Citrus Sinensis ID: 040256

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF
Secondary Structure (PSIPRED)
ccccccEEEEEEccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccHHHHHccccccccEEEEEEEEEEEEccccEEEEEcccccEEEEEEEEEcccccEEEEEEEcccccEEEccccccccEEEccccccccEEEEEEEccccEEEEccccccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEccccccccccccccccccccccccccHHHHHHHHHccccccccEEEEEEccccccccccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEccccccEEEEEEcccccEEEEEEEEccccccEEEEEEEcccccccEcccccccccccccEEcccEEEEEEEEccccEEEEcccccccccEcEEEcccccc
Coil and Loop (DISEMBL)
MNGAWEDAHAtfygdmsggetmqgacgygdlkrqgyGLETAALSTALfnngstcgacfeiicvndpqwclkgagsikitatnfcppnytktkdiwcnppqkhfdlsmpmfvklapskagiipvRYRRILCskqggvkfevkgnpnWTLVLVYNVGGAGDVTAVQVKgsstgwlpmsrnwgqnwqTGTVLLGqglsfqvttsdgktlqfdnvaprnwqfgqtfqgrgnf
Flexible Loop (DISEMBL)
MNGAWEDAHATfygdmsggETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTlqfdnvaprnwqfgqtfqgrgnf
Low Complexity Region (SEG)
MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF
Disordered region (IsUnstruct)
********HATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQ********
Disordered Region (DISOPRED)
**GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF
Disordered Region (DISEMBL)
MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF
Disordered Region (DISPRO)
**GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
Q9FL79	275	Expansin-A23 OS=Arabidops	yes	no	0.991	0.821	0.692	7e-95
Q9FL80	279	Expansin-A22 OS=Arabidops	no	no	0.991	0.810	0.714	1e-94
Q9FL77	276	Expansin-A25 OS=Arabidops	yes	no	0.991	0.818	0.688	3e-94
Q9FL78	279	Putative expansin-A26 OS=	no	no	0.973	0.795	0.714	2e-93
Q9FL76	312	Expansin-A24 OS=Arabidops	no	no	0.986	0.721	0.649	4e-86
Q9LZ99	258	Expansin-A9 OS=Arabidopsi	no	no	0.978	0.864	0.622	8e-82
O48818	257	Expansin-A4 OS=Arabidopsi	no	no	0.978	0.867	0.613	4e-80
O80932	262	Expansin-A3 OS=Arabidopsi	no	no	0.978	0.851	0.613	1e-78
Q9M2S9	260	Expansin-A16 OS=Arabidops	no	no	0.978	0.857	0.591	2e-78
Q852A1	264	Expansin-A7 OS=Oryza sati	yes	no	0.978	0.844	0.607	1e-77

>sp|Q9FL79|EXP23_ARATH Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=3

 Score =  346 bits (888), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 158/228 (69%), Positives = 190/228 (83%), Gaps = 2/228 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++ +W DA ATFYGD+ GGET QGACGYGDL +QGYGLETAALSTALFN G TCGAC++I
Sbjct: 50  LDSSWYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQI 109

Query: 61  ICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGI 120
           +CVNDPQWCL   GS+KITATNFCPP+Y+KT+ +WCNPPQKHFDLS+PMF+K+A  KAG+
Sbjct: 110 MCVNDPQWCL--PGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGV 167

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV+YRRI C++ GGVKFE KGNP + ++L YNVGGAGD+  +QVKG  TGW+ M +NWG
Sbjct: 168 VPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWG 227

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           QNW TG  L GQG+SF+VTTSDG T  F+NV P NW FGQTF G+ NF
Sbjct: 228 QNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGKINF 275

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL80|EXP22_ARATH Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=3

 Score =  345 bits (885), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 163/228 (71%), Positives = 188/228 (82%), Gaps = 2/228 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++  W DA ATFYGD+ GG+T QGACGYG+L RQGYGL TAALSTALFN+G TCGAC+EI
Sbjct: 54  LDTNWYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEI 113

Query: 61  ICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGI 120
           +C  DPQWCL   GS+KITATNFCP NY+KT D+WCNPPQKHFDLS+ MF+K+A  KAG+
Sbjct: 114 MCTRDPQWCL--PGSVKITATNFCPANYSKTTDLWCNPPQKHFDLSLAMFLKIAKYKAGV 171

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PVRYRRI CSK GGVKFE KGNP + +VL+YNVGGAGD+  VQVKG+ TGW+ M +NWG
Sbjct: 172 VPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWG 231

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           QNW T TVL GQGLSF+VTTSDG T  F NV P+NW FGQTF GR NF
Sbjct: 232 QNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDGRINF 279

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL77|EXP25_ARATH Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2

 Score =  344 bits (883), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 157/228 (68%), Positives = 190/228 (83%), Gaps = 2/228 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++ +W DA ATFYGD+ GGET QGACGYGDL +QGYGLETAALSTALFN G TCGAC++I
Sbjct: 51  LDSSWYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQI 110

Query: 61  ICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGI 120
           +CV+DPQWCL   G+IKITATNFCPP+Y+KT+ +WCNPPQKHFDLS+PMF+K+A  KAG+
Sbjct: 111 MCVHDPQWCL--PGTIKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGV 168

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV+YRRI C++ GGVKFE KGNP + ++L YNVGGAGD+  +QVKG  TGW+ M +NWG
Sbjct: 169 VPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWG 228

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           QNW TG  L GQG+SF+VTTSDG T  F+NV P NW FGQTF G+ NF
Sbjct: 229 QNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGKINF 276

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL78|EXP26_ARATH Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=2 SV=2

 Score =  341 bits (875), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 160/224 (71%), Positives = 185/224 (82%), Gaps = 2/224 (0%)

Query: 5   WEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVN 64
           W DA ATFYGD+ GG+T QGACGYG+L RQGYGL TAALSTALFN+G TCGAC+EI+C  
Sbjct: 58  WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTR 117

Query: 65  DPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVR 124
           DPQWCL   GS+KITATNFCP NY+KT D+WCNPPQKHFDLS+ MF+K+A  KAG++PVR
Sbjct: 118 DPQWCL--PGSVKITATNFCPANYSKTTDLWCNPPQKHFDLSLAMFLKIAKYKAGVVPVR 175

Query: 125 YRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQ 184
           YRRI CSK GGVKFE KGNP + +VL+YNVGGAGD+  VQVK + TGW+ M +NWGQNW 
Sbjct: 176 YRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWT 235

Query: 185 TGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           T TVL GQGLSF+VTT+DG T  F NV P+NW FGQTF G+ NF
Sbjct: 236 TSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDGKINF 279

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL76|EXP24_ARATH Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2

 Score =  317 bits (813), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 148/228 (64%), Positives = 183/228 (80%), Gaps = 3/228 (1%)

Query: 2   NGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEII 61
           +  W    ATFYGD++GGET QGACGYGDL +QGYGLETAALSTALFNNGS CGAC+EI+
Sbjct: 87  HSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIM 146

Query: 62  CVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGII 121
           C + PQWCL   GSIKITATNFCPP++TK  D WCNPPQKHFDLS PMF+K+A  KAG++
Sbjct: 147 CEHAPQWCL--PGSIKITATNFCPPDFTKPNDNWCNPPQKHFDLSQPMFLKIAKYKAGVV 204

Query: 122 PVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQ 181
           PV++RR+ C+K GGVKFE+KGNP++ ++L YNVGGAG V A+Q+KG+ T W+ M +NWGQ
Sbjct: 205 PVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQ 264

Query: 182 NWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQF-GQTFQGRGNF 228
            W TG VL GQ LSF++TTSDG   +F +V P +W+  GQ+F G+ NF
Sbjct: 265 IWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSFDGKVNF 312

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZ99|EXPA9_ARATH Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1

 Score =  303 bits (775), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 140/225 (62%), Positives = 173/225 (76%), Gaps = 2/225 (0%)

Query: 3   GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
           G W +AHATFYG+     TM GACGYG+L  QGYG+ TAALSTALFNNG +CG+CFE+ C
Sbjct: 30  GPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKC 89

Query: 63  VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
           +NDP WCL G  SI ITATNFCPPN+ +  D   WCNPP++HFDL+MPMF+ +A  KAGI
Sbjct: 90  INDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGI 149

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV YRRI C K+GG++F + G   + LVLV NV GAGDV  V VKGS+T WL +SRNWG
Sbjct: 150 VPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWG 209

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
           QNWQ+  +L+GQ LSF+V TSDG++   +N+AP NWQFGQT+ G+
Sbjct: 210 QNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGK 254

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|O48818|EXPA4_ARATH Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1

 Score =  297 bits (760), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 138/225 (61%), Positives = 170/225 (75%), Gaps = 2/225 (0%)

Query: 3   GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
           GAW++AHATFYG      TM GACGYG+L  QGYG  TAALSTALFNNG +CGACFE+ C
Sbjct: 29  GAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKC 88

Query: 63  VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
            NDPQWC  G+ SI ITATNFCPPN  +  D   WCNPP++HFDL+MP+F+K+A  +AGI
Sbjct: 89  ANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGI 148

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV YRR+ C K+GG++F + G+  + LVL+ NV GAGD+    VKGS TGW+ +SRNWG
Sbjct: 149 VPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWG 208

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
           QNWQ+  VL+GQ LSF+VT SD +T    N+ P NWQFGQTF G+
Sbjct: 209 QNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGK 253

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|O80932|EXPA3_ARATH Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1

 Score =  292 bits (748), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 138/225 (61%), Positives = 168/225 (74%), Gaps = 2/225 (0%)

Query: 3   GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
           G W++AHATFYG      TM GACGYG+L  QGYG+ TAALSTALFNNG +CGACFEI C
Sbjct: 34  GPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKC 93

Query: 63  VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
            +DP+WC+ G  SI +TATNFCPPN+ +  D   WCNPP++HFDL+MPMF+K+   +AGI
Sbjct: 94  TDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGI 153

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV YRR+ C K GG++F V G   + LVLV NV GAGD+  V VKGS T W+ MSRNWG
Sbjct: 154 VPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWG 213

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
           QNWQ+  VL+GQ LSF+VT SD ++    NVAP  WQFGQTF G+
Sbjct: 214 QNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGK 258

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M2S9|EXP16_ARATH Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1

 Score =  292 bits (747), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 133/225 (59%), Positives = 169/225 (75%), Gaps = 2/225 (0%)

Query: 3   GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
           G+W+ AHATFYG      TM GACGYG+L  QGYG  TAALST+LFN+G +CGACFEI C
Sbjct: 32  GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKC 91

Query: 63  VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
           VNDP+WC  G  S+ +TATNFCPPN  +  D   WCNPP+ HFDL+MP+F+K+A  +AGI
Sbjct: 92  VNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGI 151

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +P+ YRR+ C K GG++F + G+  + LVL+ NV GAGD+    VKGS TGW+ ++RNWG
Sbjct: 152 VPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWG 211

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
           QNWQ+  VL+GQ LSF+VT+SD +T    N+AP NWQFGQTF G+
Sbjct: 212 QNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGK 256

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q852A1|EXPA7_ORYSJ Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1

 Score =  289 bits (739), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 138/227 (60%), Positives = 167/227 (73%), Gaps = 4/227 (1%)

Query: 3   GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
           G W+ AHATFYG      TM GACGYG+L  QGYG+  AALSTALFN+G +CGACFEI C
Sbjct: 34  GEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKC 93

Query: 63  VNDP--QWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKA 118
           VN P  +WC  G+ SI ITATNFCPPNY    D   WCNPP+ HFDL+MPMF+ +A  +A
Sbjct: 94  VNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRA 153

Query: 119 GIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRN 178
           GI+PV YRR+ C K+GGV+F + G   + LVL+ NV GAGD+    VKG+STGW+PMSRN
Sbjct: 154 GIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRN 213

Query: 179 WGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
           WGQNWQ+ +VL+GQ LSF+VT SD +T    N AP  W FGQTF+G+
Sbjct: 214 WGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGK 260

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
449439039	237	PREDICTED: expansin-A23-like [Cucumis sa	1.0	0.962	0.742	1e-100
357502261	251	Expansin [Medicago truncatula] gi|355496	0.982	0.892	0.736	3e-98
296082225	353	unnamed protein product [Vitis vinifera]	0.982	0.634	0.723	8e-96
225451697	251	PREDICTED: expansin-A23 [Vitis vinifera]	0.982	0.892	0.723	8e-96
297801696	279	hypothetical protein ARALYDRAFT_330566 [	0.991	0.810	0.728	2e-95
357502263	352	Expansin [Medicago truncatula] gi|355496	0.960	0.622	0.726	2e-95
356523606	391	PREDICTED: expansin-A22-like [Glycine ma	0.982	0.572	0.734	7e-95
334302911	275	RecName: Full=Expansin-A23; Short=AtEXPA	0.991	0.821	0.692	4e-93
15241680	259	expansin A23 [Arabidopsis thaliana] gi|6	0.991	0.872	0.692	5e-93
449456142	252	PREDICTED: expansin-A22-like [Cucumis sa	1.0	0.904	0.7	7e-93

>gi|449439039|ref|XP_004137295.1| PREDICTED: expansin-A23-like [Cucumis sativus] gi|449483247|ref|XP_004156533.1| PREDICTED: expansin-A23-like [Cucumis sativus]

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/229 (74%), Positives = 198/229 (86%), Gaps = 1/229 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++  W +AHATFYGD+SG ETMQGACGYG+L +QGYGL TAALSTALFNNG  CGACFEI
Sbjct: 9   IDTTWYEAHATFYGDISGYETMQGACGYGNLFQQGYGLATAALSTALFNNGGICGACFEI 68

Query: 61  ICVNDPQ-WCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAG 119
           +CVND   WC+  AG+IKITATNFCPPNYTKT  +WCNPPQ+HFDLS+ MF+K+AP +AG
Sbjct: 69  MCVNDEHNWCIPNAGTIKITATNFCPPNYTKTVGVWCNPPQRHFDLSLYMFIKMAPYRAG 128

Query: 120 IIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNW 179
           IIPVRYRR+LC KQGG++FE+KGNP W LVL+YNVGGAGDV  V++KGSSTGWL MSRNW
Sbjct: 129 IIPVRYRRMLCQKQGGLRFELKGNPYWLLVLLYNVGGAGDVVDVKIKGSSTGWLQMSRNW 188

Query: 180 GQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           GQNWQ GT L+GQGLSF+VTTSD KT++FDNV P +WQFGQ F+G  NF
Sbjct: 189 GQNWQVGTFLVGQGLSFRVTTSDRKTIEFDNVVPSSWQFGQNFEGNSNF 237

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357502261|ref|XP_003621419.1| Expansin [Medicago truncatula] gi|355496434|gb|AES77637.1| Expansin [Medicago truncatula]

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 165/224 (73%), Positives = 191/224 (85%)

Query: 5   WEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVN 64
           W DAHATFYGD +GGETMQGACGYGDL +QGYGL T ALSTALFNNG TCGACF+I CV+
Sbjct: 28  WYDAHATFYGDAAGGETMQGACGYGDLFKQGYGLATTALSTALFNNGFTCGACFQITCVD 87

Query: 65  DPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVR 124
           DPQWC+KGA  I ITATNFCPP+Y+KT D+WCNPPQKHFDLS  MF  +A  KAGI+PV+
Sbjct: 88  DPQWCIKGASPITITATNFCPPDYSKTTDVWCNPPQKHFDLSYKMFTSIAYYKAGIVPVK 147

Query: 125 YRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQ 184
           YRR+ C K GGV+FE+KGNPN+ LVLV+NV  AGDV++V +KGS+TGW+PMS NWGQNW 
Sbjct: 148 YRRVPCIKSGGVRFEIKGNPNFLLVLVFNVANAGDVSSVSIKGSNTGWIPMSHNWGQNWN 207

Query: 185 TGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           TG  L+GQ LSFQVTTS GKTL+ D+VAP NWQFGQT++G GNF
Sbjct: 208 TGMNLVGQALSFQVTTSGGKTLELDSVAPSNWQFGQTYEGNGNF 251

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082225|emb|CBI21230.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (911), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 162/224 (72%), Positives = 189/224 (84%)

Query: 5   WEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVN 64
           W DAHATFYGDM G ETMQGACGYGDL +QGYGLET ALSTALF+NG +CGACFEI CVN
Sbjct: 130 WYDAHATFYGDMQGNETMQGACGYGDLFKQGYGLETTALSTALFDNGLSCGACFEIKCVN 189

Query: 65  DPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVR 124
           DPQWC+  AG+I +TATNFCPPNY+K    WCNPP +HFDLSMPMFV++A  KAGIIPV+
Sbjct: 190 DPQWCIPDAGTITVTATNFCPPNYSKPTGNWCNPPLQHFDLSMPMFVRIAKYKAGIIPVQ 249

Query: 125 YRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQ 184
           YRR+ C K+GG+KFE+KGN  W LVLV+NVGG GDV+ V++KGS+T WL MSRNWGQNW+
Sbjct: 250 YRRVRCHKRGGIKFEIKGNRYWVLVLVFNVGGVGDVSNVKIKGSNTQWLQMSRNWGQNWE 309

Query: 185 TGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
            G VL+GQ LSFQVTT D K +Q DNVAP +W+FGQTF+G+ NF
Sbjct: 310 VGVVLVGQSLSFQVTTRDQKMVQSDNVAPADWKFGQTFEGKSNF 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451697|ref|XP_002276640.1| PREDICTED: expansin-A23 [Vitis vinifera] gi|147768050|emb|CAN62830.1| hypothetical protein VITISV_028518 [Vitis vinifera]

 Score =  355 bits (911), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 162/224 (72%), Positives = 189/224 (84%)

Query: 5   WEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVN 64
           W DAHATFYGDM G ETMQGACGYGDL +QGYGLET ALSTALF+NG +CGACFEI CVN
Sbjct: 28  WYDAHATFYGDMQGNETMQGACGYGDLFKQGYGLETTALSTALFDNGLSCGACFEIKCVN 87

Query: 65  DPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVR 124
           DPQWC+  AG+I +TATNFCPPNY+K    WCNPP +HFDLSMPMFV++A  KAGIIPV+
Sbjct: 88  DPQWCIPDAGTITVTATNFCPPNYSKPTGNWCNPPLQHFDLSMPMFVRIAKYKAGIIPVQ 147

Query: 125 YRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQ 184
           YRR+ C K+GG+KFE+KGN  W LVLV+NVGG GDV+ V++KGS+T WL MSRNWGQNW+
Sbjct: 148 YRRVRCHKRGGIKFEIKGNRYWVLVLVFNVGGVGDVSNVKIKGSNTQWLQMSRNWGQNWE 207

Query: 185 TGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
            G VL+GQ LSFQVTT D K +Q DNVAP +W+FGQTF+G+ NF
Sbjct: 208 VGVVLVGQSLSFQVTTRDQKMVQSDNVAPADWKFGQTFEGKSNF 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801696|ref|XP_002868732.1| hypothetical protein ARALYDRAFT_330566 [Arabidopsis lyrata subsp. lyrata] gi|297314568|gb|EFH44991.1| hypothetical protein ARALYDRAFT_330566 [Arabidopsis lyrata subsp. lyrata]

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 166/228 (72%), Positives = 191/228 (83%), Gaps = 2/228 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++  W DA ATFYGD+ GGET QGACGYG+L RQGYGL TAALSTALFN+G TCGAC+EI
Sbjct: 54  LDTNWYDARATFYGDIHGGETQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEI 113

Query: 61  ICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGI 120
           +C  DPQWCL   GSIKITATNFCPPNYTKT D+WCNPPQKHFDLS+PMF+K+A  KAG+
Sbjct: 114 MCARDPQWCL--PGSIKITATNFCPPNYTKTVDVWCNPPQKHFDLSLPMFLKIAKFKAGV 171

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PVRYRR+LC+K GGVKFE KGNP + +VL+YNVGGAGDV  VQVKG+ TGW+ M +NWG
Sbjct: 172 VPVRYRRVLCAKTGGVKFETKGNPYFLMVLLYNVGGAGDVKFVQVKGNKTGWITMKKNWG 231

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           QNW T TVL GQGLSF+VTTSDG T  F N+ P+NW FGQTF G+ NF
Sbjct: 232 QNWTTDTVLTGQGLSFRVTTSDGVTKDFINLMPKNWGFGQTFVGKINF 279

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357502263|ref|XP_003621420.1| Expansin [Medicago truncatula] gi|355496435|gb|AES77638.1| Expansin [Medicago truncatula]

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 159/219 (72%), Positives = 184/219 (84%)

Query: 5   WEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVN 64
           W DAHATFYGD +GGETM+GACGYGDL +QGYGL TAALSTALFNNG TCGACF+I CVN
Sbjct: 30  WYDAHATFYGDAAGGETMKGACGYGDLFKQGYGLATAALSTALFNNGLTCGACFQIFCVN 89

Query: 65  DPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVR 124
           DP+WC+KGA  I ITATNFCPP+Y+KT D+WCNPPQKHFDLS  MF  +A  KAGI+PV+
Sbjct: 90  DPKWCIKGAHPITITATNFCPPDYSKTHDVWCNPPQKHFDLSYKMFTSIAYYKAGIVPVK 149

Query: 125 YRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQ 184
           YRR+ C K GGV+FE+KGNPN+ LVLV+NV  AGDV+ V +KGS T W+ MSRNWGQNW 
Sbjct: 150 YRRVPCIKSGGVRFELKGNPNFFLVLVHNVANAGDVSRVSIKGSKTSWISMSRNWGQNWH 209

Query: 185 TGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQ 223
            G+  +GQ LSFQV+TSDGKTL FD+V P NWQFGQT+Q
Sbjct: 210 PGSNFVGQALSFQVSTSDGKTLTFDSVVPSNWQFGQTYQ 248

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523606|ref|XP_003530428.1| PREDICTED: expansin-A22-like [Glycine max]

 Score =  352 bits (903), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 166/226 (73%), Positives = 187/226 (82%), Gaps = 2/226 (0%)

Query: 5   WEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVN 64
           W  AHATFYGDM GG+TMQGACGYGDL +QGYGLET ALSTALFNNG TCGACFEI+CVN
Sbjct: 166 WHLAHATFYGDMQGGDTMQGACGYGDLYQQGYGLETTALSTALFNNGLTCGACFEIMCVN 225

Query: 65  DPQWCLKGAGSIKITATNFCPPNYTKTK-DIWCNPPQKHFDLSMPMFVKLAPSKAGIIPV 123
           +PQWC+  AGSIK+TATNFCPPNY     D WCNPPQ+HFDLSM MF K+A  +AGIIPV
Sbjct: 226 EPQWCIPNAGSIKVTATNFCPPNYNPPNFDHWCNPPQEHFDLSMKMFTKIAIYRAGIIPV 285

Query: 124 RYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQN 182
            YRR+ C+K GGVKFE+KGNP W LVL+YNV  AGDVT V +KGSS TGW  MSR WGQN
Sbjct: 286 MYRRVPCNKSGGVKFEMKGNPYWLLVLLYNVASAGDVTQVSIKGSSNTGWKSMSRVWGQN 345

Query: 183 WQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           W TG+ L+GQ LSFQVTTSDGK ++FDNVAP NWQFGQ+++   NF
Sbjct: 346 WVTGSNLVGQALSFQVTTSDGKMMEFDNVAPSNWQFGQSYETYQNF 391

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334302911|sp|Q9FL79.3|EXP23_ARATH RecName: Full=Expansin-A23; Short=AtEXPA23; AltName: Full=Alpha-expansin-23; Short=At-EXP23; Short=AtEx23; AltName: Full=Ath-ExpAlpha-1.17; Flags: Precursor

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 158/228 (69%), Positives = 190/228 (83%), Gaps = 2/228 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++ +W DA ATFYGD+ GGET QGACGYGDL +QGYGLETAALSTALFN G TCGAC++I
Sbjct: 50  LDSSWYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQI 109

Query: 61  ICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGI 120
           +CVNDPQWCL   GS+KITATNFCPP+Y+KT+ +WCNPPQKHFDLS+PMF+K+A  KAG+
Sbjct: 110 MCVNDPQWCL--PGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGV 167

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV+YRRI C++ GGVKFE KGNP + ++L YNVGGAGD+  +QVKG  TGW+ M +NWG
Sbjct: 168 VPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWG 227

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           QNW TG  L GQG+SF+VTTSDG T  F+NV P NW FGQTF G+ NF
Sbjct: 228 QNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGKINF 275

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241680|ref|NP_198744.1| expansin A23 [Arabidopsis thaliana] gi|67633842|gb|AAY78845.1| putative expansin [Arabidopsis thaliana] gi|332007032|gb|AED94415.1| expansin A23 [Arabidopsis thaliana]

 Score =  346 bits (887), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 158/228 (69%), Positives = 190/228 (83%), Gaps = 2/228 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++ +W DA ATFYGD+ GGET QGACGYGDL +QGYGLETAALSTALFN G TCGAC++I
Sbjct: 34  LDSSWYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQI 93

Query: 61  ICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGI 120
           +CVNDPQWCL   GS+KITATNFCPP+Y+KT+ +WCNPPQKHFDLS+PMF+K+A  KAG+
Sbjct: 94  MCVNDPQWCL--PGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGV 151

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV+YRRI C++ GGVKFE KGNP + ++L YNVGGAGD+  +QVKG  TGW+ M +NWG
Sbjct: 152 VPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWG 211

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           QNW TG  L GQG+SF+VTTSDG T  F+NV P NW FGQTF G+ NF
Sbjct: 212 QNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGKINF 259

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456142|ref|XP_004145809.1| PREDICTED: expansin-A22-like [Cucumis sativus] gi|449519595|ref|XP_004166820.1| PREDICTED: expansin-A22-like [Cucumis sativus]

 Score =  345 bits (886), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 161/230 (70%), Positives = 187/230 (81%), Gaps = 2/230 (0%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEI 60
           ++ +W D  ATFYGD  GGETM+GACGYG+L  QGYGL TAALSTALFNNG  CGACFEI
Sbjct: 23  IDTSWHDGRATFYGDFRGGETMEGACGYGNLFHQGYGLATAALSTALFNNGEACGACFEI 82

Query: 61  ICVNDP-QWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAG 119
           +CVND  +WC   AG+IKITATNFCPPNYTKT+DIWCNPPQ+HFDLS+ MF K+AP +AG
Sbjct: 83  MCVNDEHKWCKPNAGTIKITATNFCPPNYTKTQDIWCNPPQRHFDLSLYMFTKMAPYRAG 142

Query: 120 IIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTG-WLPMSRN 178
           +IPVRYRR  C K GG++FE+KGNP W LVL YNVGGAGDV  +Q+KGSSTG WLPM RN
Sbjct: 143 VIPVRYRRTRCHKLGGIRFELKGNPYWLLVLPYNVGGAGDVVDLQIKGSSTGRWLPMKRN 202

Query: 179 WGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
           WGQNW+  + L+GQ LSF+VTTSD KT +FDNV P +W+FGQ F    NF
Sbjct: 203 WGQNWEADSYLVGQSLSFRVTTSDWKTKEFDNVVPSSWEFGQNFVANYNF 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
TAIR|locus:2180182	258	EXPA9 "expansin A9" [Arabidops	0.986	0.872	0.622	1.2e-79
TAIR|locus:2043240	257	EXPA4 "expansin A4" [Arabidops	0.986	0.875	0.614	8.7e-79
TAIR|locus:2099991	260	EXPA16 "expansin A16" [Arabido	0.986	0.865	0.592	1.6e-77
TAIR|locus:2040686	262	EXP3 [Arabidopsis thaliana (ta	0.986	0.858	0.614	2.7e-77
TAIR|locus:2053260	257	EXPA6 "expansin A6" [Arabidops	0.986	0.875	0.596	1.5e-76
TAIR|locus:2153569	255	EXPA2 "expansin A2" [Arabidops	0.982	0.878	0.604	1.5e-76
TAIR|locus:2157215	262	EXPA21 "expansin A21" [Arabido	0.969	0.843	0.611	3.5e-75
TAIR|locus:2161028	255	EXPA14 "expansin A14" [Arabido	0.973	0.870	0.561	4e-74
TAIR|locus:2007106	275	EXPA1 "expansin A1" [Arabidops	0.956	0.792	0.612	5.1e-74
TAIR|locus:2061918	253	EXPA8 "expansin A8" [Arabidops	0.982	0.885	0.595	6.5e-74

TAIR|locus:2180182 EXPA9 "expansin A9" [Arabidopsis thaliana (taxid:3702)]

 Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
 Identities = 142/228 (62%), Positives = 175/228 (76%)

Query:     3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
             G W +AHATFYG+     TM GACGYG+L  QGYG+ TAALSTALFNNG +CG+CFE+ C
Sbjct:    30 GPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKC 89

Query:    63 VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
             +NDP WCL G  SI ITATNFCPPN+ +  D   WCNPP++HFDL+MPMF+ +A  KAGI
Sbjct:    90 INDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGI 149

Query:   121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
             +PV YRRI C K+GG++F + G   + LVLV NV GAGDV  V VKGS+T WL +SRNWG
Sbjct:   150 VPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWG 209

Query:   181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             QNWQ+  +L+GQ LSF+V TSDG++   +N+AP NWQFGQT+ G+ NF
Sbjct:   210 QNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGK-NF 256

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

TAIR|locus:2043240 EXPA4 "expansin A4" [Arabidopsis thaliana (taxid:3702)]

 Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
 Identities = 140/228 (61%), Positives = 172/228 (75%)

Query:     3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
             GAW++AHATFYG      TM GACGYG+L  QGYG  TAALSTALFNNG +CGACFE+ C
Sbjct:    29 GAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKC 88

Query:    63 VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
              NDPQWC  G+ SI ITATNFCPPN  +  D   WCNPP++HFDL+MP+F+K+A  +AGI
Sbjct:    89 ANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGI 148

Query:   121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
             +PV YRR+ C K+GG++F + G+  + LVL+ NV GAGD+    VKGS TGW+ +SRNWG
Sbjct:   149 VPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWG 208

Query:   181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             QNWQ+  VL+GQ LSF+VT SD +T    N+ P NWQFGQTF G+ NF
Sbjct:   209 QNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGK-NF 255

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2099991 EXPA16 "expansin A16" [Arabidopsis thaliana (taxid:3702)]

 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 135/228 (59%), Positives = 171/228 (75%)

Query:     3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
             G+W+ AHATFYG      TM GACGYG+L  QGYG  TAALST+LFN+G +CGACFEI C
Sbjct:    32 GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKC 91

Query:    63 VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
             VNDP+WC  G  S+ +TATNFCPPN  +  D   WCNPP+ HFDL+MP+F+K+A  +AGI
Sbjct:    92 VNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGI 151

Query:   121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
             +P+ YRR+ C K GG++F + G+  + LVL+ NV GAGD+    VKGS TGW+ ++RNWG
Sbjct:   152 VPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWG 211

Query:   181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             QNWQ+  VL+GQ LSF+VT+SD +T    N+AP NWQFGQTF G+ NF
Sbjct:   212 QNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGK-NF 258

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2040686 EXP3 [Arabidopsis thaliana (taxid:3702)]

 Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
 Identities = 140/228 (61%), Positives = 170/228 (74%)

Query:     3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
             G W++AHATFYG      TM GACGYG+L  QGYG+ TAALSTALFNNG +CGACFEI C
Sbjct:    34 GPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKC 93

Query:    63 VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
              +DP+WC+ G  SI +TATNFCPPN+ +  D   WCNPP++HFDL+MPMF+K+   +AGI
Sbjct:    94 TDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGI 153

Query:   121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
             +PV YRR+ C K GG++F V G   + LVLV NV GAGD+  V VKGS T W+ MSRNWG
Sbjct:   154 VPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWG 213

Query:   181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             QNWQ+  VL+GQ LSF+VT SD ++    NVAP  WQFGQTF G+ NF
Sbjct:   214 QNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGK-NF 260

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

TAIR|locus:2053260 EXPA6 "expansin A6" [Arabidopsis thaliana (taxid:3702)]

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 136/228 (59%), Positives = 173/228 (75%)

Query:     3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
             G WE AHATFYG      TM GACGYG+L  QGYG+ TAALSTALFNNG +CGACFE+ C
Sbjct:    29 GGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKC 88

Query:    63 VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
              +DP+WC  G+ SI ITATNFCPPN+ +  D   WCNPP+ HFDL+MPMF+K+A  +AGI
Sbjct:    89 ASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGI 148

Query:   121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
             +PV +RR+ C K+GG++F + G   + LVLV NV GAG++  + VKG+ T W+ MSRNWG
Sbjct:   149 VPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWG 208

Query:   181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             QNWQ+ +VL+GQ LSF+VT+SD ++    N+AP NW+FGQTF G+ NF
Sbjct:   209 QNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGK-NF 255

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

TAIR|locus:2153569 EXPA2 "expansin A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 139/230 (60%), Positives = 170/230 (73%)

Query:     2 NGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEII 61
             NG WE  HATFYG      TM GACGYG+L  QGYGL+TAALSTALFN+G  CGACFE+ 
Sbjct:    29 NGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQ 88

Query:    62 CVNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAG 119
             C +DP+WC+ G  SI ++ATNFCPPN+    D   WCNPP KHFDL+ P F+++A  +AG
Sbjct:    89 CEDDPEWCIPG--SIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAG 146

Query:   120 IIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTG-WLPMSRN 178
             I+PV +RR+ C K GG++F + GNP + LVL+ NVGGAGD+ AV +KGS T  W  MSRN
Sbjct:   147 IVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRN 206

Query:   179 WGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             WGQNWQ+ T L GQ LSFQVT SDG+T+   +V P +WQFGQTF+G G F
Sbjct:   207 WGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEG-GQF 255

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=TAS

TAIR|locus:2157215 EXPA21 "expansin A21" [Arabidopsis thaliana (taxid:3702)]

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 140/229 (61%), Positives = 170/229 (74%)

Query:     1 MNGAWEDAHATFYGDMSGGET-MQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFE 59
             ++ AW DA A +YGD+ GG T ++GACGYGDL + GYGL TAALSTALFN+G++CGAC+E
Sbjct:    41 LDTAWYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYE 100

Query:    60 IICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAG 119
             I+C  +PQ CL  +GSIKITAT+ CPP        WC  P KHFDLS+PMF+K+A  KA 
Sbjct:   101 IMCSPNPQGCL--SGSIKITATDLCPPG-----SAWCYLPNKHFDLSLPMFIKIAQVKAK 153

Query:   120 IIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNW 179
             ++PVRYRR+ C+K GGVKFEVKGNPN   +L YNVGGAGD+ AV  KGS T W+ MSR W
Sbjct:   154 MVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYW 213

Query:   180 GQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             GQNW T   L GQ +S +VTTSDG T  F +V P +W FGQTF G+ NF
Sbjct:   214 GQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDGKTNF 262

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2161028 EXPA14 "expansin A14" [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 127/226 (56%), Positives = 168/226 (74%)

Query:     2 NGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEII 61
             +  W +A ATFYG      TM GACGYG+L  QGYG  TAALSTALFN G +CGACF+I 
Sbjct:    26 SSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIK 85

Query:    62 CVNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAG 119
             CV+DP+WC+   G+I +T TNFCPPN+ +  +   WCNPPQ HFDL+ P+F+++A  KAG
Sbjct:    86 CVDDPKWCI--GGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAG 143

Query:   120 IIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNW 179
             ++PV+YRR+ C ++GG++F + G+  + LVL+ NV GAGDV +V +KG++T W  MSRNW
Sbjct:   144 VVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNW 203

Query:   180 GQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
             GQNWQ+   L GQ LSF+VTTSDG+T+  +N  PRNW FGQT+ G+
Sbjct:   204 GQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGK 249

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2007106 EXPA1 "expansin A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 136/222 (61%), Positives = 164/222 (73%)

Query:     3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
             G W +AHATFYG      TM GACGYG+L  QGYG  TAALSTALFNNG +CGACFEI C
Sbjct:    25 GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRC 84

Query:    63 VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
              ND +WCL G  SI +TATNFCPPN     +   WCNPPQ+HFDLS P+F ++A  +AGI
Sbjct:    85 QNDGKWCLPG--SIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGI 142

Query:   121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
             +PV YRR+ C ++GG++F + G+  + LVL+ NVGGAGDV +  VKGS TGW  MSRNWG
Sbjct:   143 VPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWG 202

Query:   181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTF 222
             QNWQ+ + L GQ LSF+VTTSDG+T+  +NVA   W FGQTF
Sbjct:   203 QNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTF 244

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

GO:0010119 "regulation of stomatal movement" evidence=IMP

TAIR|locus:2061918 EXPA8 "expansin A8" [Arabidopsis thaliana (taxid:3702)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 137/230 (59%), Positives = 172/230 (74%)

Query:     2 NGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEII 61
             +G W+  HATFYG      TM GACGYG+L  QGYG  TAALSTALFNNG TCGAC+E+ 
Sbjct:    27 DGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMK 86

Query:    62 CVNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAG 119
             C +DP+WCL G+ +I +TATNFCPPN   + D   WCNPP +HFDL+ P F+++A  +AG
Sbjct:    87 CNDDPRWCL-GS-TITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAG 144

Query:   120 IIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSST-GWLPMSRN 178
             I+PV +RR+ C K+GG++F + G+  + LVL+ NVGGAGDV AV +KGS T  W  MSRN
Sbjct:   145 IVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRN 204

Query:   179 WGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
             WGQNWQ+ + +  Q LSFQVTTSDG+TL  ++VAP NWQFGQT+QG G F
Sbjct:   205 WGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQG-GQF 253

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL77	EXP25_ARATH	No assigned EC number	0.6885	0.9912	0.8188	yes	no
Q9FL79	EXP23_ARATH	No assigned EC number	0.6929	0.9912	0.8218	yes	no
A2Y5R6	EXPA4_ORYSI	No assigned EC number	0.5982	0.9649	0.8943	N/A	no
Q9FL80	EXP22_ARATH	No assigned EC number	0.7149	0.9912	0.8100	no	no
Q852A1	EXPA7_ORYSJ	No assigned EC number	0.6079	0.9780	0.8446	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00038010001 SubName- Full=Putative uncharacterized protein (Chromosome chr14 scaffold_9, whole genome shotgun sequence); (251 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	228
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	6e-97
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	3e-94
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	2e-49
pfam01357	82	pfam01357, Pollen_allerg_1, Pollen allergen	9e-33
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	1e-26
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	5e-21
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	4e-04

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score =  282 bits (723), Expect = 6e-97
 Identities = 139/224 (62%), Positives = 164/224 (73%), Gaps = 4/224 (1%)

Query: 4   AWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICV 63
            W  AHATFYG      TM GACGYG+L  QGYG  TAALSTALFNNG +CGACFEI CV
Sbjct: 24  GWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCV 83

Query: 64  NDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGII 121
           ND  WCL G  SI ITATNFCPPN     +   WCNPPQ+HFDLS P+F K+A  KAGI+
Sbjct: 84  NDNIWCLPG--SIIITATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIV 141

Query: 122 PVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQ 181
           PV+YRR+ C K GG++F + G+  + LVL+ NVGGAGD+ AV +KGS + W  MSRNWGQ
Sbjct: 142 PVQYRRVACRKSGGIRFTINGHSYFNLVLITNVGGAGDIVAVSIKGSKSNWQAMSRNWGQ 201

Query: 182 NWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
           NWQ+ + L GQ LSF+VTTSDG+T+  +N AP NW FGQT+ G 
Sbjct: 202 NWQSNSYLNGQALSFKVTTSDGRTVISNNAAPSNWAFGQTYTGM 245

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score =  276 bits (706), Expect = 3e-94
 Identities = 125/228 (54%), Positives = 157/228 (68%), Gaps = 5/228 (2%)

Query: 5   WEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC-- 62
           W  AHATFYG      TM GACGYG+L   GYG  TAALSTALFN+G++CG C+ I+C  
Sbjct: 30  WTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDY 89

Query: 63  VNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCNPPQKHFDLSMPMFVKLAPSKAGI 120
             D +WC+KGA S+ ITATNFCPPNY    +   WCNPP +HFD++ P + K+   + GI
Sbjct: 90  QADSRWCIKGA-SVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGI 148

Query: 121 IPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWG 180
           +PV ++R+ C K GGV+F + G   + LVL+ NVGGAG + +V +KGS TGW+ MSRNWG
Sbjct: 149 VPVLFQRVPCKKHGGVRFTINGRDYFELVLISNVGGAGSIQSVSIKGSKTGWMAMSRNWG 208

Query: 181 QNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF 228
            NWQ+   L GQ LSF+VTT+DG+T  F NV P NW FGQTF     F
Sbjct: 209 ANWQSNAYLDGQSLSFKVTTTDGQTRFFLNVVPANWGFGQTFSSSVQF 256

Length = 256

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score =  156 bits (395), Expect = 2e-49
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 3/88 (3%)

Query: 40  TAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDI--WCN 97
           TAALSTALFNNG++CGAC+EI+CV+ P+WC  G GSI +TATNFCPPNY  + D   WCN
Sbjct: 1   TAALSTALFNNGASCGACYEIMCVDSPKWCKPG-GSITVTATNFCPPNYALSNDNGGWCN 59

Query: 98  PPQKHFDLSMPMFVKLAPSKAGIIPVRY 125
           PP+KHFDLS P F K+A  KAGI+PV+Y
Sbjct: 60  PPRKHFDLSQPAFEKIAQYKAGIVPVKY 87

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

>gnl|CDD|216453 pfam01357, Pollen_allerg_1, Pollen allergen

 Score =  113 bits (285), Expect = 9e-33
 Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 4/82 (4%)

Query: 136 VKFEVKG--NPNWTLVLVYNVGGAGDVTAVQVKGSSTG-WLPMSRNWGQNWQTGTVLLGQ 192
           V+F V G  NP +  VLV NVGG GD+ AV++K + +G W+PMSRNWG NWQ+ +VLLG 
Sbjct: 1   VRFTVNGGSNPYFLAVLVENVGGDGDIVAVEIKEAGSGEWIPMSRNWGANWQSDSVLLGG 60

Query: 193 GLSFQVTTSD-GKTLQFDNVAP 213
            LSF+VT+SD GKTL  DNV P
Sbjct: 61  PLSFRVTSSDSGKTLVADNVIP 82

This family contains allergens lol PI, PII and PIII from Lolium perenne. Length = 82

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 97.6 bits (244), Expect = 1e-26
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 15/89 (16%)

Query: 40  TAALSTALFNNGSTCGACFEIIC---VNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWC 96
           TAA S +L+N+G+ CG C+++ C    +    C     S+ +T T+ CP           
Sbjct: 1   TAAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVL-RSVTVTITDRCPF---------- 49

Query: 97  NPPQKHFDLSMPMFVKLAPSKAGIIPVRY 125
            PP++HFDLS P F  LA  +AGI+PV Y
Sbjct: 50  -PPRRHFDLSGPAFEALAKPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score = 87.6 bits (217), Expect = 5e-21
 Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 38/231 (16%)

Query: 10  ATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWC 69
           AT+YG      T  GACG+G+  R   G   A +S  L+ NG+ CGAC+++ C   P  C
Sbjct: 30  ATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVSR-LYRNGTGCGACYQVRC-KAPNLC 87

Query: 70  LKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLA-PSKA------GIIP 122
                 + +  T++   + T             F LS   + +LA P+ A      G++ 
Sbjct: 88  --SDDGVNVVVTDYGEGDKTD------------FILSPRAYARLARPNMAAELFAYGVVD 133

Query: 123 VRYRRILCSKQG-GVKFEVKGN---PNWTLVLVYNVGGAGDVTAVQV-KGSSTGWLPMSR 177
           V YRRI C   G  + F+V  +   P++  +++    G  D+ AV++ +     W  M +
Sbjct: 134 VEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIVMLYQAGQNDILAVEIWQEDCKEWRGMRK 193

Query: 178 NWGQNWQ-----TGTVLLGQGLSFQVTTSDGKT-LQFDNVAPRNWQFGQTF 222
            +G  W       G +     L FQV+ S G+T +Q  NV P +W+ G  +
Sbjct: 194 AYGAVWDMPNPPKGPI----TLRFQVSGSAGQTWVQAKNVIPSDWKAGVAY 240

Length = 247

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 17/94 (18%)

Query: 36  YGLETAALSTALFNNGSTCGACFEIICVND----PQWCLKGAGSIKITATNFCPPNYTKT 91
           +G+  AA S +L+NNG  CG  F + C       P  C     S+ +   + CP     T
Sbjct: 43  FGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCT--GKSVTVKIVDHCPSGCAST 100

Query: 92  KDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRY 125
                       DLS   F ++A   AGII + Y
Sbjct: 101 -----------LDLSREAFAQIANPVAGIINIDY 123

Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
PLN00193	256	expansin-A; Provisional	100.0
PLN00050	247	expansin A; Provisional	100.0
PLN03023	247	Expansin-like B1; Provisional	100.0
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.96
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.95
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.94
PLN00115	118	pollen allergen group 3; Provisional	99.93
PF01357	82	Pollen_allerg_1: Pollen allergen; InterPro: IPR007	99.9
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.8
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	99.05
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.31
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	97.88
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	97.83
PRK10672	361	rare lipoprotein A; Provisional	97.11
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	93.47
cd02854	99	Glycogen_branching_enzyme_like_N_term Glycogen bra	80.24

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=7e-72  Score=480.06  Aligned_cols=225  Identities=56%  Similarity=1.114  Sum_probs=212.1

Q ss_pred             CCceeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEe--CCCccccCCCceEEEEE
Q 040256            3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICV--NDPQWCLKGAGSIKITA   80 (228)
Q Consensus         3 ~~w~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~--~~~~~C~~g~~sv~v~V   80 (228)
                      ++|++++|||||+++++|+++|||||+++...+++.++||+|+++|++|++||+||||+|.  .++..|.+|+ +|+|+|
T Consensus        28 ~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~~~~~~C~~g~-sV~Vt~  106 (256)
T PLN00193         28 SGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGA-SVTITA  106 (256)
T ss_pred             CCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCCCCCCccccCCC-eEEEEE
Confidence            5899999999999999999999999999888889999999999999999999999999995  2567898776 899999


Q ss_pred             ecCCCCCCCCCCC--cCCCCCCCceeechhHHhhccCCCCCeeeEEEEEEEeccCCceEEEEcCCCceEEEEEEeeCCCc
Q 040256           81 TNFCPPNYTKTKD--IWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAG  158 (228)
Q Consensus        81 ~D~Cp~~~~~~~~--~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~i~~~v~s~~~w~av~v~n~~G~~  158 (228)
                      ||+||+++.+|++  .||.+++.|||||..||.+||.+..|+|+|+||||+|+++|+|+|+|++++||++|+|.|++|++
T Consensus       107 td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~~~~Giv~V~yrRVpC~~~G~i~f~v~gn~y~~~vlv~nv~G~g  186 (256)
T PLN00193        107 TNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFTINGRDYFELVLISNVGGAG  186 (256)
T ss_pred             ecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhhhcCCeEeEEEEEeccccCCCcEEEEcCCccEEEEEEEEeCCCc
Confidence            9999998776633  49998899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEcCCCceEEcCCCCCCeEEeCCCCCCccEEEEEEecCCcEEEEccccCCCCCCCeEEecccCC
Q 040256          159 DVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF  228 (228)
Q Consensus       159 ~I~~Vev~~~~~~w~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~y~~~vqf  228 (228)
                      +|++|+||++++.|++|+|+||++|+++.+|.++||+||||+.+|+++++.||||++|++|+||++.|||
T Consensus       187 dV~~v~Ik~~~~~W~~M~R~wGa~W~~~~~l~g~plsfRvts~~G~~~~~~~viPa~W~~G~ty~s~vqf  256 (256)
T PLN00193        187 SIQSVSIKGSKTGWMAMSRNWGANWQSNAYLDGQSLSFKVTTTDGQTRFFLNVVPANWGFGQTFSSSVQF  256 (256)
T ss_pred             cEEEEEEecCCCCeeECcccccceeEecCCCCCCCEEEEEEEcCCeEEEECceeCCCCCCCCeEecCccC
Confidence            9999999998778999999999999999878888999999999999999999999999999999999998

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=5e-71  Score=473.05  Aligned_cols=223  Identities=63%  Similarity=1.173  Sum_probs=209.9

Q ss_pred             CCceeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEec
Q 040256            3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATN   82 (228)
Q Consensus         3 ~~w~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D   82 (228)
                      .+|..++|||||++++.|+++|||||+++..++++.++||+|+++|++|++||+||||+|.+++..|.++  +|+|+|||
T Consensus        23 ~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~~C~~g--sV~V~itd  100 (247)
T PLN00050         23 SGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPG--SIIITATN  100 (247)
T ss_pred             CCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCCCcccCCC--cEEEEEec
Confidence            5899999999999999999999999999888899999999999999999999999999997666789865  79999999


Q ss_pred             CCCCCCCCCCC--cCCCCCCCceeechhHHhhccCCCCCeeeEEEEEEEeccCCceEEEEcCCCceEEEEEEeeCCCcce
Q 040256           83 FCPPNYTKTKD--IWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNWTLVLVYNVGGAGDV  160 (228)
Q Consensus        83 ~Cp~~~~~~~~--~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~i~~~v~s~~~w~av~v~n~~G~~~I  160 (228)
                      +||+++..|++  .||.+++.|||||..||.+||.+..|+|+|+||||+|+++|+|+|+|++++||++|+|.|++|+++|
T Consensus       101 ~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~~~aGii~V~yRRVpC~~~G~i~f~v~g~sy~~~vlv~nv~G~gdi  180 (247)
T PLN00050        101 FCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIVPVQYRRVACRKSGGIRFTINGHSYFNLVLITNVGGAGDI  180 (247)
T ss_pred             CCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhhhcCCeeeeEEEEecCcCCCCeEEEEcCCceeEEEEEEEcCCCccE
Confidence            99998776633  4999889999999999999999999999999999999999999999998889999999999999999


Q ss_pred             EEEEEEcCCCceEEcCCCCCCeEEeCCCCCCccEEEEEEecCCcEEEEccccCCCCCCCeEEecccCC
Q 040256          161 TAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRGNF  228 (228)
Q Consensus       161 ~~Vev~~~~~~w~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~y~~~vqf  228 (228)
                      ++|+|+++++.|++|+|+||++|+++.+|.++||+||||+.+|+++++.||||++|++|++|++. ||
T Consensus       181 ~~V~ikg~~~~W~~M~R~wGa~W~~~~~l~g~~lsfRvt~~~G~~~~~~~V~Pa~W~~G~ty~~~-~f  247 (247)
T PLN00050        181 VAVSIKGSKSNWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVISNNAAPSNWAFGQTYTGM-QF  247 (247)
T ss_pred             EEEEEecCCCCeeECccccCceeEccCCCCCCcEEEEEEecCCcEEEECceeCCCCCCCCeEecC-cC
Confidence            99999998778999999999999998877788999999999999999999999999999999996 98

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=7.2e-65  Score=434.61  Aligned_cols=210  Identities=28%  Similarity=0.598  Sum_probs=190.7

Q ss_pred             CCCceeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEe
Q 040256            2 NGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITAT   81 (228)
Q Consensus         2 ~~~w~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~   81 (228)
                      .++|++++|||||+++++|+++|||||+++..+.++..+||++ +||++|++||+||||+|. ++..|.++  +|+|+||
T Consensus        22 ~~~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~-~~~~C~~~--~v~V~iT   97 (247)
T PLN03023         22 SQDFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCK-APNLCSDD--GVNVVVT   97 (247)
T ss_pred             cCCcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecC-CCCccCCC--CeEEEEE
Confidence            3579999999999999999999999999988888899999999 999999999999999998 57899964  6999999


Q ss_pred             cCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-------CCCCeeeEEEEEEEeccCC-ceEEEEc--CC-CceEEEE
Q 040256           82 NFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-------SKAGIIPVRYRRILCSKQG-GVKFEVK--GN-PNWTLVL  150 (228)
Q Consensus        82 D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-------~~~G~v~v~~~~V~C~~~g-~i~~~v~--s~-~~w~av~  150 (228)
                      |.||.         +   +.|||||.+||.+||.       +..|+|+|+||||+|.++| +|+|+|+  ++ ++|++|+
T Consensus        98 d~~~~---------~---~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRVpC~~~G~~i~F~V~~~s~~p~yl~vl  165 (247)
T PLN03023         98 DYGEG---------D---KTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIV  165 (247)
T ss_pred             eCCCC---------C---CCccccCHHHHHHHhCccccchhccCcEEEeEEEEEecccCCCceEEEEecCCCCCceEEEE
Confidence            99983         3   5899999999999998       5679999999999999999 9999998  43 7899999


Q ss_pred             EEeeCCCcceEEEEEEcCC-CceEEcCCCCCCeEEeCCCCCCccEEEEEE--ecCCcE-EEEccccCCCCCCCeEEeccc
Q 040256          151 VYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQNWQTGTVLLGQGLSFQVT--TSDGKT-LQFDNVAPRNWQFGQTFQGRG  226 (228)
Q Consensus       151 v~n~~G~~~I~~Vev~~~~-~~w~~m~r~~g~~W~~~~~~~g~p~~vRvT--~~~G~~-v~~~~vip~~w~~g~~y~~~v  226 (228)
                      |.|++|+++|++||||+++ ..|++|+|+||++|+++.+|+| ||+||++  ..+|++ |+++||||++|++|+||+++|
T Consensus       166 v~~vgG~GdI~~V~Ik~~~~~~W~~M~rnwGa~W~~~~~l~G-p~slrf~v~~~~g~~~vva~nViPa~Wk~G~TY~s~v  244 (247)
T PLN03023        166 MLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWDMPNPPKG-PITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYDSNI  244 (247)
T ss_pred             EEEcCCCccEEEEEEEecCCCCceECccCCcceeEcCCCCCC-ceeEEEEEEeCCCcEEEEECceeCCCCCCCCEEeccc
Confidence            9999999999999999965 5899999999999999988888 6666664  456755 889999999999999999999


Q ss_pred             CC
Q 040256          227 NF  228 (228)
Q Consensus       227 qf  228 (228)
                      ||
T Consensus       245 q~  246 (247)
T PLN03023        245 QL  246 (247)
T ss_pred             cc
Confidence            98

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.96  E-value=2.5e-28  Score=196.20  Aligned_cols=192  Identities=23%  Similarity=0.323  Sum_probs=157.6

Q ss_pred             eeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCC----CCCCCceEEEEEeCCCccccCCCceEEEEEe
Q 040256            6 EDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNN----GSTCGACFEIICVNDPQWCLKGAGSIKITAT   81 (228)
Q Consensus         6 ~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~----g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~   81 (228)
                      ..|.|||-|..    ..+||=.+   ++.+-+..+.|+++++-+-    .+.-|+.++|.   +|+    |  +.+|.||
T Consensus        31 f~G~ATyTgsG----YsGGAflL---DPI~sd~eITAlNPaqlNlGGipAAmAGaYLrVq---GPK----G--~TTVYVT   94 (232)
T COG4305          31 FEGYATYTGSG----YSGGAFLL---DPIPSDMEITALNPAQLNLGGIPAAMAGAYLRVQ---GPK----G--KTTVYVT   94 (232)
T ss_pred             cceeEEEeccc----ccCceEEe---cCcCCcceeeecCHHHcccCCchhhhccceEEEE---CCC----C--ceEEEEe
Confidence            56888887643    35787754   4444567899999988774    37799999999   675    5  5899999


Q ss_pred             cCCCCCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEEEeccCCceEEEEc--CCCceEEEEEEeeCCCcc
Q 040256           82 NFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVK--GNPNWTLVLVYNVGGAGD  159 (228)
Q Consensus        82 D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~i~~~v~--s~~~w~av~v~n~~G~~~  159 (228)
                      |+.|++         .  .+.||||+.||.+|++..+|+|+|+||.|+-|..||+.++||  |+.||.+|||+|+.  .+
T Consensus        95 DlYPeg---------a--sGaLDLSpNAFakIGnm~qGrIpvqWrvv~aPvtGN~~YRiKeGSs~WWAAIQVRnH~--yP  161 (232)
T COG4305          95 DLYPEG---------A--SGALDLSPNAFAKIGNMKQGRIPVQWRVVKAPVTGNFTYRIKEGSSRWWAAIQVRNHK--YP  161 (232)
T ss_pred             cccccc---------c--ccccccChHHHhhhcchhcCccceeEEEecccccccEEEEEecCCccceeeeeeeccc--Cc
Confidence            999984         2  489999999999999999999999999999999999999999  67899999999999  99


Q ss_pred             eEEEEEEcCCCceEEcCCCCCCeEEeCCCCCCccEEEEEEecCCcEEEEc-cccCCCCC-CCeEEecccCC
Q 040256          160 VTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFD-NVAPRNWQ-FGQTFQGRGNF  228 (228)
Q Consensus       160 I~~Vev~~~~~~w~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~-~vip~~w~-~g~~y~~~vqf  228 (228)
                      |.++|+.+. +.|..|.+.++|+|.-.+ |...||.+|||++.|+.++.. -.+|..=. -..+-.+.|||
T Consensus       162 V~KlE~~qd-g~WinlpK~dYNhFVgT~-LG~~pL~~RmTDIRG~~l~DtlP~Lpk~asSKaY~V~G~VQF  230 (232)
T COG4305         162 VMKLEYEQD-GKWINLPKMDYNHFVGTN-LGTGPLKVRMTDIRGKVLKDTLPKLPKSASSKAYTVPGHVQF  230 (232)
T ss_pred             eEEEEEecC-CeEeeccccccceeeccc-cCCCceEEEEeecccceeecccccccccccCCceeecceeec
Confidence            999999975 789999999999998766 333599999999999988864 35553311 12345677777

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.95  E-value=1.5e-27  Score=185.56  Aligned_cols=102  Identities=35%  Similarity=0.682  Sum_probs=86.1

Q ss_pred             CceeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCC----CccccCCCceEEEE
Q 040256            4 AWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVND----PQWCLKGAGSIKIT   79 (228)
Q Consensus         4 ~w~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~----~~~C~~g~~sv~v~   79 (228)
                      .-+.|+||||++.+     .||| |++   .+++.++||+|+++|++|+.||+||||+|.+.    +..|. ++ +|+|+
T Consensus        20 ~~~~G~AT~Y~~~~-----~gAC-~~~---~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~-gk-sV~V~   88 (125)
T PLN03024         20 YATPGIATFYTSYT-----PSAC-YRG---TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCT-GK-SVTVK   88 (125)
T ss_pred             cccceEEEEeCCCC-----Cccc-cCC---CCCCCEeEEeCHHHcCCCcccCceEEEEECCCCcccccccc-CC-eEEEE
Confidence            35679999998653     5899 544   24688999999999999999999999999731    24687 55 89999


Q ss_pred             EecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEE
Q 040256           80 ATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRR  127 (228)
Q Consensus        80 V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~  127 (228)
                      |+|+||+        .|.   .|||||++||.+||+++.|+|+|+|.+
T Consensus        89 VtD~CP~--------~C~---~~~DLS~~AF~~iA~~~aG~v~V~y~~  125 (125)
T PLN03024         89 IVDHCPS--------GCA---STLDLSREAFAQIANPVAGIINIDYIP  125 (125)
T ss_pred             EEcCCCC--------CCC---CceEcCHHHHHHhcCccCCEEEEEEeC
Confidence            9999995        275   599999999999999999999999974

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.94  E-value=4.8e-27  Score=172.27  Aligned_cols=85  Identities=69%  Similarity=1.364  Sum_probs=76.2

Q ss_pred             EEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCC--cCCCCCCCceeechhHHhhccCCC
Q 040256           40 TAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKD--IWCNPPQKHFDLSMPMFVKLAPSK  117 (228)
Q Consensus        40 ~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~--~~C~~~~~~~DLs~~aF~~la~~~  117 (228)
                      +||+|++||++|++||+||||+|.+++..|.+++ +|+|+|||+||+++..+++  .||.+++.|||||..||.+||.+.
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~-~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~~~   79 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGG-SITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQYK   79 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCC-eEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhhhc
Confidence            4899999999999999999999976788899765 8999999999987655543  499988899999999999999999


Q ss_pred             CCeeeEEE
Q 040256          118 AGIIPVRY  125 (228)
Q Consensus       118 ~G~v~v~~  125 (228)
                      .|+|+|+|
T Consensus        80 ~Gvi~v~y   87 (87)
T smart00837       80 AGIVPVKY   87 (87)
T ss_pred             CCEEeeEC
Confidence            99999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PLN00115 pollen allergen group 3; Provisional

Probab=99.93  E-value=1.7e-25  Score=172.04  Aligned_cols=92  Identities=18%  Similarity=0.387  Sum_probs=81.8

Q ss_pred             EeccCCceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcCC-CceE-EcCCCCCCeEEeCC--CCCCccEEEEEEecC
Q 040256          129 LCSKQGGVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSS-TGWL-PMSRNWGQNWQTGT--VLLGQGLSFQVTTSD  202 (228)
Q Consensus       129 ~C~~~g~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~~-~~w~-~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~  202 (228)
                      +|..  +|+|+|+  +|++||+|++ |    ++|.+|||++++ ..|+ +|+|+||++|++++  +|+| ||+||+|+.+
T Consensus        21 ~~g~--~v~F~V~~gSnp~yL~ll~-~----~dI~~V~Ik~~g~~~W~~~M~rswGavW~~~s~~pl~G-PlS~R~t~~~   92 (118)
T PLN00115         21 SCAT--EVTFKVGKGSSSTSLELVT-N----VAISEVEIKEKGAKDWVDDLKESSTNTWTLKSKAPLKG-PFSVRFLVKG   92 (118)
T ss_pred             hcCC--ceEEEECCCCCcceEEEEE-e----CCEEEEEEeecCCCcccCccccCccceeEecCCCCCCC-ceEEEEEEeC
Confidence            4632  7999999  6799997765 3    569999999986 5899 99999999999865  6777 9999999999


Q ss_pred             CcEEEEccccCCCCCCCeEEecccCC
Q 040256          203 GKTLQFDNVAPRNWQFGQTFQGRGNF  228 (228)
Q Consensus       203 G~~v~~~~vip~~w~~g~~y~~~vqf  228 (228)
                      |++++++||||++||+|++|++++||
T Consensus        93 G~~~va~nViPa~Wk~G~tY~s~vq~  118 (118)
T PLN00115         93 GGYRVVDDVIPESFKAGSVYKTGIQV  118 (118)
T ss_pred             CCEEEECceECCCCCCCCEEeccccC
Confidence            99999999999999999999999998

>PF01357 Pollen_allerg_1: Pollen allergen; InterPro: IPR007117 Expansins are unusual proteins that mediate cell wall extension in plants []

Probab=99.90  E-value=2.4e-23  Score=151.30  Aligned_cols=77  Identities=53%  Similarity=0.923  Sum_probs=64.0

Q ss_pred             eEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcCCC-ceEEcCCCCCCeEEeC-CCCCCccEEEEEEecC-CcEEEEcc
Q 040256          136 VKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSST-GWLPMSRNWGQNWQTG-TVLLGQGLSFQVTTSD-GKTLQFDN  210 (228)
Q Consensus       136 i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~~~-~w~~m~r~~g~~W~~~-~~~~g~p~~vRvT~~~-G~~v~~~~  210 (228)
                      |+|+|+  |++|||+|+|.|++|+++|++|||+++++ +|++|+|+||++|+++ +++++ ||+||||+.+ |++++++|
T Consensus         1 v~f~V~~gS~~~~l~v~v~n~gG~gdi~~Vevk~~~s~~W~~m~r~wGa~W~~~~~~~~~-pls~Rvts~~~G~~vv~~n   79 (82)
T PF01357_consen    1 VRFTVKGGSNPYYLAVLVKNVGGDGDIKAVEVKQSGSGNWIPMKRSWGAVWQIDSNPPGG-PLSFRVTSGDSGQTVVADN   79 (82)
T ss_dssp             EEEEE-TT-BTTEEEEEEEECCTTS-EEEEEEEETTSSS-EE-EEECTTEEEEE-SS--S-SEEEEEEETTTSEEEEEEE
T ss_pred             CEEEECCCCCCcEEEEEEEEcCCCccEEEEEEEeCCCCCceEeecCcCceEEECCCCcCC-CEEEEEEEcCCCeEEEEec
Confidence            689998  67999999999999999999999998874 6999999999999998 55554 9999999977 99999999


Q ss_pred             ccC
Q 040256          211 VAP  213 (228)
Q Consensus       211 vip  213 (228)
                      |||
T Consensus        80 ViP   82 (82)
T PF01357_consen   80 VIP   82 (82)
T ss_dssp             EE-
T ss_pred             ccC
Confidence            998

They are believed to act as a sort of chemical grease, allowing polymers to slide past one another by disrupting non-covalent hydrogen bonds that hold many wall polymers to one another. This process is not degradative and hence does not weaken the wall, which could otherwise rupture under internal pressure during growth. Sequence comparisons indicate at least four distinct expansin cDNAs in rice and at least six in Arabidopsis. The proteins are highly conserved in size and sequence (75-95% amino acid sequence similarity between any pairwise comparison), and phylogenetic trees indicate that this multigene family formed before the evolutionary divergence of monocotyledons and dicotyledons []. Sequence and motif analyses show no similarities to known functional domains that might account for expansin action on wall extension. It is thought that several highly-conserved tryptophans may function in expansin binding to cellulose, or other glycans. The high conservation of the family indicates that the mechanism by which expansins promote wall extensin tolerates little variation in protein structure. Grass pollens, such as pollen from timothy grass, represent a major cause of type I allergy []. Interestingly, expansins share a high degree of sequence similarity with the Lol p I family of allergens. This entry represents the C-terminal domain.; PDB: 2VXQ_A 1WHP_A 1BMW_A 1WHO_A 2HCZ_X 2JNZ_A 3FT9_A 3FT1_C 1N10_B.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.80  E-value=8.9e-20  Score=131.16  Aligned_cols=75  Identities=39%  Similarity=0.823  Sum_probs=61.2

Q ss_pred             EEEcChhccCCCCCCCceEEEEEeC-CCcc--ccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC
Q 040256           40 TAALSTALFNNGSTCGACFEIICVN-DPQW--CLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS  116 (228)
Q Consensus        40 ~aA~s~~~~~~g~~CG~C~~v~c~~-~~~~--C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~  116 (228)
                      +||++..+|++|.+||+||+++|.. ....  |..++++|+|+|+|+||+         |.  .+|||||+.||++|+.+
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~---------~~--~~~lDLS~~aF~~la~~   69 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPG---------CP--PNHLDLSPAAFKALADP   69 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TT---------SS--SSEEEEEHHHHHHTBST
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCC---------Cc--CCEEEeCHHHHHHhCCC
Confidence            5899999999999999999999932 2222  774214999999999996         87  58999999999999999


Q ss_pred             CCCeeeEEE
Q 040256          117 KAGIIPVRY  125 (228)
Q Consensus       117 ~~G~v~v~~  125 (228)
                      +.|+++|+|
T Consensus        70 ~~G~i~V~w   78 (78)
T PF03330_consen   70 DAGVIPVEW   78 (78)
T ss_dssp             TCSSEEEEE
T ss_pred             CceEEEEEC
Confidence            999999998

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=99.05  E-value=1e-10  Score=88.52  Aligned_cols=60  Identities=22%  Similarity=0.536  Sum_probs=43.7

Q ss_pred             CCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC----CCCCeeeEEE
Q 040256           50 NGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP----SKAGIIPVRY  125 (228)
Q Consensus        50 ~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~----~~~G~v~v~~  125 (228)
                      .-..||+|++|+-..      +|. +++|+|+|+|+.              ++|||.+.+|.+|-.    ...|.+.|.|
T Consensus        56 gq~~CGkClrVTNt~------tga-~~~~RIVDqCsn--------------GGLDld~~vF~~iDtdG~G~~~Ghl~V~y  114 (119)
T PF00967_consen   56 GQDSCGKCLRVTNTA------TGA-QVTVRIVDQCSN--------------GGLDLDPTVFNQIDTDGQGYAQGHLIVDY  114 (119)
T ss_dssp             SGGGTT-EEEEE-TT------T---EEEEEEEEE-SS--------------SSEES-SSSHHHH-SSSHHHHHTEEEEEE
T ss_pred             CcccccceEEEEecC------CCc-EEEEEEEEcCCC--------------CCcccChhHHhhhccCCcccccceEEEEE
Confidence            457899999999542      355 899999999984              689999999999953    3568999999


Q ss_pred             EEEEe
Q 040256          126 RRILC  130 (228)
Q Consensus       126 ~~V~C  130 (228)
                      ++|+|
T Consensus       115 ~fV~C  119 (119)
T PF00967_consen  115 EFVDC  119 (119)
T ss_dssp             EEE--
T ss_pred             EEEcC
Confidence            99998

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.31  E-value=3.6e-06  Score=65.02  Aligned_cols=66  Identities=21%  Similarity=0.424  Sum_probs=47.3

Q ss_pred             eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC--
Q 040256           39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP--  115 (228)
Q Consensus        39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~--  115 (228)
                      +|.+... +-| |+..||.|+|++-.        |+ +|.|..+|.-+               ..|+|+.+||+.|..  
T Consensus        44 ~IGg~~~V~gW-nS~~CGtC~~lty~--------g~-si~vlaID~a~---------------~gfnis~~A~n~LT~g~   98 (119)
T PF07249_consen   44 YIGGAPAVAGW-NSPNCGTCWKLTYN--------GR-SIYVLAIDHAG---------------GGFNISLDAMNDLTNGQ   98 (119)
T ss_dssp             SEEEETT--ST-T-TTTT-EEEEEET--------TE-EEEEEEEEE-S---------------SSEEE-HHHHHHHHTS-
T ss_pred             eeccccccccC-CCCCCCCeEEEEEC--------Ce-EEEEEEEecCC---------------CcccchHHHHHHhcCCc
Confidence            5555554 456 56799999999973        55 89999999854               469999999999976  


Q ss_pred             -CCCCeeeEEEEEEE
Q 040256          116 -SKAGIIPVRYRRIL  129 (228)
Q Consensus       116 -~~~G~v~v~~~~V~  129 (228)
                       ...|+|+++|++|+
T Consensus        99 a~~lG~V~a~~~qV~  113 (119)
T PF07249_consen   99 AVELGRVDATYTQVD  113 (119)
T ss_dssp             CCCC-EEE-EEEEE-
T ss_pred             ccceeEEEEEEEEcC
Confidence             46799999999996

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=97.88  E-value=0.00012  Score=62.52  Aligned_cols=59  Identities=19%  Similarity=0.250  Sum_probs=50.3

Q ss_pred             CceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEEEec
Q 040256           55 GACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCS  131 (228)
Q Consensus        55 G~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~  131 (228)
                      |.-.+|+..+      +|+ +|+|+|.|++|          +.. ...||||..|+++|+-...|+.+|+.+.+.+.
T Consensus       120 ~t~v~VtNl~------Ngr-svvVRINDRGP----------f~~-gRiIDlS~aAA~~l~~~~~G~a~V~i~~l~~~  178 (233)
T COG0797         120 PTYVRVTNLD------NGR-SVVVRINDRGP----------FVS-GRIIDLSKAAADKLGMIRSGVAKVRIEVLGVA  178 (233)
T ss_pred             CCEEEEEEcc------CCc-EEEEEEeCCCC----------CCC-CcEeEcCHHHHHHhCCccCceEEEEEEEeccc
Confidence            6678999664      355 99999999999          443 36899999999999999999999999999876

>TIGR00413 rlpA rare lipoprotein A

Probab=97.83  E-value=0.00025  Score=59.61  Aligned_cols=96  Identities=19%  Similarity=0.169  Sum_probs=67.6

Q ss_pred             eEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCC
Q 040256            8 AHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPN   87 (228)
Q Consensus         8 g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~   87 (228)
                      |.|+|||..-. | ..-|.|=.- +   ...++||-.+      ...|...+|+...      +|+ +|+|+|.|++|-.
T Consensus         1 G~ASwYg~~f~-G-~~TAnGe~y-~---~~~~tAAHkt------LPlgT~V~VtNl~------ngr-sviVrVnDRGPf~   61 (208)
T TIGR00413         1 GLASWYGPKFH-G-RKTANGEVY-N---MKALTAAHKT------LPFNTYVKVTNLH------NNR-SVIVRINDRGPFS   61 (208)
T ss_pred             CEEeEeCCCCC-C-CcCCCCeec-C---CCcccccccc------CCCCCEEEEEECC------CCC-EEEEEEeCCCCCC
Confidence            67999985311 0 123343211 1   1234544432      3679999999653      355 8999999999962


Q ss_pred             CCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEEEeccC
Q 040256           88 YTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQ  133 (228)
Q Consensus        88 ~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~  133 (228)
                                 +..-+|||..|+.+|+-...|+.+|+.+.+.....
T Consensus        62 -----------~gRiIDLS~aAA~~Lg~~~~G~a~V~vevl~~~~~   96 (208)
T TIGR00413        62 -----------DDRIIDLSHAAAREIGLISRGVGQVRIEVLHVAKN   96 (208)
T ss_pred             -----------CCCEEECCHHHHHHcCCCcCceEEEEEEEEecCCC
Confidence                       13689999999999999999999999999987653

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>PRK10672 rare lipoprotein A; Provisional

Probab=97.11  E-value=0.0066  Score=55.23  Aligned_cols=93  Identities=19%  Similarity=0.179  Sum_probs=61.4

Q ss_pred             eeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCC
Q 040256            6 EDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCP   85 (228)
Q Consensus         6 ~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp   85 (228)
                      ..|.|+|||..-.+  ..-|.|  ..+.  ...++||-.+      .--|...+|+..+      +|+ +|+|+|.|++|
T Consensus        79 ~~G~ASwYg~~f~G--~~TA~G--e~~~--~~~~tAAH~t------LPlps~vrVtNl~------ngr-svvVrVnDRGP  139 (361)
T PRK10672         79 QAGLAAIYDAEAGS--NLTASG--ERFD--PNALTAAHPT------LPIPSYVRVTNLA------NGR-MIVVRINDRGP  139 (361)
T ss_pred             eEEEEEEeCCccCC--CcCcCc--eeec--CCcCeeeccC------CCCCCEEEEEECC------CCc-EEEEEEeCCCC
Confidence            36999999964211  012222  1110  1235555443      2458899999653      355 99999999999


Q ss_pred             CCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEE
Q 040256           86 PNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRI  128 (228)
Q Consensus        86 ~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V  128 (228)
                      -.           +..-||||..|+.+|+-...+.|.|+.-.|
T Consensus       140 ~~-----------~gRiiDLS~aAA~~Lg~~~~~~V~ve~i~v  171 (361)
T PRK10672        140 YG-----------PGRVIDLSRAAADRLNTSNNTKVRIDPIIV  171 (361)
T ss_pred             CC-----------CCCeeEcCHHHHHHhCCCCCceEEEEEEee
Confidence            62           146899999999999887667777776666

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=93.47  E-value=0.068  Score=44.85  Aligned_cols=54  Identities=31%  Similarity=0.450  Sum_probs=31.6

Q ss_pred             EEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechh
Q 040256           40 TAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMP  108 (228)
Q Consensus        40 ~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~  108 (228)
                      +||.+-.-......|++|||++-++++.   .|+ ..+|+|++.=-+-           ..+||||..+
T Consensus        70 faA~~~~G~~e~~~Cc~Cy~LtFt~g~l---~GK-kmiVQ~tNtG~dl-----------g~n~FDl~iP  123 (201)
T PF02015_consen   70 FAAASITGGSESSWCCACYELTFTSGPL---KGK-KMIVQVTNTGGDL-----------GSNQFDLAIP  123 (201)
T ss_dssp             EEEEE-TT--HHHHTT-EEEEEE-SSTT---TT--EEEEEEEEE-TTT-----------TTTEEEEE-T
T ss_pred             eeeeeecCCCCCCcccceEEEEEcCCCc---CCC-EeEEEecccCCCC-----------CCCeEEEEeC
Confidence            3455422222336799999999886454   466 7999999975431           2479998764

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain

Probab=80.24  E-value=4.6  Score=29.95  Aligned_cols=48  Identities=17%  Similarity=0.351  Sum_probs=34.4

Q ss_pred             eEEEEEEcCCCceE----EcCCCCCCeEEeCCC---------CCCccEEEEEEecCCcEEE
Q 040256          160 VTAVQVKGSSTGWL----PMSRNWGQNWQTGTV---------LLGQGLSFQVTTSDGKTLQ  207 (228)
Q Consensus       160 I~~Vev~~~~~~w~----~m~r~~g~~W~~~~~---------~~g~p~~vRvT~~~G~~v~  207 (228)
                      -++|+|.++-..|.    +|.|...-.|++.-+         ..+..+.+||+..+|+++.
T Consensus        16 A~~V~l~GdFn~W~~~~~~m~k~~~G~W~~~i~~~~~~~~~~~~g~~Yky~i~~~~G~~~~   76 (99)
T cd02854          16 AEEVYLIGDFNNWDRNAHPLKKDEFGVWEITIPPNEDGSPAIPHGSKIKVRMVTPSGEWID   76 (99)
T ss_pred             CCEEEEEccCCCCCCcCcccEECCCCEEEEEECCcccccccCCCCCEEEEEEEeCCCCEEE
Confidence            35778876545675    488877778976422         2567999999998887754

Glycogen branching enzyme (AKA 1,4 alpha glucan branching enzyme) catalyzes the formation of alpha-1,6 branch points in either glycogen or starch by cleavage of the alpha-1,4 glucosidic linkage yielding a non-reducing end oligosaccharide chain and subsequent attachment to the alpha-1,6 position. By increasing the number of non-reducing ends glycogen is more reactive to synthesis and digestion as well as being more soluble. The N-terminus of the glycogen branching enzyme-like proteins may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobi

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	228
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		8e-22
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		6e-21

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 2   NGAWEDAHATFYGDMSGGETMQ--GACGYGDLKRQGYGLETAALSTALFNNGSTCGACFE 59
           NG W  A AT+YG  +G       GACG  ++    Y   TA  +  +F +G  CG+C+E
Sbjct: 16  NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYE 75
Query: 60  IICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP---- 115
           + C   P+ C     ++ IT  N+ P                HFDLS   F  LA     
Sbjct: 76  VRCKEKPE-CSGNPVTVYITDMNYEPIA------------PYHFDLSGKAFGSLAKPGLN 122
Query: 116 ---SKAGIIPVRYRRILCSKQGGVK----FEVKGNPNWTLVLVYNVGGAGDVTAVQVKGS 168
                 GI+ V +RR+ C    G K     E   NPN+  VLV  V   GD+  ++++  
Sbjct: 123 DKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDK 182
Query: 169 -STGWLPMSRNWGQNWQTGTVLLGQG-LSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRG 226
            S  W PM  +WG  W+  T    +G  S ++T+  GK +   +V P NW+    +    
Sbjct: 183 LSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNV 242
Query: 227 NF 228
            F
Sbjct: 243 QF 244

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score = 97.1 bits (240), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 5   WEDAHATFYGDMSGG--ETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIIC 62
           W DA +T+YG  +G   +   GACGY D+ +  +   T   +T +F +G  CG+CFEI C
Sbjct: 19  WLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC 78
Query: 63  VNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS------ 116
              P+ C      + IT  N  P                HFDLS   F  +A        
Sbjct: 79  TK-PEACSGEPVVVHITDDNEEPIA------------PYHFDLSGHAFGAMAKKGDEQKL 125
Query: 117 -KAGIIPVRYRRILCSKQGGVK--FEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGS-ST 170
             AG + +++RR+ C    G K  F V+   NPN+  +LV  V G GDV AV +K     
Sbjct: 126 RSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKD 185
Query: 171 GWLPMSRNWGQNWQTGTV-LLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
            W+ +  +WG  W+  T   L    + + TT  G   + ++V P  W+   +++ +
Sbjct: 186 KWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYESK 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	228
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	3e-69
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	6e-64
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	4e-57
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	7e-30
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	6e-29
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	7e-28
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	2e-25

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  211 bits (539), Expect = 3e-69
 Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 28/242 (11%)

Query: 2   NGAWEDAHATFYG--DMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFE 59
           NG W  A AT+YG  + +G     GACG  ++    Y   TA  +  +F +G  CG+C+E
Sbjct: 16  NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYE 75

Query: 60  IICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS--- 116
           + C   P+       ++ IT  N+ P                HFDLS   F  LA     
Sbjct: 76  VRCKEKPECSGNP-VTVYITDMNYEPIA------------PYHFDLSGKAFGSLAKPGLN 122

Query: 117 ----KAGIIPVRYRRILCSKQGGVKFEVK----GNPNWTLVLVYNVGGAGDVTAVQVKGS 168
                 GI+ V +RR+ C    G K         NPN+  VLV  V   GD+  ++++  
Sbjct: 123 DKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDK 182

Query: 169 STG-WLPMSRNWGQNWQ-TGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGRG 226
            +  W PM  +WG  W+      L    S ++T+  GK +   +V P NW+    +    
Sbjct: 183 LSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNV 242

Query: 227 NF 228
            F
Sbjct: 243 QF 244

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  198 bits (503), Expect = 6e-64
 Identities = 68/239 (28%), Positives = 103/239 (43%), Gaps = 28/239 (11%)

Query: 2   NGAWEDAHATFYGDMSGGETMQ--GACGYGDLKRQGYGLETAALSTALFNNGSTCGACFE 59
              W DA +T+YG  +G       GACGY D+ +  +   T   +T +F +G  CG+CFE
Sbjct: 16  GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFE 75

Query: 60  IICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS--- 116
           I C   P+ C      + IT  N  P                HFDLS   F  +A     
Sbjct: 76  IKC-TKPEACSGEPVVVHITDDNEEPIA------------PYHFDLSGHAFGAMAKKGDE 122

Query: 117 ----KAGIIPVRYRRILCSKQGG----VKFEVKGNPNWTLVLVYNVGGAGDVTAVQVK-G 167
                AG + +++RR+ C    G       E   NPN+  +LV  V G GDV AV +K  
Sbjct: 123 QKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEK 182

Query: 168 SSTGWLPMSRNWGQNWQ-TGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
               W+ +  +WG  W+      L    + + TT  G   + ++V P  W+   +++ +
Sbjct: 183 GKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYESK 241

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score =  179 bits (456), Expect = 4e-57
 Identities = 43/236 (18%), Positives = 75/236 (31%), Gaps = 42/236 (17%)

Query: 4   AWEDAH---ATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNGST----CGA 56
           A++D H   AT+ G         GA            +E  A++ A  N G       G+
Sbjct: 2   AYDDLHEGYATYTG----SGYSGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGS 54

Query: 57  CFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS 116
             E+             G   +  T+  P                  DLS   F K+   
Sbjct: 55  YLEVEGPK---------GKTTVYVTDLYPE---------GARG--ALDLSPNAFRKIGNM 94

Query: 117 KAGIIPVRYRRILCSKQGGVKFEVKG--NPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLP 174
           K G I +++R +     G   + +K   +  W  + V N      V  ++ +     W+ 
Sbjct: 95  KDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKYP--VMKMEYEKDGK-WIN 151

Query: 175 MSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQ--FDNVAPRNWQFGQTFQGRGNF 228
           M +    ++ +   L    L  ++T   GK ++     +         T  G   F
Sbjct: 152 MEKMDYNHFVSTN-LGTGSLKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQF 206

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense} Length = 108

 Score =  106 bits (266), Expect = 7e-30
 Identities = 18/104 (17%), Positives = 42/104 (40%), Gaps = 8/104 (7%)

Query: 125 YRRILCSKQGGVKFEVKG--NPNWTLVLVYNVGGAGDVTAVQVKGSSTG-WLPMSRNWGQ 181
           +      +   V F V+   +P   ++ +        +  V+++   +  W P+++  G 
Sbjct: 7   HHHGSAVQ---VTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GN 62

Query: 182 NWQTGTVLLGQG-LSFQVTTSDGKTLQFDNVAPRNWQFGQTFQG 224
            W+  +     G  +F+  +  G    FD V P  +  G+T++ 
Sbjct: 63  VWEVKSSKPLVGPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKP 106

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} PDB: 3ft9_A Length = 100

 Score =  103 bits (259), Expect = 6e-29
 Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 5/94 (5%)

Query: 136 VKFEVKG--NPNWTLVLVYNVGGAGDVTAVQVKGSSTG-WLPMSRNWGQNWQTGTVLLGQ 192
           V F V+   +P   ++ +        +  V+++   +  W P+++  G  W+  +     
Sbjct: 4   VTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLV 62

Query: 193 G-LSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR 225
           G  +F+  +  G    FD V P  +  G+T++  
Sbjct: 63  GPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKPE 96

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A Length = 96

 Score =  100 bits (251), Expect = 7e-28
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 136 VKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSSTG-WLPMSRNWGQNWQTGTVLLGQ 192
           V F V+   N     VLV   G    +  V+++   +  W+ M++  G  W   +    Q
Sbjct: 4   VTFTVEKGSNEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQ 61

Query: 193 G-LSFQVTTSDGKTLQFDNVAPRNWQFGQTFQG 224
           G  +F+  T  G    FD+V P  +  G T+  
Sbjct: 62  GPFNFRFLTEKGMKNVFDDVVPEKYTIGATYAP 94

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1 Length = 181

 Score = 97.3 bits (241), Expect = 2e-25
 Identities = 30/167 (17%), Positives = 41/167 (24%), Gaps = 24/167 (14%)

Query: 1   MNGAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNN------GSTC 54
                  A  T Y D   G    G            G   AA S   F++      G  C
Sbjct: 10  RYNGKSCASTTNYHDSHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHC 69

Query: 55  GACFEIICVNDPQWCLKGAG----SIKITATNFCPPNYTKTKDIWCNPPQK--------- 101
           G C ++           G      S     TN CP  Y      WCN   +         
Sbjct: 70  GQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQD--WCNQGSQYGGHNKYGY 127

Query: 102 --HFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNW 146
             H DL      ++           +  + C  +         N  +
Sbjct: 128 ELHLDL-ENGRSQVTGMGWNNPETTWEVVNCDSEHNHDHRTPSNSMY 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	228
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	100.0
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	100.0
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	99.97
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	99.95
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	99.92
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.68
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.28
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.21
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.1
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	98.03
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	98.03
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	97.97
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.96
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	95.2

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=1.5e-67  Score=453.08  Aligned_cols=213  Identities=31%  Similarity=0.629  Sum_probs=197.7

Q ss_pred             CCCceeeEEEEecCCCCCCC--CccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEE
Q 040256            2 NGAWEDAHATFYGDMSGGET--MQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKIT   79 (228)
Q Consensus         2 ~~~w~~g~aT~Yg~~~~~g~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~   79 (228)
                      +++|+.|+||||++++++|+  ++|||||++++..+++.++||+|+++|++|++||+||||+|.+ +..|++ + +|+|+
T Consensus        16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~-~~~C~~-~-sv~V~   92 (245)
T 2hcz_X           16 NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE-KPECSG-N-PVTVY   92 (245)
T ss_dssp             CCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS-SSSBCS-S-CEEEE
T ss_pred             CCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC-CCccCC-C-CEEEE
Confidence            36899999999999988887  7999999998888899999999999999999999999999985 446984 4 79999


Q ss_pred             EecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-------CCCCeeeEEEEEEEeccCC--ceEEEEc--CCCceEE
Q 040256           80 ATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-------SKAGIIPVRYRRILCSKQG--GVKFEVK--GNPNWTL  148 (228)
Q Consensus        80 V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-------~~~G~v~v~~~~V~C~~~g--~i~~~v~--s~~~w~a  148 (228)
                      |||+||          |+++++|||||+.||.+||.       ++.|+|+|+||||+|+++|  +|+|+|+  |++||++
T Consensus        93 VtD~C~----------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~a  162 (245)
T 2hcz_X           93 ITDMNY----------EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLA  162 (245)
T ss_dssp             EEEECC----------CTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCCC
T ss_pred             EEeccC----------CCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceEE
Confidence            999998          65557999999999999999       7899999999999999984  6999999  7999999


Q ss_pred             EEEEeeCCCcceEEEEEEcCC-CceEEcCCCCCCeEEeCCC--CCCccEEEEEEecCCcEEEEccccCCCCCCCeEEecc
Q 040256          149 VLVYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQNWQTGTV--LLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR  225 (228)
Q Consensus       149 v~v~n~~G~~~I~~Vev~~~~-~~w~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~y~~~  225 (228)
                      |+|+|++|+++|++|||++++ +.|++|+|+|||+|++++.  |.+ ||+||||+.+|++|+++||||++|++|++|+++
T Consensus       163 vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~~  241 (245)
T 2hcz_X          163 VLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYTSN  241 (245)
T ss_dssp             EEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEEECS
T ss_pred             EEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEEeCc
Confidence            999999999999999999987 4899999999999999874  667 999999999999999999999999999999999


Q ss_pred             cCC
Q 040256          226 GNF  228 (228)
Q Consensus       226 vqf  228 (228)
                      +||
T Consensus       242 ~qf  244 (245)
T 2hcz_X          242 VQF  244 (245)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            998

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=1.2e-66  Score=446.24  Aligned_cols=210  Identities=32%  Similarity=0.654  Sum_probs=187.3

Q ss_pred             CCCceeeEEEEecCCCCCCC--CccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEE
Q 040256            2 NGAWEDAHATFYGDMSGGET--MQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKIT   79 (228)
Q Consensus         2 ~~~w~~g~aT~Yg~~~~~g~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~   79 (228)
                      +++|+.|+||||++++++|+  ++|||||++++..+++.++||+|+++|++|++||+||||+|.++ ..|++ + +|+|+
T Consensus        16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~-~~C~~-~-~v~V~   92 (241)
T 1n10_A           16 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKP-EACSG-E-PVVVH   92 (241)
T ss_dssp             CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSS-TTBCS-C-CEEEE
T ss_pred             cCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCC-CccCC-C-CEEEE
Confidence            46899999999999988787  89999999988889999999999999999999999999999854 46985 3 79999


Q ss_pred             EecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-------CCCCeeeEEEEEEEeccCC--ceEEEEc--CCCceEE
Q 040256           80 ATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-------SKAGIIPVRYRRILCSKQG--GVKFEVK--GNPNWTL  148 (228)
Q Consensus        80 V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-------~~~G~v~v~~~~V~C~~~g--~i~~~v~--s~~~w~a  148 (228)
                      |||+|+          |++++.|||||+.||.+||.       ++.|+|+|+||||+|+++|  +|+|+|+  |++||++
T Consensus        93 VtD~C~----------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~~  162 (241)
T 1n10_A           93 ITDDNE----------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLA  162 (241)
T ss_dssp             EEEECS----------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEEE
T ss_pred             EeEecC----------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceEE
Confidence            999996          86668999999999999999       6899999999999999984  7999999  7999999


Q ss_pred             EEEEeeCCCcceEEEEEEcCC-CceEEcCCCCCCeEEeCCC--CCCccEEEEEEecCCcEEEEccccCCCCCCCeEEecc
Q 040256          149 VLVYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQNWQTGTV--LLGQGLSFQVTTSDGKTLQFDNVAPRNWQFGQTFQGR  225 (228)
Q Consensus       149 v~v~n~~G~~~I~~Vev~~~~-~~w~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~y~~~  225 (228)
                      |+|+|++|.++|++|||++++ +.|++|+|+|||+|++++.  |.+ ||+||||+.+|++|+++||||++|++|+||+++
T Consensus       163 vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~~  241 (241)
T 1n10_A          163 LLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYESK  241 (241)
T ss_dssp             EEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEEEEC-
T ss_pred             EEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCEEeCC
Confidence            999999999999999999987 5899999999999999874  667 999999999999999999999999999999974

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=100.00  E-value=3.2e-55  Score=368.89  Aligned_cols=193  Identities=21%  Similarity=0.297  Sum_probs=174.2

Q ss_pred             CCceeeEEEEecCCCCCCCCccccCCCCCCCCCCCCeEEEcChhccCCC----CCCCceEEEEEeCCCccccCCCceEEE
Q 040256            3 GAWEDAHATFYGDMSGGETMQGACGYGDLKRQGYGLETAALSTALFNNG----STCGACFEIICVNDPQWCLKGAGSIKI   78 (228)
Q Consensus         3 ~~w~~g~aT~Yg~~~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~~v~c~~~~~~C~~g~~sv~v   78 (228)
                      ++.+.|+||||+...    .+||||+..   .+++.++||+|+.+|++|    +.||+||||+|.        ++ +|+|
T Consensus         4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~--------~g-sv~V   67 (208)
T 3d30_A            4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP--------KG-KTTV   67 (208)
T ss_dssp             TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET--------TE-EEEE
T ss_pred             CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC--------CC-cEEE
Confidence            356899999999753    489999864   356789999999999987    899999999983        23 7999


Q ss_pred             EEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEEEeccCCceEEEEc--CCCceEEEEEEeeCC
Q 040256           79 TATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVK--GNPNWTLVLVYNVGG  156 (228)
Q Consensus        79 ~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~i~~~v~--s~~~w~av~v~n~~G  156 (228)
                      +|+|+||+         |.  ..|||||+.||.+||.++.|+++|+||+|+|+++|+|+|+++  |++||++|+|+|++ 
T Consensus        68 ~v~D~CP~---------C~--~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~-  135 (208)
T 3d30_A           68 YVTDLYPE---------GA--RGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHK-  135 (208)
T ss_dssp             EEEEECTT---------CC--TTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCS-
T ss_pred             EEEECCCC---------CC--CCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecC-
Confidence            99999996         95  589999999999999999999999999999999999999999  89999999999999 


Q ss_pred             CcceEEEEEEcCCCceEEcCCCCCCeEEeCCCCCCccEEEEEEecCCcEEEEccccCCCCCC----CeEEecccCC
Q 040256          157 AGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQGLSFQVTTSDGKTLQFDNVAPRNWQF----GQTFQGRGNF  228 (228)
Q Consensus       157 ~~~I~~Vev~~~~~~w~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~----g~~y~~~vqf  228 (228)
                       ++|++|||+++ +.|++|+|+|+|+|..+. +.++||+||||+.+|++|  .+|||++|++    +.+|++++||
T Consensus       136 -g~v~~v~i~~~-~~W~~m~r~~~n~~~~~~-~~~~pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf  206 (208)
T 3d30_A          136 -YPVMKMEYEKD-GKWINMEKMDYNHFVSTN-LGTGSLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQF  206 (208)
T ss_dssp             -SCEEEEEEEET-TEEEEEEECTTSCEEEEC-CCSSSEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCC
T ss_pred             -CCEEEEEEecC-CcEEEccccccceeecCC-CCCCCEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCcc
Confidence             59999999987 589999999999887765 445599999999999999  7999999997    8999999998

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=100.00  E-value=2.7e-34  Score=232.30  Aligned_cols=125  Identities=26%  Similarity=0.405  Sum_probs=106.0

Q ss_pred             CCceeeEEEEecCCCCCCCCccccCCC-----CCCCCCCCCeEEEcChhccCCC------CCCCceEEEEEeCCC-----
Q 040256            3 GAWEDAHATFYGDMSGGETMQGACGYG-----DLKRQGYGLETAALSTALFNNG------STCGACFEIICVNDP-----   66 (228)
Q Consensus         3 ~~w~~g~aT~Yg~~~~~g~~~GaCgy~-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~~v~c~~~~-----   66 (228)
                      .+|+.++||||++.     ++|||||+     ++++++|+.++||||++||++|      ++||+||||+|++++     
T Consensus        12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg   86 (181)
T 1wc2_A           12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (181)
T ss_dssp             TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence            36999999999975     58999999     6677788999999999999997      899999999998544     


Q ss_pred             ccccCCCceEEEEEecCCCCCCCCCCCcCCCCC-----------CCceeechhHHhhccCCCCCeeeEEEEEEEeccCCc
Q 040256           67 QWCLKGAGSIKITATNFCPPNYTKTKDIWCNPP-----------QKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGG  135 (228)
Q Consensus        67 ~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~-----------~~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~  135 (228)
                      .+|.+|+ +|+|+|||+||.+.  .+..||.++           +.||||+..| .+||....|+++|+||||+|+..++
T Consensus        87 ~~~~~g~-SI~VtaTN~CPpn~--~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~~~  162 (181)
T 1wc2_A           87 GPVREGL-SKTFMITNLCPNIY--PNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSEHN  162 (181)
T ss_dssp             CCCCTTC-EEEEEEEEEECSST--TSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHHHH
T ss_pred             ccCCCCC-eEEEEEecCCCCCC--CCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCCCC
Confidence            3455666 89999999999642  345699753           6899999999 8999989999999999999987544


Q ss_pred             e
Q 040256          136 V  136 (228)
Q Consensus       136 i  136 (228)
                      +
T Consensus       163 ~  163 (181)
T 1wc2_A          163 H  163 (181)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A

Probab=99.97  E-value=1.6e-30  Score=193.90  Aligned_cols=93  Identities=20%  Similarity=0.474  Sum_probs=88.2

Q ss_pred             CceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcCCC-ceEEcCCCCCCeEEeCC--CCCCccEEEEEEecCCcEEEE
Q 040256          134 GGVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSST-GWLPMSRNWGQNWQTGT--VLLGQGLSFQVTTSDGKTLQF  208 (228)
Q Consensus       134 g~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~~~-~w~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~  208 (228)
                      .+|+|+|+  |++||++|+|.|++|+++|.+||||++++ .|++|+| ||++|++++  +|++ ||+||||+.+|+++++
T Consensus         2 ~~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~   79 (100)
T 3ft1_A            2 VQVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVF   79 (100)
T ss_dssp             BEEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEE
T ss_pred             CCEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEE
Confidence            36999999  79999999999999999999999999885 7999999 999999986  6778 9999999999999999


Q ss_pred             ccccCCCCCCCeEEecccCC
Q 040256          209 DNVAPRNWQFGQTFQGRGNF  228 (228)
Q Consensus       209 ~~vip~~w~~g~~y~~~vqf  228 (228)
                      +||||++|++|+||+++|||
T Consensus        80 ~nViPa~W~~G~ty~s~vq~   99 (100)
T 3ft1_A           80 DEVIPTAFSIGKTYKPEEQE   99 (100)
T ss_dssp             EEEECTTCCTTCEECCCCBC
T ss_pred             CeEeCCCCCCCcEEeccccc
Confidence            99999999999999999997

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}

Probab=99.95  E-value=4.1e-28  Score=182.82  Aligned_cols=90  Identities=22%  Similarity=0.532  Sum_probs=84.5

Q ss_pred             ceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEc-CCCceEEcCCCCCCeEEeCC--CCCCccEEEEEEecCCcEEEEc
Q 040256          135 GVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKG-SSTGWLPMSRNWGQNWQTGT--VLLGQGLSFQVTTSDGKTLQFD  209 (228)
Q Consensus       135 ~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~-~~~~w~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~  209 (228)
                      +|.|+|+  |++||++|+|.|++|+++|.+||||+ +.+.|++|+|+ |++|++++  +|.+ ||+||||+.+|++++++
T Consensus        14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~   91 (108)
T 2jnz_A           14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD   91 (108)
T ss_dssp             EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred             cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence            7999998  89999999999999999999999997 44689999999 99999986  6788 99999999999999999


Q ss_pred             cccCCCCCCCeEEeccc
Q 040256          210 NVAPRNWQFGQTFQGRG  226 (228)
Q Consensus       210 ~vip~~w~~g~~y~~~v  226 (228)
                      ||||++|+||+||++.+
T Consensus        92 nViPa~W~~Gqty~s~v  108 (108)
T 2jnz_A           92 EVIPTAFSIGKTYKPEE  108 (108)
T ss_dssp             EEECSSCCTTCEECCCC
T ss_pred             eEECCCCCCCCEEeCCC
Confidence            99999999999999875

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A

Probab=99.92  E-value=1.1e-27  Score=177.48  Aligned_cols=89  Identities=28%  Similarity=0.526  Sum_probs=82.0

Q ss_pred             ceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcC-CCceEEcCCCCCCeEEeCC--CCCCccEEEEEEecCCcEEEEc
Q 040256          135 GVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGS-STGWLPMSRNWGQNWQTGT--VLLGQGLSFQVTTSDGKTLQFD  209 (228)
Q Consensus       135 ~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~-~~~w~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~  209 (228)
                      +|+|+|+  |++||++|+|.|++  ++|.+||||++ .+.|++|+|+||++|++++  +|+| ||+||||+.+|++++++
T Consensus         3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~   79 (96)
T 1bmw_A            3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD   79 (96)
T ss_dssp             CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred             CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence            6899999  89999999999998  99999999995 4689999999999999987  5778 99999999999999999


Q ss_pred             cccCCCCCCCeEEeccc
Q 040256          210 NVAPRNWQFGQTFQGRG  226 (228)
Q Consensus       210 ~vip~~w~~g~~y~~~v  226 (228)
                      ||||++|++|+||++++
T Consensus        80 nViP~~W~~G~ty~~~~   96 (96)
T 1bmw_A           80 DVVPEKYTIGATYAPEE   96 (96)
T ss_dssp             SCSCSSCCSSSCCCC--
T ss_pred             eEeCCCCCCCCEEeCCC
Confidence            99999999999999864

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.68  E-value=1.6e-17  Score=127.64  Aligned_cols=62  Identities=24%  Similarity=0.532  Sum_probs=54.8

Q ss_pred             CCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeec-hhHHhhccC----CCCCeeeE
Q 040256           49 NNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLS-MPMFVKLAP----SKAGIIPV  123 (228)
Q Consensus        49 ~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs-~~aF~~la~----~~~G~v~v  123 (228)
                      ++++.||+|++|++..      +|+ +|+|+|+|+||.         |     +|||| ++||++|+.    +..|+++|
T Consensus        58 ~~g~~CG~cv~Vtn~~------nGk-sV~V~VvD~CP~---------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V  116 (125)
T 1bw3_A           58 RGQAACGKCLRVTNPA------TGA-QITARIVDQCAN---------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNV  116 (125)
T ss_dssp             CSGGGTTCEEEEEETT------TTE-EEEEEEEECCSS---------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred             CCCcccCCEEEeEeCC------CCC-EEEEEEEEeCCC---------C-----CCCCCCHHHHHHHhccCCcccCcEEEE
Confidence            6789999999999752      254 999999999995         3     49999 999999998    67899999


Q ss_pred             EEEEEEec
Q 040256          124 RYRRILCS  131 (228)
Q Consensus       124 ~~~~V~C~  131 (228)
                      +|++|+|+
T Consensus       117 ~w~~V~C~  124 (125)
T 1bw3_A          117 NYQFVDCR  124 (125)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEeCC
Confidence            99999996

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.28  E-value=3.9e-11  Score=87.92  Aligned_cols=92  Identities=23%  Similarity=0.304  Sum_probs=72.5

Q ss_pred             eeeEEEEecCC-CCCCCCccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCC
Q 040256            6 EDAHATFYGDM-SGGETMQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFC   84 (228)
Q Consensus         6 ~~g~aT~Yg~~-~~~g~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~C   84 (228)
                      ..|.|+|||.. .+   ...|||=-..    ...++||-.+      ..||...+|+...      +|+ +|+|+|.|+|
T Consensus         2 ~~G~ASwYg~~f~G---~~TA~Ge~~~----~~~~tAAH~t------lP~gt~vrVtNl~------nGk-sVvVrVnDRG   61 (95)
T 4avr_A            2 DTGEASYYGSRHAG---LRTASGERYN----PNAMTAAHRT------LPFGARVRVTNLD------NRR-SVVVRINDRG   61 (95)
T ss_dssp             EEEEEEECCGGGTT---SBCTTSCBCC----TTSCEEECSS------SCTTCEEEEEETT------TCC-EEEEEEEECC
T ss_pred             CEEEEEEECCccCC---CCCCCccCcC----CCCCEEEcCC------CCCCcEEEEEECC------CCc-EEEEEEccCC
Confidence            47999999964 22   3578874321    2357888763      4799999999653      355 9999999999


Q ss_pred             CCCCCCCCCcCCCCCCCceeechhHHhhccCCCCCeeeEEEEEE
Q 040256           85 PPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSKAGIIPVRYRRI  128 (228)
Q Consensus        85 p~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~~G~v~v~~~~V  128 (228)
                      |.         |.  ...||||..||.+|+....|+.+|+|+.+
T Consensus        62 P~---------~~--griIDLS~aAa~~Lg~~~~G~~~V~ve~~   94 (95)
T 4avr_A           62 PF---------RR--GRIIDVSRKAAEGLGMIRSGVAPVRIESL   94 (95)
T ss_dssp             CC---------ST--TEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred             CC---------CC--CCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence            95         66  36899999999999999999999999976

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.21  E-value=3.4e-06  Score=64.60  Aligned_cols=67  Identities=24%  Similarity=0.485  Sum_probs=54.4

Q ss_pred             eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-C
Q 040256           39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-S  116 (228)
Q Consensus        39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-~  116 (228)
                      +|.+... +-|+ +..||.|++|+-.       +|+ +|.|+.+|.-+               ..|+++.+||+.|.. .
T Consensus        51 ~IGga~~iagWN-S~~CGtC~~lty~-------ng~-sI~vlaID~A~---------------~gFnIs~~Amn~LT~G~  106 (129)
T 2kqa_A           51 NVGGIPDIAGWD-SPSCGTCWKVTIP-------NGN-SIFIRGVDSGR---------------GGFNVNPTAFTKLVGST  106 (129)
T ss_dssp             SEEEETTCCSTT-CTTCSCEEEEEET-------TTE-EEEEEEEEECS---------------SSEEECHHHHHHHHSSS
T ss_pred             eeccchhhccCC-CCCCCceEEEEEc-------CCC-EEEEEEEccCC---------------CceeehHHHHHHhcCCc
Confidence            4544444 4566 7999999999973       155 89999999876               369999999999977 6


Q ss_pred             CCCee-eEEEEEEE
Q 040256          117 KAGII-PVRYRRIL  129 (228)
Q Consensus       117 ~~G~v-~v~~~~V~  129 (228)
                      ..|+| +++|++|+
T Consensus       107 ~lG~V~~a~~~qV~  120 (129)
T 2kqa_A          107 EAGRVDNVNYVQVD  120 (129)
T ss_dssp             SSCCBCSCEEEECC
T ss_pred             ccCcEeEEEEEEcC
Confidence            77999 99999996

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.10  E-value=4.3e-06  Score=63.49  Aligned_cols=66  Identities=17%  Similarity=0.408  Sum_probs=52.0

Q ss_pred             eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccC-C
Q 040256           39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAP-S  116 (228)
Q Consensus        39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~-~  116 (228)
                      +|.+... +-|+ +..||.|+|++-.        |+ +|.|..+|.-+               ..|+|+.+||+.|.. .
T Consensus        45 ~IGg~~~i~gwn-s~~CGtC~~lty~--------g~-si~vlaID~a~---------------~Gfnis~~A~n~LT~G~   99 (120)
T 3m3g_A           45 YIGGAAAVAGWN-SASCGTCWKLQYS--------GH-TIYVLAVDHAA---------------SGFNIALDAMNALTGGQ   99 (120)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEET--------TE-EEEEEEEEECS---------------SSEEECHHHHHHHHTSC
T ss_pred             ccccccccccCC-CCCCCceEEEEEC--------Ce-EEEEEEEecCC---------------CceeecHHHHHHhhCCc
Confidence            4444443 4454 5899999999974        55 89999999876               459999999999975 2


Q ss_pred             --CCCeeeEEEEEEE
Q 040256          117 --KAGIIPVRYRRIL  129 (228)
Q Consensus       117 --~~G~v~v~~~~V~  129 (228)
                        ..|+|++++++|+
T Consensus       100 a~~lG~V~a~~~~V~  114 (120)
T 3m3g_A          100 AVQLGRVSATATQVP  114 (120)
T ss_dssp             HHHHCEEECEEEEEC
T ss_pred             ceeeeeEeEEEEEcC
Confidence              3499999999997

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.03  E-value=4.9e-06  Score=63.79  Aligned_cols=71  Identities=21%  Similarity=0.365  Sum_probs=52.1

Q ss_pred             eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC-
Q 040256           39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS-  116 (228)
Q Consensus        39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~-  116 (228)
                      +|.+... .-|+ ...||.|+|++..+ +.   ...++|.|..+|.-+               ..|+|+.+||+.|.+. 
T Consensus        45 ~IGg~~~i~gwn-s~~CGtC~~lty~g-~~---~~~~si~vlaID~a~---------------~Gfnis~~Amn~LT~g~  104 (127)
T 3suj_A           45 CIGGSSDIAGYN-SPNCGSCYQLTYSS-AH---TTPKSIYMVAIDRSA---------------EGFTASKQAMDDLTNKR  104 (127)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEECC-SS---SCCEEEEEEEEEECS---------------SSEEECHHHHHHHHTSC
T ss_pred             eeccccccccCC-CCCCCceEEEEECC-CC---CcceEEEEEEEecCC---------------CceeecHHHHHHhcCCc
Confidence            3444332 3454 58999999999852 11   011389999999876               3599999999999753 


Q ss_pred             --CCCeeeEEEEEEE
Q 040256          117 --KAGIIPVRYRRIL  129 (228)
Q Consensus       117 --~~G~v~v~~~~V~  129 (228)
                        ..|+|+++|++|+
T Consensus       105 a~~lG~V~~~~~~V~  119 (127)
T 3suj_A          105 AEELGTVNVDVRKVD  119 (127)
T ss_dssp             HHHHSSEEEEEEEEC
T ss_pred             cccceeEEEEEEEeC
Confidence              3489999999997

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.03  E-value=4.7e-06  Score=63.74  Aligned_cols=70  Identities=23%  Similarity=0.381  Sum_probs=52.9

Q ss_pred             eEEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC-
Q 040256           39 ETAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS-  116 (228)
Q Consensus        39 ~~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~-  116 (228)
                      +|.+... .-|+ +..||.|+|++-. +|.    .+++|.|..+|.-+               ..|+|+.+||+.|.+- 
T Consensus        46 ~IGg~~~i~gwn-S~~CGtC~~lty~-g~~----~~~si~vlaID~a~---------------~Gfnis~~Amn~LT~G~  104 (125)
T 3suk_A           46 HIGASSDIGGFN-SPACGNCYTISFT-FQG----VTRSINLVAIDHAG---------------NGFNVAQAAMDELTNGN  104 (125)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEEE-ETT----EEEEEEEEEEEECS---------------SSEEECHHHHHHHHTSC
T ss_pred             eeccccccccCC-CCCCCeeEEEEEc-CCC----cceEEEEEEEecCC---------------CceeecHHHHHHhcCCc
Confidence            3444443 4465 5899999999986 221    22389999999876               3599999999999762 


Q ss_pred             --CCCeeeEEEEEEE
Q 040256          117 --KAGIIPVRYRRIL  129 (228)
Q Consensus       117 --~~G~v~v~~~~V~  129 (228)
                        ..|+|+++|++|+
T Consensus       105 a~~lG~V~~~~~~V~  119 (125)
T 3suk_A          105 AVALGTIDVQSQQVA  119 (125)
T ss_dssp             HHHHCEEEEEEEEEC
T ss_pred             ccccceEeEEEEEcC
Confidence              3499999999997

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=97.97  E-value=1.2e-05  Score=61.27  Aligned_cols=67  Identities=21%  Similarity=0.422  Sum_probs=52.7

Q ss_pred             EEEcCh-hccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC--
Q 040256           40 TAALST-ALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS--  116 (228)
Q Consensus        40 ~aA~s~-~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~--  116 (228)
                      |.+... +-|++ ..||.|+|++...      .|+ +|.|..+|.-+               ..|+|+.+||+.|..-  
T Consensus        46 IGg~~~V~gwnS-~~CGtC~~lty~~------~g~-si~vlaID~a~---------------~Gfnis~~Amn~LT~G~a  102 (122)
T 3sul_A           46 VGAVDTITGWNS-ESCGTCYQITWSG------TGK-TIHVVGVDVAG---------------NGFNVGQRAMDDLTNGQA  102 (122)
T ss_dssp             EEEETTCCSTTC-TTTTCEEEEEETT------TTE-EEEEEEEEECS---------------SSEEECHHHHHHHHTSCH
T ss_pred             cccccccccCCC-CCCCceEEEEEcC------CCc-EEEEEEEecCC---------------CceeehHHHHHHhcCCcc
Confidence            554444 45655 9999999999741      144 89999999876               3599999999999752  


Q ss_pred             -CCCeeeEEEEEEE
Q 040256          117 -KAGIIPVRYRRIL  129 (228)
Q Consensus       117 -~~G~v~v~~~~V~  129 (228)
                       ..|+|++++++|+
T Consensus       103 ~~lG~V~a~~~qV~  116 (122)
T 3sul_A          103 VALGNIDVTATLVD  116 (122)
T ss_dssp             HHHSEEEEEEEEEC
T ss_pred             eecceEeEEEEEcC
Confidence             3499999999997

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.96  E-value=2.3e-05  Score=60.41  Aligned_cols=65  Identities=14%  Similarity=0.193  Sum_probs=51.6

Q ss_pred             eEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCCC-
Q 040256           39 ETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPSK-  117 (228)
Q Consensus        39 ~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~~-  117 (228)
                      +|.+..   | +...||.|+||+..        |+ +|.|..+|.-.+             ..-|||+.+||+.|..-. 
T Consensus        49 ~igg~~---w-ns~~CGtCwkLtY~--------G~-sI~vlaID~a~~-------------g~~FnIs~~Amn~LT~G~~  102 (136)
T 3sum_A           49 HFVAAP---E-AQTECGSCWKLRYK--------GN-HAFVTVVDRVEE-------------ANLFVGGTDLVKNLTTFNG  102 (136)
T ss_dssp             SEEECC---B-TTBCTTCEEEEEET--------TE-EEEEEEEECCCS-------------TTEEEECHHHHHHHTCBTT
T ss_pred             cccccc---c-CCCCCCceEEEEEC--------Ce-EEEEEEEecCCC-------------cceEeehHHHHHHHhCCCc
Confidence            455555   4 56899999999974        55 899999998763             123999999999997532 


Q ss_pred             ------CCeeeE-EEEEEE
Q 040256          118 ------AGIIPV-RYRRIL  129 (228)
Q Consensus       118 ------~G~v~v-~~~~V~  129 (228)
                            .|+|++ +|++|+
T Consensus       103 a~~a~elG~Vda~~~~qVd  121 (136)
T 3sum_A          103 APEGYDWGTAQLFSAYQVD  121 (136)
T ss_dssp             BCHHHHHSEEECSEEEEEC
T ss_pred             cccceecceeeeeEEEEcC
Confidence                  489999 999997

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=95.20  E-value=0.0085  Score=49.21  Aligned_cols=53  Identities=30%  Similarity=0.454  Sum_probs=34.1

Q ss_pred             EEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeech
Q 040256           40 TAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSM  107 (228)
Q Consensus        40 ~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~  107 (228)
                      +||.+-.--.....|++|||++-++++.   .|+ +.+|+||+...+-         .  .+||||..
T Consensus        72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~~---~GK-kmiVQ~TNtG~Dl---------~--~n~FDl~i  124 (210)
T 2eng_A           72 FAATSIAGSNEAGWCCACYELTFTSGPV---AGK-KMVVQSTSTGGDL---------G--SNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGGG---TTC-EEEEEEEEC----------------CCEEEEEC
T ss_pred             eeeeeccCCccccccceeEEEEEcCCCc---CCC-EEEEEEecccCCC---------C--CCceeEec
Confidence            4555522112236799999999886542   376 7999999998652         1  48999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	228
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	4e-45
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	6e-38
d1n10a1	95	b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {T	3e-34
d1whoa_	94	b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum praten	5e-30

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score =  146 bits (370), Expect = 4e-45
 Identities = 33/170 (19%), Positives = 44/170 (25%), Gaps = 34/170 (20%)

Query: 3   GAWEDAHATFYGDMSGGETMQGACGYGDL-----KRQGYGLETAALSTALFNN------G 51
                A  T Y D   G     ACG G            G   AA S   F++      G
Sbjct: 12  NGKSCASTTNYHDSHKG-----ACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCG 66

Query: 52  STCGACFEIICVNDPQWCLKG----AGSIKITATNFCPPNYTKTKDIWCNPP-------- 99
             CG C ++           G      S     TN CP  Y      WCN          
Sbjct: 67  QHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQD--WCNQGSQYGGHNK 124

Query: 100 ---QKHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGGVKFEVKGNPNW 146
              + H DL      ++           +  + C  +         N  +
Sbjct: 125 YGYELHLDL-ENGRSQVTGMGWNNPETTWEVVNCDSEHNHDHRTPSNSMY 173

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  127 bits (319), Expect = 6e-38
 Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 22/143 (15%)

Query: 2   NGAWEDAHATFYGDMSGGETMQ--GACGYGDLKRQGYGLETAALSTALFNNGSTCGACFE 59
              W DA +T+YG  +G       GACGY D+ +  +   T   +T +F +G  CG+CFE
Sbjct: 14  GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFE 73

Query: 60  IICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS--- 116
           I C   P+ C      + IT  N  P                HFDLS   F  +A     
Sbjct: 74  IKC-TKPEACSGEPVVVHITDDNEEPIA------------PYHFDLSGHAFGAMAKKGDE 120

Query: 117 ----KAGIIPVRYRRILCSKQGG 135
                AG + +++RR+ C    G
Sbjct: 121 QKLRSAGELELQFRRVKCKYPEG 143

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 95

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  115 bits (291), Expect = 3e-34
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 136 VKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSSTG-WLPMSRNWGQNWQTGTVLLGQ 192
           V F V+   NPN+  +LV  V G GDV AV +K      W+ +  +WG  W+  T     
Sbjct: 3   VTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLT 62

Query: 193 G-LSFQVTTSDGKTLQFDNVAPRNWQFGQTFQ 223
           G  + + TT  G   + ++V P  W+   +++
Sbjct: 63  GPFTVRYTTEGGTKTEAEDVIPEGWKADTSYE 94

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 94

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  105 bits (263), Expect = 5e-30
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 4/91 (4%)

Query: 136 VKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSSTGWLPMSRNWGQNWQTGTVLLGQG 193
           V F V+   N     VLV   G       ++  GS   W+ M++  G  W   +    QG
Sbjct: 4   VTFTVEKGSNEKHLAVLVKYEGDTMAEVELREHGSDE-WVAMTKGEGGVWTFDSEEPLQG 62

Query: 194 -LSFQVTTSDGKTLQFDNVAPRNWQFGQTFQ 223
             +F+  T  G    FD+V P  +  G T+ 
Sbjct: 63  PFNFRFLTEKGMKNVFDDVVPEKYTIGATYA 93

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	228
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	100.0
d1n10a1	95	PHL P 1 C-terminal domain {Timothy grass (Phleum p	99.96
d1whoa_	94	PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 1	99.94
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.66
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	94.51

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=6.3e-38  Score=247.11  Aligned_cols=121  Identities=33%  Similarity=0.659  Sum_probs=101.4

Q ss_pred             CCCceeeEEEEecCCCCCCC--CccccCCCCCCCCCCCCeEEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEE
Q 040256            2 NGAWEDAHATFYGDMSGGET--MQGACGYGDLKRQGYGLETAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKIT   79 (228)
Q Consensus         2 ~~~w~~g~aT~Yg~~~~~g~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~   79 (228)
                      .++|++|+||||+++++.++  .+|||||++++..+++.++||+|+++|++|..||+||||+|. ++..|.. + +|+|+
T Consensus        14 ~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~-~~~~c~~-~-sv~V~   90 (143)
T d1n10a2          14 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCT-KPEACSG-E-PVVVH   90 (143)
T ss_dssp             CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEEC-SSTTBCS-C-CEEEE
T ss_pred             CCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcC-CCCcccC-C-CEEEE
Confidence            36899999999999887664  379999999988889999999999999999999999999998 4678984 4 79999


Q ss_pred             EecCCCCCCCCCCCcCCCCCCCceeechhHHhhccCC-------CCCeeeEEEEEEEeccCCc
Q 040256           80 ATNFCPPNYTKTKDIWCNPPQKHFDLSMPMFVKLAPS-------KAGIIPVRYRRILCSKQGG  135 (228)
Q Consensus        80 V~D~Cp~~~~~~~~~~C~~~~~~~DLs~~aF~~la~~-------~~G~v~v~~~~V~C~~~g~  135 (228)
                      |||.||+.        |.  .+|||||+.||.+||..       +.|+|+|+||||+|+++|.
T Consensus        91 vtd~c~~~--------~~--~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~gg  143 (143)
T d1n10a2          91 ITDDNEEP--------IA--PYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEG  143 (143)
T ss_dssp             EEEECSSC--------SS--SSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTT
T ss_pred             EEecccCC--------CC--CccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCCC
Confidence            99999951        33  58999999999999984       6799999999999999873

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=100.00  E-value=1e-37  Score=252.04  Aligned_cols=135  Identities=24%  Similarity=0.392  Sum_probs=112.9

Q ss_pred             CCceeeEEEEecCCCCCCCCccccCCCCCCC-----CCCCCeEEEcChhccCC------CCCCCceEEEEEeCCCc----
Q 040256            3 GAWEDAHATFYGDMSGGETMQGACGYGDLKR-----QGYGLETAALSTALFNN------GSTCGACFEIICVNDPQ----   67 (228)
Q Consensus         3 ~~w~~g~aT~Yg~~~~~g~~~GaCgy~~~~~-----~~~~~~~aA~s~~~~~~------g~~CG~C~~v~c~~~~~----   67 (228)
                      .+|+.+++|||++++     +|||||+++..     .+++.++||+|++||++      |++||+||||+|++++.    
T Consensus        12 ~g~~~A~aT~Ygd~~-----~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~   86 (180)
T d1wc2a1          12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (180)
T ss_dssp             TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceEEeCCCC-----CCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccC
Confidence            379999999999764     79999999743     34568999999999999      89999999999985332    


Q ss_pred             -cccCCCceEEEEEecCCCCCCCCCCCcCCCCCC-----------CceeechhHHhhccCCCCCeeeEEEEEEEeccCCc
Q 040256           68 -WCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQ-----------KHFDLSMPMFVKLAPSKAGIIPVRYRRILCSKQGG  135 (228)
Q Consensus        68 -~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~-----------~~~DLs~~aF~~la~~~~G~v~v~~~~V~C~~~g~  135 (228)
                       .|..++ +|+|||||+||.++  ++.+||.+++           .||||+ .+|.+||....|+|+|+||+|+|+..++
T Consensus        87 ~~~~~g~-sV~V~iTd~CP~n~--~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~~~~G~v~V~yrrV~C~~~g~  162 (180)
T d1wc2a1          87 GPVREGL-SKTFMITNLCPNIY--PNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVVNCDSEHN  162 (180)
T ss_dssp             CCCCTTC-EEEEEEEEEECSST--TSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGGGTCSSEEEEEEEECHHHHHH
T ss_pred             CCCCCCC-cEEEEEEecCCCCC--CCCCccCCccccccccccCcccceech-HHHHHHhhhcCCcceeEEEEeeCCCccc
Confidence             233344 99999999999754  4556997653           399997 5999999999999999999999999999


Q ss_pred             eEEEEcCCCce
Q 040256          136 VKFEVKGNPNW  146 (228)
Q Consensus       136 i~~~v~s~~~w  146 (228)
                      +++++.++++|
T Consensus       163 ~~~~~~~n~~~  173 (180)
T d1wc2a1         163 HDHRTPSNSMY  173 (180)
T ss_dssp             HCTTSCCHHHH
T ss_pred             ccccccCCcch
Confidence            99888877776

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.96  E-value=2.2e-29  Score=184.96  Aligned_cols=90  Identities=30%  Similarity=0.620  Sum_probs=82.7

Q ss_pred             ceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcCC-CceEEcCCCCCCeEEeCCCCCC-ccEEEEEEecCCcEEEEcc
Q 040256          135 GVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQNWQTGTVLLG-QGLSFQVTTSDGKTLQFDN  210 (228)
Q Consensus       135 ~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~~-~~w~~m~r~~g~~W~~~~~~~g-~p~~vRvT~~~G~~v~~~~  210 (228)
                      +|+|+|+  ||||||+|+|.|++|.++|.+|||++++ +.|++|+|+|||+|++++++++ .||+||||+.+|+++++.|
T Consensus         2 ~i~F~v~~gsnp~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~gpls~Rvt~~~G~~~v~~n   81 (95)
T d1n10a1           2 KVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAED   81 (95)
T ss_dssp             CCEEEECTTCBTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEEEESSSCEEEEEE
T ss_pred             cEEEEECCCCCcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCcCEEEEEEEcCCCEEEECc
Confidence            6899999  7999999999999999999999999986 5899999999999998764322 3999999999999999999


Q ss_pred             ccCCCCCCCeEEec
Q 040256          211 VAPRNWQFGQTFQG  224 (228)
Q Consensus       211 vip~~w~~g~~y~~  224 (228)
                      |||++|++|++|++
T Consensus        82 ViP~~W~~G~tY~s   95 (95)
T d1n10a1          82 VIPEGWKADTSYES   95 (95)
T ss_dssp             EECSSCCSSEEEEC
T ss_pred             eECCCCCCCCEEeC
Confidence            99999999999986

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.94  E-value=1e-26  Score=170.31  Aligned_cols=87  Identities=28%  Similarity=0.532  Sum_probs=79.0

Q ss_pred             ceEEEEc--CCCceEEEEEEeeCCCcceEEEEEEcCC-CceEEcCCCCCCeEEeCCC--CCCccEEEEEEecCCcEEEEc
Q 040256          135 GVKFEVK--GNPNWTLVLVYNVGGAGDVTAVQVKGSS-TGWLPMSRNWGQNWQTGTV--LLGQGLSFQVTTSDGKTLQFD  209 (228)
Q Consensus       135 ~i~~~v~--s~~~w~av~v~n~~G~~~I~~Vev~~~~-~~w~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~  209 (228)
                      +|+|+|+  ||+|||+|+|.|++  ++|.+|||++.+ ++|++|+|+|||+|+++..  +.+ ||+||||+.+|+++++.
T Consensus         3 ~v~f~v~~GSnp~~lav~v~~~g--g~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~g-plsfRvt~~~G~~~v~~   79 (94)
T d1whoa_           3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD   79 (94)
T ss_dssp             SEEEEECTTCBTTEEEEEEEETT--CCEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCS-SEEEEEEETTSCEEEEE
T ss_pred             cEEEEECCCCCccEEEEEEEEcC--CCEEEEEEEECCCCceeECccCcCccEEECCCCCCCc-cEEEEEEEcCCCEEEEc
Confidence            5999998  79999999999998  689999999876 4799999999999998654  445 99999999999999999


Q ss_pred             cccCCCCCCCeEEec
Q 040256          210 NVAPRNWQFGQTFQG  224 (228)
Q Consensus       210 ~vip~~w~~g~~y~~  224 (228)
                      ||||++|++|+||+.
T Consensus        80 nViP~~W~~G~ty~~   94 (94)
T d1whoa_          80 DVVPEKYTIGATYAP   94 (94)
T ss_dssp             EEECSSCCTTCEECC
T ss_pred             ceECCCCCCCCEECc
Confidence            999999999999974

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.66  E-value=7.6e-09  Score=75.26  Aligned_cols=61  Identities=25%  Similarity=0.544  Sum_probs=50.1

Q ss_pred             CCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeec-hhHHhhccC----CCCCeeeEE
Q 040256           50 NGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLS-MPMFVKLAP----SKAGIIPVR  124 (228)
Q Consensus        50 ~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs-~~aF~~la~----~~~G~v~v~  124 (228)
                      .-..||+|++|+-..      +|. +++++|+|+|..              +.|||. +..|++|-.    ...|.+.|.
T Consensus        59 gq~sCGkclrvTN~a------tga-~~~~RiVDqCsn--------------gGlDLD~~~vFn~iDtdG~G~~~Ghl~V~  117 (125)
T d1bw3a_          59 GQAACGKCLRVTNPA------TGA-QITARIVDQCAN--------------GGLDLDWDTVFTKIDTNGIGYQQGHLNVN  117 (125)
T ss_dssp             SGGGTTCEEEEEETT------TTE-EEEEEEEECCSS--------------SSCCSCSSSSHHHHCSSCHHHHHSEEEEE
T ss_pred             CcccccceEEeeecc------cCc-EEEEEEeecccC--------------CCCccccHhhhheecCCCcccccccEEEE
Confidence            347899999999652      355 899999999873              689999 679999953    456889999


Q ss_pred             EEEEEec
Q 040256          125 YRRILCS  131 (228)
Q Consensus       125 ~~~V~C~  131 (228)
                      |++|.|.
T Consensus       118 y~fV~C~  124 (125)
T d1bw3a_         118 YQFVDCR  124 (125)
T ss_dssp             EEEECCC
T ss_pred             EEEecCC
Confidence            9999995

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=94.51  E-value=0.0078  Score=47.39  Aligned_cols=53  Identities=30%  Similarity=0.451  Sum_probs=34.6

Q ss_pred             EEEcChhccCCCCCCCceEEEEEeCCCccccCCCceEEEEEecCCCCCCCCCCCcCCCCCCCceeech
Q 040256           40 TAALSTALFNNGSTCGACFEIICVNDPQWCLKGAGSIKITATNFCPPNYTKTKDIWCNPPQKHFDLSM  107 (228)
Q Consensus        40 ~aA~s~~~~~~g~~CG~C~~v~c~~~~~~C~~g~~sv~v~V~D~Cp~~~~~~~~~~C~~~~~~~DLs~  107 (228)
                      +||.+-.-...+..|.+|||++-++++.   .|+ ..+|+||+.=-+         =  ..+||||..
T Consensus        72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~~---~GK-kMiVQ~tNTGgD---------l--g~n~FDl~i  124 (210)
T d2enga_          72 FAATSIAGSNEAGWCCACYELTFTSGPV---AGK-KMVVQSTSTGGD---------L--GSNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGGG---TTC-EEEEEEEEC----------------CCEEEEEC
T ss_pred             eeeeeecCCCccccccccEEEEeecCCc---CCC-EEEEEEeccCCc---------c--CCCeeeEec
Confidence            4555533333346799999999886554   466 799999997543         1  148999975