|||+++++++|
T Consensus       219 p~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R  298 (356)
T 1gp6_A          219 KCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVR  298 (356)
T ss_dssp             CCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCE
T ss_pred             CCCCcccccCcCCccCCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCE
Confidence                                     6799999                    9999999999999999999999988999


Q ss_pred             eEEEeeecCCCCc-eeecCcccccCCCCCCCCCccHHHHHHHHHHhccCCCC
Q 040217          261 ISVPLFVNLKPEA-ILCPFPKVLANGEKPLYKPVLCADYSRHFYTKAHVGNK  311 (326)
Q Consensus       261 ~Sia~F~~P~~d~-~I~Plp~~v~~~~p~~y~~vt~~dyl~~~~~~~~~g~~  311 (326)
                      |||+||++|+.|+ +|+|+++++++++|++|+++|++||+..++.+++.|+.
T Consensus       299 ~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          299 ISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             EEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence            9999999999999 99999999999999999999999999999988876654
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 326
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-24
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 7e-17
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-14
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-09
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-06
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 98.9 bits (245), Expect = 3e-24
 Identities = 60/341 (17%), Positives = 115/341 (33%), Gaps = 60/341 (17%)

Query: 27  VKGLAEMGLKSLQKQFHQPLQER------LSEKKILGQVSIPFINKLKWESP------EV 74
           V+ LA+ G+ S+ K++ +P +E         E+K      +P I+    ES         
Sbjct: 6   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 65

Query: 75  AKSICDAAESWGFFQIVNHGVPLTL-----AATWRIFN---------------GFWLSFY 114
            + +  A+  WG   ++NHG+P  L      A    F+               G    + 
Sbjct: 66  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 125

Query: 115 LFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNN-VRFGSSFVRHVERALDWK 173
             +     G        FH  +     +   + K  S         +  +R +   +   
Sbjct: 126 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 185

Query: 174 DSLSLFYVSEEETAAF-------------WPPVCKDEMLEYRKSSE-------VLIKRLM 213
            S+ L    +                   + P C    L     +         ++  ++
Sbjct: 186 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 245

Query: 214 HVLV-----KGLNVKRIDEIRALMLLDALQIIRNGRYKSFEHYVIGNGSQNRISVPLFVN 268
             L      K +  K + +   + + D L+I+ NG+YKS  H  + N  + RIS  +F  
Sbjct: 246 PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCE 305

Query: 269 LKPEA-ILCPFPKVLANGEKPLYKPVLCADYSRH-FYTKAH 307
              +  +L P P++++      + P   A +  H  + K  
Sbjct: 306 PPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQ 346
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-57  Score=433.35  Aligned_cols=255  Identities=24%  Similarity=0.411  Sum_probs=222.2

Q ss_pred             cchHHHHhcCCCcccccccCCCcccccccc------cCCCCCcceeeCCC--C----CcHHHHHHHHHHHhhcCeEEEec
Q 040217           25 HGVKGLAEMGLKSLQKQFHQPLQERLSEKK------ILGQVSIPFINKLK--W----ESPEVAKSICDAAESWGFFQIVN   92 (326)
Q Consensus        25 ~~v~~l~~~~~~~~p~~y~~p~~~~~~~~~------~~~~~~IPvIDls~--~----~~~~~~~~l~~A~~~~GFF~lvn   92 (326)
                      ..||+|+++|+++||++|++|+++++.+..      .....+||||||+.  .    .+++++++|.+||++||||||+|
T Consensus         4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~n   83 (349)
T d1gp6a_           4 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   83 (349)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             cchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence            469999999999999999999999887532      23466899999987  1    35678999999999999999999


Q ss_pred             CCCCHHHHhhhhhccccchhhHHHHHhhhHHHHHHHHHHhhccCCCChhhhhhcccCCCCCCccccccCccccccCCCCc
Q 040217           93 HGVPLTLAATWRIFNGFWLSFYLFMILGHLGACLRRKKAFHDIFYPFGYEKRKYSKENSPTNNVRFGSSFVRHVERALDW  172 (326)
Q Consensus        93 HGI~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FF~L~~P~~eeK~~~~~~~~p~~~~Gy~~~~~~~~~~~~dw  172 (326)
                      ||||.+++++                      +++++++||+|  | .|+|++|......+...||+...........+|
T Consensus        84 HGI~~~li~~----------------------~~~~~~~FF~l--P-~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~  138 (349)
T d1gp6a_          84 HGIPADLMER----------------------VKKAGEEFFSL--S-VEEKEKYANDQATGKIQGYGSKLANNASGQLEW  138 (349)
T ss_dssp             CSCCHHHHHH----------------------HHHHHHHHHTS--C-HHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCS
T ss_pred             cCCCHHHHHH----------------------HHHHHHHHHcC--C-HHHHhhhhcccccCCccccccccccccccccch
Confidence            9999999999                      99999999999  9 999999987543334456665555556667788


Q ss_pred             eecccccccchh-hhccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-----------------------
Q 040217          173 KDSLSLFYVSEE-ETAAFWPP---VCKDEMLEYRKSSEVLIKRLMHVLVKGLNVKRI-----------------------  225 (326)
Q Consensus       173 ~E~~~~~~~p~~-~~~~~wP~---~fr~~~~~y~~~~~~la~~lL~~la~~Lgl~~~-----------------------  225 (326)
                      .+.+.....+.. ..++.||+   .|++.+++|+++|..|+.+||++++++||++++                       
T Consensus       139 ~~~~~~~~~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~  218 (349)
T d1gp6a_         139 EDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPK  218 (349)
T ss_dssp             CEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECC
T ss_pred             hhhhcccccccccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeeccccc
Confidence            877654444433 56688997   899999999999999999999999999999876                       


Q ss_pred             ------------------------Ccccccc--------------------hhhhHHHhhCCccccccceeecCCCCCee
Q 040217          226 ------------------------DEIRALM--------------------LLDALQIIRNGRYKSFEHYVIGNGSQNRI  261 (326)
Q Consensus       226 ------------------------d~v~GLQ--------------------vGD~Le~~SNG~~kS~~HRVv~~~~~~R~  261 (326)
                                              |+++|||                    +||+||+||||+||||.|||+.+++++||
T Consensus       219 ~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~  298 (349)
T d1gp6a_         219 CPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRI  298 (349)
T ss_dssp             CSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEE
T ss_pred             ccchhhccccccCCCCcceEEEeccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeE
Confidence                                    7889999                    99999999999999999999999999999


Q ss_pred             EEEeeecCCCCcee-ecCcccccCCCCCCCCCccHHHHHHHHHH
Q 040217          262 SVPLFVNLKPEAIL-CPFPKVLANGEKPLYKPVLCADYSRHFYT  304 (326)
Q Consensus       262 Sia~F~~P~~d~~I-~Plp~~v~~~~p~~y~~vt~~dyl~~~~~  304 (326)
                      ||+||++|+.|++| +|+|+|+++++|++|+|+|++||++.++.
T Consensus       299 Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         299 SWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             EEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             EEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHHHh
Confidence            99999999999865 89999999999999999999999999874
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure