Citrus Sinensis ID: 040267
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | 2.2.26 [Sep-21-2011] | |||||||
| O04567 | 601 | Probable inactive recepto | no | no | 0.970 | 0.868 | 0.510 | 1e-147 | |
| C0LGI5 | 591 | Probable LRR receptor-lik | no | no | 0.979 | 0.891 | 0.482 | 1e-142 | |
| Q9ASS4 | 620 | Probably inactive leucine | no | no | 0.955 | 0.829 | 0.397 | 1e-105 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.864 | 0.390 | 0.342 | 4e-63 | |
| Q8L899 | 1207 | Systemin receptor SR160 O | N/A | no | 0.788 | 0.351 | 0.336 | 1e-61 | |
| Q9LJF3 | 1164 | Receptor-like protein kin | no | no | 0.858 | 0.396 | 0.325 | 2e-61 | |
| Q8GUQ5 | 1207 | Brassinosteroid LRR recep | N/A | no | 0.788 | 0.351 | 0.336 | 5e-61 | |
| Q9ZWC8 | 1166 | Serine/threonine-protein | no | no | 0.860 | 0.397 | 0.324 | 4e-60 | |
| Q94F62 | 615 | BRASSINOSTEROID INSENSITI | no | no | 0.921 | 0.806 | 0.314 | 5e-58 | |
| Q8VYT3 | 648 | Probable LRR receptor-lik | no | no | 0.931 | 0.773 | 0.304 | 6e-58 |
| >sp|O04567|Y1719_ARATH Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1 | Back alignment and function desciption |
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Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 291/570 (51%), Positives = 381/570 (66%), Gaps = 48/570 (8%)
Query: 9 AEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMN 67
AEDDV CL G+K S DP +LSSWS NSS IC+ GVSCWN ENRI+SL+L+ M
Sbjct: 24 AEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQSMQ 83
Query: 68 LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGN 127
L+G++PESL+ C+SLQ L+LS N+L G IP+Q+C W PYLV+LDLS N L G+IP ++
Sbjct: 84 LAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVE 143
Query: 128 CVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRL 187
C +LN L LS N+LSG +P QLS L RL++ S+A N LSG IPS D ++ L
Sbjct: 144 CKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPSELARFGGDDFSGNNGL 203
Query: 188 GGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGY----- 242
G L S+C L+ + L+ II AG GA SL + ++ W R R+K+GY
Sbjct: 204 CGKPL-SRCGALNGRNLSIIIVAGVLGAVGSLCVGLVIFWW-FFIREGSRKKKGYGAGKS 261
Query: 243 EFDDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL 302
+ D W+ L HKLV+V+LF KP++K+KL L+AAT+NFS+ N+ VS+ TG +YKA L
Sbjct: 262 KDDSDWIGLLRSHKLVQVTLFQKPIVKIKLGDLMAATNNFSSGNIDVSSRTGVSYKADLP 321
Query: 303 DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351
DGS LA+KRLSAC GEKQF EM ++G L+HPNL E+ LVYK+M NGTL
Sbjct: 322 DGSALAVKRLSACGFGEKQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTL 381
Query: 352 YSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409
+S LH+ G + LDWP+R IG+GAA+GL+WLHH C PP LHQ ISS+VIL+D+DFDAR
Sbjct: 382 FSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDAR 441
Query: 410 IMDFGFSRLT-----------NGD----------------ASLQKDVHGFGVVLLELVTG 442
I D+G ++L NGD ASL+ DV+GFG+VLLELVTG
Sbjct: 442 ITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTG 501
Query: 443 QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
QKP + EG+KG+LV+W+ Q +GR KD ID+++ KG+D+EILQFL+IAC CV
Sbjct: 502 QKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSICDKGHDEEILQFLKIACSCVVS 561
Query: 503 RPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532
RPKE+ +M QVY SL ++A++ G SE Y+E
Sbjct: 562 RPKERPTMIQVYESLKNMADKHGVSEHYDE 591
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Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGI5|Y1699_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1 | Back alignment and function description |
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Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 277/574 (48%), Positives = 371/574 (64%), Gaps = 47/574 (8%)
Query: 6 TATAEDDVKCLAGIKS-FNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELE 64
++ AEDDV CL G KS DP +L++WS NSS IC+ GVSCWN ENRILSL+L+
Sbjct: 15 SSHAEDDVLCLKGFKSSLKDPSNQLNTWSFPNSSSS-ICKLTGVSCWNAKENRILSLQLQ 73
Query: 65 EMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE 124
M LSGQ+PESL+ C+SLQ L+LS N+ G IP+Q+C W PYLV+LDLS N LSG+IP +
Sbjct: 74 SMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPYLVTLDLSGNKLSGSIPSQ 133
Query: 125 LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLAD 184
+ +C +LN+L L+ N+L+G +P +L+ L RL++ S+A N LSG IPS + + +
Sbjct: 134 IVDCKFLNSLALNQNKLTGSIPSELTRLNRLQRLSLADNDLSGSIPSELSHYGEDGFRGN 193
Query: 185 SRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYEF 244
L G L S C + K L I+ AG GA SL + FG++ W + K GY
Sbjct: 194 GGLCGKPL-SNCGSFNGKNLTIIVTAGVIGAVGSLCVGFGMFWWFFIRDRRKMNNYGYGA 252
Query: 245 DDC-----WVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKA 299
C W+ L HKLV+V+LF KP++K+KLV LI AT+ F + N++VS+ +G +YKA
Sbjct: 253 GKCKDDSDWIGLLRSHKLVQVTLFQKPIVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKA 312
Query: 300 MLLDGSMLAIKRLSA-CKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347
L DGS L +KRLS+ C+L EKQF E+ ++G ++HPNL E LVYK+M+
Sbjct: 313 DLPDGSTLEVKRLSSCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMA 372
Query: 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD 407
NGTLYS L +DWP+R+R+ +GAARGL+WLHH C P +HQ ISS+VIL+DEDFD
Sbjct: 373 NGTLYSQLQ---QWDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFD 429
Query: 408 ARIMDFGFSRL-----------TNGD-------------ASLQKDVHGFGVVLLELVTGQ 443
AR++D+G +L +NG ASL DV+GFG+VLLE+VTGQ
Sbjct: 430 ARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQ 489
Query: 444 KPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVR 503
KP IN EEG+K +LV W+ + S+GR KD ID+ + GKGYDDEI+Q L+IAC CV R
Sbjct: 490 KPVLINNGEEGFKESLVEWVSKHLSNGRSKDAIDRRIFGKGYDDEIMQVLRIACSCVVSR 549
Query: 504 PKEKWSMYQVYISLCSIAEQLGFSEFYEENSPFI 537
PKE+ M QVY SL ++ +Q GF Y + P I
Sbjct: 550 PKERPLMIQVYESLKNLGDQHGFFSEYSDEFPLI 583
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ASS4|Y5838_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 320/568 (56%), Gaps = 54/568 (9%)
Query: 12 DVKCLAGIKS-FNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSG 70
++ CL KS DP LS+W N + G+IC+F+GV+CW+ ENR+LS++L L G
Sbjct: 31 NIDCLRTFKSQVEDPNRYLSTWVFGNETAGYICKFSGVTCWHDDENRVLSIKLSGYGLRG 90
Query: 71 QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVY 130
P +++ C L L+LS NN G +P + P + LDLS N SG IP + N +
Sbjct: 91 VFPPAVKLCADLTGLDLSRNNFSGPLPANISTLIPLVTILDLSYNSFSGEIPMLISNITF 150
Query: 131 LNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG-AMKMDMLADS-RLG 188
LNTL L +N+ +G LPPQL+ L RLK FSV+ N L G IP+F K ++ A++ L
Sbjct: 151 LNTLMLQHNQFTGTLPPQLAQLGRLKTFSVSDNRLVGPIPNFNQTLQFKQELFANNLDLC 210
Query: 189 GANLGS-KCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYEFDDC 247
G L K S+ K+ I A G AA ++ V + + L V R+K+ +
Sbjct: 211 GKPLDDCKSASSSRGKVVIIAAVGGLTAAALVVGVVLFFYFRKLGAV--RKKQDDPEGNR 268
Query: 248 WVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSML 307
W + L K V+V +F K + K+KL L+ AT F N++ + TGT YK L DGS+L
Sbjct: 269 WAKSLKGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLL 328
Query: 308 AIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLH 356
IKRL + EK+F EMK +G +K+ NL E+ L+Y+YM+NG LY LH
Sbjct: 329 MIKRLQDSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLH 388
Query: 357 SNGNTA---LDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413
+ LDWPSRL+I +G A+GL+WLHH C+P +H+NISS IL+ +F+ +I DF
Sbjct: 389 PADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDF 448
Query: 414 GFSRLTN--------------GD-------------ASLQKDVHGFGVVLLELVTGQKPF 446
G +RL N GD A+ + DV+ FGVVLLELVTGQK
Sbjct: 449 GLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKAT 508
Query: 447 EIN------ASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCV 500
+ A EE +KGNLV WI +LSS ++++ ID++L G G DDEI + L++AC CV
Sbjct: 509 SVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLLGNGVDDEIFKVLKVACNCV 568
Query: 501 AVR-PKEKWSMYQVYISLCSIAEQLGFS 527
K++ +M++VY L +I E F+
Sbjct: 569 LPEIAKQRPTMFEVYQLLRAIGESYNFT 596
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 267/523 (51%), Gaps = 58/523 (11%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
GL ++ L L + L G VP SL + K L ++LS NNL G++ ++L LV L +
Sbjct: 673 GLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSGELSSELST-MEKLVGLYI 731
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS- 171
N +G IP ELGN L L +S N LSG +P ++ L L+ ++A N L G +PS
Sbjct: 732 EQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSD 791
Query: 172 -FFNGAMKMDMLADSRLGGANLGSKC-CDLSKKKLAAIIAAGAFG-AAPSLMLVFGLWLW 228
K + + L G +GS C + +K + A IA G + VF L W
Sbjct: 792 GVCQDPSKALLSGNKELCGRVVGSDCKIEGTKLRSAWGIAGLMLGFTIIVFVFVFSLRRW 851
Query: 229 NNLTRVSKR---------RKRGYEFDDCWV---ERLGVHKLVEVSLFLKPLIKLKLVHLI 276
RV +R R +G+ + + R + +++F +PL+K++L ++
Sbjct: 852 AMTKRVKQRDDPERMEESRLKGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKVRLGDIV 911
Query: 277 AATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-GEKQFLLEMKQVGLLKHP 335
AT +FS +N++ GT YKA L +A+K+LS K G ++F+ EM+ +G +KHP
Sbjct: 912 EATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHP 971
Query: 336 NL-----------EKPLVYKYMSNGTLYSLLHSNGN--TALDWPSRLRIGLGAARGLSWL 382
NL EK LVY+YM NG+L L + LDW RL+I +GAARGL++L
Sbjct: 972 NLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFL 1031
Query: 383 HHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT----------------------- 419
HH P +H++I +S IL+D DF+ ++ DFG +RL
Sbjct: 1032 HHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYG 1091
Query: 420 -NGDASLQKDVHGFGVVLLELVTGQKPFEINASE-EGYKGNLVNWIDQLSSSGRIKDVID 477
+ A+ + DV+ FGV+LLELVTG++P + E EG GNLV W Q + G+ DVID
Sbjct: 1092 QSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEG--GNLVGWAIQKINQGKAVDVID 1149
Query: 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520
L + L+ LQIA C+A P ++ +M V +L I
Sbjct: 1150 PLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192
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Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8L899|BRI1_SOLPE Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 257/502 (51%), Gaps = 78/502 (15%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNR 140
S+ L+LS N L G IP +L + YL L+L +NDLSG IP +LG + L LSYNR
Sbjct: 664 SMIFLDLSYNKLEGSIPKELGAMY-YLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNR 722
Query: 141 LSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDL- 199
+G +P L+SL L + ++ N LSG IP + D D R +L L
Sbjct: 723 FNGTIPNSLTSLTLLGEIDLSNNNLSGMIPE----SAPFDTFPDYRFANNSLCGYPLPLP 778
Query: 200 --------------SKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKR----- 240
S ++ A++ + A G SL +FGL + T+ +R+K
Sbjct: 779 CSSGPKSDANQHQKSHRRQASLAGSVAMGLLFSLFCIFGLIIVAIETKKRRRKKEAALEA 838
Query: 241 ---GYEF----DDCWVERLGVHKL-VEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTW 292
G+ + W L + ++ F KPL KL L+ AT+ F +++ S
Sbjct: 839 YMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGG 898
Query: 293 TGTTYKAMLLDGSMLAIKRL-SACKLGEKQFLLEMKQVGLLKHPNL-----------EKP 340
G YKA L DGS++AIK+L G+++F EM+ +G +KH NL E+
Sbjct: 899 FGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 958
Query: 341 LVYKYMSNGTLYSLLHSNGNTA--LDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
LVY+YM G+L +LH T L+WP+R +I +GAARGL++LHH C P +H+++ SS
Sbjct: 959 LVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSS 1018
Query: 399 VILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFG 433
+L+DE+ +AR+ DFG +RL + S + DV+ +G
Sbjct: 1019 NVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYG 1078
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK--GYDDEILQ 491
VVLLEL+TG++P + S + NLV W+ +L + G+I DV D+ L + + E+LQ
Sbjct: 1079 VVLLELLTGKQPTD---SADFGDNNLVGWV-KLHAKGKITDVFDRELLKEDASIEIELLQ 1134
Query: 492 FLQIACKCVAVRPKEKWSMYQV 513
L++AC C+ R ++ +M QV
Sbjct: 1135 HLKVACACLDDRHWKRPTMIQV 1156
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Receptor with a serine/threonine-protein kinase activity. Involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. May also regulate, in response to brassinosteroid binding, a signaling cascade involved in plant development. Solanum peruvianum (taxid: 4082) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LJF3|BRL3_ARATH Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 271/534 (50%), Gaps = 72/534 (13%)
Query: 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
++ L+L +SG +P + LQVLNL N L G IP + LDLS+NDL
Sbjct: 641 MIYLDLSYNAVSGSIPLGYGAMGYLQVLNLGHNLLTGTIPDSF-GGLKAIGVLDLSHNDL 699
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLP--PQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
G +P LG +L+ L +S N L+GP+P QL++ L +++ +P +G
Sbjct: 700 QGFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTF-PLTRYANNSGLCGVPLPPCSSG 758
Query: 176 AMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAG-AFGAAPSLMLVFGLWLWNNLTRV 234
+ A + K+ +A ++AG F +ML+ L+ + +
Sbjct: 759 SRPTRSHAHPK--------------KQSIATGMSAGIVFSFMCIVMLIMALYRARKVQKK 804
Query: 235 SKRRKRGYE----FDDCWVERLGVHK--LVEVSLFLKPLIKLKLVHLIAATSNFSAQNVL 288
K+R++ E + VH+ + V+ F KPL KL HL+ AT+ FSA +++
Sbjct: 805 EKQREKYIESLPTSGSSSWKLSSVHEPLSINVATFEKPLRKLTFAHLLEATNGFSADSMI 864
Query: 289 VSTWTGTTYKAMLLDGSMLAIKRL-SACKLGEKQFLLEMKQVGLLKHPNL---------- 337
S G YKA L DGS++AIK+L G+++F+ EM+ +G +KH NL
Sbjct: 865 GSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIG 924
Query: 338 -EKPLVYKYMSNGTLYSLLHSN---GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQ 393
E+ LVY+YM G+L ++LH G LDW +R +I +GAARGL++LHH C P +H+
Sbjct: 925 EERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHR 984
Query: 394 NISSSVILVDEDFDARIMDFGFSRLTNG-DASL------------------------QKD 428
++ SS +L+D+DF AR+ DFG +RL + D L + D
Sbjct: 985 DMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGD 1044
Query: 429 VHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL-TGKGYDD 487
V+ +GV+LLEL++G+KP I+ E G NLV W QL R +++D L T K D
Sbjct: 1045 VYSYGVILLELLSGKKP--IDPEEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDV 1102
Query: 488 EILQFLQIACKCVAVRPKEKWSMYQVYISLCSI----AEQLGFSEFYEENSPFI 537
E+L +L+IA +C+ RP ++ +M QV + E EF + +P +
Sbjct: 1103 ELLHYLKIASQCLDDRPFKRPTMIQVMTMFKELVQVDTENDSLDEFLLKETPLV 1156
|
Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. Binds brassinolide. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development. May be involved in cell growth and vascular differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GUQ5|BRI1_SOLLC Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 257/502 (51%), Gaps = 78/502 (15%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNR 140
S+ L+LS N L G IP +L + YL L+L +NDLSG IP +LG + L LSYNR
Sbjct: 664 SMIFLDLSYNKLEGSIPKELGAMY-YLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNR 722
Query: 141 LSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANL-------- 192
+G +P L+SL L + ++ N LSG IP + D D R +L
Sbjct: 723 FNGTIPNSLTSLTLLGEIDLSNNNLSGMIPE----SAPFDTFPDYRFANNSLCGYPLPIP 778
Query: 193 ---GSKC----CDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKR----- 240
G K S ++ A++ + A G SL +FGL + T+ +R+K
Sbjct: 779 CSSGPKSDANQHQKSHRRQASLAGSVAMGLLFSLFCIFGLIIVAIETKKRRRKKEAALEA 838
Query: 241 ---GYEF----DDCWVERLGVHKL-VEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTW 292
G+ + W L + ++ F KPL KL L+ AT+ F +++ S
Sbjct: 839 YMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGG 898
Query: 293 TGTTYKAMLLDGSMLAIKRL-SACKLGEKQFLLEMKQVGLLKHPNL-----------EKP 340
G YKA L DGS++AIK+L G+++F EM+ +G +KH NL E+
Sbjct: 899 FGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 958
Query: 341 LVYKYMSNGTLYSLLHSNGNTA--LDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
LVY+YM G+L +LH L+WP+R +I +GAARGL++LHH C P +H+++ SS
Sbjct: 959 LVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSS 1018
Query: 399 VILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFG 433
+L+DE+ +AR+ DFG +RL + S + DV+ +G
Sbjct: 1019 NVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYG 1078
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK--GYDDEILQ 491
VVLLEL+TG++P + S + NLV W+ +L + G+I DV D+ L + + E+LQ
Sbjct: 1079 VVLLELLTGKQPTD---SADFGDNNLVGWV-KLHAKGKITDVFDRELLKEDASIEIELLQ 1134
Query: 492 FLQIACKCVAVRPKEKWSMYQV 513
L++AC C+ R ++ +M QV
Sbjct: 1135 HLKVACACLDDRHWKRPTMIQV 1156
|
Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZWC8|BRL1_ARATH Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 267/537 (49%), Gaps = 74/537 (13%)
Query: 69 SGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNC 128
SG + + S+ ++S N + G IP YL L+L +N ++GTIP G
Sbjct: 628 SGMTMYTFSANGSMIYFDISYNAVSGFIPPGYGN-MGYLQVLNLGHNRITGTIPDSFGGL 686
Query: 129 VYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLA----D 184
+ L LS+N L G LP L SL L V+ N L+G IP F G + ++ +
Sbjct: 687 KAIGVLDLSHNNLQGYLPGSLGSLSFLSDLDVSNNNLTGPIP--FGGQLTTFPVSRYANN 744
Query: 185 SRLGGANLGSKCCDLSKKKLA------------AIIAAGAFGAAPSLMLVFGLWLWNNLT 232
S L G L C ++ + A+IA AF +MLV L+ +
Sbjct: 745 SGLCGVPL-RPCGSAPRRPITSRIHAKKQTVATAVIAGIAFSFMCFVMLVMALYRVRKVQ 803
Query: 233 RVSKRRKRGYEF----DDCWVERLGVHKL--VEVSLFLKPLIKLKLVHLIAATSNFSAQN 286
+ ++R++ E C + V + + V+ F KPL KL HL+ AT+ FSA+
Sbjct: 804 KKEQKREKYIESLPTSGSCSWKLSSVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAET 863
Query: 287 VLVSTWTGTTYKAMLLDGSMLAIKRL-SACKLGEKQFLLEMKQVGLLKHPNL-------- 337
++ S G YKA L DGS++AIK+L G+++F+ EM+ +G +KH NL
Sbjct: 864 MVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCK 923
Query: 338 ---EKPLVYKYMSNGTLYSLLHSN----GNTALDWPSRLRIGLGAARGLSWLHHCCHPPC 390
E+ LVY+YM G+L ++LH G L+W +R +I +GAARGL++LHH C P
Sbjct: 924 VGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHI 983
Query: 391 LHQNISSSVILVDEDFDARIMDFGFSRLTNG-DASL------------------------ 425
+H+++ SS +L+DEDF+AR+ DFG +RL + D L
Sbjct: 984 IHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTA 1043
Query: 426 QKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL-TGKG 484
+ DV+ +GV+LLEL++G+KP I+ E G NLV W QL R +++D L T K
Sbjct: 1044 KGDVYSYGVILLELLSGKKP--IDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKS 1101
Query: 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISL----CSIAEQLGFSEFYEENSPFI 537
D E+ +L+IA +C+ RP ++ +M Q+ E EF + +P +
Sbjct: 1102 GDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFKEMKADTEEDESLDEFSLKETPLV 1158
|
Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development. Binds brassinolide. May be involved in cell growth and vascular differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 279/582 (47%), Gaps = 86/582 (14%)
Query: 6 TATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELE 64
+ AE D L+ +K S DP L SW ++++ C + V+C +N + ++L
Sbjct: 24 SGNAEGD--ALSALKNSLADPNKVLQSW---DATLVTPCTWFHVTC--NSDNSVTRVDLG 76
Query: 65 EMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE 124
NLSGQ+ L +LQ L L +NN+ G IP QL LVSLDL N+LSG IP
Sbjct: 77 NANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGN-LTELVSLDLYLNNLSGPIPST 135
Query: 125 LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-----------SFF 173
LG L L L+ N LSG +P L++++ L+ ++ N L+G IP SF
Sbjct: 136 LGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFA 195
Query: 174 NG----AMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWN 229
N S + GS + A AA F A P++ L + W
Sbjct: 196 NTKLTPLPASPPPPISPTPPSPAGSNRITGAIAGGVAAGAALLF-AVPAIALAW--W--- 249
Query: 230 NLTRVSKRRKRGYEFDDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLV 289
+R+K F D E + + L L + L L A+ NFS +N+L
Sbjct: 250 ------RRKKPQDHFFDVPAEE-------DPEVHLGQLKRFSLRELQVASDNFSNKNILG 296
Query: 290 STWTGTTYKAMLLDGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL---------- 337
G YK L DG+++A+KRL + GE QF E++ + + H NL
Sbjct: 297 RGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 356
Query: 338 -EKPLVYKYMSNGTLYSLLHSNGNT--ALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
E+ LVY YM+NG++ S L + LDWP R RI LG+ARGL++LH C P +H++
Sbjct: 357 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 416
Query: 395 ISSSVILVDEDFDARIMDFGFSR------------------------LTNGDASLQKDVH 430
+ ++ IL+DE+F+A + DFG ++ L+ G +S + DV
Sbjct: 417 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVF 476
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEIL 490
G+GV+LLEL+TGQ+ F++ L++W+ L +++ ++D L G D+E+
Sbjct: 477 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE 536
Query: 491 QFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532
Q +Q+A C P E+ M +V + E G +E +EE
Sbjct: 537 QLIQVALLCTQSSPMERPKMSEV----VRMLEGDGLAERWEE 574
|
Dual specificity kinase acting on both serine/threonine-and tyrosine-containing substrates. Controls the expression of genes associated with innate immunity in the absence of pathogens or elicitors. Involved in brassinosteroid (BR) signal transduction. Phosphorylates BRI1. May be involved in changing the equilibrium between plasma membrane-located BRI1 homodimers and endocytosed BRI1-BAK1 heterodimers. Interaction with MSBP1 stimulates the endocytosis of BAK1 and suppresses brassinosteroid signaling. Acts in pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) via its interaction with FLS2 and the phosphorylation of BIK1. Involved in programmed cell death (PCD) control. Positively regulates the BR-dependent plant growth pathway and negatively regulates the BR-independent cell-death pathway. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VYT3|Y4052_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 283/585 (48%), Gaps = 84/585 (14%)
Query: 12 DVKCLAGIKS-FNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSG 70
+V+ L I++ +DP G L++W + C + ++C +N ++ L +LSG
Sbjct: 37 EVEALISIRNNLHDPHGALNNWDEFSVDP---CSWAMITC--SPDNLVIGLGAPSQSLSG 91
Query: 71 QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVY 130
+ ES+ + +L+ ++L NN+ GKIP +L + P L +LDLSNN SG IP +
Sbjct: 92 GLSESIGNLTNLRQVSLQNNNISGKIPPEL-GFLPKLQTLDLSNNRFSGDIPVSIDQLSS 150
Query: 131 LNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGA 190
L L L+ N LSGP P LS + L ++YN LSG +P F A ++ + + +
Sbjct: 151 LQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVPKF--PARTFNVAGNPLICRS 208
Query: 191 NLGSKCCD---------------LSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVS 235
N C + AI + + G+ L+L G + W R
Sbjct: 209 NPPEICSGSINASPLSVSLSSSSGRRSNRLAIALSVSLGSVVILVLALGSFCW---YRKK 265
Query: 236 KRRKRGYEFDDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGT 295
+RR +D E G+ L + F + +H+ T FS++N+L + G
Sbjct: 266 QRRLLILNLNDKQEE--GLQGLGNLRSF-----TFRELHVY--TDGFSSKNILGAGGFGN 316
Query: 296 TYKAMLLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342
Y+ L DG+M+A+KRL G+ QF +E++ + L H NL E+ LV
Sbjct: 317 VYRGKLGDGTMVAVKRLKDINGTSGDSQFRMELEMISLAVHKNLLRLIGYCATSGERLLV 376
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
Y YM NG++ S L S ALDW R RI +GAARGL +LH C P +H+++ ++ IL+
Sbjct: 377 YPYMPNGSVASKLKSK--PALDWNMRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILL 434
Query: 403 DEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGFGVVLLE 438
DE F+A + DFG ++L N G +S + DV GFG++LLE
Sbjct: 435 DECFEAVVGDFGLAKLLNHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 494
Query: 439 LVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDD-EILQFLQIAC 497
L+TG + E + KG ++ W+ +L ++++++D+ L G YD E+ + LQ+A
Sbjct: 495 LITGLRALEFGKTVS-QKGAMLEWVRKLHEEMKVEELLDREL-GTNYDKIEVGEMLQVAL 552
Query: 498 KCVAVRPKEKWSMYQVYISL--CSIAEQLG----FSEFYEENSPF 536
C P + M +V + L +AE+ S FY N F
Sbjct: 553 LCTQYLPAHRPKMSEVVLMLEGDGLAERWAASHNHSHFYHANISF 597
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | ||||||
| 255552774 | 602 | BRASSINOSTEROID INSENSITIVE 1-associated | 0.981 | 0.877 | 0.603 | 0.0 | |
| 224055521 | 595 | predicted protein [Populus trichocarpa] | 0.979 | 0.885 | 0.590 | 0.0 | |
| 359488761 | 613 | PREDICTED: probable inactive receptor ki | 0.975 | 0.856 | 0.591 | 0.0 | |
| 224140895 | 602 | predicted protein [Populus trichocarpa] | 0.981 | 0.877 | 0.576 | 1e-178 | |
| 449461899 | 604 | PREDICTED: probable inactive receptor ki | 0.975 | 0.869 | 0.566 | 1e-175 | |
| 357496269 | 602 | LRR receptor-like serine/threonine-prote | 0.996 | 0.890 | 0.541 | 1e-166 | |
| 297815142 | 579 | hypothetical protein ARALYDRAFT_484619 [ | 0.973 | 0.905 | 0.543 | 1e-163 | |
| 225424823 | 611 | PREDICTED: probable inactive receptor ki | 0.955 | 0.841 | 0.554 | 1e-162 | |
| 15233004 | 605 | leucine-rich repeat protein kinase-like | 0.973 | 0.866 | 0.536 | 1e-159 | |
| 224134625 | 606 | predicted protein [Populus trichocarpa] | 0.970 | 0.861 | 0.532 | 1e-159 |
| >gi|255552774|ref|XP_002517430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223543441|gb|EEF44972.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/573 (60%), Positives = 415/573 (72%), Gaps = 45/573 (7%)
Query: 3 FTPTATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSL 61
+ + EDD KCL G++ S +DPQGKLSSW+ NSS GF+C F GVSCWN ENRI++L
Sbjct: 21 ISSSVIGEDDAKCLEGVRNSLSDPQGKLSSWNFANSSSGFLCNFVGVSCWNDQENRIINL 80
Query: 62 ELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTI 121
EL +M LSGQVPESL+ CKSLQ L+LS+N L G IP+Q+C W PYLV+LDLSNNDLSG+I
Sbjct: 81 ELRDMQLSGQVPESLKYCKSLQNLDLSSNALSGTIPSQICTWLPYLVTLDLSNNDLSGSI 140
Query: 122 PHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181
PH+L NC YLN L LS NRLSGP+P + SSL RLK+FSVA N L+G IPSFF+ D
Sbjct: 141 PHDLVNCTYLNNLILSNNRLSGPIPYEFSSLSRLKRFSVANNDLTGTIPSFFSNFDPADF 200
Query: 182 LADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRG 241
++ L G LGS C LSKK LA IIAAG FGAA SL+L FG+W W +L R S+RRKRG
Sbjct: 201 DGNNGLCGKPLGSNCGGLSKKNLAIIIAAGVFGAAASLLLGFGVWWWYHL-RYSRRRKRG 259
Query: 242 YEF----DDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTY 297
+ D W +L HKLV+VSLF KPL+K++L LIAAT+NF+ +N+++S+ TG TY
Sbjct: 260 HGIGRGDDTSWAAKLRSHKLVQVSLFQKPLVKVRLADLIAATNNFNPENIIISSRTGITY 319
Query: 298 KAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346
KA+L DGS LAIKRL+ CKLGEK F EM ++G L+HPNL EK LVYK+M
Sbjct: 320 KALLPDGSALAIKRLNTCKLGEKHFRSEMNRLGQLRHPNLTPLLGFCVVEDEKLLVYKHM 379
Query: 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF 406
SNGTLY+LLH NG T LDWP+R RIG+GAARGL+WLHH C PP LHQNI S+VILVDEDF
Sbjct: 380 SNGTLYALLHGNG-TLLDWPTRFRIGVGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF 438
Query: 407 DARIMDFGFSRL-----------TNGD----------------ASLQKDVHGFGVVLLEL 439
DARIMDFG +RL NGD ASL+ DV+GFGVVLLEL
Sbjct: 439 DARIMDFGLARLMTSSDSNESSYVNGDLGELGYVAPEYSSTMVASLKGDVYGFGVVLLEL 498
Query: 440 VTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKC 499
VTGQKP +I EE +KGNLV+W++QLSSSGR+KD IDK+L GKG+D+EILQFL+I C
Sbjct: 499 VTGQKPLDIATPEEEFKGNLVDWVNQLSSSGRLKDAIDKSLCGKGHDEEILQFLKIGLNC 558
Query: 500 VAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532
V RPK++WSM +VY SL LGFSE EE
Sbjct: 559 VIARPKDRWSMLRVYQSLKVTGSDLGFSEQDEE 591
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055521|ref|XP_002298520.1| predicted protein [Populus trichocarpa] gi|222845778|gb|EEE83325.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/574 (59%), Positives = 414/574 (72%), Gaps = 47/574 (8%)
Query: 6 TATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELE 64
T AEDD +CL G++ S DP+G+L++W+ N+SVGFIC F GVSCWN ENRI++LEL
Sbjct: 16 TVFAEDDARCLQGVQNSLGDPEGRLATWNFGNTSVGFICNFVGVSCWNDRENRIINLELR 75
Query: 65 EMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE 124
+M LSGQVPESLQ CKSLQ L+LS+N+L G IP Q+C W PYLV+LDLSNND SG IP +
Sbjct: 76 DMKLSGQVPESLQYCKSLQNLDLSSNSLSGTIPAQICTWLPYLVTLDLSNNDFSGPIPPD 135
Query: 125 LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLAD 184
L NC+YLN L LS NRLSG +P S+L RLK+FSVA N L+G +PS FN D +
Sbjct: 136 LANCIYLNNLILSNNRLSGSIPLGFSALGRLKKFSVANNDLTGPVPSSFNNYDSADFDGN 195
Query: 185 SRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYEF 244
L G L SKC LSKK LA IIAAG FGAA SL+L FG+W W ++ S RRK GY+F
Sbjct: 196 KGLCGRPL-SKCGGLSKKNLAIIIAAGVFGAASSLLLGFGVWWWYQ-SKHSGRRKGGYDF 253
Query: 245 ----DDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAM 300
D W +RL HKLV+VSLF KPL+K+KL L+AAT+NFS +++++ST +GTTYKA+
Sbjct: 254 GRGDDTNWAQRLRSHKLVQVSLFQKPLVKVKLGDLMAATNNFSPESIIISTRSGTTYKAV 313
Query: 301 LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349
L DGS LAIKRLS CKLGEKQF LEM ++G ++HPNL EK LVYK+MSNG
Sbjct: 314 LPDGSALAIKRLSTCKLGEKQFQLEMNRLGQVRHPNLAPLLGFCVAGEEKLLVYKHMSNG 373
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409
TLYSLLH GN ALDWP+R RIG GAARGL+WLHH PP LHQNI S+ ILVDEDFDAR
Sbjct: 374 TLYSLLHGTGN-ALDWPTRFRIGFGAARGLAWLHHGYQPPFLHQNICSNAILVDEDFDAR 432
Query: 410 IMDFGFSRL-----------TNGD----------------ASLQKDVHGFGVVLLELVTG 442
IMDFG +R+ NGD ASL+ DV+GFGVVLLELVTG
Sbjct: 433 IMDFGLARMMTSSDSNESSYVNGDLGEIGYVAPEYSSTMVASLKGDVYGFGVVLLELVTG 492
Query: 443 QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
QKP +I+ +EEG+KGNLV+W++ LSSSGR KD ++KA+ GKG+D+EI QFL+IACKCV
Sbjct: 493 QKPLDISTAEEGFKGNLVDWVNNLSSSGRSKDAVEKAICGKGHDEEISQFLKIACKCVIA 552
Query: 503 RPKEKWSMYQVYISLCSIAEQLGFSEFYEENSPF 536
RPK++WSMY+ Y SL IA + G + E++ F
Sbjct: 553 RPKDRWSMYEAYQSLKIIANEHGLT-LSEQDDEF 585
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488761|ref|XP_003633815.1| PREDICTED: probable inactive receptor kinase At1g27190-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/570 (59%), Positives = 412/570 (72%), Gaps = 45/570 (7%)
Query: 6 TATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELE 64
A AEDDVKCL G+K S +DPQGKLSSWS +N SVG +C+F GV+CWN ENRI LEL
Sbjct: 32 AAVAEDDVKCLRGVKESLSDPQGKLSSWSFSNISVGSLCKFVGVACWNDRENRIFGLELP 91
Query: 65 EMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE 124
+M LSG++P+ L+ C+S+Q L+LS N L+G IP+Q+C W PYLV+LDLSNNDLSGTIP +
Sbjct: 92 DMKLSGEIPKPLEYCQSMQTLDLSGNRLYGNIPSQICTWLPYLVTLDLSNNDLSGTIPPD 151
Query: 125 LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLAD 184
L NC +LN+L L+ N+LSG +P QLSSL RLK+FSVA N L+G IPS F K +
Sbjct: 152 LANCSFLNSLLLADNQLSGIIPSQLSSLGRLKKFSVANNRLTGTIPSAFGKFDKAGFDGN 211
Query: 185 SRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYEF 244
S L G LGSKC L+KK LA IIAAG FGAA SL+L FGLW W R+ +RKR Y
Sbjct: 212 SGLCGRPLGSKCGGLNKKSLAIIIAAGVFGAAASLLLGFGLWWW-FFARLRGQRKRRYGI 270
Query: 245 --DD--CWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAM 300
DD W ERL HKLV+V+LF KP++K+KL L+AAT+NF +N++ ST TGT+YKA+
Sbjct: 271 GRDDHSSWTERLRAHKLVQVTLFQKPIVKVKLADLMAATNNFHPENIINSTRTGTSYKAI 330
Query: 301 LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349
L DGS LAIKRL+ C LGEKQF EM ++G +HPNL EK LVYKYMSNG
Sbjct: 331 LPDGSALAIKRLNTCNLGEKQFRSEMNRLGQFRHPNLAPLLGFCAVEEEKLLVYKYMSNG 390
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409
TLYSLLH NG T +DW +R RIGLGAARGL+WLHH C PP LH+NISS+VIL+D+DFDAR
Sbjct: 391 TLYSLLHGNG-TPMDWATRFRIGLGAARGLAWLHHGCQPPLLHENISSNVILIDDDFDAR 449
Query: 410 IMDFGFSRL-----TNGD----------------------ASLQKDVHGFGVVLLELVTG 442
I+DFG +RL +NG ASL+ DV+GFGVVLLELVTG
Sbjct: 450 IVDFGLARLMATSDSNGSSFVNGGLGEFGYVAPEYSSTMVASLKGDVYGFGVVLLELVTG 509
Query: 443 QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAV 502
QKP E+ +EEG+KGNLV W++QL SGR KDVID+AL GKG+D+EILQFL+IAC C+
Sbjct: 510 QKPLEVTNAEEGFKGNLVEWVNQLCGSGRNKDVIDEALCGKGHDEEILQFLKIACNCLGP 569
Query: 503 RPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532
RPK++ SMYQ + SL S+ + GFSE Y+E
Sbjct: 570 RPKDRLSMYQAFESLKSMGDHHGFSEHYDE 599
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224140895|ref|XP_002323813.1| predicted protein [Populus trichocarpa] gi|222866815|gb|EEF03946.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 330/572 (57%), Positives = 408/572 (71%), Gaps = 44/572 (7%)
Query: 9 AEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMN 67
EDDV+CL G+K S ++P+GKL++W+ NSSVGFIC F GVSCWN ENRI++L+L +M
Sbjct: 27 GEDDVRCLQGVKNSLDNPEGKLTTWNFANSSVGFICNFVGVSCWNDRENRIINLQLRDMK 86
Query: 68 LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGN 127
LSGQVPESL+ C+SLQ L+LS+N+L G IP Q+C W PYLV+LDLSNNDLSG IP +L N
Sbjct: 87 LSGQVPESLRYCQSLQNLDLSSNSLSGTIPAQICTWVPYLVTLDLSNNDLSGPIPPDLAN 146
Query: 128 CVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRL 187
C YLN L LS NRLSG +P +LS L RLKQFSV N L+G +PSFF + L
Sbjct: 147 CTYLNKLILSNNRLSGSIPFELSGLGRLKQFSVENNDLAGTVPSFFTNLDSASFDGNKGL 206
Query: 188 GGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYEF--- 244
G L SKC L +K LA IIAAG FGAA SL+L FG+W W +L ++RK GY F
Sbjct: 207 CGKPL-SKCGGLREKNLAIIIAAGVFGAASSLLLGFGVWWWYHLRYSERKRKGGYGFGRG 265
Query: 245 -DDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLD 303
D W +RL HKLV+VSLF KPL+K+KL LIAAT+NFS N+++ST TGTTYKA+L D
Sbjct: 266 DDTSWAQRLRSHKLVQVSLFQKPLVKVKLADLIAATNNFSPDNIIISTRTGTTYKAVLPD 325
Query: 304 GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLY 352
GS LA+KRL+ CKLGEKQF EM ++G ++HPNL EK LVYK+MS GTLY
Sbjct: 326 GSALALKRLTTCKLGEKQFRSEMNRLGQIRHPNLAPLLGFCVVEEEKLLVYKHMSYGTLY 385
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412
SLLH +GN ALDW +R RIGLGAARGL+WLHH C P L+QN+ S+VILVDEDFDARIMD
Sbjct: 386 SLLHGSGN-ALDWSTRFRIGLGAARGLAWLHHGCQRPFLYQNMCSNVILVDEDFDARIMD 444
Query: 413 FGFSRLT----------NGD----------------ASLQKDVHGFGVVLLELVTGQKPF 446
FG +++T NGD ASL+ DV+GFGVVLLELVTGQKP
Sbjct: 445 FGLAKMTCSDSNESSYVNGDLGEFGYVAPEYSSTMVASLKGDVYGFGVVLLELVTGQKPL 504
Query: 447 EINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE 506
+I+ +EEG+KG+LV+W++ LSSSGR KD +DKA+ GKG+D+ I QFL+IAC CV RPK+
Sbjct: 505 DISNAEEGFKGSLVDWVNHLSSSGRSKDAVDKAICGKGHDEGIYQFLKIACNCVIARPKD 564
Query: 507 KWSMYQVYISLCSIAEQLGFSEFYEENSPFII 538
+WSMY+ Y SL +IA + ++ P I
Sbjct: 565 RWSMYKTYQSLKTIASEHHVLSELDDEFPLIF 596
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449461899|ref|XP_004148679.1| PREDICTED: probable inactive receptor kinase At1g27190-like [Cucumis sativus] gi|449522849|ref|XP_004168438.1| PREDICTED: probable inactive receptor kinase At1g27190-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/568 (56%), Positives = 409/568 (72%), Gaps = 43/568 (7%)
Query: 6 TATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFIC-RFNGVSCWNGLENRILSLEL 63
+ EDD++CL G+K + DP G+LSSW N+SVG +C +F G+SCWN ENRILSLEL
Sbjct: 26 SVVPEDDIRCLRGVKNALVDPIGRLSSWDFKNTSVGHLCDKFVGLSCWNDRENRILSLEL 85
Query: 64 EEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH 123
++M LSG + E LQ C SLQ L+LS N+ G+IP +C+W PYLVS+DLSNN +G+IP
Sbjct: 86 KDMKLSGSISEDLQYCVSLQKLDLSGNSFSGEIPPHICEWLPYLVSMDLSNNQFTGSIPA 145
Query: 124 ELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLA 183
+L C YLN+L LS N LSG +P +L+SL RL +FSVA N L+G IPSFF+ K D
Sbjct: 146 DLARCSYLNSLILSDNELSGTIPVELTSLGRLNKFSVANNQLTGTIPSFFDKFGKEDFDG 205
Query: 184 DSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGY- 242
+S L G +GS C LSKK LA IIAAG FGAA SL+L FGLW W + +R++ +R+RGY
Sbjct: 206 NSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYH-SRMNMKRRRGYG 264
Query: 243 -EFDDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAML 301
W +RL +KLV+VSLF KPL+K++L L+AAT+NF+++N++VS+ TGTTY+A+L
Sbjct: 265 DGISGDWADRLRAYKLVQVSLFQKPLVKVRLADLMAATNNFNSENIIVSSRTGTTYRAVL 324
Query: 302 LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGT 350
DGS+LAIKRL+ CKLGEK F +EM ++G ++HPNL EK LVYKYMSNGT
Sbjct: 325 PDGSVLAIKRLNTCKLGEKLFRMEMNRLGSIRHPNLTPLLGFCVVEEEKLLVYKYMSNGT 384
Query: 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410
L SLLH N + LDW +R RIGLGAARGL+WLHH C PP +HQNI SSVILVDED+DARI
Sbjct: 385 LSSLLHGN-DEILDWATRFRIGLGAARGLAWLHHGCQPPFMHQNICSSVILVDEDYDARI 443
Query: 411 MDFGFSRL----------TNGD----------------ASLQKDVHGFGVVLLELVTGQK 444
MDFG +RL NGD ASL+ DV+GFGVVLLEL+TGQK
Sbjct: 444 MDFGLARLMASDSQDSSFVNGDLGELGYVAPEYPSTMVASLKGDVYGFGVVLLELITGQK 503
Query: 445 PFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRP 504
P E+ +EEGYKGNLV+W++QLS+SGRIKDVID+ L GKG D+EILQFL+I C+ RP
Sbjct: 504 PLEVTKAEEGYKGNLVDWVNQLSTSGRIKDVIDRDLCGKGNDEEILQFLKITMNCIVSRP 563
Query: 505 KEKWSMYQVYISLCSIAEQLGFSEFYEE 532
K++WSMYQVY S+ ++A+ F E +E
Sbjct: 564 KDRWSMYQVYQSMRTMAKDYSFPEPDDE 591
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357496269|ref|XP_003618423.1| LRR receptor-like serine/threonine-protein kinase FEI [Medicago truncatula] gi|355493438|gb|AES74641.1| LRR receptor-like serine/threonine-protein kinase FEI [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/580 (54%), Positives = 404/580 (69%), Gaps = 44/580 (7%)
Query: 1 MSFTPTATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRIL 59
++ + + ED+V+CL GI+ + + +S+W N +VGFIC F GV+CWN ENR+L
Sbjct: 17 VTLSSSQVEEDNVRCLQGIQQNLGNSDSPISNWKFNNRTVGFICDFVGVTCWNVRENRVL 76
Query: 60 SLELEEMNLSGQVPESLQSC-KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
LEL+ M LSG++PESL+ C +SLQ L+L +N+L IPTQ+C+W P+LV++DLS N+L+
Sbjct: 77 GLELKGMKLSGKIPESLKYCGQSLQRLDLGSNSLSSVIPTQICEWMPFLVTMDLSGNNLN 136
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178
G IPH + NC YLN L L N L+G +P +++SL RL +FSVA N LSG IPSFFNG K
Sbjct: 137 GEIPHTIVNCSYLNELMLDNNHLTGSIPYEITSLTRLHKFSVANNELSGDIPSFFNGFDK 196
Query: 179 MDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRR 238
+S L G LGSKC +SKK LA IIAAG FGAA SL+ FGLW W +L +RR
Sbjct: 197 DGFDGNSGLCGGPLGSKCGGMSKKNLAIIIAAGVFGAAGSLLAAFGLWWWYHLRLGGERR 256
Query: 239 --KRGYEFD--DCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTG 294
K GY D W RL HKL +V+LF KP++K+KL L+AAT+NFS +NVL++T TG
Sbjct: 257 RSKEGYVVGGVDDWAVRLRGHKLAQVNLFQKPIVKVKLGDLMAATNNFSNENVLITTRTG 316
Query: 295 TTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343
TY+A L DGS LA+KRLS+CK+GEKQF +EM ++G ++HPNL EK LVY
Sbjct: 317 ATYRADLPDGSTLAVKRLSSCKIGEKQFRMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVY 376
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
K+MSNGTLYSLLH N + LDW R RIGLGAARGL+WLHH CHPP + QNI S+VILVD
Sbjct: 377 KHMSNGTLYSLLHKN-SGVLDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVD 435
Query: 404 EDFDARIMDFGFSRL---------TNGD----------------ASLQKDVHGFGVVLLE 438
E+FDARIMDFG +RL NGD ASL+ DV+GFGV+LLE
Sbjct: 436 EEFDARIMDFGLARLMTSDANGSFVNGDLGELGYIAPEYSSTMVASLKGDVYGFGVLLLE 495
Query: 439 LVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACK 498
LVTG KP E+N +E +KGNLV+W++ SSSGR+KD ID++++GKG D+EILQFL+IA
Sbjct: 496 LVTGCKPLEVNNIDEEFKGNLVDWVNMHSSSGRLKDCIDRSISGKGNDEEILQFLKIASN 555
Query: 499 CVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEENSPFII 538
CV R K++WSMYQVY SL I++ FSE +++ P I
Sbjct: 556 CVIARAKDRWSMYQVYNSLKGISKDHSFSE-HDDEFPLIF 594
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297815142|ref|XP_002875454.1| hypothetical protein ARALYDRAFT_484619 [Arabidopsis lyrata subsp. lyrata] gi|297321292|gb|EFH51713.1| hypothetical protein ARALYDRAFT_484619 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/572 (54%), Positives = 392/572 (68%), Gaps = 48/572 (8%)
Query: 7 ATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEE 65
A EDD++CL G+K S DPQ L SW+ N+++GF+C F GVSCWN ENR+++LEL +
Sbjct: 2 AADEDDIRCLRGLKTSLTDPQNALKSWNFDNTTLGFLCNFVGVSCWNNQENRVINLELRD 61
Query: 66 MNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL 125
M LSG++P+SLQ C SLQ L+LS+N L G IP +LC W P+LVSLDLSNN+L+G IP +L
Sbjct: 62 MGLSGKIPDSLQYCASLQKLDLSSNRLSGNIPKELCNWLPFLVSLDLSNNELNGEIPPDL 121
Query: 126 GNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA--MKMDMLA 183
C ++N+L LS NRLSG +P Q S+L RL +FSVA N LSGRIP FF+ D
Sbjct: 122 AKCSFVNSLVLSDNRLSGQIPVQFSALGRLGRFSVANNDLSGRIPVFFSSPSYSSDDFKG 181
Query: 184 DSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYE 243
+ L G L S C LSKK LA IIAAG FGAA S++L FG+W + +L +RR E
Sbjct: 182 NKGLCGRPLSSSCGGLSKKNLAIIIAAGVFGAAASMLLAFGIWWYYHLKWTRRRRSGLTE 241
Query: 244 FD-DCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL 302
+RL HKL +VSLF KPL+K+KL L+AAT+NFS+ N++VST TGTTYKA+L
Sbjct: 242 VGVSGLAKRLRSHKLTQVSLFQKPLVKVKLGDLMAATNNFSSGNIIVSTRTGTTYKALLP 301
Query: 303 DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351
DGS LA+K LSACKLGE++F EM Q+ L+HPNL +K LVYKYMSNGTL
Sbjct: 302 DGSALAVKHLSACKLGEREFRYEMNQLWELRHPNLAPLLGYCVVEEDKLLVYKYMSNGTL 361
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411
+SLL SNG LDW +R RIGLGAARGL+WLHH C PP LHQNI SSVIL+DEDFDARI+
Sbjct: 362 HSLLDSNG-VELDWSTRFRIGLGAARGLAWLHHGCRPPILHQNICSSVILIDEDFDARII 420
Query: 412 DFGFSRL-----------TNGD----------------ASLQKDVHGFGVVLLELVTGQK 444
D G +RL GD ASL+ DV+G GVVLLEL TG K
Sbjct: 421 DSGLARLMVPSDNNESSFMTGDLGEFGYVAPEYSTTMLASLKGDVYGLGVVLLELATGLK 480
Query: 445 PFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRP 504
EG+KG+LV+W+ QL SSGRI + D+ + GKG+++EIL+F++IAC CV+ RP
Sbjct: 481 AL----GREGFKGSLVDWVKQLESSGRIAETFDENIRGKGHEEEILKFVEIACNCVSSRP 536
Query: 505 KEKWSMYQVYISLCSIAEQLGFSEFYEENSPF 536
KE+WSM+Q Y SL +IAE+ G+S F E++ F
Sbjct: 537 KERWSMFQAYQSLKAIAEKQGYS-FSEQDDDF 567
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424823|ref|XP_002268171.1| PREDICTED: probable inactive receptor kinase At1g27190-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 321/579 (55%), Positives = 394/579 (68%), Gaps = 65/579 (11%)
Query: 10 EDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNL 68
EDDV CL G+K S DP K+S+W TN+S FIC GVSCWN E+RI+SL+L +MNL
Sbjct: 30 EDDVVCLQGLKDSLTDPDDKISTWRFTNTSASFICNLVGVSCWNAQESRIISLQLPDMNL 89
Query: 69 SGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNC 128
G +P+SLQ C+SLQ L LS N + G IP Q+C W PY+V+LDLS+NDL+G IP E+ NC
Sbjct: 90 IGTLPDSLQHCRSLQSLGLSGNRISGSIPDQICTWLPYVVTLDLSHNDLTGPIPPEMVNC 149
Query: 129 VYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLG 188
+LN L L+ N LSG +P ++ L RLK+FSVA N LSG IPS ++ D
Sbjct: 150 KFLNNLILNNNGLSGMIPYEIGRLPRLKKFSVANNDLSGSIPS------ELSKFEDDAFD 203
Query: 189 GAN------LGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGY 242
G N LG KC LS K LA IIAAG FGAA SL+L F LW W R++ R+KRGY
Sbjct: 204 GNNGLCRKPLG-KCGGLSSKSLAIIIAAGIFGAAGSLLLGFALWWW-FFVRLN-RKKRGY 260
Query: 243 EFDD------CWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTT 296
D W ERL +HKLV+VSLF KP++K+KL L+AAT+NF + +L ST TG +
Sbjct: 261 SGGDSGKIGGSWAERLRMHKLVQVSLFQKPIVKIKLADLMAATNNFDPEYLLCSTRTGVS 320
Query: 297 YKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345
YKA+LLDGS LAIKRLSACKL +KQF EM ++G L+HPNL EK LVYK+
Sbjct: 321 YKAVLLDGSALAIKRLSACKLSDKQFRSEMNRLGQLRHPNLVPLLGFCAVEEEKLLVYKH 380
Query: 346 MSNGTLYSLLHSNG-----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
M NGTLYSLLH + + ++DWP+RLRIG+GAARGL+WLHH C PP +HQNISSSVI
Sbjct: 381 MPNGTLYSLLHGSTSFHSQHHSIDWPTRLRIGVGAARGLAWLHHGCQPPYMHQNISSSVI 440
Query: 401 LVDEDFDARIMDFGFSRL-----------TNGD----------------ASLQKDVHGFG 433
L+D+D+DARI DFG +RL NGD SL+ DV+GFG
Sbjct: 441 LLDDDYDARITDFGLARLVASADSNDSSFVNGDLGEFGYVAPEYSSTMVPSLKGDVYGFG 500
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFL 493
VVLLELVTGQKP E+N +EG+KGNLV+W+ QL SGR KD IDK L GKGYDDEI+Q +
Sbjct: 501 VVLLELVTGQKPLEVNNGDEGFKGNLVDWVIQLLISGRSKDAIDKDLWGKGYDDEIVQLM 560
Query: 494 QIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532
++AC CV RPKE+ SMY VY SL S+AE+ GFSE Y+E
Sbjct: 561 RVACSCVGSRPKERPSMYNVYQSLKSMAEKHGFSEQYDE 599
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15233004|ref|NP_189486.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gi|9294580|dbj|BAB02861.1| receptor-like protein kinase-like protein [Arabidopsis thaliana] gi|26449808|dbj|BAC42027.1| putative receptor kinase [Arabidopsis thaliana] gi|224589583|gb|ACN59325.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332643925|gb|AEE77446.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/572 (53%), Positives = 388/572 (67%), Gaps = 48/572 (8%)
Query: 7 ATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEE 65
A EDD++CL G+K S DPQ L SW+ N+++GF+C F GVSCWN ENR+++LEL +
Sbjct: 28 AADEDDIRCLRGLKASLTDPQNALKSWNFDNTTLGFLCNFVGVSCWNNQENRVINLELRD 87
Query: 66 MNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL 125
M LSG++P+SLQ C SLQ L+LS+N L G IPT+LC W P+LVSLDLSNN+L+G IP +L
Sbjct: 88 MGLSGKIPDSLQYCASLQKLDLSSNRLSGNIPTELCNWLPFLVSLDLSNNELNGEIPPDL 147
Query: 126 GNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA--MKMDMLA 183
C ++N+L LS NRLSG +P Q S+L RL +FSVA N LSGRIP FF+ D
Sbjct: 148 AKCSFVNSLVLSDNRLSGQIPVQFSALGRLGRFSVANNDLSGRIPVFFSSPSYSSDDFSG 207
Query: 184 DSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYE 243
+ L G L S C LSKK L IIAAG FGAA S++L FG+W + +L +RR E
Sbjct: 208 NKGLCGRPLSSSCGGLSKKNLGIIIAAGVFGAAASMLLAFGIWWYYHLKWTRRRRSGLTE 267
Query: 244 FD-DCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL 302
+RL HKL +VSLF KPL+K+KL L+AAT+NF+++N++VST TGTTYKA+L
Sbjct: 268 VGVSGLAQRLRSHKLTQVSLFQKPLVKVKLGDLMAATNNFNSENIIVSTRTGTTYKALLP 327
Query: 303 DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351
DGS LA+K LS CKLGE++F EM Q+ L+H NL EK LVYKYMSNGTL
Sbjct: 328 DGSALAVKHLSTCKLGEREFRYEMNQLWELRHSNLAPLLGFCVVEEEKFLVYKYMSNGTL 387
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411
+SLL SN LDW +R RIGLGAARGL+WLHH C PP LHQNI SSVIL+DEDFDARI+
Sbjct: 388 HSLLDSN-RGELDWSTRFRIGLGAARGLAWLHHGCRPPILHQNICSSVILIDEDFDARII 446
Query: 412 DFGFSRL-----------TNGD----------------ASLQKDVHGFGVVLLELVTGQK 444
D G +RL GD ASL+ DV+G GVVLLEL TG K
Sbjct: 447 DSGLARLMVPSDNNESSFMTGDLGEFGYVAPEYSTTMLASLKGDVYGLGVVLLELATGLK 506
Query: 445 PFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRP 504
EG+KG+LV+W+ QL SSGRI + D+ + GKG+D+EI +F++IA CV+ RP
Sbjct: 507 A----VGGEGFKGSLVDWVKQLESSGRIAETFDENIRGKGHDEEISKFVEIALNCVSSRP 562
Query: 505 KEKWSMYQVYISLCSIAEQLGFSEFYEENSPF 536
KE+WSM+Q Y SL +IAE+ G+S F E++ F
Sbjct: 563 KERWSMFQAYQSLKAIAEKQGYS-FSEQDDDF 593
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134625|ref|XP_002327450.1| predicted protein [Populus trichocarpa] gi|222836004|gb|EEE74425.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 304/571 (53%), Positives = 384/571 (67%), Gaps = 49/571 (8%)
Query: 10 EDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNL 68
EDD+ CL G+K SF DP G+L+SW+ N+SV F+C+ NGVSCWN ENRI+SL+L L
Sbjct: 23 EDDITCLEGVKKSFTDPLGRLTSWTFNNNSVAFVCKLNGVSCWNEKENRIISLQLSSFQL 82
Query: 69 SGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNC 128
SG++PESL+ C SL L+LS+N+L G IP ++C W PY+VSLDLS N SG IP E+ NC
Sbjct: 83 SGKLPESLKYCHSLTTLDLSSNDLSGPIPPEICNWLPYIVSLDLSGNKFSGPIPPEIVNC 142
Query: 129 VYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLG 188
+LN L LS N+L+G +P L L RLK FSVA N LSG IP K + L
Sbjct: 143 KFLNNLILSGNQLTGSIPFGLGRLDRLKTFSVASNELSGSIPDELWAFSKDSFDGNDGLC 202
Query: 189 GANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLW----NNLTRVSKRRKRGYEF 244
G LG KC LS K L II AG GA SL+L F +W W + G
Sbjct: 203 GKPLG-KCGGLSSKSLGIIIVAGVVGAGGSLILGFVIWWWLFVRGGKKKRGSGGGGGKGD 261
Query: 245 DDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDG 304
D W+E L HKLV+V+LF KP++K+KL ++AAT++F +N+++ST TG +YKA L DG
Sbjct: 262 DPSWIELLRSHKLVQVTLFQKPIVKIKLADILAATNSFDFENIVISTRTGDSYKADLPDG 321
Query: 305 SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYS 353
S LAIKRL+ACKLGEKQF EM ++G L+HPNL EK LVYK+M NGTLYS
Sbjct: 322 SSLAIKRLNACKLGEKQFRGEMNRLGELRHPNLVPLLGYCAVEVEKLLVYKHMPNGTLYS 381
Query: 354 LLHSNG-----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408
LH +G ++ LDWP+R+R+G+GA RGL+WLHH C PP +HQ ISS+VIL+D+DFDA
Sbjct: 382 QLHGSGFGISQSSVLDWPTRVRVGVGATRGLAWLHHGCDPPYIHQYISSNVILLDDDFDA 441
Query: 409 RIMDFGFSRL-----------TNGD----------------ASLQKDVHGFGVVLLELVT 441
RI DFG +RL NGD ASL+ DV+GFGVVLLELVT
Sbjct: 442 RITDFGLARLISSPDSNDSSYVNGDLGEFGYIAPEYSSTMVASLKGDVYGFGVVLLELVT 501
Query: 442 GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVA 501
GQK ++N EEG+KGNLV+W++QL S+GR KD IDKALTGKG+DDEI+QFL++A CV
Sbjct: 502 GQKALDVNNEEEGFKGNLVDWVNQLVSTGRSKDAIDKALTGKGHDDEIMQFLRVAWSCVV 561
Query: 502 VRPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532
RPK++ SMYQVY SL +AE+ GFS+ Y+E
Sbjct: 562 SRPKDRPSMYQVYESLKGLAEKHGFSDQYDE 592
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 538 | ||||||
| TAIR|locus:2088937 | 605 | AT3G28450 [Arabidopsis thalian | 0.762 | 0.677 | 0.497 | 7.9e-129 | |
| TAIR|locus:2205834 | 601 | AT1G27190 [Arabidopsis thalian | 0.763 | 0.683 | 0.456 | 1.5e-121 | |
| TAIR|locus:2020558 | 591 | AT1G69990 [Arabidopsis thalian | 0.789 | 0.719 | 0.428 | 6.8e-117 | |
| TAIR|locus:2165981 | 620 | BIR1 "AT5G48380" [Arabidopsis | 0.775 | 0.672 | 0.347 | 9.4e-82 | |
| TAIR|locus:2092810 | 1164 | BRL3 "BRI1-like 3" [Arabidopsi | 0.302 | 0.140 | 0.398 | 5.2e-49 | |
| TAIR|locus:2040471 | 601 | SERK5 "somatic embryogenesis r | 0.775 | 0.693 | 0.290 | 2.1e-47 | |
| TAIR|locus:2020457 | 1166 | BRL1 "BRI1 like" [Arabidopsis | 0.302 | 0.139 | 0.396 | 7.7e-47 | |
| TAIR|locus:2182870 | 1192 | EMS1 "EXCESS MICROSPOROCYTES1" | 0.330 | 0.149 | 0.360 | 3.5e-46 | |
| TAIR|locus:2040461 | 620 | SERK4 "somatic embryogenesis r | 0.334 | 0.290 | 0.378 | 3.1e-43 | |
| TAIR|locus:2036636 | 632 | NIK3 "NSP-interacting kinase 3 | 0.340 | 0.289 | 0.364 | 2.6e-42 |
| TAIR|locus:2088937 AT3G28450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 984 (351.4 bits), Expect = 7.9e-129, Sum P(2) = 7.9e-129
Identities = 213/428 (49%), Positives = 272/428 (63%)
Query: 7 ATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEE 65
A EDD++CL G+K S DPQ L SW+ N+++GF+C F GVSCWN ENR+++LEL +
Sbjct: 28 AADEDDIRCLRGLKASLTDPQNALKSWNFDNTTLGFLCNFVGVSCWNNQENRVINLELRD 87
Query: 66 MNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHEL 125
M LSG++P+SLQ C SLQ L+LS+N L G IPT+LC W P+LV G IP +L
Sbjct: 88 MGLSGKIPDSLQYCASLQKLDLSSNRLSGNIPTELCNWLPFLVSLDLSNNELNGEIPPDL 147
Query: 126 GNCVYLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIPSFFNGAMKM--DMLA 183
C ++N+L LS NR RL +FSVA N LSGRIP FF+ D
Sbjct: 148 AKCSFVNSLVLSDNRLSGQIPVQFSALGRLGRFSVANNDLSGRIPVFFSSPSYSSDDFSG 207
Query: 184 DSRLGGANLGSKCCDLSKKKLXXXXXXXXXXXXPSLMLVFGLWLWNNLTRVSKRRKRGY- 242
+ L G L S C LSKK L S++L FG+W + +L + ++RR+ G
Sbjct: 208 NKGLCGRPLSSSCGGLSKKNLGIIIAAGVFGAAASMLLAFGIWWYYHL-KWTRRRRSGLT 266
Query: 243 EFDDCWV-ERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAML 301
E + +RL HKL +VSLF KPL+K+KL L+AAT+NF+++N++VST TGTTYKA+L
Sbjct: 267 EVGVSGLAQRLRSHKLTQVSLFQKPLVKVKLGDLMAATNNFNSENIIVSTRTGTTYKALL 326
Query: 302 LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGT 350
DGS LA+K LS CKLGE++F EM Q+ L+H NL EK LVYKYMSNGT
Sbjct: 327 PDGSALAVKHLSTCKLGEREFRYEMNQLWELRHSNLAPLLGFCVVEEEKFLVYKYMSNGT 386
Query: 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
L+SLL SN LDW +R RIGLGAARGL+W QNI SSVIL+DEDFDARI
Sbjct: 387 LHSLLDSNRGE-LDWSTRFRIGLGAARGLAWLHHGCRPPILHQNICSSVILIDEDFDARI 445
Query: 411 MDFGFSRL 418
+D G +RL
Sbjct: 446 IDSGLARL 453
|
|
| TAIR|locus:2205834 AT1G27190 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
Identities = 197/432 (45%), Positives = 266/432 (61%)
Query: 6 TATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELE 64
+++AEDDV CL G+K S DP +LSSWS NSS IC+ GVSCWN ENRI+SL+L+
Sbjct: 21 SSSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQ 80
Query: 65 EMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHE 124
M L+G++PESL+ C+SLQ L+LS N+L G IP+Q+C W PYLV G+IP +
Sbjct: 81 SMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQ 140
Query: 125 LGNCVYLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLAD 184
+ C +LN L LS N+ RL++ S+A N LSG IPS D +
Sbjct: 141 IVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPSELARFGGDDFSGN 200
Query: 185 SRLGGANLGSKCCDLSKKKLXXXXXXXXXXXXPSLMLVFGLWLWNNLTRVSKRRKRGY-- 242
+ L G L S+C L+ + L SL + ++ W + R R+K+GY
Sbjct: 201 NGLCGKPL-SRCGALNGRNLSIIIVAGVLGAVGSLCVGLVIFWWFFI-REGSRKKKGYGA 258
Query: 243 ---EFDDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKA 299
+ D W+ L HKLV+V+LF KP++K+KL L+AAT+NFS+ N+ VS+ TG +YKA
Sbjct: 259 GKSKDDSDWIGLLRSHKLVQVTLFQKPIVKIKLGDLMAATNNFSSGNIDVSSRTGVSYKA 318
Query: 300 MLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348
L DGS LA+KRLSAC GEKQF EM ++G L+HPNL E+ LVYK+M N
Sbjct: 319 DLPDGSALAVKRLSACGFGEKQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVN 378
Query: 349 GTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDF 406
GTL+S LH+ G + LDWP+R IG+GAA+GL+W Q ISS+VIL+D+DF
Sbjct: 379 GTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDF 438
Query: 407 DARIMDFGFSRL 418
DARI D+G ++L
Sbjct: 439 DARITDYGLAKL 450
|
|
| TAIR|locus:2020558 AT1G69990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 841 (301.1 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 193/450 (42%), Positives = 262/450 (58%)
Query: 9 AEDDVKCLAGIKS-FNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMN 67
AEDDV CL G KS DP +L++WS NSS IC+ GVSCWN ENRILSL+L+ M
Sbjct: 18 AEDDVLCLKGFKSSLKDPSNQLNTWSFPNSSSS-ICKLTGVSCWNAKENRILSLQLQSMQ 76
Query: 68 LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHELGN 127
LSGQ+PESL+ C+SLQ L+LS N+ G IP+Q+C W PYLV G+IP ++ +
Sbjct: 77 LSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPYLVTLDLSGNKLSGSIPSQIVD 136
Query: 128 CVYLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRL 187
C +LN+L L+ N+ RL++ S+A N LSG IPS + + + L
Sbjct: 137 CKFLNSLALNQNKLTGSIPSELTRLNRLQRLSLADNDLSGSIPSELSHYGEDGFRGNGGL 196
Query: 188 GGANLGSKCCDLSKKKLXXXXXXXXXXXXPSLMLVFGLWLWNNLTRVSKRRKRGYEFDDC 247
G L S C + K L SL + FG++ W + K GY C
Sbjct: 197 CGKPL-SNCGSFNGKNLTIIVTAGVIGAVGSLCVGFGMFWWFFIRDRRKMNNYGYGAGKC 255
Query: 248 -----WVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL 302
W+ L HKLV+V+LF KP++K+KLV LI AT+ F + N++VS+ +G +YKA L
Sbjct: 256 KDDSDWIGLLRSHKLVQVTLFQKPIVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLP 315
Query: 303 DGSMLAIKRLSAC-KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGT 350
DGS L +KRLS+C +L EKQF E+ ++G ++HPNL E LVYK+M+NGT
Sbjct: 316 DGSTLEVKRLSSCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGT 375
Query: 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARI 410
LYS L +DWP+R+R+ +GAARGL+W Q ISS+VIL+DEDFDAR+
Sbjct: 376 LYSQLQQ---WDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARV 432
Query: 411 MDFGFSRLTNGDASLQKDV-HG-FGVVLLE 438
+D+G +L + S +G FG V E
Sbjct: 433 IDYGLGKLVSSQDSKDSSFSNGKFGYVAPE 462
|
|
| TAIR|locus:2165981 BIR1 "AT5G48380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 599 (215.9 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 153/440 (34%), Positives = 224/440 (50%)
Query: 12 DVKCLAGIKS-FNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSG 70
++ CL KS DP LS+W N + G+IC+F+GV+CW+ ENR+LS++L L G
Sbjct: 31 NIDCLRTFKSQVEDPNRYLSTWVFGNETAGYICKFSGVTCWHDDENRVLSIKLSGYGLRG 90
Query: 71 QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXXXXGTIPHELGNCVY 130
P +++ C L L+LS NN G +P + P + G IP + N +
Sbjct: 91 VFPPAVKLCADLTGLDLSRNNFSGPLPANISTLIPLVTILDLSYNSFSGEIPMLISNITF 150
Query: 131 LNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIPSFFNGAM--KMDMLADSR-L 187
LNTL L +N+ RLK FSV+ N L G IP+F N + K ++ A++ L
Sbjct: 151 LNTLMLQHNQFTGTLPPQLAQLGRLKTFSVSDNRLVGPIPNF-NQTLQFKQELFANNLDL 209
Query: 188 GGANLGSKCCDLSKKKLXXXXXXXXXXXXPSLMLVFGLWLWNNLTRVSKRRKRGYEFD-D 246
G L C + + LV G+ L+ ++ RK+ + + +
Sbjct: 210 CGKPLDD--CKSASSSRGKVVIIAAVGGLTAAALVVGVVLFFYFRKLGAVRKKQDDPEGN 267
Query: 247 CWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSM 306
W + L K V+V +F K + K+KL L+ AT F N++ + TGT YK L DGS+
Sbjct: 268 RWAKSLKGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSL 327
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLL 355
L IKRL + EK+F EMK +G +K+ NL E+ L+Y+YM+NG LY L
Sbjct: 328 LMIKRLQDSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQL 387
Query: 356 HSNGNTA---LDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMD 412
H + LDWPSRL+I +G A+GL+W +NISS IL+ +F+ +I D
Sbjct: 388 HPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISD 447
Query: 413 FGFSRLTNG-DASLQKDVHG 431
FG +RL N D L V+G
Sbjct: 448 FGLARLMNPIDTHLSTFVNG 467
|
|
| TAIR|locus:2092810 BRL3 "BRI1-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 310 (114.2 bits), Expect = 5.2e-49, Sum P(3) = 5.2e-49
Identities = 71/178 (39%), Positives = 107/178 (60%)
Query: 258 VEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRL-SACK 316
+ V+ F KPL KL HL+ AT+ FSA +++ S G YKA L DGS++AIK+L
Sbjct: 834 INVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTG 893
Query: 317 LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSN---GNTA 362
G+++F+ EM+ +G +KH NL E+ LVY+YM G+L ++LH G
Sbjct: 894 QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIF 953
Query: 363 LDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTN 420
LDW +R +I +GAARGL++ +++ SS +L+D+DF AR+ DFG +RL +
Sbjct: 954 LDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVS 1011
|
|
| TAIR|locus:2040471 SERK5 "somatic embryogenesis receptor-like kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 368 (134.6 bits), Expect = 2.1e-47, Sum P(2) = 2.1e-47
Identities = 135/465 (29%), Positives = 200/465 (43%)
Query: 1 MSFTPTATAEDDVKCLAGIKSF----NDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLEN 56
+ F T + V L ++S + L SW+ T+ + C + V+C EN
Sbjct: 16 LDFVSRVTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTP---CSWFHVTC--NTEN 70
Query: 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVXXXXXXXX 116
+ L+L NLSG++ L +LQ L L NN+ G+IP +L LV
Sbjct: 71 SVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLME-LVSLDLFANN 129
Query: 117 XXGTIPHELGNCVYLNTLYLSYNRXXXXXXXXXXXXVRLKQFSVAYNCLSGRIPSFFNGA 176
G IP LG L L L YN + L ++ N LSG IP NG+
Sbjct: 130 ISGPIPSSLGKLGKLRFLRL-YNNSLSGEIPRSLTALPLDVLDISNNRLSGDIP--VNGS 186
Query: 177 MKMDMLADSRLGGANLGSKCCDLSKKKLXXXXXXXXXXXXPSLMLVFGLWLWNNLTRVSK 236
L + S + +L F L W +
Sbjct: 187 FSQ--FTSMSFANNKLRPRPASPSPSPSGTSAAIVVGVAAGAALL-FALAWW------LR 237
Query: 237 RRKRGYEFDDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTT 296
R+ +G+ F D E + ++L + L L+ AT FS +NVL G
Sbjct: 238 RKLQGH-FLDVPAEE-------DPEVYLGQFKRFSLRELLVATEKFSKRNVLGKGRFGIL 289
Query: 297 YKAMLLDGSMLAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343
YK L D +++A+KRL+ K GE QF E++ + + H NL E+ LVY
Sbjct: 290 YKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 349
Query: 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVIL 401
YM+NG++ S L GN ALDWP R I LG+ARGL++ ++ ++ IL
Sbjct: 350 PYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANIL 409
Query: 402 VDEDFDARIMDFGFSRLTN-GDASLQKDVHG-FGVVLLE-LVTGQ 443
+DE+F+A + DFG ++L N D+ + V G G + E L TG+
Sbjct: 410 LDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGK 454
|
|
| TAIR|locus:2020457 BRL1 "BRI1 like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 7.7e-47, Sum P(3) = 7.7e-47
Identities = 71/179 (39%), Positives = 108/179 (60%)
Query: 258 VEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK- 316
+ V+ F KPL KL HL+ AT+ FSA+ ++ S G YKA L DGS++AIK+L
Sbjct: 835 INVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITG 894
Query: 317 LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSN----GNT 361
G+++F+ EM+ +G +KH NL E+ LVY+YM G+L ++LH G
Sbjct: 895 QGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGI 954
Query: 362 ALDWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTN 420
L+W +R +I +GAARGL++ +++ SS +L+DEDF+AR+ DFG +RL +
Sbjct: 955 YLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVS 1013
|
|
| TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 294 (108.6 bits), Expect = 3.5e-46, Sum P(3) = 3.5e-46
Identities = 70/194 (36%), Positives = 115/194 (59%)
Query: 258 VEVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL 317
+ +++F +PL+K++L ++ AT +FS +N++ GT YKA L +A+K+LS K
Sbjct: 893 INIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKT 952
Query: 318 -GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL-YSLLHSNGNT-AL 363
G ++F+ EM+ +G +KHPNL EK LVY+YM NG+L + L + G L
Sbjct: 953 QGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVL 1012
Query: 364 DWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTNG-D 422
DW RL+I +GAARGL++ ++I +S IL+D DF+ ++ DFG +RL + +
Sbjct: 1013 DWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACE 1072
Query: 423 ASLQKDVHG-FGVV 435
+ + + G FG +
Sbjct: 1073 SHVSTVIAGTFGYI 1086
|
|
| TAIR|locus:2040461 SERK4 "somatic embryogenesis receptor-like kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 277 (102.6 bits), Expect = 3.1e-43, Sum P(3) = 3.1e-43
Identities = 75/198 (37%), Positives = 108/198 (54%)
Query: 264 LKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSA--CKLGEKQ 321
L L + L L+ AT NFS +NVL G YK L DG+++A+KRL K GE Q
Sbjct: 276 LGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQ 335
Query: 322 FLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSN--GNTALDWPSR 368
F E++ + + H NL E+ LVY YM+NG++ S L GN ALDWP R
Sbjct: 336 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKR 395
Query: 369 LRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTN-GDASLQK 427
I LG+ARGL++ +++ ++ IL+DE+F+A + DFG ++L N D+ +
Sbjct: 396 KHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTT 455
Query: 428 DVHG-FGVVLLE-LVTGQ 443
V G G + E L TG+
Sbjct: 456 AVRGTIGHIAPEYLSTGK 473
|
|
| TAIR|locus:2036636 NIK3 "NSP-interacting kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 254 (94.5 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 74/203 (36%), Positives = 110/203 (54%)
Query: 259 EVSLFLKPLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL- 317
EVSL L + L +AT++F+++N+L G YK L DG+++A+KRL C +
Sbjct: 280 EVSL--GHLKRYTFKELRSATNHFNSKNILGRGGYGIVYKGHLNDGTLVAVKRLKDCNIA 337
Query: 318 -GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSN--GNTAL 363
GE QF E++ + L H NL E+ LVY YM NG++ S L N G AL
Sbjct: 338 GGEVQFQTEVETISLALHRNLLRLRGFCSSNQERILVYPYMPNGSVASRLKDNIRGEPAL 397
Query: 364 DWPSRLRIGLGAARGLSWXXXXXXXXXXXQNISSSVILVDEDFDARIMDFGFSRLTNG-D 422
DW R +I +G ARGL + +++ ++ IL+DEDF+A + DFG ++L + D
Sbjct: 398 DWSRRKKIAVGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 457
Query: 423 ASLQKDVHG-FGVVLLE-LVTGQ 443
+ + V G G + E L TGQ
Sbjct: 458 SHVTTAVRGTVGHIAPEYLSTGQ 480
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | eugene3.00011934 | hypothetical protein (596 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 538 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-34 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-21 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-16 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-16 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-16 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-15 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 9e-15 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 9e-15 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-14 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-12 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-10 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-10 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 8e-10 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-09 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-09 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-09 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 2e-09 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 6e-09 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 9e-09 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-08 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 6e-08 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 1e-07 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 2e-07 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 4e-07 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 5e-07 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 5e-07 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 1e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-06 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-06 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 4e-06 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 5e-06 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 7e-06 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 2e-05 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 3e-05 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-05 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-05 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-05 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 6e-05 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 7e-05 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 8e-05 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-04 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 2e-04 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-04 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 2e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-04 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-04 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 3e-04 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 4e-04 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 7e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 7e-04 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 8e-04 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 0.001 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 0.001 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 0.001 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 0.002 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 0.002 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 0.002 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 0.002 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 0.002 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 0.003 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 0.003 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 0.004 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 0.004 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 1e-34
Identities = 136/499 (27%), Positives = 211/499 (42%), Gaps = 82/499 (16%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL--CKWFPYLVSLDLS 113
R+ +L+L SG VP L S L L LS N L G+IP +L CK LVSLDLS
Sbjct: 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCK---KLVSLDLS 531
Query: 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF- 172
+N LSG IP L+ L LS N+LSG +P L ++ L Q ++++N L G +PS
Sbjct: 532 HNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTG 591
Query: 173 -FNGAMKMDMLADSRLGGANLGS---KCCDLSKKKLAAIIAAGAFGAAPSLMLV-FGLWL 227
F + + L G + S C + K GA L LV FG
Sbjct: 592 AFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGF-- 649
Query: 228 WNNLTRVSKRRKRGYEF------DDCWVERLGVHKLVEVSLFLKPLIKLKLVHLIAATSN 281
V R + E D W E+ F + K ++ I S+
Sbjct: 650 ------VFIRGRNNLELKRVENEDGTW----------ELQFFDSKVSKSITINDI--LSS 691
Query: 282 FSAQNVLVSTWTGTTYKAMLLDGSM-LAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEKP 340
+NV+ G +YK + M +K ++ + +M G L+HPN+ K
Sbjct: 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADM---GKLQHPNIVKL 748
Query: 341 -----------LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP 389
L+++Y+ L +L + L W R +I +G A+ L +LH C P
Sbjct: 749 IGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPA 803
Query: 390 CLHQNISSSVILVDEDFDARI---------MDFGF----------SRLTNGDASLQKDVH 430
+ N+S I++D + + D +R T D + + D++
Sbjct: 804 VVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETK-DITEKSDIY 862
Query: 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG--YDDE 488
GFG++L+EL+TG+ P + E G G++V W S + ID ++ G +E
Sbjct: 863 GFGLILIELLTGKSPADA---EFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNE 919
Query: 489 ILQFLQIACKCVAVRPKEK 507
I++ + +A C A P +
Sbjct: 920 IVEVMNLALHCTATDPTAR 938
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 98.0 bits (244), Expect = 3e-21
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 8/162 (4%)
Query: 21 SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCK 80
S NDP LS+W+ + +C + G++C N +R++S++L N+SG++ ++
Sbjct: 40 SINDPLKYLSNWNSSAD----VCLWQGITCNN--SSRVVSIDLSGKNISGKISSAIFRLP 93
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNR 140
+Q +NLS N L G IP + L L+LSNN+ +G+IP G+ L TL LS N
Sbjct: 94 YIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNM 151
Query: 141 LSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182
LSG +P + S LK + N L G+IP+ ++ L
Sbjct: 152 LSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFL 193
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 2e-16
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+L+L LSG++P + S SL+VL+L N L GKIP L L L L++N L G
Sbjct: 144 TLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTN-LTSLEFLTLASNQLVG 202
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
IP ELG L +YL YN LSG +P ++ L L + YN L+G IPS
Sbjct: 203 QIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPS 254
|
Length = 968 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 2e-16
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 46/197 (23%)
Query: 294 GTTYKAMLLDGSML-----AIKRLSACKLGE--KQFLLEMKQVGLLKHPNL--------- 337
G YK L A+K L + ++FL E + + L HPN+
Sbjct: 13 GEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTE 72
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
E+PL V +YM G L L N L L L ARG+ +L +H+++
Sbjct: 73 EEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDL 129
Query: 396 SSSVILVDEDFDARIMDFGFSRLTNGDA-----------------SLQK-------DVHG 431
++ LV E+ +I DFG SR D SL++ DV
Sbjct: 130 AARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWS 189
Query: 432 FGVVLLELVT-GQKPFE 447
FGV+L E+ T G++P+
Sbjct: 190 FGVLLWEIFTLGEEPYP 206
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 9e-16
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT 120
L L L GQ+P L KSL+ + L NNL G+IP ++ L LDL N+L+G
Sbjct: 193 LTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG-LTSLNHLDLVYNNLTGP 251
Query: 121 IPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170
IP LGN L L+L N+LSGP+PP + SL +L ++ N LSG IP
Sbjct: 252 IPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301
|
Length = 968 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 2e-15
Identities = 52/204 (25%), Positives = 75/204 (36%), Gaps = 53/204 (25%)
Query: 294 GTTYKAMLLDGS----MLAIKRLSACKLGE--KQFLLEMKQVGLLKHPNL---------E 338
G YK L +A+K L E K FL E + + L HPN+ E
Sbjct: 9 GEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE 68
Query: 339 KP--LVYKYMSNGTLYSLLHSNGNTA-------LDWPSRLRIGLGAARGLSWLHHCCHPP 389
+P LV +YM G L L + L L + A+G+ +L
Sbjct: 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---K 125
Query: 390 CLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHG------------------ 431
+H+++++ LV ED +I DFG SR D +K G
Sbjct: 126 FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFT 185
Query: 432 -------FGVVLLELVT-GQKPFE 447
FGV+L E+ T G P+
Sbjct: 186 SKSDVWSFGVLLWEIFTLGATPYP 209
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Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 3e-15
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
+++SL+L + +LSG++PE + ++L++L+L +NN GKIP L P L L L +N
Sbjct: 285 KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTS-LPRLQVLQLWSNK 343
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170
SG IP LG L L LS N L+G +P L S L + + N L G IP
Sbjct: 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIP 397
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 7e-15
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
R+ L+L SG++P++L +L VL+LSTNNL G+IP LC L L L +N
Sbjct: 333 RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS-SGNLFKLILFSNS 391
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176
L G IP LG C L + L N SG LP + + L + ++ N L GRI S
Sbjct: 392 LEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451
Query: 177 MKMDMLADSR----------LGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLM 220
+ ML+ +R G L + DLS+ + + + G+ LM
Sbjct: 452 PSLQMLSLARNKFFGGLPDSFGSKRL--ENLDLSRNQFSGAVPRK-LGSLSELM 502
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 9e-15
Identities = 52/185 (28%), Positives = 73/185 (39%), Gaps = 43/185 (23%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE--KQFLLEMKQVGLLKHPNLEKP---------- 340
GT Y A G +AIK + ++ L E++ + L HPN+ K
Sbjct: 7 GTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHL 66
Query: 341 -LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
LV +Y G+L LL N L LRI L GL +LH +H+++
Sbjct: 67 YLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLHSN---GIIHRDLKPEN 122
Query: 400 ILVDEDFD-ARIMDFGFSRLTNGDASLQKDVHG------------------------FGV 434
IL+D D ++ DFG S+L D SL K + G GV
Sbjct: 123 ILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGV 182
Query: 435 VLLEL 439
+L EL
Sbjct: 183 ILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 73.7 bits (182), Expect = 9e-15
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 294 GTTYKAMLLDGSML-----AIKRLSACKLGE--KQFLLEMKQVGLLKHPNL--------- 337
G YK L A+K L + ++FL E + + L HPN+
Sbjct: 13 GEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTE 72
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
E+PL V +YM G L S L N L L L ARG+ +L +H+++
Sbjct: 73 EEPLYIVMEYMEGGDLLSYLRKNRPK-LSLSDLLSFALQIARGMEYLESK---NFIHRDL 128
Query: 396 SSSVILVDEDFDARIMDFGFSRLTNGDA-----------------SLQK-------DVHG 431
++ LV E+ +I DFG SR D SL++ DV
Sbjct: 129 AARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWS 188
Query: 432 FGVVLLELVT-GQKPFE 447
FGV+L E+ T G++P+
Sbjct: 189 FGVLLWEIFTLGEQPYP 205
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 72.9 bits (180), Expect = 2e-14
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 54/200 (27%)
Query: 294 GTTYKAMLLDGSML-----AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL------ 337
G YK L A+K L A + ++FL E MK+ L HPN+
Sbjct: 13 GEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKK---LSHPNIVRLLGV 69
Query: 338 ---EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392
+PL V +YM G L L +G L L++ L A+G+ +L +H
Sbjct: 70 CTQGEPLYIVTEYMPGGDLLDFLRKHGE-KLTLKDLLQMALQIAKGMEYLESK---NFVH 125
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK------------------------- 427
+++++ LV E+ +I DFG SR D +K
Sbjct: 126 RDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKS 185
Query: 428 DVHGFGVVLLELVT-GQKPF 446
DV FGV+L E+ T G++P+
Sbjct: 186 DVWSFGVLLWEIFTLGEQPY 205
|
Length = 258 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 4e-14
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT 120
L+L NL+G +P SL + K+LQ L L N L G IP + L+SLDLS+N LSG
Sbjct: 241 LDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS-LQKLISLDLSDNSLSGE 299
Query: 121 IPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170
IP + L L+L N +G +P L+SL RL+ + N SG IP
Sbjct: 300 IPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 7e-14
Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT 120
L L N +G++P +L S LQVL L +N G+IP L K V LDLS N+L+G
Sbjct: 313 LHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTV-LDLSTNNLTGE 371
Query: 121 IPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
IP L + L L L N L G +P L + L++ + N SG +PS F
Sbjct: 372 IPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEF 424
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 60/235 (25%), Positives = 89/235 (37%), Gaps = 52/235 (22%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGEKQF---LLEMKQVGLLKHPNL--------EKP- 340
GT YKA G ++A+K L K+ E++ + L HPN+ +K
Sbjct: 13 GTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDH 72
Query: 341 --LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
LV +Y G L+ L G L +I L RGL +LH +H+++
Sbjct: 73 LYLVMEYCEGGDLFDYLSRGGP--LSEDEAKKIALQILRGLEYLHSN---GIIHRDLKPE 127
Query: 399 VILVDEDFDARIMDFGFSRLTNGDASLQK------------------------DVHGFGV 434
IL+DE+ +I DFG ++ +S DV GV
Sbjct: 128 NILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGV 187
Query: 435 VLLELVTGQKPF--EINASEE------GYKGNLVNWIDQLSSSGRIKDVIDKALT 481
+L EL+TG+ PF E + + S S KD+I K L
Sbjct: 188 ILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLN 242
|
Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 3e-13
Identities = 46/130 (35%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 37 SSVGFICRF--NGVSC------WNGLENR---------ILSLELEEMNLSGQVPESLQSC 79
SS+G RF NG C W+G + + I L L+ L G +P +
Sbjct: 382 SSLGLPLRFGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKL 441
Query: 80 KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139
+ LQ +NLS N++ G IP L L LDLS N +G+IP LG L L L+ N
Sbjct: 442 RHLQSINLSGNSIRGNIPPSLGS-ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500
Query: 140 RLSGPLPPQL 149
LSG +P L
Sbjct: 501 SLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 4e-12
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 85 LNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGP 144
L L L G IP + K +L S++LS N + G IP LG+ L L LSYN +G
Sbjct: 423 LGLDNQGLRGFIPNDISK-LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481
Query: 145 LPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
+P L L L+ ++ N LSGR+P+ G
Sbjct: 482 IPESLGQLTSLRILNLNGNSLSGRVPAALGG 512
|
Length = 623 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 2e-10
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 42/191 (21%)
Query: 304 GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEKPL----------VYKYMSNGTLYS 353
G +A+K + C + + FL E + L H NL + L V + MS G L +
Sbjct: 29 GQKVAVKNIK-CDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVN 87
Query: 354 LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413
L + G + L+ L A G+ +L +H+++++ ILV ED A++ DF
Sbjct: 88 FLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDF 144
Query: 414 GFSR--------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF------ 446
G +R L + S + DV +GV+L E+ + G+ P+
Sbjct: 145 GLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK 204
Query: 447 EIN-ASEEGYK 456
E+ E+GY+
Sbjct: 205 EVKECVEKGYR 215
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 3e-10
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 47/209 (22%)
Query: 273 VHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL 332
+ LI N V + TW G T +A+K L + + FL E + + L
Sbjct: 8 LQLIKKLGNGQFGEVWMGTWNGNT---------KVAVKTLKPGTMSPESFLEEAQIMKKL 58
Query: 333 KHPNL--------EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL 382
+H L E+P+ V +YMS G+L L AL P+ + + A G++++
Sbjct: 59 RHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 118
Query: 383 HHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN---------------------- 420
+ +H+++ S+ ILV + +I DFG +RL
Sbjct: 119 ERMNY---IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 175
Query: 421 --GDASLQKDVHGFGVVLLELVT-GQKPF 446
G +++ DV FG++L ELVT G+ P+
Sbjct: 176 LYGRFTIKSDVWSFGILLTELVTKGRVPY 204
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 5e-10
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 54/212 (25%)
Query: 287 VLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------E 338
V + TW GTT +AIK L + + FL E + + L+H L E
Sbjct: 22 VWMGTWNGTT---------RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 72
Query: 339 KPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396
+P+ V +YMS G+L L L P + + A G++++ + +H+++
Sbjct: 73 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLR 129
Query: 397 SSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGF 432
++ ILV E+ ++ DFG +RL G +++ DV F
Sbjct: 130 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189
Query: 433 GVVLLELVT-GQKPFE-------INASEEGYK 456
G++L EL T G+ P+ ++ E GY+
Sbjct: 190 GILLTELTTKGRVPYPGMVNREVLDQVERGYR 221
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 8e-10
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 61/216 (28%)
Query: 287 VLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLE---MKQVGLLKHPNL------ 337
V + TW GTT +A+K L + + FL E MK+ L+H L
Sbjct: 22 VWMGTWNGTT---------KVAVKTLKPGTMSPEAFLQEAQIMKK---LRHDKLVQLYAV 69
Query: 338 ---EKP--LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392
E+P +V +YMS G+L L S L P + + A G+++L + +H
Sbjct: 70 CSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY---IH 126
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDA------------------------SLQKD 428
+++++ ILV E+ +I DFG +RL D +++ D
Sbjct: 127 RDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSD 186
Query: 429 VHGFGVVLLELVT-GQKPFE-------INASEEGYK 456
V FG++L E+VT G+ P+ + E GY+
Sbjct: 187 VWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR 222
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 294 GTTYKAMLLD-GSMLAIK--RLSACKLGEKQFLLEMKQVGLLKHPNL-------EKP--- 340
G Y A G ++AIK + K ++ L E+K + LKHPN+ E
Sbjct: 13 GKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKL 72
Query: 341 -LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
LV +Y G L+ LL G + D L +LH +H+++
Sbjct: 73 YLVMEYCEGGDLFDLLKKRGRLSEDE--ARFYLRQILSALEYLHSKG---IVHRDLKPEN 127
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK----------------------DVHGFGVVLL 437
IL+DED ++ DFG +R + L D+ GV+L
Sbjct: 128 ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILY 187
Query: 438 ELVTGQKPFE 447
EL+TG+ PF
Sbjct: 188 ELLTGKPPFP 197
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-09
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRL-SACKLGEKQFLLEMKQVGLLKHPNL- 337
F+ + L S + G ++ + + +AIK L S L ++ F E++ + L+H +L
Sbjct: 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI 65
Query: 338 --------EKP--LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCH 387
+P ++ + M G+L + L S L S + + A G+++L
Sbjct: 66 SLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE--- 122
Query: 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDA-----------------------S 424
+H+++++ ILV ED ++ DFG +RL D S
Sbjct: 123 QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFS 182
Query: 425 LQKDVHGFGVVLLELVT-GQKPFEINASEEGY 455
+ DV FG++L E+ T GQ P+ + E Y
Sbjct: 183 TKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY 214
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 46/197 (23%)
Query: 293 TGTTYKAMLLDGSM-LAIKR--LSACKLGEKQFLLEMKQVGLLKHPNLEKP--------- 340
T Y A+ L + +AIKR L C+ + E++ + HPN+ K
Sbjct: 14 TAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDE 73
Query: 341 --LVYKYMSNGTLYSLL-HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
LV Y+S G+L ++ S LD + +GL +LH +H++I +
Sbjct: 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ---IHRDIKA 130
Query: 398 SVILVDEDFDARIMDFGFSR--LTNGDASLQ-----------------KDVHG------- 431
IL+ ED +I DFG S GD + + + VHG
Sbjct: 131 GNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADI 190
Query: 432 --FGVVLLELVTGQKPF 446
FG+ +EL TG P+
Sbjct: 191 WSFGITAIELATGAAPY 207
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 48/191 (25%)
Query: 292 WTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP-- 340
W TT +A+K L + K FL E + + L+HP L E+P
Sbjct: 27 WNNTT---------PVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
+V + M G+L L AL P + + A G+++L + +H+++++ +
Sbjct: 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY---IHRDLAARNV 134
Query: 401 LVDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVL 436
LV E+ ++ DFG +R+ D S++ DV FG++L
Sbjct: 135 LVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILL 194
Query: 437 LELVT-GQKPF 446
E+VT G+ P+
Sbjct: 195 TEIVTYGRMPY 205
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 57.8 bits (139), Expect = 2e-09
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 47/195 (24%)
Query: 287 VLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------E 338
V + TW GTT +AIK L + + FL E + + L+H L E
Sbjct: 22 VWMGTWNGTT---------KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE 72
Query: 339 KPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396
+P+ V ++M G+L L L P + + A G++++ + +H+++
Sbjct: 73 EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY---IHRDLR 129
Query: 397 SSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGF 432
++ ILV ++ +I DFG +RL G +++ DV F
Sbjct: 130 AANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189
Query: 433 GVVLLELVT-GQKPF 446
G++L ELVT G+ P+
Sbjct: 190 GILLTELVTKGRVPY 204
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 6e-09
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 62/217 (28%)
Query: 294 GTTYKAMLLDGS----MLAIKRLSACKLGEKQ---FLLEMKQVGLLKHPN---LE----- 338
G + L +AIK L A +KQ FL E +G HPN LE
Sbjct: 18 GEVCRGRLKLPGKKEIDVAIKTLKA-GSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK 76
Query: 339 -KPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
+P+ + +YM NG+L L N + + + G A G+ +L + +H+++
Sbjct: 77 SRPVMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNY---VHRDL 132
Query: 396 SSSVILVDEDFDARIMDFGFSRL---------TNG-------------------DASLQK 427
++ ILV+ + ++ DFG SR T G AS
Sbjct: 133 AARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSAS--- 189
Query: 428 DVHGFGVVLLELVT-GQKPFE-------INASEEGYK 456
DV FG+V+ E+++ G++P+ I A E+GY+
Sbjct: 190 DVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 9e-09
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 39/179 (21%)
Query: 304 GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLY 352
+A+K L + ++FL E + +KHPNL E P ++ ++M+ G L
Sbjct: 31 SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 90
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412
L ++ L + + + +L +H+++++ LV E+ ++ D
Sbjct: 91 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVAD 147
Query: 413 FGFSRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
FG SRL GD S++ DV FGV+L E+ T G P+
Sbjct: 148 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 206
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 42/192 (21%)
Query: 304 GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLY 352
G +A+K L + FL E + L+HPNL PL V +YM+ G+L
Sbjct: 29 GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLV 88
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412
L S G + +L L G+ +L +H+++++ +LV ED A++ D
Sbjct: 89 DYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSD 145
Query: 413 FGFSR--------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE---- 447
FG ++ L S + DV FG++L E+ + G+ P+
Sbjct: 146 FGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205
Query: 448 ---INASEEGYK 456
+ E+GY+
Sbjct: 206 KDVVPHVEKGYR 217
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 4e-08
Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 41/207 (19%)
Query: 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---------LGEKQFLLEMKQVG 330
+F N + G +K + D + A+K++ K + E + L ++
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 331 LLKHPN--LEKPLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC 385
++++ L+K + +Y NG L+ LL L R + GL+ LH
Sbjct: 61 IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS- 119
Query: 386 CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK------------------ 427
LH++I S + +D + +I D G ++L + + +
Sbjct: 120 --KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKP 177
Query: 428 -----DVHGFGVVLLELVTGQKPFEIN 449
DV GVVL E TG+ PF+ N
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDAN 204
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 5e-08
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 51/195 (26%)
Query: 307 LAIKRLSACKLGEKQFLLE---MKQVGLLKHPNL--------EKPL--VYKYMSNGTLYS 353
+AIK L + + FL E MKQ L+HP L ++P+ + +YM NG+L
Sbjct: 33 VAIKSLKQGSMSPEAFLAEANLMKQ---LQHPRLVRLYAVVTQEPIYIITEYMENGSLVD 89
Query: 354 LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413
L + L + + A G++++ + +H+++ ++ ILV E +I DF
Sbjct: 90 FLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY---IHRDLRAANILVSETLCCKIADF 146
Query: 414 GFSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE- 447
G +RL G +++ DV FG++L E+VT G+ P+
Sbjct: 147 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPG 206
Query: 448 ------INASEEGYK 456
I E GY+
Sbjct: 207 MTNPEVIQNLERGYR 221
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 293 TGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLL-EMKQVGLLKHPNL-----------EK 339
G YKA G +AIK + +K+ ++ E++ + KHPN+ E
Sbjct: 13 FGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDEL 72
Query: 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH--HCCHPPCLHQNISS 397
+V ++ S G+L LL S T L + +GL +LH +H++I +
Sbjct: 73 WIVMEFCSGGSLKDLLKSTNQT-LTESQIAYVCKELLKGLEYLHSNGI-----IHRDIKA 126
Query: 398 SVILVDEDFDARIMDFGFS-RLTNGDA---------------------SLQKDVHGFGVV 435
+ IL+ D + +++DFG S +L++ A + D+ G+
Sbjct: 127 ANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGIT 186
Query: 436 LLELVTGQKPF 446
+EL G+ P+
Sbjct: 187 AIELAEGKPPY 197
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 57/200 (28%)
Query: 307 LAIKRLSACKLGEKQ---FLLEMKQVGLLKHPN---LE------KP--LVYKYMSNGTLY 352
+AIK L A EKQ FL E +G HPN LE KP +V +YM NG+L
Sbjct: 35 VAIKTLKA-GYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 93
Query: 353 SLL--HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410
+ L H T + LR G A G+ +L + +H+++++ ILV+ + ++
Sbjct: 94 AFLRKHDGQFTVIQLVGMLR---GIASGMKYLSDMGY---VHRDLAARNILVNSNLVCKV 147
Query: 411 MDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQ 443
DFG SR+ D + DV +G+V+ E+++ G+
Sbjct: 148 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 207
Query: 444 KPF-------EINASEEGYK 456
+P+ I A EEGY+
Sbjct: 208 RPYWEMSNQDVIKAIEEGYR 227
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 37/153 (24%)
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
L+ +Y + G L +L + L + ++L + + +GL L+ + P ++N++S
Sbjct: 99 LILEYCTRGYLREVLDKEKD--LSFKTKLDMAIDCCKGLYNLYKYTNKP--YKNLTSVSF 154
Query: 401 LVDED---------------------------FDARIMDFGFSRLTNGDASLQKDVHGFG 433
LV E+ F ++++ FS T ++ D++ G
Sbjct: 155 LVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYT-----IKDDIYSLG 209
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466
VVL E+ TG+ PFE N + + ++N + L
Sbjct: 210 VVLWEIFTGKIPFE-NLTTKEIYDLIINKNNSL 241
|
Length = 283 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 46/206 (22%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--V 342
G + + + +A+K L + + FL E + L+H L E+P+ +
Sbjct: 20 GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 79
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
+YM+ G+L L S+ + P + A G++++ + +H+++ ++ +LV
Sbjct: 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY---IHRDLRAANVLV 136
Query: 403 DEDFDARIMDFGFSRLTN------------------------GDASLQKDVHGFGVVLLE 438
E +I DFG +R+ G +++ DV FG++L E
Sbjct: 137 SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYE 196
Query: 439 LVT-GQKPFE-------INASEEGYK 456
+VT G+ P+ ++A + GY+
Sbjct: 197 IVTYGKIPYPGMSNSDVMSALQRGYR 222
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 5e-07
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 43/192 (22%)
Query: 294 GTTYKAMLLDGSMLAIK--RLSACKLGEKQFLLEMKQVGLLKHPNLEK---------PL- 341
G YK +L + +A+K R + +++FL E + + HPN+ K P+
Sbjct: 9 GDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIY 68
Query: 342 -VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
V + + G+L + L N L L++ L AA G+ +L C+H+++++
Sbjct: 69 IVMELVPGGSLLTFLRKKKN-RLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNC 124
Query: 401 LVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVV 435
LV E+ +I DFG SR L G + + DV +G++
Sbjct: 125 LVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGIL 184
Query: 436 LLELVT-GQKPF 446
L E + G P+
Sbjct: 185 LWETFSLGDTPY 196
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 5e-07
Identities = 58/271 (21%), Positives = 95/271 (35%), Gaps = 89/271 (32%)
Query: 294 GTTYKAMLLD-GSMLAIK--RLSACKLGEKQFLLE----MKQVGLLKHPNL--------- 337
G+ Y A+ D G ++A+K LS E + L + L+HPN+
Sbjct: 14 GSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS---LQHPNIVRYYGSERD 70
Query: 338 EKPLVYK----YMSNGTLYSLLHSNGNTALDWP---SRLRIGLGAARGLSWLH-----HC 385
E+ Y+S G+L SLL G L P R L GL++LH H
Sbjct: 71 EEKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQIL---EGLAYLHSNGIVHR 125
Query: 386 CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDA------------------SLQK 427
+I + ILVD D ++ DFG ++ ++
Sbjct: 126 --------DIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG 177
Query: 428 DVHG-------FGVVLLELVTGQKPFEI--NASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478
+ +G G ++E+ TG+ P+ N YK ++
Sbjct: 178 EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPE---------- 227
Query: 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWS 509
+E FL+ KC+ PK++ +
Sbjct: 228 -----HLSEEAKDFLR---KCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKPLVYKYMSNG 349
G K G ++AIK+ + E K L E+K + L+H N+ L + G
Sbjct: 15 GVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVN-LKEAFRRKG 73
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAA--RGLSW-----LHHCCHPPCLHQNISSSVILV 402
LY + T L+ GL R W + +C +H++I ILV
Sbjct: 74 RLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV 133
Query: 403 DEDFDARIMDFGFSR 417
E ++ DFGF+R
Sbjct: 134 SESGVLKLCDFGFAR 148
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
S+ L ++ G +P SL S SL+VL+LS N+ G IP L + L L+L+ N LSG
Sbjct: 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQ-LTSLRILNLNGNSLSG 504
Query: 120 TIPHELG 126
+P LG
Sbjct: 505 RVPAALG 511
|
Length = 623 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 49.0 bits (118), Expect = 2e-06
Identities = 45/202 (22%), Positives = 68/202 (33%), Gaps = 57/202 (28%)
Query: 293 TGTTYKAM-LLDGSMLAIKRLSACKLGEKQ---FLLEMKQVGLLKHPN--------LEKP 340
G Y DG + +K + + EK+ L E+K + L HPN EK
Sbjct: 13 FGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKG 72
Query: 341 LVY---KYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHP- 388
+ +Y G L + LDW +L + L H
Sbjct: 73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLAL----------KYLHSR 122
Query: 389 PCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK--------------------- 427
LH++I I + + ++ DFG S++ + L K
Sbjct: 123 KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNY 182
Query: 428 --DVHGFGVVLLELVTGQKPFE 447
D+ G VL EL T + PFE
Sbjct: 183 KSDIWSLGCVLYELCTLKHPFE 204
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 60/195 (30%)
Query: 307 LAIKRLSACKLGEKQ--FLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYS 353
+AIK L + Q F E + + L+HPN+ E+P +++Y+++G L+
Sbjct: 38 VAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHE 97
Query: 354 LLHSN--------------GNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISS 397
L N ++LD L I + A G+ +L HH H +++++
Sbjct: 98 FLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVH-----RDLAA 152
Query: 398 SVILVDEDFDARIMDFGFSRLT-------------------------NGDASLQKDVHGF 432
LV E +I DFG SR G + + D+ F
Sbjct: 153 RNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF 212
Query: 433 GVVLLELVT-GQKPF 446
GVVL E+ + G +P+
Sbjct: 213 GVVLWEIFSYGLQPY 227
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 45/192 (23%)
Query: 294 GTTYKAML-LDGSMLAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNL-------EKP--- 340
G YK G + A+K++ + KQ L E+K + + P + K
Sbjct: 15 GVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEI 74
Query: 341 -LVYKYMSNGTLYSLLHSNGNTALDWPSRL--RIGLGAARGLSWLHHCCHPPCLHQNISS 397
+V +YM G+L LL G P + I +GL +LH H +H++I
Sbjct: 75 SIVLEYMDGGSLADLLKKVGK----IPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKP 128
Query: 398 SVILVDEDFDARIMDFGFSR-LTNGDA----------------------SLQKDVHGFGV 434
S +L++ + +I DFG S+ L N S D+ G+
Sbjct: 129 SNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGL 188
Query: 435 VLLELVTGQKPF 446
LLE G+ PF
Sbjct: 189 TLLECALGKFPF 200
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 46/179 (25%)
Query: 308 AIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSLLH 356
AIK + + E F+ E K + L HPNL ++P+ V +YM+NG L + L
Sbjct: 32 AIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLR 91
Query: 357 SN---GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413
T L + + +L +H+++++ LV ED ++ DF
Sbjct: 92 ERKGKLGTEW----LLDMCSDVCEAMEYLESNGF---IHRDLAARNCLVGEDNVVKVSDF 144
Query: 414 GFSR------------------------LTNGDASLQKDVHGFGVVLLELVTGQK-PFE 447
G +R S + DV FGV++ E+ + K P+E
Sbjct: 145 GLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE 203
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 7e-06
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 59/202 (29%)
Query: 307 LAIKRLSACKLGEKQ---FLLEMKQVGLLKHPNL---------EKP--LVYKYMSNGTLY 352
+AIK L + EKQ FL E +G HPN+ +P ++ ++M NG L
Sbjct: 35 VAIKTLKS-GYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALD 93
Query: 353 SLLHSNGN--TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410
S L N T + LR G A G+ +L + +H+++++ ILV+ + ++
Sbjct: 94 SFLRQNDGQFTVIQLVGMLR---GIAAGMKYLSEMNY---VHRDLAARNILVNSNLVCKV 147
Query: 411 MDFGFSRLTNGDAS----------------------------LQKDVHGFGVVLLELVT- 441
DFG SR D S DV +G+V+ E+++
Sbjct: 148 SDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 207
Query: 442 GQKPF-------EINASEEGYK 456
G++P+ INA E+ Y+
Sbjct: 208 GERPYWDMSNQDVINAIEQDYR 229
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 40/196 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKP--LV 342
G + L+ +AIK + + E+ F+ E + + L HP L P LV
Sbjct: 18 GLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
+++M +G L L + + L + L G+++L +H+++++ LV
Sbjct: 78 FEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLV 133
Query: 403 DEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLLE 438
E+ ++ DFG +R D S + DV FGV++ E
Sbjct: 134 GENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWE 193
Query: 439 LVT-GQKPFEINASEE 453
+ + G+ P+E ++ E
Sbjct: 194 VFSEGKTPYENRSNSE 209
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 2e-05
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 54/214 (25%)
Query: 280 SNFSAQNVLVSTWTGTTYKAML-LDG---SMLAIKRLSACKLGEKQ---FLLEMKQVGLL 332
S+ + Q V+ + G ++ +L + G +AIK L EKQ FL E +G
Sbjct: 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKP-GYTEKQRQDFLSEASIMGQF 63
Query: 333 KHPN---LE------KP--LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGL--GAARGL 379
H N LE KP ++ +YM NG L L + ++ S +G+ G A G+
Sbjct: 64 SHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDG---EFSSYQLVGMLRGIAAGM 120
Query: 380 SWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDA---------------- 423
+L + +H+++++ ILV+ + + ++ DFG SR+ D
Sbjct: 121 KYLSDMNY---VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWT 177
Query: 424 -----SLQK-----DVHGFGVVLLELVT-GQKPF 446
+ +K DV FG+V+ E+++ G++P+
Sbjct: 178 APEAIAYRKFTSASDVWSFGIVMWEVMSFGERPY 211
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 45/243 (18%), Positives = 100/243 (41%), Gaps = 50/243 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VY 343
G + A + +A+K + + + FL E + L+H L ++P+ +
Sbjct: 20 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT 79
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
++M+ G+L L S+ + P + A G++++ + +H+++ ++ ILV
Sbjct: 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANILVS 136
Query: 404 EDFDARIMDFGFSRLTN------------------------GDASLQKDVHGFGVVLLEL 439
+I DFG +R+ G +++ DV FG++L+E+
Sbjct: 137 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 196
Query: 440 VT-GQKPFE-------INASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQ 491
VT G+ P+ I A E GY+ + + +++ + + + +
Sbjct: 197 VTYGRIPYPGMSNPEVIRALERGYRMPRPE-----NCPEELYNIMMRCWKNRPEERPTFE 251
Query: 492 FLQ 494
++Q
Sbjct: 252 YIQ 254
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 46.3 bits (108), Expect = 3e-05
Identities = 56/269 (20%), Positives = 92/269 (34%), Gaps = 61/269 (22%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGE----KQFLLEMKQVGLLKHPNL------------ 337
G Y A D ++A+K L+ + ++FL E++ + L HP
Sbjct: 14 GEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG 71
Query: 338 EKPLVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396
LV +Y+ G+L LL G L L I L +LH +H++I
Sbjct: 72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIK 128
Query: 397 SSVILVDED-FDARIMDFGFSRL--------------------------------TNGDA 423
IL+D D +++DFG ++L + A
Sbjct: 129 PENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYA 188
Query: 424 SLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483
S D+ G+ L EL+TG PFE + + I +L + +
Sbjct: 189 SSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ-TLKIILELPTPSLASPLSP-----S 242
Query: 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQ 512
+ + K +A PK + S
Sbjct: 243 NPELISKAASDLLKKLLAKDPKNRLSSSS 271
|
Length = 384 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 59 LSLELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSN 114
L L+E++LS +P L++ +L+ L+LS N+L +P L L +LDLS
Sbjct: 138 LKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSN-LSNLNNLDLSG 195
Query: 115 NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
N +S +P E+ L L LS N + L LS+L L ++ N
Sbjct: 196 NKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNN 242
|
Length = 394 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 31/166 (18%)
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
LV +Y++ G SL+ + G DW + A + + +H++I +
Sbjct: 74 LVMEYLNGGDCASLIKTLGGLPEDWAKQY-----IAEVVLGVEDLHQRGIIHRDIKPENL 128
Query: 401 LVDEDFDARIMDFGFSR--------------------LTNGDASLQKDVHGFGVVLLELV 440
L+D+ ++ DFG SR L GD D G V+ E +
Sbjct: 129 LIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDK-MSDWWSLGCVIFEFL 187
Query: 441 TGQKPFEINASEEGYK---GNLVNWIDQL--SSSGRIKDVIDKALT 481
G PF + + +NW +++ S D+I++ L
Sbjct: 188 FGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLC 233
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 43/177 (24%)
Query: 320 KQFLLEMKQVGLLKHPNLEKPL------------VYKYMSNGTLYSLLHSNGNTALDWPS 367
+ FL E + L+H NL + L V +YM+ G+L L S G + L
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 368 RLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR---------- 417
L+ L + +L +H+++++ +LV ED A++ DFG ++
Sbjct: 104 LLKFSLDVCEAMEYLEANNF---VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160
Query: 418 ----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE-------INASEEGYK 456
L S + DV FG++L E+ + G+ P+ + E+GYK
Sbjct: 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 217
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 57/198 (28%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNLEKPL-------- 341
G YK + L G +AIK++S K+ E+ M+++ LLK HPN+ K +
Sbjct: 14 GVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDS 73
Query: 342 ---VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAAR-------GLSWLHHCCHPPCL 391
+ +Y NG+L ++ G +P L A GL++LH +
Sbjct: 74 LYIILEYAENGSLRQIIKKFGP----FPESL-----VAVYVYQVLQGLAYLH---EQGVI 121
Query: 392 HQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHG-------------------- 431
H++I ++ IL +D ++ DFG + N + V G
Sbjct: 122 HRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASD 181
Query: 432 ---FGVVLLELVTGQKPF 446
G ++EL+TG P+
Sbjct: 182 IWSLGCTVIELLTGNPPY 199
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 47/160 (29%)
Query: 332 LKHPNL-----------EKPLV-YKYMSNGTLYSLLHS------NGNTALDWPSRLRIGL 373
L H N+ E P V Y YM+ G L L N AL + + +
Sbjct: 65 LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAI 124
Query: 374 GAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR---------------- 417
A G+S+LH +H++I++ ++DE+ +I D SR
Sbjct: 125 QIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENR 181
Query: 418 ---------LTNGDASLQKDVHGFGVVLLELVT-GQKPFE 447
L N + S DV FGV+L EL+T GQ P+
Sbjct: 182 PVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYV 221
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 41/183 (22%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSLL 355
+AIK + + E +F+ E K + L H L ++P+ V +YMSNG L + L
Sbjct: 31 VAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYL 90
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415
+G L + G+++L +H+++++ LVD+ ++ DFG
Sbjct: 91 REHGK-RFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGL 146
Query: 416 SRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPFE-IN 449
SR D S + DV FGV++ E+ + G+ P+E N
Sbjct: 147 SRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN 206
Query: 450 ASE 452
SE
Sbjct: 207 NSE 209
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 53/198 (26%)
Query: 306 MLAIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLY 352
++A+K L K FL E+K + LK+PN+ + PL + +YM NG L
Sbjct: 46 LVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLN 105
Query: 353 SLL----------HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
L H+N ++ + L + + A G+ +L +H+++++ LV
Sbjct: 106 QFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF---VHRDLATRNCLV 162
Query: 403 DEDFDARIMDFGFSR-LTNGDA------------------------SLQKDVHGFGVVLL 437
+ +I DFG SR L +GD + DV FGV L
Sbjct: 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLW 222
Query: 438 ELVT--GQKPFEINASEE 453
E+ T ++P+ + + E+
Sbjct: 223 EMFTLCKEQPYSLLSDEQ 240
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 50/199 (25%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGEKQFLL---EMKQVGLLKHPNL----------EK 339
G Y A+ LD G ++A+K + K EMK + LLKHPNL EK
Sbjct: 14 GKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREK 73
Query: 340 PLVY-KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
++ +Y S GTL LL LD L GL++LH +H++I +
Sbjct: 74 VYIFMEYCSGGTLEELLEHGRI--LDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPA 128
Query: 399 VILVDEDFDARIMDFGFS-RLTNGDASLQK-----------------------------D 428
I +D + ++ DFG + +L N ++ + D
Sbjct: 129 NIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAAD 188
Query: 429 VHGFGVVLLELVTGQKPFE 447
+ G V+LE+ TG++P+
Sbjct: 189 IWSLGCVVLEMATGKRPWS 207
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 45/195 (23%)
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411
+++ +S +T L L ARG+ +L +H+++++ ILV E++ A+I
Sbjct: 111 FAIANSTAST-LSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIA 166
Query: 412 DFGFSR----------------------LTNGDASLQKDVHGFGVVLLELVT-GQKPFEI 448
DFG SR L + DV +GV+L E+V+ G P+
Sbjct: 167 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 226
Query: 449 NASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW 508
E Y ++L R++ ++ DDE+ ++ +C +P E+
Sbjct: 227 MTCAELY--------EKLPQGYRLEKPLN-------CDDEVYDLMR---QCWREKPYERP 268
Query: 509 SMYQVYISLCSIAEQ 523
S Q+ +SL + E+
Sbjct: 269 SFAQILVSLNRMLEE 283
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 46/205 (22%), Positives = 75/205 (36%), Gaps = 67/205 (32%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEK-----QFLLEMKQVGLLKHPNL--------EK 339
G YKA G ++A+K++ EK + E+K + L+HPN+ K
Sbjct: 13 GQVYKARNKKTGELVALKKIR--MENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK 70
Query: 340 P-----LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAAR--------GLSWLHHCC 386
+V++YM + L LL S ++ + GL +LH
Sbjct: 71 GKGSIYMVFEYMDH-DLTGLLDSPE---------VKFTESQIKCYMKQLLEGLQYLHSN- 119
Query: 387 HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASL--------------------- 425
LH++I S IL++ D ++ DFG +R S
Sbjct: 120 --GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGAT 177
Query: 426 ----QKDVHGFGVVLLELVTGQKPF 446
+ D+ G +L EL G+ F
Sbjct: 178 RYGPEVDMWSVGCILAELFLGKPIF 202
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 59/204 (28%)
Query: 303 DGSMLAIKRL--SACKLGEKQFLLEMKQVGLLKHPNLEK---------PL--VYKYMSNG 349
D ++A+K L +A K F E + + +H N+ K P V++YM +G
Sbjct: 34 DKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHG 93
Query: 350 TLYSLLHSNGNTA------------LDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNI 395
L L S+G A L L+I + A G+ +L H +H+++
Sbjct: 94 DLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF-----VHRDL 148
Query: 396 SSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVH 430
++ LV D +I DFG SR + + + DV
Sbjct: 149 ATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 208
Query: 431 GFGVVLLELVT-GQKP-FEINASE 452
FGVVL E+ T G++P + ++ E
Sbjct: 209 SFGVVLWEIFTYGKQPWYGLSNEE 232
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 34/148 (22%)
Query: 306 MLAIK--RLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLY 352
++A+K R A K FL E+K + LK PN+ E PL + +YM NG L
Sbjct: 48 LVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLN 107
Query: 353 SLLHS--------NGNTA---------LDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
L S NGN A + + S L + L A G+ +L +H+++
Sbjct: 108 QFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF---VHRDL 164
Query: 396 SSSVILVDEDFDARIMDFGFSR-LTNGD 422
++ LV E+ +I DFG SR L GD
Sbjct: 165 ATRNCLVGENLTIKIADFGMSRNLYAGD 192
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 52/212 (24%)
Query: 287 VLVSTWTGTTYKAM---LLDGSML--AIKRL--SACKLGEKQFLLEMKQVGLLKHPNLEK 339
VL S GT YK + + + AIK L K+ L E + + HP++ +
Sbjct: 14 VLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR 73
Query: 340 ----------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCH 387
L+ + M G L + ++ + L + A+G+S+L
Sbjct: 74 LLGICLSSQVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRL-- 130
Query: 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASL---------------------- 425
+H+++++ +LV +I DFG ++L + D
Sbjct: 131 ---VHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRI 187
Query: 426 ---QKDVHGFGVVLLELVT-GQKPFE-INASE 452
+ DV +GV + EL+T G KP+E I A E
Sbjct: 188 YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE 219
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 55/183 (30%)
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAAR--------GLSWLHHCCHPPCLH 392
LV +Y+ G L SLL + G+ D AR L +LH +H
Sbjct: 70 LVMEYLPGGDLASLLENVGSLDEDV----------ARIYIAEIVLALEYLHSN---GIIH 116
Query: 393 QNISSSVILVDEDFDARIMDFGFS------RLTNGDASLQKDV----------------- 429
+++ IL+D + ++ DFG S R N + ++D
Sbjct: 117 RDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176
Query: 430 -HGF-------GVVLLELVTGQKPFEINASEEGYK---GNLVNWIDQLSSSGRIKDVIDK 478
H G +L E + G PF EE ++ + W + + S D+I K
Sbjct: 177 GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISK 236
Query: 479 ALT 481
L
Sbjct: 237 LLV 239
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 28/127 (22%)
Query: 345 YMSNGTLYSL---LHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401
Y G+L S+ + G + +I +GLS+LH +H++I S IL
Sbjct: 82 YCEGGSLDSIYKKVKKRGGRIGEKVL-GKIAESVLKGLSYLHS---RKIIHRDIKPSNIL 137
Query: 402 VDEDFDARIMDFGFS---------------------RLTNGDASLQKDVHGFGVVLLELV 440
+ ++ DFG S R+ S+ DV G+ LLE+
Sbjct: 138 LTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVA 197
Query: 441 TGQKPFE 447
+ PF
Sbjct: 198 QNRFPFP 204
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 56/182 (30%)
Query: 326 MKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSLLHSN------GNTALDWPSR 368
MK +G KH N+ E PL V +Y ++G L L + + P
Sbjct: 69 MKMIG--KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPE 126
Query: 369 LRIGLGA--------ARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR--- 417
+ ARG+ +L C+H+++++ +LV ED +I DFG +R
Sbjct: 127 ETLTQKDLVSFAYQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIH 183
Query: 418 -------LTNG---------DA------SLQKDVHGFGVVLLELVT-GQKPFEINASEEG 454
TNG +A + Q DV FGV+L E+ T G P+ EE
Sbjct: 184 HIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 243
Query: 455 YK 456
+K
Sbjct: 244 FK 245
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 4e-04
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 9 AEDDVKCLAGIKSF--NDPQGKLSSWSLTNSSVGFICRFNGVSCW 51
DD L KS DP G LSSW N S C + GV+C
Sbjct: 1 LNDDRDALLAFKSSLNGDPSGALSSW---NPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 54/195 (27%)
Query: 308 AIKRLSAC-KLGEK-QFLLE---MKQ------VGLLKHPNLEKP--LVYKYMSNGTLYSL 354
AIK ++ + E+ +FL E MK+ V LL + +P +V + M+ G L S
Sbjct: 40 AIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSY 99
Query: 355 LHS-----NGNTALDWPSRLRIGLGA---ARGLSWLH--HCCHPPCLHQNISSSVILVDE 404
L S N L P+ + A A G+++L H +++++ +V E
Sbjct: 100 LRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVH-----RDLAARNCMVAE 154
Query: 405 DFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVVLLEL 439
D +I DFG +R L +G + + DV FGVVL E+
Sbjct: 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214
Query: 440 VT-GQKPFEINASEE 453
T ++P++ ++EE
Sbjct: 215 ATLAEQPYQGLSNEE 229
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 46/194 (23%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGE------KQFLLEMKQVGLLKHPNL--------- 337
G+ Y+ + LD G A+K +S G+ KQ E+ + L+HPN+
Sbjct: 14 GSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE 73
Query: 338 EKPL-VY-KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
E L ++ + + G+L LL G + P GL +LH +H++I
Sbjct: 74 EDNLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHD---RNTVHRDI 128
Query: 396 SSSVILVDEDFDARIMDFGFSR--LTNGDAS--------------LQKDVHGF------- 432
+ ILVD + ++ DFG ++ + A Q+ +G
Sbjct: 129 KGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSL 188
Query: 433 GVVLLELVTGQKPF 446
G +LE+ TG+ P+
Sbjct: 189 GCTVLEMATGKPPW 202
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 8e-04
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 49/181 (27%)
Query: 304 GSMLAIKRLSACKLGEKQFLLEMKQ-VGLLK---HPNL-------EKP------LVYKYM 346
G +A+K L+ GE+Q + ++ + +L+ H N+ EKP L+ +Y+
Sbjct: 33 GEQVAVKSLNH--SGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYL 90
Query: 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF 406
+G+L L + + ++ L +G+ +L +H+++++ ILV+ +
Sbjct: 91 PSGSLRDYLQRHRDQ-INLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESED 146
Query: 407 DARIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELV 440
+I DFG +++ D S DV FGV L EL
Sbjct: 147 LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELF 206
Query: 441 T 441
T
Sbjct: 207 T 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 47/185 (25%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQ-----FLLEMKQVGLLKHPNLEK--------- 339
G +K L D + +A+K CK Q FL E + + HPN+ K
Sbjct: 9 GEVFKGTLKDKTPVAVK---TCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ 65
Query: 340 P--LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
P +V + + G S L + L ++ L AA G+++L C+H+++++
Sbjct: 66 PIYIVMELVPGGDFLSFLRKKKDE-LKTKQLVKFALDAAAGMAYLES---KNCIHRDLAA 121
Query: 398 SVILVDEDFDARIMDFGFSR------------------------LTNGDASLQKDVHGFG 433
LV E+ +I DFG SR L G S + DV +G
Sbjct: 122 RNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYG 181
Query: 434 VVLLE 438
++L E
Sbjct: 182 ILLWE 186
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 41/163 (25%)
Query: 321 QFLLEMKQVGLLKHPNL--------EKPLVYKYM---SNGTLYSLLHSNGNTALDWPSRL 369
+FL E + + HPN+ +K +Y M G + L + G L +
Sbjct: 39 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG-PRLKVKELI 97
Query: 370 RIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR------------ 417
++ AA G+ +L C+H+++++ LV E +I DFG SR
Sbjct: 98 QMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154
Query: 418 -------------LTNGDASLQKDVHGFGVVLLELVT-GQKPF 446
L G S + DV FG++L E + G P+
Sbjct: 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPY 197
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 42/178 (23%)
Query: 307 LAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSLL 355
+AIK ++ + E+ F+ E K + L HP L +KPL V ++M NG L + L
Sbjct: 31 VAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYL 90
Query: 356 HSN-GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414
G + D L + G+ +L +H+++++ LV ++ DFG
Sbjct: 91 RQRQGKLSKD--MLLSMCQDVCEGMEYLERNSF---IHRDLAARNCLVSSTGVVKVSDFG 145
Query: 415 FSRLTNGDA------------------------SLQKDVHGFGVVLLELVT-GQKPFE 447
+R D S + DV FGV++ E+ T G+ PFE
Sbjct: 146 MTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFE 203
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 35/159 (22%)
Query: 370 RIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS------------- 416
+I + +GL++LH +H+++ S ILV+ ++ DFG S
Sbjct: 104 KIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVG 161
Query: 417 --------RLTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468
R+ D S++ D+ G+ L+EL TG+ P+ + G + L
Sbjct: 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYP--PENDPPDGIF----ELLQ- 214
Query: 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEK 507
I + L + + F+ C+ P+E+
Sbjct: 215 --YIVNEPPPRLPSGKFSPDFQDFV---NLCLIKDPRER 248
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 26/88 (29%)
Query: 391 LHQNISSSVILVDEDFDARIMDFGFS-RLT-------------------------NGDAS 424
+H+++ S IL+D + ++ DFG S RL N
Sbjct: 137 IHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYD 196
Query: 425 LQKDVHGFGVVLLELVTGQKPFEINASE 452
++ DV G+ L+EL TGQ P++ +E
Sbjct: 197 IRADVWSLGISLVELATGQFPYKNCKTE 224
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 0.002
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNR 140
+L+ L+LS NN IP K P L LDLS N+L+ P L +L LS N
Sbjct: 1 NLKSLDLS-NNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 141 L 141
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 56/201 (27%)
Query: 294 GTTYKAMLL----DGSMLAIKRLSACKLGEKQFLLEMKQVGLL---KHPNLEKP------ 340
G+ KA+L+ DG IK ++ K+ K+ K+V +L KHPN+ +
Sbjct: 11 GSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE 70
Query: 341 -----LVYKYMSNGTLYSLLHSNGNTA------LDWPSRLRIGLGAARGLSWLHHCCHPP 389
+V Y G LY +++ LDW ++ + L H
Sbjct: 71 NGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLAL---------KHVHDRK 121
Query: 390 CLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK---------------------- 427
LH++I S I + +D ++ DFG +R+ N L +
Sbjct: 122 ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNK 181
Query: 428 -DVHGFGVVLLELVTGQKPFE 447
D+ G VL E+ T + FE
Sbjct: 182 SDIWALGCVLYEMCTLKHAFE 202
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 29/107 (27%)
Query: 376 ARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR----------LTNGDASL 425
ARG+ +L C+H+++++ +LV ED +I DFG +R TNG +
Sbjct: 150 ARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 206
Query: 426 ---------------QKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456
Q DV FGV+L E+ T G P+ EE +K
Sbjct: 207 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 253
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 49/155 (31%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQF---------LLEMKQVGLLKHPNL------ 337
YKA G ++AIK++ KLGE++ L E+K + LKHPN+
Sbjct: 14 AVVYKARDKETGRIVAIKKI---KLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDV 70
Query: 338 --EKP---LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAA----------RGLSWL 382
K LV+++M L ++ I L A RGL +L
Sbjct: 71 FGHKSNINLVFEFME-TDLEKVIKDK-----------SIVLTPADIKSYMLMTLRGLEYL 118
Query: 383 HHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417
H LH+++ + +L+ D ++ DFG +R
Sbjct: 119 HSNW---ILHRDLKPNNLLIASDGVLKLADFGLAR 150
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 62/209 (29%)
Query: 308 AIKRLSACKL--GEKQFLLEMKQVGLLKHPN--------LEKP--LVYKYMSNGTLYSLL 355
A+K L + G+K+FL E + L HP +P LV + G L L
Sbjct: 27 AVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGPLLKYL 86
Query: 356 HSNGNTA----LDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS-SVILVDEDFDARI 410
+ ++ A G+++L +H+++++ +V+LV+ A+I
Sbjct: 87 KKRREIPVSDLKELAHQV------AMGMAYLESK---HFVHRDLAARNVLLVNRHQ-AKI 136
Query: 411 MDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQ 443
DFG SR + S + DV +GV L E + G
Sbjct: 137 SDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGA 196
Query: 444 KPFEINASEEGYKGNLVNWIDQLSSSGRI 472
KP+ KG V I L S R+
Sbjct: 197 KPY------GEMKGAEV--IAMLESGERL 217
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.003
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 59/210 (28%)
Query: 287 VLVSTWTGTTYKAMLL-DGSML----AIKRLSACKLGEK---QFLLEMKQVGLLKHPNLE 338
VL S GT YK + + +G + AIK L+ G K +F+ E + + HP+L
Sbjct: 14 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLV 72
Query: 339 K----------PLVYKYMSNGTLYSLLHSNGNTA-----LDWPSRLRIGLGAARGLSWLH 383
+ LV + M +G L +H + + L+W ++ A+G+ +L
Sbjct: 73 RLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 126
Query: 384 HCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDA-------------------- 423
+H+++++ +LV +I DFG +RL GD
Sbjct: 127 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 183
Query: 424 -----SLQKDVHGFGVVLLELVT-GQKPFE 447
+ Q DV +GV + EL+T G KP++
Sbjct: 184 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 19/137 (13%)
Query: 304 GSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEK-----------PLVYKYMSNG 349
G +A+K+++ +L Q L E+K + +HP + K LV +YM
Sbjct: 25 GETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMP-S 83
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409
L +L ++ L + + +H+++ + +L+ D +
Sbjct: 84 DLSEVLRDEERP----LPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLK 139
Query: 410 IMDFGFSRLTNGDASLQ 426
I DFG +RL + +
Sbjct: 140 IADFGLARLFSEEEPRL 156
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 25/127 (19%)
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
++M G+L + G ++ + I + GL++L++ +H++I S ILV+
Sbjct: 83 EFMDCGSLDRIYKKGGPIPVEILGK--IAVAVVEGLTYLYNVHR--IMHRDIKPSNILVN 138
Query: 404 EDFDARIMDFGFS---------------------RLTNGDASLQKDVHGFGVVLLELVTG 442
++ DFG S R+ G +++ DV G+ ++EL G
Sbjct: 139 SRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALG 198
Query: 443 QKPFEIN 449
+ PF +
Sbjct: 199 KFPFAFS 205
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 29/107 (27%)
Query: 376 ARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR----------LTNGDASL 425
ARG+ +L C+H+++++ +LV ED +I DFG +R TNG +
Sbjct: 144 ARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPV 200
Query: 426 ---------------QKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456
Q DV FGV+L E+ T G P+ EE +K
Sbjct: 201 KWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 247
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 303 DGSMLAIKRLSACKLGEKQ-FLLEMKQVGLLKHPNLEK---------PL--VYKYMSNGT 350
D ++A+K L +Q F E + + +L+H ++ + PL V++YM +G
Sbjct: 34 DKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGD 93
Query: 351 LYSLLHSNGNTA-------------LDWPSRLRIGLGAARG---LSWLHHCCHPPCLHQN 394
L L S+G A L L I A G L+ LH +H++
Sbjct: 94 LNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF------VHRD 147
Query: 395 ISSSVILVDEDFDARIMDFGFSR--------LTNGDASL-----------------QKDV 429
+++ LV + +I DFG SR G L + D+
Sbjct: 148 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDI 207
Query: 430 HGFGVVLLELVT-GQKPF 446
FGVVL E+ T G++P+
Sbjct: 208 WSFGVVLWEIFTYGKQPW 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.98 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.98 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.98 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.98 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.98 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.98 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.98 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.98 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.98 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.98 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.98 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.98 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.98 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.98 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.98 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.98 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.98 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.98 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.98 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.98 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.98 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.98 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.98 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.97 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.97 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.97 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.97 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.97 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.97 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.97 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.97 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.97 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.97 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.97 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.97 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.97 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.97 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.97 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.97 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.97 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.97 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.97 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.97 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.97 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.97 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.97 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.97 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.97 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.96 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.96 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.96 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.96 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.96 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.96 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.96 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.96 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.95 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.95 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.95 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.95 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.95 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.94 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.94 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.94 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.94 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.94 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.94 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.93 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.93 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.92 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.91 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.91 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.91 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.89 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.89 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.88 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.87 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.86 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.85 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.85 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.85 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.85 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.84 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.84 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.83 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.83 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.82 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.82 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.81 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.81 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.8 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.77 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.75 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.74 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.73 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.72 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.71 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.7 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.7 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.69 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.69 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.67 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.65 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.62 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.6 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.57 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.56 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.54 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.52 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.49 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.48 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.44 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.43 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.31 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.28 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.27 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.18 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.17 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.17 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.16 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.14 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.12 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.08 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.06 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.01 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.01 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.97 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 98.94 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.91 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.91 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.89 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.88 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.86 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.84 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.82 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.81 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.79 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.77 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.77 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.73 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.72 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.71 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.64 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.64 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.64 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.63 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.59 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.57 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.57 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.56 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.55 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.54 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.54 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.49 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.46 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.45 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.45 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.43 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.41 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.39 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.34 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.3 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.28 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.27 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.19 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.12 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.11 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.04 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.02 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.01 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.01 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 98.0 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.98 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 97.96 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 97.94 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-55 Score=507.04 Aligned_cols=441 Identities=29% Similarity=0.467 Sum_probs=329.8
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+++|.+|..+.++++|+.|+|++|+++|.+|..+.. +++|++|+|++|.++|.+|..+..+++|+.|+
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSS-CKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcC-ccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 46889999999999999999999999999999999999999999887 99999999999999999999999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcc--ccccccccccccccCCCCCCC---CCCCCCCcc-hhHHHHh
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF--FNGAMKMDMLADSRLGGANLG---SKCCDLSKK-KLAAIIA 209 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~~~~l~~~~~~---~~c~~~~~~-~~~~ii~ 209 (538)
|++|+++|.+|..+.++++|+.|++++|+++|.+|.. +..+....+.+|+.+||.... .+|...... ....+++
T Consensus 554 Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~ 633 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYIT 633 (968)
T ss_pred CCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehh
Confidence 9999999999999999999999999999999999954 455666778899999985432 234321111 1111222
Q ss_pred hhhhhhhhHHHHHHHHHHhhccccccccccCCcccCchhhhhcccccceeeeeccc-cccccCHHHHHHHhcCCCCCCeE
Q 040267 210 AGAFGAAPSLMLVFGLWLWNNLTRVSKRRKRGYEFDDCWVERLGVHKLVEVSLFLK-PLIKLKLVHLIAATSNFSAQNVL 288 (538)
Q Consensus 210 ~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~f~~~~~i 288 (538)
+ ++++++++++++++++++ ++|+..+.++.......| ....+.. ....++++++. ..|...++|
T Consensus 634 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~i 698 (968)
T PLN00113 634 C-TLGAFLVLALVAFGFVFI-RGRNNLELKRVENEDGTW----------ELQFFDSKVSKSITINDIL---SSLKEENVI 698 (968)
T ss_pred H-HHHHHHHHHHHHHHHHHH-Hhhhcccccccccccccc----------cccccccccchhhhHHHHH---hhCCcccEE
Confidence 2 222222222222222222 121111111111101111 1111111 11234445544 457788999
Q ss_pred eecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHHHHhh
Q 040267 289 VSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLH 356 (538)
Q Consensus 289 g~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~~~l~ 356 (538)
|+|+||.||+|+. .++..||||+++..... ...|++.+++++|||| ..++||||+++|+|.++++
T Consensus 699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 775 (968)
T PLN00113 699 SRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR 775 (968)
T ss_pred ccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh
Confidence 9999999999995 57899999998753322 2356889999999999 3469999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc-----------------
Q 040267 357 SNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT----------------- 419 (538)
Q Consensus 357 ~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~----------------- 419 (538)
. ++|.++.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+...
T Consensus 776 ~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~ 849 (968)
T PLN00113 776 N-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPET 849 (968)
T ss_pred c-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCccc
Confidence 3 8999999999999999999997666899999999999999999888875 5543321
Q ss_pred --CCCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC--CCcHHHHHHHHHH
Q 040267 420 --NGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG--KGYDDEILQFLQI 495 (538)
Q Consensus 420 --~~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~l 495 (538)
...++.++|||||||++|||+||+.||+... .....+.+|++...........+|+.+.. ....+++.++.++
T Consensus 850 ~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 926 (968)
T PLN00113 850 RETKDITEKSDIYGFGLILIELLTGKSPADAEF---GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNL 926 (968)
T ss_pred ccCCCCCcccchhhHHHHHHHHHhCCCCCCccc---CCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHH
Confidence 1127889999999999999999999996422 22346788887766655666677776644 2345677788999
Q ss_pred HhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 496 ACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 496 ~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
+.+||+.||++||||+||+++|+++.+..
T Consensus 927 ~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 927 ALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 99999999999999999999999987643
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=417.25 Aligned_cols=256 Identities=42% Similarity=0.697 Sum_probs=228.2
Q ss_pred cccccCHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccccc-HHHHHHHHHHHhcCCCCCC-------
Q 040267 266 PLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG-EKQFLLEMKQVGLLKHPNL------- 337 (538)
Q Consensus 266 ~~~~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~H~ni------- 337 (538)
+...|+++++..||++|+..+.||+|+||.||+|.+.+|..||||++...... ..+|.+|+.++.+++|||+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999998765544 6679999999999999999
Q ss_pred ----c-ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 338 ----E-KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 338 ----~-~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
. ++||||||++|+|.++|+......++|.+|++||.++|+||+|||+.+.++||||||||+|||||+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 2 68999999999999999986533789999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCC---------C---------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 413 FGFSRLTNG---------D---------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 413 fg~a~~~~~---------~---------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
||+|+.... . .+.|+|||||||+|+|++||+.|.+.... .....++.|+.....
T Consensus 221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~--~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP--RGELSLVEWAKPLLE 298 (361)
T ss_pred ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC--cccccHHHHHHHHHH
Confidence 999986643 1 67899999999999999999998875432 123359999999999
Q ss_pred cCCcccccccccc-CCCcH-HHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 469 SGRIKDVIDKALT-GKGYD-DEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 469 ~~~~~~~~d~~l~-~~~~~-~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.+++.+++|+.+. +++.. +++.++.++|.+|++.+|.+||+|.||+++|+.+...
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 9999999999987 55554 6899999999999999999999999999999665543
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=336.92 Aligned_cols=222 Identities=32% Similarity=0.416 Sum_probs=177.9
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCC----------c--ccEEEeecCCC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNL----------E--KPLVYKYMSNG 349 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni----------~--~~lv~e~~~~g 349 (538)
.+.+|+|+||+||+|.+.....||||++...... .++|.+|+.+|.+++|||| . .++|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 3459999999999999955555999999764322 4589999999999999999 2 46999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-ccccCCCCCCeeeCCCC-CeEEEeccCCcccCC------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP-CLHQNISSSVILVDEDF-DARIMDFGFSRLTNG------ 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~------ 421 (538)
+|.++++......+++..+++|+.|||+||.|||+ .+ ||||||||+|||++.++ ++||+|||+++....
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~ 202 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMT 202 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccccccc
Confidence 99999988533579999999999999999999999 66 99999999999999997 999999999974321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.|+|||||||++|||+||+.||...... .-+..... ...+.
T Consensus 203 ~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~--------~~~~~v~~---------~~~Rp 265 (362)
T KOG0192|consen 203 SVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV--------QVASAVVV---------GGLRP 265 (362)
T ss_pred CCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHh---------cCCCC
Confidence 2889999999999999999999999864321 11111111 11122
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
..+......+..++.+||+.||++||++.||+..|+.+......
T Consensus 266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 22222344455555599999999999999999999998876543
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=337.31 Aligned_cols=218 Identities=25% Similarity=0.370 Sum_probs=184.7
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeecCCCCHHHH
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYMSNGTLYSL 354 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~~~gsL~~~ 354 (538)
+.||+|.||.||.|.++....||+|.++......+.|.+|+++|++++|+||+ .|||||||+.|+|.++
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~y 291 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDY 291 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHH
Confidence 56999999999999998888999999998777788999999999999999992 4799999999999999
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC------------
Q 040267 355 LHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------------ 422 (538)
Q Consensus 355 l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------------ 422 (538)
|+...+..+...+.+.++.|||+|++||++ +++|||||..+|||++++..+||+|||+|+...++
T Consensus 292 Lr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPI 368 (468)
T KOG0197|consen 292 LRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPI 368 (468)
T ss_pred hhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCc
Confidence 998666689999999999999999999999 99999999999999999999999999999965543
Q ss_pred ------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHH
Q 040267 423 ------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEI 489 (538)
Q Consensus 423 ------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 489 (538)
++.|||||||||+||||+| |+.||..... .+.+ ..+.+| .+-..+..++
T Consensus 369 kWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--------~ev~-~~le~G---------yRlp~P~~CP 430 (468)
T KOG0197|consen 369 KWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--------EEVL-ELLERG---------YRLPRPEGCP 430 (468)
T ss_pred eecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--------HHHH-HHHhcc---------CcCCCCCCCC
Confidence 8899999999999999999 9999985332 1112 222222 2222233355
Q ss_pred HHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 490 LQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 490 ~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+.+|+..||..+|++|||++.+...|+++....
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 55666777999999999999999999999887543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=312.03 Aligned_cols=224 Identities=26% Similarity=0.370 Sum_probs=179.6
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccc--ccccHHHHHHHHHHHhcCCCCCCc--------
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSA--CKLGEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
++++|++. .+.||+|..|+|||+.++ +++.+|+|.+.. .....+++.+|++++++.+||+|+
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 45556654 467999999999999965 688999999953 334467899999999999999992
Q ss_pred ----ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 339 ----KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 339 ----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..++||||.+|||++++...+ .+++...-+|+.+|++||.|||+ ..+||||||||+|||++..|++||+|||
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFG 224 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFG 224 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEecccc
Confidence 459999999999999998765 69999999999999999999995 2899999999999999999999999999
Q ss_pred CCcccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 415 FSRLTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 415 ~a~~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.++.+.. .|+.++||||||++++|+++|+.||..... ......+.+......
T Consensus 225 VS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~---~~~~~~~Ll~~Iv~~---- 297 (364)
T KOG0581|consen 225 VSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP---PYLDIFELLCAIVDE---- 297 (364)
T ss_pred ccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC---CCCCHHHHHHHHhcC----
Confidence 9985432 289999999999999999999999986411 111222222222211
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..|.+.....+++++.|+. .|+++||.+|||+.|+++.
T Consensus 298 --ppP~lP~~~fS~ef~~FV~---~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 298 --PPPRLPEGEFSPEFRSFVS---CCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred --CCCCCCcccCCHHHHHHHH---HHhcCCcccCCCHHHHhcC
Confidence 1133333345667888888 9999999999999999864
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=318.40 Aligned_cols=213 Identities=22% Similarity=0.338 Sum_probs=179.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccc----ccccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSA----CKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
..|...++||+|+|+.||.++. .+|..||+|++.+ .....+...+||++.+.++|||| ..|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688999999999999999995 8899999999976 34556789999999999999999 447999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|+|++|+|..+++.+. .+++.++..+++||+.||.|||+ .+|+|||||..|+||++++++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 9999999999999554 79999999999999999999999 99999999999999999999999999999876522
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+..+||||+||++|-|++|++||+...-.+ -....... + ..
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke--------ty~~Ik~~-~------Y~- 236 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE--------TYNKIKLN-E------YS- 236 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH--------HHHHHHhc-C------cc-
Confidence 6788999999999999999999998643222 12221111 1 11
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+...+.++.+++. ++|++||.+|||+++|+..
T Consensus 237 ~P~~ls~~A~dLI~---~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 237 MPSHLSAEAKDLIR---KLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccccCHHHHHHHH---HHhcCCcccCCCHHHHhcC
Confidence 12234567777777 9999999999999999863
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=307.41 Aligned_cols=218 Identities=22% Similarity=0.298 Sum_probs=171.1
Q ss_pred cCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc--------cHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL--------GEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
+.|...+.||+|+||.|-+|. ..+|+.||||++.+... ......+|+++|++++|||| ..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 346678899999999999998 66799999999975321 12335799999999999999 44
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFS 416 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a 416 (538)
||||||++||+|.+.+-.++ .+.+..-..++.|++.|+.|||+ .||+||||||+|||+..+ ..+||+|||+|
T Consensus 252 YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred EEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchh
Confidence 89999999999999998876 58888889999999999999999 999999999999999766 77999999999
Q ss_pred cccCCC-------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 417 RLTNGD-------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 417 ~~~~~~-------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
+..+.. +..++|+||+||+||-+++|.+||.+.... ..+.+.+ ..|+
T Consensus 327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~----~sl~eQI----~~G~ 398 (475)
T KOG0615|consen 327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD----PSLKEQI----LKGR 398 (475)
T ss_pred hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC----ccHHHHH----hcCc
Confidence 977532 445899999999999999999999853221 1122222 2222
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.. -+ +.....+++...+++ ++|..||++|||+.|+++.
T Consensus 399 y~f--~p-~~w~~Iseea~dlI~---~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 399 YAF--GP-LQWDRISEEALDLIN---WMLVVDPENRPSADEALNH 437 (475)
T ss_pred ccc--cC-hhhhhhhHHHHHHHH---HhhEeCcccCcCHHHHhcC
Confidence 211 00 011123445555555 9999999999999999874
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=294.87 Aligned_cols=222 Identities=19% Similarity=0.345 Sum_probs=175.6
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccc---cccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
+|.+.++||+|.||.||++. +.+|..||.|.++-. ...++....|+.+|++++|||| +.+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46667889999999999998 779999999999743 3445678999999999999999 345999
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||..|+|.+.++.- .++.+++.++++++.|++.||..+|+...+ -|+||||||.||+|+.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 999999999999743 346799999999999999999999984433 28999999999999999999999999999765
Q ss_pred CC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 GD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.. |+.||||||+||++|||..-+.||.+.+ +.. +...+..++..
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~-L~~KI~qgd~~---- 246 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--------LLS-LCKKIEQGDYP---- 246 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--------HHH-HHHHHHcCCCC----
Confidence 43 8999999999999999999999998632 222 12223333322
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.+.++..+..+..++. .|+..||+.||+...++..+..
T Consensus 247 -~~p~~~YS~~l~~li~---~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 247 -PLPDEHYSTDLRELIN---MCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -CCcHHHhhhHHHHHHH---HHccCCcccCCCcchHHHHHHH
Confidence 1222334445554444 9999999999986555554443
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=331.46 Aligned_cols=220 Identities=23% Similarity=0.360 Sum_probs=187.9
Q ss_pred CCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEe
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e 344 (538)
..++++||.|.||.||+|+++- ...||||.++... ..+.+|+.|+.+|.++.||||. .+||.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 3567899999999999999643 3579999998644 3356799999999999999993 369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
||++|+|+.||+.+.+ .+++.+...+.++||.|+.||-+ .++|||||-.+|||++.+..+|++|||+++.+.++
T Consensus 711 yMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 9999999999998875 59999999999999999999999 99999999999999999999999999999977542
Q ss_pred ------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
+|.++||||||||+||.++ |.+||.+...++ +.+.++
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd------------------VIkaIe 848 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD------------------VIKAIE 848 (996)
T ss_pred ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH------------------HHHHHH
Confidence 7889999999999999988 999998644321 222233
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...+-..+.+++..+.+|++.||++|-.+||++.+|+..|.++...
T Consensus 849 ~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 849 QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 3334445667888899999999999999999999999999998654
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=299.07 Aligned_cols=168 Identities=26% Similarity=0.385 Sum_probs=149.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
..+|...+.||+|+||+||+|++. ++..||||.+.+.. ...+-+..|+++|++++|||| ..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457888888999999999999954 58999999997643 334567899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC------CCeEEEeccCCc
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED------FDARIMDFGFSR 417 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a~ 417 (538)
|||.+|+|.+|++..+ .+++.....++.|+|.||++||+ ++||||||||.||||+.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999999887 69999999999999999999999 999999999999999864 458999999999
Q ss_pred ccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 418 LTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 418 ~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
.+... |+.|+|+||.|+++||+++|+.||+....
T Consensus 164 ~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 164 FLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 77643 89999999999999999999999986443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=287.03 Aligned_cols=231 Identities=21% Similarity=0.287 Sum_probs=171.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
+.|+...++|+|+||+|||++. ++|+.||||++..+..+ .+-..+|+++|++++|+|+ ..+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 3566778899999999999995 46999999999754432 3457899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
||+. ++-+-+.... ..++.....+++.|++.|+.|+|+ .++|||||||+|||++.++.+||+|||+|+.+...
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 9987 4444454433 248899999999999999999999 99999999999999999999999999999976521
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccc------cH-HHHHHHHhccCCcc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG------NL-VNWIDQLSSSGRIK 473 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~ 473 (538)
|+..+||||+||++.||++|.+-|.+.++.+.... .+ .+...-+..++.+.
T Consensus 157 ~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~ 236 (396)
T KOG0593|consen 157 NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFH 236 (396)
T ss_pred hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence 88999999999999999999999987655432210 00 11111111111111
Q ss_pred cccccccc-----CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALT-----GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.=|... ....+....-+++++..|++.||++|++.++++.
T Consensus 237 Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 237 GVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111 1111222234667777999999999999999885
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=311.01 Aligned_cols=230 Identities=22% Similarity=0.329 Sum_probs=179.0
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc----------cc
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE----------KP 340 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~----------~~ 340 (538)
+.....+.+...+.||+|+||+||+|++.. .||||.+..... ..+.|++|+.++++-||.||. ..
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~A 463 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLA 463 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCcee
Confidence 333344445567889999999999999743 599999975432 346799999999999999993 35
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
||+.+|+|-+|+.+++... ..|+..+.+.|++|||+|+.|||. ++|||||||..||++.+++++||+|||++..-.
T Consensus 464 IiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred eeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 8999999999999999765 469999999999999999999999 999999999999999999999999999987321
Q ss_pred C----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 421 G----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 421 ~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
. .+++.+||||||+|+|||+||..||.....+... | ++-.|.
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi------f---mVGrG~- 609 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII------F---MVGRGY- 609 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE------E---Eecccc-
Confidence 0 1899999999999999999999999853332211 0 011111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
-..|.... ...+.+.+.+|...||..++++||.+.+|+..|+++..+
T Consensus 610 -l~pd~s~~---~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 610 -LMPDLSKI---RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred -cCccchhh---hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 11111111 122333444455599999999999999999999988775
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=326.98 Aligned_cols=223 Identities=23% Similarity=0.367 Sum_probs=184.8
Q ss_pred CCCCCCeEeecCCceEEEEEeCC------CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCCcc-----------cE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNLEK-----------PL 341 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni~~-----------~l 341 (538)
+....+.||+|.||.||+|...+ ...||||.++.... ..++|++|++++..++||||++ ++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 34455779999999999998432 45899999986543 4678999999999999999943 59
Q ss_pred EEeecCCCCHHHHhhcCCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 342 VYKYMSNGTLYSLLHSNGN------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
|+|||..|||.+||....+ ..++..+.+.||.|||.|++||-+ ..+|||||-.+|.|+.++..+|
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEE
Confidence 9999999999999976431 238889999999999999999999 9999999999999999999999
Q ss_pred EEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHH
Q 040267 410 IMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 410 l~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 463 (538)
|+|||+++.+.. .+|.+||||||||+|||+++ |+.||.+...++ |
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E---------V 714 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE---------V 714 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH---------H
Confidence 999999984432 28999999999999999999 999998755432 3
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
...++.+++. +.+..++..+..|++.||+.+|.+||+++||-..|+...+..
T Consensus 715 Ie~i~~g~lL---------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 715 IECIRAGQLL---------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHHcCCcc---------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 3444444432 234456677888888999999999999999999999876543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=309.73 Aligned_cols=225 Identities=22% Similarity=0.322 Sum_probs=173.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCCc-----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNLE----------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni~----------- 338 (538)
.++|...+.||+|+||.||+|.. .++..||+|.++... ...+.+.+|+.++.++ +||||+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 35688889999999999999973 235689999997533 2235688999999999 899992
Q ss_pred -ccEEEeecCCCCHHHHhhcCC----------------------------------------------------------
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNG---------------------------------------------------------- 359 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 359 (538)
.++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 358999999999999997532
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----------------
Q 040267 360 --NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----------------- 420 (538)
Q Consensus 360 --~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----------------- 420 (538)
...+++.++.+++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 1247888999999999999999999 999999999999999999999999999986431
Q ss_pred --------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHH
Q 040267 421 --------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQ 491 (538)
Q Consensus 421 --------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 491 (538)
..++.++|||||||++|||++ |..||......+ ... .....+... .. ....+. .
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-------~~~-~~~~~~~~~-----~~-~~~~~~---~ 305 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-------EFC-QRLKDGTRM-----RA-PENATP---E 305 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-------HHH-HHHhcCCCC-----CC-CCCCCH---H
Confidence 116789999999999999997 999997532211 111 111111110 01 111223 3
Q ss_pred HHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 492 FLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 492 l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+.+++.+||+.||++|||+.||++.|+++.++
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 45566699999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=303.23 Aligned_cols=224 Identities=24% Similarity=0.307 Sum_probs=171.2
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
.|+..+.||+|.||.||+|+ ..+|+.||+|+++.+. ....-..+||.+|+++.|||| ..|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 45556789999999999999 6789999999997543 334567899999999999999 347999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|||+. +|.-++...+ -.|+..++..++.|++.||+|+|. ++|+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 198 eYMdh-DL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred ecccc-hhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 99987 8988887643 469999999999999999999999 99999999999999999999999999999966542
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccccccc--------HHHHHHHHhccC
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGN--------LVNWIDQLSSSG 470 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~ 470 (538)
|+.+.|+||.||||.||++|++.|.+..+.+..... ...|-...+.
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP-- 350 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP-- 350 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC--
Confidence 899999999999999999999999876543321110 0111100000
Q ss_pred Cccccccc------cccC--CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 471 RIKDVIDK------ALTG--KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 471 ~~~~~~d~------~l~~--~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.+ .+.. ...+... ++|+-.+|..||++|.|+.++++
T Consensus 351 -~~~~~kp~~~y~r~l~E~~~~~~~~~---l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 -HATIFKPQQPYKRRLRETFKDFPASA---LDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred -cccccCCCCcccchHHHHhccCCHHH---HHHHHHHhccCccccccHHHHhc
Confidence 0001111 0100 1122333 44444999999999999998875
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=296.13 Aligned_cols=219 Identities=23% Similarity=0.371 Sum_probs=176.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc-cHHHHHHHHHHHhcCCCCCCc-------------ccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL-GEKQFLLEMKQVGLLKHPNLE-------------KPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~ni~-------------~~lv~e 344 (538)
.++...+.||+|.||.||.+... +|...|||.+..... ..+.+.+|+.+|.+++||||+ .++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45677789999999999999954 599999999875421 145689999999999999992 458999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcccCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~-- 421 (538)
|+++|+|.+++...++ .+++..+.++.+||++||+|||+ ++||||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999998876 79999999999999999999999 99999999999999999 79999999999885541
Q ss_pred C-------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 D-------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ~-------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
. ...++||||+||+++||+||+.||... .....++.........
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~~~~~~~ig~~~~~---- 241 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEEAEALLLIGREDSL---- 241 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cchHHHHHHHhccCCC----
Confidence 0 123899999999999999999999852 1122222222222211
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
|.+ .+..++++++|+. +|++.||++||||.|+++..-
T Consensus 242 -P~i-p~~ls~~a~~Fl~---~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 242 -PEI-PDSLSDEAKDFLR---KCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred -CCC-CcccCHHHHHHHH---HHhhcCcccCcCHHHHhhChh
Confidence 111 2234567888888 999999999999999998654
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=301.78 Aligned_cols=232 Identities=20% Similarity=0.264 Sum_probs=177.2
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHH--HHHHHHHHhcCC-CCCC------------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQ--FLLEMKQVGLLK-HPNL------------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~--~~~E~~~l~~l~-H~ni------------~~~lv 342 (538)
.++|...+.||.|.||.||+|+ ..+|..||||++++.-...++ -.+|++.|+++. |||| ..++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 3456777889999999999999 667999999999865544444 468999999998 9999 45799
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
||||+. +|+++++.+ ++.+++.++..|+.||++||+|+|. .|+.|||+||+|||+..+..+||+|||+|+.+...
T Consensus 89 fE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred HHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccccC
Confidence 999976 999999988 5689999999999999999999999 99999999999999998999999999999976542
Q ss_pred -----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccc--------cHHHHHHHHhcc--
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG--------NLVNWIDQLSSS-- 469 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~--------~~~~~~~~~~~~-- 469 (538)
|+.+.|+||+|||++|+.+-++-|.+.++.+.... ....|.......
T Consensus 164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 89999999999999999999999987655332111 001111100000
Q ss_pred --CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 470 --GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 470 --~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
=.+..+....+.. -.+....+.++++.+|++.||++|||+.|+++.
T Consensus 244 mnf~~P~~~~~~l~~-L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKD-LLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hccCCCcCCCCChHH-hCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0011111111100 011133445566669999999999999999875
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=289.46 Aligned_cols=207 Identities=21% Similarity=0.310 Sum_probs=172.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|+..++||+|+||.||.++. ++++.+|+|.+++.. ...+....|..+|.+++||.| ..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 45789999999999999999994 568999999998643 234668899999999999999 45799
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+.||.|..+|++.+ .+++..+.-++.+|+.||.|||+ .+||||||||+|||||++|.++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 99999999999999776 69999999999999999999999 9999999999999999999999999999984321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++..+|.||+|+++|||++|.+||...+ ...+........ -.
T Consensus 179 ~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~--------~~~~~~~I~~~k-------~~ 243 (357)
T KOG0598|consen 179 GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED--------VKKMYDKILKGK-------LP 243 (357)
T ss_pred CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc--------HHHHHHHHhcCc-------CC
Confidence 18899999999999999999999998533 333443333221 01
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKW 508 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP 508 (538)
..+...+.+++++++ ..+..||++|-
T Consensus 244 ~~p~~ls~~ardll~---~LL~rdp~~RL 269 (357)
T KOG0598|consen 244 LPPGYLSEEARDLLK---KLLKRDPRQRL 269 (357)
T ss_pred CCCccCCHHHHHHHH---HHhccCHHHhc
Confidence 122345678888888 99999999995
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=291.85 Aligned_cols=225 Identities=20% Similarity=0.316 Sum_probs=176.2
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...++||.|..++||+|+ .+.+..||||++...+ ...+.+.+|+..++.++|||| ..|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3468888999999999999999 6778999999997433 335789999999999999999 4469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
||.+||+.++++..-+..+++..+..|.+++++||.|||+ +|.||||||+.|||||.+|.+||+|||.+..+..
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999999987665569999999999999999999999 9999999999999999999999999987653211
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
+|+.|+||||||++..|+.+|..||........ .... + .+.....
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-------Ll~t-L-qn~pp~~ 252 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-------LLLT-L-QNDPPTL 252 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-------HHHH-h-cCCCCCc
Confidence 189999999999999999999999986443211 1111 1 1111111
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+..+.....-..+.+++..|++.||.+|||++++++
T Consensus 253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1111111111122234556666999999999999999986
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=293.88 Aligned_cols=226 Identities=18% Similarity=0.313 Sum_probs=175.1
Q ss_pred ccCHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccccc----HHHHHHHHHHHhcCCCCCCc------
Q 040267 269 KLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNLE------ 338 (538)
Q Consensus 269 ~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~ni~------ 338 (538)
.++.+++ +......||+|+++.||+|.. +|+.||||.++..... .+.+.+|+.++.+++||||+
T Consensus 14 ~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 14 CIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred ecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 4555565 233346899999999999998 7889999999764332 35677999999999999992
Q ss_pred ---------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 339 ---------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 339 ---------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
.++||||+++|+|.+++.... .+++..+.+++.+++.||+|||+. .+++||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~k 163 (283)
T PHA02988 88 IDIVDDLPRLSLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLK 163 (283)
T ss_pred EecccCCCceEEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEE
Confidence 248999999999999998754 689999999999999999999971 3788999999999999999999
Q ss_pred EEeccCCcccC----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 410 IMDFGFSRLTN----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 410 l~Dfg~a~~~~----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
|+|||+++... ..++.++|||||||++|||++|+.||...... .......
T Consensus 164 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--------~~~~~i~ 235 (283)
T PHA02988 164 IICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--------EIYDLII 235 (283)
T ss_pred EcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHH
Confidence 99999987421 12678999999999999999999999853221 1111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
..+. . ..+. ...+.++..+++ +||+.||++|||+.|+++.|+.+.
T Consensus 236 ~~~~-~----~~~~-~~~~~~l~~li~---~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 236 NKNN-S----LKLP-LDCPLEIKCIVE---ACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred hcCC-C----CCCC-CcCcHHHHHHHH---HHhcCCcccCcCHHHHHHHHHHHH
Confidence 1110 0 1111 112344555555 999999999999999999998764
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=297.65 Aligned_cols=217 Identities=22% Similarity=0.330 Sum_probs=174.6
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------c
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------E 338 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~ 338 (538)
.+..++|...+.||+|+|++||+|+ ..+++.+|||++.+.. ...+-...|-.+|.+| .||.| .
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 4455688999999999999999999 5679999999997532 1223466788889999 89999 4
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+|+||+++|+|.++|++.+ .|++.....++.+|+.||+|||+ .|||||||||+|||||+|+++||+|||.|+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeecccccc
Confidence 579999999999999999887 69999999999999999999999 9999999999999999999999999999997
Q ss_pred cCCC------------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHH
Q 040267 419 TNGD------------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 419 ~~~~------------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 462 (538)
+.+. .+..+|+|+|||++|+|+.|++||...++- .+-+-
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-----liFqk 298 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-----LIFQK 298 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-----HHHHH
Confidence 6532 677899999999999999999999864321 11111
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.. ++-.+... .++.++++++ +.+..||.+|+|..+|-+.
T Consensus 299 I~~----------l~y~fp~~-fp~~a~dLv~---KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 299 IQA----------LDYEFPEG-FPEDARDLIK---KLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHH----------hcccCCCC-CCHHHHHHHH---HHHccCccccccHHHHhhC
Confidence 110 11222222 2345666666 9999999999999777653
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=272.34 Aligned_cols=227 Identities=21% Similarity=0.298 Sum_probs=174.6
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
.|...+++|+|.||+||+|+ ..+|+.||||+++..... .....+||+.|+.++|+||. .-||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 56777899999999999999 667999999999864432 45688999999999999993 2399999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
|+. +|+..++... ..++..++..++.++++|++|+|+ +.|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 83 m~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 83 MPT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred ccc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 986 9999998765 378999999999999999999999 99999999999999999999999999999987642
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh--ccCCccc---cc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS--SSGRIKD---VI 476 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~ 476 (538)
|+...|+||.||++.||+-|.+-|.+.++.+... .-.+.+- ....+.+ +-
T Consensus 158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~----~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLS----KIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHH----HHHHHcCCCCcccCccccccc
Confidence 8889999999999999999987777654432211 1111000 0011111 11
Q ss_pred c--------ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 477 D--------KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 477 d--------~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
| +.......+....+.+++...++..||.+|+|+.|++++
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1 111111122233445666679999999999999999865
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=289.20 Aligned_cols=219 Identities=21% Similarity=0.389 Sum_probs=176.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|+..++||+|++|.||+|...++..||+|.+.......+.+.+|+.++++++|+|| ..+++|||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 4677889999999999999998888899999987655556789999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.++++......+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++.....
T Consensus 86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 999999987555578999999999999999999999 9999999999999999999999999999875431
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||+| |+.||...... ....++. .+. ..... .
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~----~~~-----~~~~~-~ 227 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-----DVMSALQ----RGY-----RMPRM-E 227 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-----HHHHHHH----cCC-----CCCCC-C
Confidence 15668999999999999998 99999753221 1111111 110 00000 1
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
..+.+ +.+++.+|++.+|++||+++++.+.|++
T Consensus 228 ~~~~~---~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 228 NCPDE---LYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCHH---HHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 12233 4455669999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=288.38 Aligned_cols=220 Identities=22% Similarity=0.385 Sum_probs=177.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.++|+..+.||+|++|.||+|...+++.||+|.++......+++.+|++++++++|+|+ ..+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 35688889999999999999998778899999998765566789999999999999999 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+++|.+++.......+++.++.+++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 9999999987554578999999999999999999999 9999999999999999999999999998864321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||+| |+.||...... .+.. . ..... . .
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~---~-~~~~~-~--------~ 223 (261)
T cd05068 162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVLQ---Q-VDQGY-R--------M 223 (261)
T ss_pred CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHH---H-HHcCC-C--------C
Confidence 15678999999999999999 99999753211 1111 1 11110 0 0
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.........+.+++.+|++.+|++||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0011122345566669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=266.19 Aligned_cols=225 Identities=20% Similarity=0.280 Sum_probs=178.3
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC----------------ccc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL----------------EKP 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni----------------~~~ 340 (538)
.++|.+.+.+|+|+|+.||.++ ..++..+|+|++.... .+.+..++|++..++++|||+ ..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 3468888999999999999999 7789999999997544 556778999999999999999 358
Q ss_pred EEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 341 LVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
++++|...|+|.+.+.... +..+++.+.++|+.+|.+||.+||+ ..++++||||||.|||+.+.+.+++.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 9999999999999997643 4579999999999999999999998 224599999999999999999999999999874
Q ss_pred cCC-----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 419 TNG-----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 419 ~~~-----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
..- ..++++|||||||+||+|+.|..||+.....
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~----------- 247 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ----------- 247 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-----------
Confidence 321 1789999999999999999999999842221
Q ss_pred HHHhccCCcc-ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 464 DQLSSSGRIK-DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 464 ~~~~~~~~~~-~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.+.+. .+..+.+.-...+.....+.+++.+|++.||.+||++.+++..++.+
T Consensus 248 -----GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 -----GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11111 11111111111111233344455599999999999999999998865
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=295.04 Aligned_cols=213 Identities=23% Similarity=0.372 Sum_probs=176.3
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccH-HHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGE-KQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.|..-.+||+|..|.||.|. ..+++.||||++....+.. +-+.+|+.+|+..+|+|| ..++|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 45666789999999999998 6678999999998765544 447899999999999999 4568999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-----
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD----- 422 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----- 422 (538)
+|+|.+.+.... +++.++..|++++++||+|||. ++|+|||||..|||++.++.+||+|||++..+...
T Consensus 354 ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 354 GGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred CCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 999999998764 9999999999999999999999 99999999999999999999999999999866542
Q ss_pred ------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc-CC
Q 040267 423 ------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT-GK 483 (538)
Q Consensus 423 ------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~ 483 (538)
|++|+||||||++++||+-|++||-....- .-++.....+. +.++ .+
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl--------rAlyLIa~ng~------P~lk~~~ 493 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATNGT------PKLKNPE 493 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH--------HHHHHHhhcCC------CCcCCcc
Confidence 899999999999999999999999853221 11111111221 2222 12
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+.++++|++ +||+.|+++||++.|+|+.
T Consensus 494 klS~~~kdFL~---~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 494 KLSPELKDFLD---RCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ccCHHHHHHHH---HHhhcchhcCCCHHHHhcC
Confidence 34568888888 9999999999999999974
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=301.37 Aligned_cols=234 Identities=21% Similarity=0.335 Sum_probs=195.9
Q ss_pred HHHHHHhcCCCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 273 VHLIAATSNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 273 ~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++.+....+....++||.|.||.||.|.|+. ...||||.++.+....++|+.|..+|+.++|||+ ..|
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 4444444556667899999999999999876 6689999999888888999999999999999999 457
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
||+|||.+|+|.+||++..+..++--..+.++.||+.|++||.. +.+|||||-.+|.|+.++..+||+|||+++++.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 99999999999999998877778888889999999999999999 999999999999999999999999999999876
Q ss_pred CC------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 421 GD------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 421 ~~------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
++ ++.|+|||+|||+||||.| |..||.+-. ...|..++.
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid---------lSqVY~LLE------- 480 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID---------LSQVYGLLE------- 480 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc---------HHHHHHHHh-------
Confidence 54 6789999999999999999 999998521 122333332
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
+..+-+.+..+..++.+|+..||+.+|++||++.|+-+.++.+..+..++
T Consensus 481 --kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 481 --KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred --ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 22333344556677888888999999999999999999998765544333
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=286.37 Aligned_cols=219 Identities=22% Similarity=0.369 Sum_probs=174.8
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
+|...+.||+|++|.||+|... +++.||+|.++.......++.+|++++++++|+|| ..+++|||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 86 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCC
Confidence 4677789999999999999954 58899999998665556789999999999999999 34589999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.......+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++.....
T Consensus 87 ~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 87 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 999999987655568999999999999999999999 9999999999999999999999999998875321
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++ |..||...... +...... .+ . .... ..
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~-~~-~----~~~~-~~ 228 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLE-KG-Y----RMER-PE 228 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHH-CC-C----CCCC-CC
Confidence 15678999999999999998 99998753221 1111111 11 0 0011 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
..+.+ +.+++.+||+.+|++|||+.++++.|+.+
T Consensus 229 ~~~~~---~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 229 GCPPK---VYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCHH---HHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 12334 44455599999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=293.83 Aligned_cols=223 Identities=22% Similarity=0.363 Sum_probs=174.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCC----EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGS----MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
.+|+..+.||+|+||.||+|++. ++. .||+|.++... ...+++.+|+.+++.++||||. .+++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 46888899999999999999853 344 48999987432 3346788999999999999993 3589
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++.... ..+++..+++++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 87 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 87 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999999998754 358899999999999999999999 9999999999999999999999999999975421
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||++ |+.||...... .+.. ....+...
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-----~~~~----~~~~~~~~--- 230 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISS----ILEKGERL--- 230 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH----HHhCCCCC---
Confidence 16778999999999999998 99999753221 1111 11111100
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+......+.+++.+||+.+|++|||+.+++..+..+....
T Consensus 231 ------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 231 ------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 001112234556667999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=278.48 Aligned_cols=226 Identities=21% Similarity=0.237 Sum_probs=174.2
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-------------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-------------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-------------~~~l 341 (538)
.+.|+..+.|++|.||.||+|+ ..+++.||+|+++.... -.-...+||.+|.+++|||| ..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 3457777899999999999999 55789999999985442 23457899999999999999 3479
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|||||+. +|..+++... +.+...+..-++.|+++|++|||. .-|+||||||+|+|+...|.+||+|||+|+.++.
T Consensus 155 VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred eHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 9999987 9999998766 479999999999999999999999 9999999999999999999999999999997765
Q ss_pred C------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc--cCCcccc
Q 040267 422 D------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS--SGRIKDV 475 (538)
Q Consensus 422 ~------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 475 (538)
. |+++.|+||+|||+.|++++++-|.+....+... ..+..+-. +..+..+
T Consensus 230 p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~----~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 230 PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLD----KIFKLLGTPSEAIWPGY 305 (419)
T ss_pred CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHH----HHHHHhCCCccccCCCc
Confidence 3 8899999999999999999999998754432211 11111000 0001000
Q ss_pred --------------ccccccCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 476 --------------IDKALTGKG----YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 476 --------------~d~~l~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....++..+ .++...++++ ..+..||.+|.|++|.++.
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln---~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLN---KLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHH---HHhccCccccccHHHhhcc
Confidence 001111111 2244455555 9999999999999998763
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=297.28 Aligned_cols=210 Identities=25% Similarity=0.353 Sum_probs=168.9
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHHH
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYS 353 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~~ 353 (538)
.+-||.|+.|.||.|++ .++.||||+++.-+ ..+|+-|++++|+|| ..+||||||+.|-|..
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 46799999999999998 56789999886432 358999999999999 4579999999999999
Q ss_pred HhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------------
Q 040267 354 LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------------ 421 (538)
Q Consensus 354 ~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------ 421 (538)
.|+... .++......|..+||.|+.|||. ..|||||||.-||||..+..+||+|||.++....
T Consensus 202 VLka~~--~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVa 276 (904)
T KOG4721|consen 202 VLKAGR--PITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVA 276 (904)
T ss_pred HHhccC--ccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHh
Confidence 999876 68899999999999999999999 9999999999999999999999999999885433
Q ss_pred ----------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHH
Q 040267 422 ----------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQ 491 (538)
Q Consensus 422 ----------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 491 (538)
..++|+||||||||||||+||..||.+-..... +-.+-...+.-..++.+..-
T Consensus 277 WMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-----------------IwGVGsNsL~LpvPstcP~G 339 (904)
T KOG4721|consen 277 WMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-----------------IWGVGSNSLHLPVPSTCPDG 339 (904)
T ss_pred hhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-----------------EEeccCCcccccCcccCchH
Confidence 288999999999999999999999985332111 11111222222222333333
Q ss_pred HHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 492 FLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 492 l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
|.-|+.+||+..|..||++++|+..|+=...+
T Consensus 340 fklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 340 FKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred HHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 44444499999999999999999988754433
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=283.97 Aligned_cols=220 Identities=24% Similarity=0.390 Sum_probs=176.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++|...++||+|+||.||+|...++..||+|.++......+++.+|++++++++|+|| ..++||||+++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~ 85 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG 85 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCC
Confidence 4578889999999999999997777789999998655556789999999999999998 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.......+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+.....
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 86 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred cHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 99999986544468999999999999999999999 9999999999999999999999999999864321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++|||+| |+.||......+ + ... ...+. . ...
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~---~~~-~~~~~-----~----~~~ 224 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----V---LDQ-VERGY-----R----MPC 224 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----H---HHH-HhcCC-----C----CCC
Confidence 15678999999999999999 888887532211 1 111 11110 0 001
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
..+....+.+++.+|++.+|++||++.++++.|++.
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 112334456677799999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=307.69 Aligned_cols=223 Identities=20% Similarity=0.293 Sum_probs=181.6
Q ss_pred CCCCCCeEeecCCceEEEEEeCCC-CEEEEEEccc-ccccHHHHHHHHHHHhcCC-CCCC------------------cc
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDG-SMLAIKRLSA-CKLGEKQFLLEMKQVGLLK-HPNL------------------EK 339 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~-~~vavK~~~~-~~~~~~~~~~E~~~l~~l~-H~ni------------------~~ 339 (538)
+..+.+.|.+|||+.||.|....+ ..||+|++-. +....+.+.+||++|+.|+ |+|| +.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 455678999999999999996555 9999999854 3344567899999999997 9999 33
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
+|.||||++|.|-|++..+....|++.++++|+.++++|+++||. +.++|||||||-+||||+.++..||||||.|.-.
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 589999999999999987665569999999999999999999997 5678999999999999999999999999998732
Q ss_pred CC-----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHH
Q 040267 420 NG-----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWID 464 (538)
Q Consensus 420 ~~-----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 464 (538)
.. .+++|+||||+||+||-|+....||+....
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------------- 263 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------------- 263 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------------
Confidence 11 178999999999999999999999985311
Q ss_pred HHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 465 QLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 465 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..+++....-...+.....+.+|+..||+.||++||++-+|+..+.++...-.
T Consensus 264 --------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 264 --------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred --------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 12222222222223344555556669999999999999999999999876543
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=320.07 Aligned_cols=223 Identities=25% Similarity=0.397 Sum_probs=182.6
Q ss_pred CCCCCCeEeecCCceEEEEEeCC--CC----EEEEEEcccc--cccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD--GS----MLAIKRLSAC--KLGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~--~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
+.+....||+|.||.||+|...+ |. .||||.+++. .....+|.+|..+|+++.|||| ..++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34456789999999999999644 43 4999999864 3445779999999999999999 4469
Q ss_pred EEeecCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNG-----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
++|||++|+|..+|++.. ...++....+.++.|||+|+.||++ +++|||||-.+|+||++...+||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchh
Confidence 999999999999999762 3578999999999999999999999 99999999999999999999999999999
Q ss_pred cccCC-C------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccC
Q 040267 417 RLTNG-D------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSG 470 (538)
Q Consensus 417 ~~~~~-~------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (538)
+.+.. + +|.|+|||||||++||++| |..||......+ + .......+
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-----v---~~~~~~gg 921 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-----V---LLDVLEGG 921 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-----H---HHHHHhCC
Confidence 93321 1 8999999999999999999 999998643321 1 11122222
Q ss_pred CccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 471 RIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 471 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
++ +.++.+..++.+|+..||+.+|++||++..|++.+..+....
T Consensus 922 RL----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 922 RL----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred cc----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 21 233445667778888999999999999999999999987654
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=283.25 Aligned_cols=219 Identities=23% Similarity=0.396 Sum_probs=175.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++|...+.||+|++|.||+|...++..+|+|.++......+.+.+|+.++++++|+|+ ..+++|||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~ 85 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKG 85 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCC
Confidence 3577788999999999999998888899999998765566789999999999999998 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.++++......+++.++.+++.+++.||+|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05070 86 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence 99999987554568999999999999999999999 9999999999999999999999999999864321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++|||++ |+.||...... ..... ....... .. ...
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~---~~~~~~~------~~-~~~ 227 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-----EVLEQ---VERGYRM------PC-PQD 227 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH---HHcCCCC------CC-CCc
Confidence 15668999999999999999 89999753211 11111 1111000 00 111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.+ ..+.+++.+|++.+|++|||+.++.+.|++
T Consensus 228 ~~---~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 228 CP---ISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CC---HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 22 335556669999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=300.29 Aligned_cols=222 Identities=22% Similarity=0.350 Sum_probs=171.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~ 338 (538)
.++|...+.||+|+||.||+|+. .++..||||+++... ...+.+.+|++++..+ +|||| .
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 44688889999999999999973 235689999997533 2345688999999999 89999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCC-----------------------------------------------------------
Q 040267 339 KPLVYKYMSNGTLYSLLHSNG----------------------------------------------------------- 359 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 359 (538)
.++||||+++|+|.++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 469999999999999986432
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 360 --------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 360 --------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
...++|..+.+++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1247889999999999999999999 9999999999999999999999999999863321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++|||||||++|||++ |..||...... ..+..++ ..+...
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~----~~~~~~~----~~~~~~------ 336 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD----SKFYKMI----KEGYRM------ 336 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch----HHHHHHH----HhCccC------
Confidence 16789999999999999998 88898753221 1111211 111100
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
......+.++ .+++.+||+.||++|||+.||++.|++.
T Consensus 337 ~~~~~~~~~l---~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 LSPECAPSEM---YDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCHHH---HHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0111223344 4555599999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=283.40 Aligned_cols=216 Identities=24% Similarity=0.344 Sum_probs=173.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|+..+.||+|+||.||++...++..+|+|.+.......+++.+|++++++++|||| ..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 3477778999999999999998888899999987665566789999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.++++.... .+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.++....
T Consensus 84 ~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 84 GCLLNYLRQRQG-KLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred CcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 999999976432 58999999999999999999999 9999999999999999999999999998874321
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++ |+.||...... .....+ .. +.. ... ..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-----~~~~~i---~~-~~~--~~~----~~ 224 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EVVEMI---SR-GFR--LYR----PK 224 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHH---HC-CCC--CCC----CC
Confidence 15678999999999999999 89999753221 111111 11 110 001 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
..+. .+.+++.+||+.+|++|||+.|+++.|
T Consensus 225 ~~~~---~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 LASM---TVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCH---HHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1223 345566699999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=285.86 Aligned_cols=222 Identities=25% Similarity=0.402 Sum_probs=178.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc-cHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+..+|+..+.||.|+||.||+|...++..+|+|.+..... ...++.+|+.+++.++|+|+ ..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 4456888899999999999999987899999999976543 45678999999999999998 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.......+++.++.+++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+.....
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 999999999987655578999999999999999999999 9999999999999999999999999999864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++||||||+++|+|++ |+.||...... ...... .....
T Consensus 161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-----~~~~~~---~~~~~---------- 222 (261)
T cd05148 161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-----EVYDQI---TAGYR---------- 222 (261)
T ss_pred ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHH---HhCCc----------
Confidence 15678999999999999998 89999753321 111111 11000
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
...+......+.+++.+|++.||.+|||+.++++.|+.+
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 001111223455666699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=283.11 Aligned_cols=219 Identities=22% Similarity=0.391 Sum_probs=177.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++|...++||+|+||.||+|...+++.||+|.+.......+++.+|+.++++++|+|+ ..+++|||+++|
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENG 85 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCC
Confidence 4678889999999999999998889999999998766667789999999999999999 347999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.......+++.++..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||++.....
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 86 SLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence 99999977555578999999999999999999999 9999999999999999999999999999864331
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++||+++ |+.||...... .+.... . .+... .. ...
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~---~-~~~~~-----~~-~~~ 227 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQNL---E-RGYRM-----PR-PDN 227 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHH---H-cCCCC-----CC-CCC
Confidence 14678999999999999999 99999753221 111111 1 11000 00 111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.+.+ +.+++.+|++.+|++|||++++++.|+.
T Consensus 228 ~~~~---~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 228 CPEE---LYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCHH---HHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2334 4455559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=284.64 Aligned_cols=219 Identities=22% Similarity=0.297 Sum_probs=171.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||.||+|.+. .+..||+|.++... .....+.+|+.++.+++|||| ..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45778899999999999999853 35689999997543 223568899999999999999 44699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-- 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-- 420 (538)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+|++|||.+....
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 99999999999998653 368999999999999999999999 999999999999999999999999999765321
Q ss_pred ----------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 ----------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ----------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
..++.++|||||||++||+++ |+.||...... .+... ...+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~~~----~~~~~~----- 226 (266)
T cd05064 161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVIKA----VEDGFR----- 226 (266)
T ss_pred chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHH----HHCCCC-----
Confidence 116778999999999999875 99999753221 11111 111110
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.. .+......+.+++.+||+.+|++|||+.+|.+.|.++
T Consensus 227 ~~----~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 LP----APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC----CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00 1111223345556699999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=285.75 Aligned_cols=230 Identities=19% Similarity=0.252 Sum_probs=171.4
Q ss_pred CCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------------cccEE
Q 040267 283 SAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-------------EKPLV 342 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-------------~~~lv 342 (538)
...+.||+|+||+||.+.. .++..||+|.++... .....+.+|++++++++|||| ..+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778999999999988652 357899999997543 235678899999999999998 13699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 87 ~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 87 MEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred ecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 9999999999999764 39999999999999999999999 9999999999999999999999999999874321
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||+||+.||........ ....+.........+.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE---EMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh---hhhcccccccchhhhhhhh
Confidence 157789999999999999999999864321100 0000000000000111111
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
+.......+......+.+++.+||+.+|++|||+++|++.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111111112234555666999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=299.64 Aligned_cols=228 Identities=26% Similarity=0.371 Sum_probs=181.4
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC--C--CE-EEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD--G--SM-LAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~--~--~~-vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni----------- 337 (538)
..++....++||+|+||.||+|++.. + .. ||||..+.. .....+|.+|.++|+.++||||
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 33444555899999999999999543 3 23 899999842 2335779999999999999999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++|||+|+||+|.++|++.+. .++..++.+++.++|.||+|||+ ++++||||-.+|+|++.++.+||+|||+++
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 34699999999999999998764 69999999999999999999999 999999999999999999999999999998
Q ss_pred ccCC-----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 418 LTNG-----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 418 ~~~~-----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.... .++.++|||||||++||+++ |..||.+.... .+..++. ..+...
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-----~v~~kI~---~~~~r~ 382 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-----EVKAKIV---KNGYRM 382 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----HHHHHHH---hcCccC
Confidence 6531 18899999999999999999 88999864321 2233321 111100
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
......+.++..++. +||..+|++||||.+|.+.++.+......
T Consensus 383 ------~~~~~~p~~~~~~~~---~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 383 ------PIPSKTPKELAKVMK---QCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ------CCCCCCHHHHHHHHH---HhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 011234555555555 99999999999999999999998876543
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=280.93 Aligned_cols=219 Identities=22% Similarity=0.389 Sum_probs=174.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++|.....||+|++|.||+|...++..+|+|.+.......+.+.+|++++++++|+|+ ..+++|||+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKG 85 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCC
Confidence 3577778999999999999998777789999987655556789999999999999998 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.++++......+++..+..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||.+.....
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05069 86 SLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCC
Confidence 99999987554568999999999999999999999 9999999999999999999999999999874321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++|||+| |+.||...... ....+. . .+ .. ... ...
T Consensus 163 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~---~-~~-~~----~~~-~~~ 227 (260)
T cd05069 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-----EVLEQV---E-RG-YR----MPC-PQG 227 (260)
T ss_pred CccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH---H-cC-CC----CCC-Ccc
Confidence 14668999999999999999 89999753321 111111 1 11 00 000 111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.+.. +.+++.+||+.||++||++++|++.|++
T Consensus 228 ~~~~---~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 228 CPES---LHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cCHH---HHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2334 4445559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=299.19 Aligned_cols=224 Identities=22% Similarity=0.336 Sum_probs=171.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEcccccc--cHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACKL--GEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
..++|...+.||+|+||.||+|.. .++..||+|.++.... ..+.+.+|+++++.+ +|+||
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 345788899999999999999873 1245899999975332 235688999999999 89999
Q ss_pred cccEEEeecCCCCHHHHhhcCC----------------------------------------------------------
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNG---------------------------------------------------------- 359 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 359 (538)
..++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 3469999999999999986421
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---------
Q 040267 360 ----------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--------- 420 (538)
Q Consensus 360 ----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--------- 420 (538)
...+++.++.+++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 1247888999999999999999999 999999999999999999999999999986421
Q ss_pred ----------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 421 ----------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 421 ----------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
..++.++|||||||++|||++ |+.||....... .+ . .....+ . .... ..
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~---~-~~~~~~-~----~~~~-~~ 338 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KF---Y-KMVKRG-Y----QMSR-PD 338 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HH---H-HHHHcc-c----CccC-CC
Confidence 116789999999999999997 999997532211 01 1 111111 0 0000 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
..+.++. +++.+||+.||++|||+.+|++.|+++.
T Consensus 339 ~~~~~l~---~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 FAPPEIY---SIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCHHHH---HHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1233444 4555999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=285.30 Aligned_cols=226 Identities=23% Similarity=0.324 Sum_probs=169.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-----------------CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc--
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-----------------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-- 338 (538)
++|...+.||+|+||.||+|...+ +..||+|.++... ....++.+|++++.+++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467788899999999999997532 3479999987532 2345789999999999999992
Q ss_pred ---------ccEEEeecCCCCHHHHhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 040267 339 ---------KPLVYKYMSNGTLYSLLHSNG-----------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392 (538)
Q Consensus 339 ---------~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 392 (538)
.++||||+++|+|.+++.... ...++|..+.+++.|++.||+|||+ .+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence 469999999999999986532 1247889999999999999999999 99999
Q ss_pred cCCCCCCeeeCCCCCeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh--CCCC
Q 040267 393 QNISSSVILVDEDFDARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT--GQKP 445 (538)
Q Consensus 393 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt--g~~p 445 (538)
|||||+|||+++++.+||+|||+++... ..++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999987431 116778999999999999987 5677
Q ss_pred CCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 446 FEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
|...... .....+.............. .... ....+.+++.+||+.||++|||+.||.+.|++
T Consensus 242 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELTDE-----QVIENAGEFFRDQGRQVYLF---RPPP---CPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCCHH-----HHHHHHHHHhhhcccccccc---CCCC---CCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 7643221 22222222221111000000 0111 22345566669999999999999999988863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=281.41 Aligned_cols=215 Identities=24% Similarity=0.340 Sum_probs=171.8
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
+|+..+.||+|+||.||+|...++..+|+|.+........++.+|++++++++|+|| ..++||||++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 467778999999999999998777899999987655556789999999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 85 ~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 85 CLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred CHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 99999976543 68999999999999999999999 9999999999999999999999999998864211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++||+++ |+.||...... .... ... .+ ..... ...
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~---~~~-~~-----~~~~~-~~~ 225 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVVE---SVS-AG-----YRLYR-PKL 225 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHHH---HHH-cC-----CcCCC-CCC
Confidence 15678999999999999999 89999753221 1111 111 11 00011 111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
.+. .+.+++.+||..+|++|||+.|+++.|
T Consensus 226 ~~~---~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APT---EVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCH---HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 223 455566699999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=298.01 Aligned_cols=219 Identities=26% Similarity=0.394 Sum_probs=183.3
Q ss_pred CCCCeEeecCCceEEEEE-eCCCC----EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCcc----------cEEEee
Q 040267 283 SAQNVLVSTWTGTTYKAM-LLDGS----MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLEK----------PLVYKY 345 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~-~~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~~----------~lv~e~ 345 (538)
...++||.|+||+||+|. .+.|+ +||+|.+.... +..+++.+|+-+|.+++|||+.+ .||++|
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~ 778 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL 778 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence 345889999999999998 45543 79999986533 44688999999999999999943 389999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
|+.|+|.++++.++ ..+.-...+.|+.|||+||.|||+ ++++||||-.+|||+..-..+||.|||+++....+
T Consensus 779 mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred cccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999999999865 368889999999999999999999 99999999999999999999999999999977643
Q ss_pred ----------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
++.++|||||||++||++| |..||+....++ +.+++...
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e------------------I~dlle~g 916 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE------------------IPDLLEKG 916 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH------------------hhHHHhcc
Confidence 8999999999999999999 999998644322 12222222
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.+-..++-...++..++++||..|++.||+++++..++.++...
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 22334555777888899999999999999999999999987764
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=281.17 Aligned_cols=216 Identities=24% Similarity=0.329 Sum_probs=172.1
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
+|...+.||+|++|.||+|...++..+|+|.++......+++.+|+.++.+++|||| ..++||||+++|
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG 84 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence 466778999999999999998777789999998655556789999999999999999 246999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++..... .+++.++++++.|++.||+|||+ .+++|+||||+||++++++.+||+|||.++....
T Consensus 85 ~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 85 CLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred cHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 99999976543 68999999999999999999999 9999999999999999999999999998874321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++|||++ |+.||...... .+.. ... .+.... ....
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~---~~~-~~~~~~------~~~~ 225 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ETVE---KVS-QGLRLY------RPHL 225 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHH---HHh-cCCCCC------CCCC
Confidence 15778999999999999999 99998743221 1111 111 111000 0111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
.+ ..+.+++.+||+.+|.+||++.++++.|+
T Consensus 226 ~~---~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 AS---EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CC---HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 22 34455666999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=288.85 Aligned_cols=214 Identities=22% Similarity=0.346 Sum_probs=172.5
Q ss_pred HHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccc----c--ccHHHHHHHHHHHhcCC-CCCC-----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSAC----K--LGEKQFLLEMKQVGLLK-HPNL----------- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~----~--~~~~~~~~E~~~l~~l~-H~ni----------- 337 (538)
...++|...+.||+|.||+||.|. ..++..||+|.+... . ...+.+.+|+.++++++ ||||
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345678889999999999999998 456899999977653 1 22456778999999999 9999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFS 416 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 416 (538)
..++||||+.+|+|.+++...+ .+.+.++.+++.|++.|++|+|+ .+|+||||||+|||+|.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 3469999999999999999855 68999999999999999999999 999999999999999999 99999999999
Q ss_pred cccC-CC------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 417 RLTN-GD------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 417 ~~~~-~~------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.... .. .+.++||||+||+||.|++|+.||++... ..-... +..+.
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--------~~l~~k-i~~~~ 239 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--------PNLYRK-IRKGE 239 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--------HHHHHH-HhcCC
Confidence 9772 21 25789999999999999999999986322 111111 11221
Q ss_pred ccccccccccCCCc-HHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 040267 472 IKDVIDKALTGKGY-DDEILQFLQIACKCVAVRPKEKWSMYQVY 514 (538)
Q Consensus 472 ~~~~~d~~l~~~~~-~~~~~~l~~l~~~cl~~dP~~RPs~~evl 514 (538)
+. + +... +.+...++. +|+..||.+|+|+.||+
T Consensus 240 ~~--~-----p~~~~S~~~~~Li~---~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 FK--I-----PSYLLSPEARSLIE---KMLVPDPSTRITLLEIL 273 (370)
T ss_pred cc--C-----CCCcCCHHHHHHHH---HHcCCCcccCCCHHHHh
Confidence 10 0 1111 445566666 99999999999999999
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=280.67 Aligned_cols=219 Identities=23% Similarity=0.358 Sum_probs=173.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
++|+..+.||+|+||.||+|.... ...||+|.++... ....+|.+|+.++++++|||| ..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568889999999999999999642 4589999987533 234578899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++..... .+++.++.+++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 999999999999976543 68999999999999999999999 9999999999999999999999999999876531
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||++ |..||...... .+.... ..+...
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~----~~~~~~--- 227 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DVIKAV----EDGYRL--- 227 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HHHHHH----HcCCCC---
Confidence 15678999999999999998 99999643211 111111 111000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
+ ........+.+++.+|++.+|++||++.||++.|+++
T Consensus 228 -~-----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 -P-----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -C-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0111223355666699999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=286.81 Aligned_cols=212 Identities=28% Similarity=0.436 Sum_probs=163.3
Q ss_pred CCeEeecCCceEEEEEeC-----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 285 QNVLVSTWTGTTYKAMLL-----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.+.||.|.||.||+|.+. .+..|+||.++... ...+++.+|++.+++++|||| ..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999965 25689999996532 235789999999999999999 235899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++.......+++.++.+|+.||+.||+|||+ .+++|+||+++||++++++.+||+|||++......
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 99999999998744579999999999999999999999 89999999999999999999999999999876211
Q ss_pred ---------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||||+++|||++ |+.||..... ..+.... ..+.....
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--------~~~~~~~-~~~~~~~~----- 226 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--------EEIIEKL-KQGQRLPI----- 226 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--------HHHHHHH-HTTEETTS-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccc-ccccccee-----
Confidence 6889999999999999999 7889875321 1222222 11111110
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
....+.. +.+++.+||+.||++|||+.++++.|
T Consensus 227 -~~~~~~~---~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 -PDNCPKD---IYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -BTTSBHH---HHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -ccchhHH---HHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1112233 44555599999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=291.44 Aligned_cols=223 Identities=21% Similarity=0.313 Sum_probs=172.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCCc------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNLE------------ 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni~------------ 338 (538)
++|...+.||+|+||.||+|... +++.||+|+++... ...+.+.+|+.++.++ +|+||.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 36788899999999999999632 25789999987532 2235678899999999 799982
Q ss_pred ccEEEeecCCCCHHHHhhcCC-----------------------------------------------------------
Q 040267 339 KPLVYKYMSNGTLYSLLHSNG----------------------------------------------------------- 359 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 359 (538)
.++++||+++|+|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 358899999999999986421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-------------------
Q 040267 360 NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------------------- 420 (538)
Q Consensus 360 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------------------- 420 (538)
...++|..+.+++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++.+.
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 1258999999999999999999999 999999999999999999999999999987531
Q ss_pred ------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHH
Q 040267 421 ------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFL 493 (538)
Q Consensus 421 ------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 493 (538)
..++.++|||||||++|||++ |+.||......+ .+. .....+... .. .. .....+.
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~----~~~----~~~~~~~~~-----~~-~~---~~~~~~~ 306 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE----EFC----RRLKEGTRM-----RA-PE---YATPEIY 306 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH----HHH----HHHhccCCC-----CC-Cc---cCCHHHH
Confidence 116778999999999999998 999997532211 111 111111100 00 11 1223456
Q ss_pred HHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 494 QIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 494 ~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
+++.+||+.+|++||++.||++.|+++.+
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 66779999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=292.15 Aligned_cols=212 Identities=23% Similarity=0.330 Sum_probs=176.8
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
-|..++.||.|+.|.|..|+ ..+|+.+|||++.+.. .....+.+|+.+|+-+.|||+ ..|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 46677899999999999999 5689999999997542 223568899999999999999 5679999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++|.|++++...+ .+++.++.+++.||+.|+.|+|. .+|+|||+||+|+|||..+++||+|||+|.+-.++
T Consensus 93 yv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred ecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 999999999999887 69999999999999999999999 99999999999999999999999999999864332
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.+.++||||.|||||.|+||+.||+++ ++...+.+ ++.|.+. .
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd--------Nir~LLlK-V~~G~f~-------M 231 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD--------NIRVLLLK-VQRGVFE-------M 231 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc--------cHHHHHHH-HHcCccc-------C
Confidence 567999999999999999999999853 22222222 2233322 1
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+...+.++++++. +|+..||++|.|++||++.
T Consensus 232 Ps~Is~eaQdLLr---~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 232 PSNISSEAQDLLR---RMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CCcCCHHHHHHHH---HHhccCccccccHHHHhhC
Confidence 2344567777777 9999999999999999875
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=281.59 Aligned_cols=217 Identities=20% Similarity=0.258 Sum_probs=167.3
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
|...+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++.+++|+|+ ..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66778999999999999994 579999999986432 223457899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++.....
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV 158 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee
Confidence 999999988875544468999999999999999999999 9999999999999999999999999999875321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||....... ...-+......... .. ..
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~------~~-~~ 226 (285)
T cd05631 159 RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-----KREEVDRRVKEDQE------EY-SE 226 (285)
T ss_pred cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-----hHHHHHHHhhcccc------cC-Cc
Confidence 16789999999999999999999998543211 00111111111000 01 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 516 (538)
..+.++..+++ +||+.||.+||+ ++++++.
T Consensus 227 ~~s~~~~~li~---~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 227 KFSEDAKSICR---MLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred cCCHHHHHHHH---HHhhcCHHHhcCCCCCCHHHHhcC
Confidence 12334555555 999999999997 7888763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=284.01 Aligned_cols=219 Identities=25% Similarity=0.396 Sum_probs=171.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-C-----CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-G-----SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-~-----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|+..+.||+|+||.||+|.... + ..||+|.++... ....++.+|++++.+++|||| ..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 357778899999999999998533 2 579999987533 224568999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF 406 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 406 (538)
++|||+++|+|.+++..... ..+++.++..++.|++.||+|||+ .+++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence 89999999999999976421 358899999999999999999999 9999999999999999999
Q ss_pred CeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHH
Q 040267 407 DARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLV 460 (538)
Q Consensus 407 ~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 460 (538)
.+||+|||+++... ..++.++|||||||++|||++ |..||...... .+.
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-----~~~ 236 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-----EVI 236 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHH
Confidence 99999999886421 116778999999999999998 99999753321 122
Q ss_pred HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 461 NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
..+ ..+.... .+......+.+++.+||+.||++||++.||++.|++
T Consensus 237 ~~i----~~~~~~~---------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 237 EMI----RSRQLLP---------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHH----HcCCcCC---------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 211 1111111 111222344555569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=280.79 Aligned_cols=218 Identities=20% Similarity=0.316 Sum_probs=167.3
Q ss_pred CCCCCeEeecCCceEEEEEeCC-CC--EEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCcc----------------
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD-GS--MLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLEK---------------- 339 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~~---------------- 339 (538)
|...+.||+|+||.||+|...+ +. .||+|.++... ...+.+.+|++++++++|+||.+
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3456889999999999999654 33 69999987532 23456889999999999999822
Q ss_pred -cEEEeecCCCCHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 340 -PLVYKYMSNGTLYSLLHSN----GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 340 -~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
++++||+++|+|.+++... ....+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence 4899999999999987432 12458999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhc
Q 040267 415 FSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 415 ~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
+++.... .++.++||||||+++|||++ |+.||...... .+ . ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~---~-~~~~ 228 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-----EI---Y-DYLR 228 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HH---H-HHHH
Confidence 9875321 15678999999999999999 88898752211 11 1 1111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.+.... . ....++ .+.+++.+||+.||++|||+.|+++.|+++
T Consensus 229 ~~~~~~-----~-~~~~~~---~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 QGNRLK-----Q-PPDCLD---GLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred cCCCCC-----C-CCCCCH---HHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111110 0 111222 345566699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=280.93 Aligned_cols=222 Identities=20% Similarity=0.293 Sum_probs=171.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCC----EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGS----MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|.. .++. .+++|.+.... ....++..|+..++++.||||+ .+++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i 86 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV 86 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence 3577778999999999999995 3454 47888875432 2235678888899999999993 3589
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 87 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 87 TQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999997644 268999999999999999999999 9999999999999999999999999999864311
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++||+++ |+.||...... .+.++ ...+... .
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~----~~~~~~~--~ 231 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EVPDL----LEKGERL--A 231 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHH----HHCCCcC--C
Confidence 16778999999999999998 99999753221 11111 1111111 0
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.+ ... ...+.+++.+||..+|++|||+.|+++.|..+.+.
T Consensus 232 ~~----~~~---~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 232 QP----QIC---TIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CC----CCC---CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 11 111 22345566699999999999999999999987753
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=281.68 Aligned_cols=225 Identities=24% Similarity=0.331 Sum_probs=175.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCC----EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGS----MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~l 341 (538)
.++|...+.||+|+||+||+|.. .++. .||+|.++... ...+++.+|+.++..++|+||. .++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l 85 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL 85 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence 34678889999999999999984 4554 48999986432 2346788999999999999993 358
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
++||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 86 ~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999997643 368999999999999999999999 9999999999999999999999999999874321
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++|||||||++|||++ |..||..... ..+..++. .+....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~----~~~~~~- 231 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----REIPDLLE----KGERLP- 231 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHH----CCCcCC-
Confidence 15778999999999999998 8999874321 11222221 111000
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
........+.+++.+||+.||++||++.|+++.|+++....+
T Consensus 232 --------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05109 232 --------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPS 273 (279)
T ss_pred --------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCc
Confidence 011122344556669999999999999999999998876553
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=288.22 Aligned_cols=227 Identities=22% Similarity=0.299 Sum_probs=183.4
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.....++||+|.||.|..+....+..||||.++... ..+.+|.+|+++|.+++|||| ..++|+|||+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 345668899999999999999888999999998643 445789999999999999999 3358999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++.++....+.-....+|+.|||.|++||.+ .++||||+.+.|+|+|.++++||+|||+++-+..
T Consensus 619 nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 619 NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 9999999998864344556678899999999999999 9999999999999999999999999999994322
Q ss_pred -------------------CCCCccCcccHHHHHHHHHh--CCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVT--GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+|.++|||+||+++||+++ ..+||.....+ .+++-...+...+..+.+.
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e-----~vven~~~~~~~~~~~~~l---- 766 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE-----QVVENAGEFFRDQGRQVVL---- 766 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH-----HHHHhhhhhcCCCCcceec----
Confidence 18999999999999999866 88999864332 3344444444333222111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
..+..+...+.+++++||..|..+|||++++...|++..
T Consensus 767 --~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 767 --SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred --cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 112335566788999999999999999999999888753
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=277.38 Aligned_cols=219 Identities=24% Similarity=0.411 Sum_probs=175.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|+..+.||.|++|.||+|.. .|+.||+|.++......+++.+|+.++++++|+|+ ..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4678889999999999999987 47899999998655456789999999999999998 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
++|.+++.......+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||.++....
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 161 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKL 161 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccccCCC
Confidence 999999987665569999999999999999999999 9999999999999999999999999998875321
Q ss_pred -------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDD 487 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 487 (538)
.++.++||||||+++||+++ |+.||...... .+... ...+.... . ....++
T Consensus 162 ~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~----~~~~~~~~-----~-~~~~~~ 226 (256)
T cd05039 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPH----VEKGYRME-----A-PEGCPP 226 (256)
T ss_pred cccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH----HhcCCCCC-----C-ccCCCH
Confidence 15668999999999999998 99998753221 11111 11110000 0 011223
Q ss_pred HHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 488 EILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 488 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
. +.+++.+|++.+|++|||+.|++++|+.+
T Consensus 227 ~---~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 227 E---VYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred H---HHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 3 44555599999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=281.40 Aligned_cols=213 Identities=16% Similarity=0.263 Sum_probs=168.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++|||| ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999954 68999999986432 223568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 9999999999998765 58999999999999999999999 9999999999999999999999999999875432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ....... .+.. .+. .
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--------~~~~~i~-~~~~------~~~-~ 219 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--------GIYEKIL-AGKL------EFP-R 219 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-hCCc------CCC-c
Confidence 1678899999999999999999999753221 1111111 1111 011 1
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 516 (538)
..+..+.++++ +|++.||.+||+ ++|+++.
T Consensus 220 ~~~~~~~~li~---~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 220 HLDLYAKDLIK---KLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred cCCHHHHHHHH---HHcCCCHHHccCCccCCHHHHhcC
Confidence 12334555555 999999999995 7887754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=282.58 Aligned_cols=219 Identities=21% Similarity=0.263 Sum_probs=168.7
Q ss_pred HHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc---------------cHHHHHHHHHHHhcCCCCCC---
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL---------------GEKQFLLEMKQVGLLKHPNL--- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~H~ni--- 337 (538)
+..+.|.....||+|.||.|-+|+ ..+++.||||++.+... ..++..+||.+|++++||||
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 445678889999999999999999 55799999999964221 12578999999999999999
Q ss_pred ----------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC
Q 040267 338 ----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD 407 (538)
Q Consensus 338 ----------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 407 (538)
..|||+|||..|.+...=... ..++..++.+|++++..||+|||. ++||||||||+|+||+++|+
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~--~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDK--PELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCCc--ccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence 447999999988775432221 139999999999999999999999 99999999999999999999
Q ss_pred eEEEeccCCcccCCC--------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccc
Q 040267 408 ARIMDFGFSRLTNGD--------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGY 455 (538)
Q Consensus 408 ~kl~Dfg~a~~~~~~--------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~ 455 (538)
+||+|||.+...... .+.+.||||+||+||.|+.|+.||-+....
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~--- 325 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL--- 325 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH---
Confidence 999999998855211 456789999999999999999999853321
Q ss_pred cccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 456 KGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
+.. .+++...+.-...++.-..+-+|+.++|..||++|.+..+|....
T Consensus 326 -----~l~---------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 326 -----ELF---------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred -----HHH---------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 111 223333332212222223333444599999999999999887654
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=276.96 Aligned_cols=218 Identities=22% Similarity=0.360 Sum_probs=173.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEeecC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYMS 347 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~~ 347 (538)
.+|...+.||+|+||.||++.. .|..||+|.++... ..+.+.+|+.++++++|+|+ ..++++||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 3677889999999999999986 47889999986533 35678999999999999999 2468999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++.......+++..+.+++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 9999999987665568999999999999999999999 9999999999999999999999999999875321
Q ss_pred --------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 422 --------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 422 --------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
.++.++||||||+++|||++ |+.||.... ........ ..+... .. ....+
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~-~~~~~~-----~~-~~~~~ 225 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRV-EKGYKM-----DA-PDGCP 225 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-hcCCCC-----CC-CCCCC
Confidence 16778999999999999998 999987422 11111111 111100 01 11122
Q ss_pred HHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 487 DEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.. +.+++.+|++.+|++|||+.++++.|+++
T Consensus 226 ~~---~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 226 PV---VYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HH---HHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 34 44555599999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=277.11 Aligned_cols=220 Identities=23% Similarity=0.404 Sum_probs=177.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.++|...+.||+|++|.||+|...++..||||.+.......+++.+|+.++++++|+|+ ..++||||++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 45788889999999999999998788899999998766667889999999999999999 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+++|.+++.......+++.++..++.+++.|++|||+ .+++|+||||+||++++++.+||+|||.+.....
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 9999999987655579999999999999999999999 8999999999999999999999999998875431
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++||++| |+.||...... .... ..... .. ... .
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~---~~~~~--~~----~~~-~ 226 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-----EVLE---QVERG--YR----MPR-P 226 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---HHHcC--CC----CCC-C
Confidence 15778999999999999999 99999643211 1111 11110 00 000 0
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
...+. .+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ~~~~~---~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 PNCPE---ELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCH---HHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11123 34555669999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=284.93 Aligned_cols=212 Identities=21% Similarity=0.348 Sum_probs=173.7
Q ss_pred cCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccH---HHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|.||+||||+ ..+.+.||+|.+.+..... +.+.+|++++++++|||| ..++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 467788899999999999999 4568899999997654433 458899999999999999 4579999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+.+ +|+.++...+ .++++.+..|+.++..||.|||+ .+|+|||+||.|||++..+.+|++|||+|+.....
T Consensus 82 ~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred hhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCce
Confidence 9987 9999999877 69999999999999999999999 99999999999999999999999999999965432
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
|+..+|.||+||++||+++|++||... .+...++....+ +...
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--------si~~Lv~~I~~d--------~v~~ 219 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--------SITQLVKSILKD--------PVKP 219 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--------HHHHHHHHHhcC--------CCCC
Confidence 888999999999999999999999742 333344333321 1111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.+...+++ ..+..||.+|.|-.+++..
T Consensus 220 p~~~S~~f~nfl~---gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 220 PSTASSSFVNFLQ---GLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred cccccHHHHHHHH---HHhhcChhhcccHHHHhcC
Confidence 1122334444555 9999999999999988753
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=276.23 Aligned_cols=219 Identities=21% Similarity=0.403 Sum_probs=175.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++|...+.||+|+||.||++...++..+|+|.++......+.+.+|++++++++|+|+ ..+++|||+++|
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKG 85 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCC
Confidence 4678889999999999999998778889999987655556789999999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.......+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||.+.....
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 86 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred cHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence 99999987554568999999999999999999999 9999999999999999999999999998764321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++||++| |+.||...... .+..+. ..+.... . ...
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~----~~~~~~~-----~-~~~ 227 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRAL----ERGYRMP-----R-PEN 227 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHH----hCCCCCC-----C-ccc
Confidence 15668999999999999999 99999753221 111111 1110000 0 011
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.+.+ +.+++.+|++.+|++||++.++.+.|+.
T Consensus 228 ~~~~---~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 228 CPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCHH---HHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2233 4555559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=293.43 Aligned_cols=225 Identities=21% Similarity=0.298 Sum_probs=172.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEccccc--ccHHHHHHHHHHHhcCC-CCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLK-HPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-H~ni----------- 337 (538)
..++|...++||+|+||.||+|+... +..||||+++... ...+.+.+|+++++++. ||||
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 35678888999999999999998421 3479999997533 22457899999999996 9999
Q ss_pred cccEEEeecCCCCHHHHhhcCC----------------------------------------------------------
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNG---------------------------------------------------------- 359 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 359 (538)
..++||||+++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 3469999999999999986531
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 360 ------------------------------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 360 ------------------------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
...+++..+.+++.|++.||+|||+ .+|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEe
Confidence 1247888999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccc
Q 040267 404 EDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKG 457 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 457 (538)
+++.+||+|||+++.... .++.++|||||||++|||++ |..||.......
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~---- 347 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS---- 347 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH----
Confidence 999999999999864311 16788999999999999997 999987532111
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.+. .....+.. . .........+.+++.+||+.||++|||+.+|.+.|+++.+
T Consensus 348 ~~~----~~~~~~~~-----~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 TFY----NKIKSGYR-----M----AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHH----HHHhcCCC-----C----CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111 11111100 0 0111122345566669999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=279.81 Aligned_cols=228 Identities=21% Similarity=0.265 Sum_probs=170.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-----CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-----DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
.+|...+.||+|+||.||++... ++..||+|.++... ...+.+.+|++++++++|||++ .+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46777889999999999999742 47899999987543 2345789999999999999982 35
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 8999999999999997643 258999999999999999999999 999999999999999999999999999987432
Q ss_pred C--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccc------c-ccHHHHHHHHh
Q 040267 421 G--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGY------K-GNLVNWIDQLS 467 (538)
Q Consensus 421 ~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~------~-~~~~~~~~~~~ 467 (538)
. .++.++||||||+++|||++|..|+......... . ...........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 1 1567899999999999999988776432111000 0 00000010111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
... ............+.+++.+||+.+|++||||.||++.|+++
T Consensus 240 ~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 240 KNN---------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hcC---------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 110 00001111123355566699999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=281.04 Aligned_cols=224 Identities=23% Similarity=0.398 Sum_probs=174.3
Q ss_pred CCCCCCeEeecCCceEEEEEeC------CCCEEEEEEcccccc-cHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACKL-GEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|...+.||+|+||.||+|... ++..+++|.++.... ..+.+.+|++++++++|+|| ..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4677789999999999999842 345799999875432 34578999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
|||+++++|.+++.... ...+++..+++++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcE
Confidence 99999999999997542 1348999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||++..... .++.++||||||+++|||+| |+.||...... ...+.
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----~~~~~ 237 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT-----EVIEC 237 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 9999999863211 15778999999999999999 99998653221 11111
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
...+..... ....+ ..+.+++.+||+.+|++|||+.+|+++|+++.+...
T Consensus 238 ----~~~~~~~~~------~~~~~---~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 238 ----ITQGRVLER------PRVCP---KEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred ----HhCCCCCCC------CccCC---HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 111111111 11112 334556669999999999999999999999976543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=275.35 Aligned_cols=211 Identities=22% Similarity=0.345 Sum_probs=164.4
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++++++|||| ..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999995 478999999886432 234678999999999999999 34699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 99997543 358999999999999999999999 9999999999999999999999999998763211
Q ss_pred ---------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ---------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ---------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||||+++|||++ |..||...... . ......... .... ....
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-----~----~~~~~~~~~-----~~~~-~~~~ 221 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-----Q----TREAIEQGV-----RLPC-PELC 221 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-----H----HHHHHHcCC-----CCCC-cccC
Confidence 15667899999999999998 88888643221 1 111111110 0000 1112
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
+. .+.+++.+|++.+|++|||+.||+++|+
T Consensus 222 ~~---~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PD---AVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CH---HHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 23 3455555999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=284.72 Aligned_cols=221 Identities=20% Similarity=0.251 Sum_probs=170.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|+++... .....+.+|++++..++|||| ..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888899999999999999965 58999999997532 223568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~ 155 (333)
T cd05600 81 EYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYA 155 (333)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccccc
Confidence 9999999999998655 58999999999999999999999 9999999999999999999999999999874321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||......+.. ..+..|.... ......++. .
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~~~----~~~~~~~~~---~ 227 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW-ENLKYWKETL----QRPVYDDPR---F 227 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH-HHHHhccccc----cCCCCCccc---c
Confidence 1688999999999999999999999754322110 0111110000 000000000 1
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..++++..++. +|+..+|++||++.|+++.
T Consensus 228 ~~s~~~~~li~---~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLIT---KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHH---HHhhChhhhcCCHHHHHhC
Confidence 12344555555 9999999999999999865
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=280.45 Aligned_cols=222 Identities=24% Similarity=0.346 Sum_probs=171.4
Q ss_pred CCCCCCeEeecCCceEEEEEeC------CCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCCc-----------ccE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNLE-----------KPL 341 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni~-----------~~l 341 (538)
+|...+.||+|+||.||+|+.. ....+|+|.+..... ..+++.+|+.+++.++||||. .++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999842 235799998875332 235788999999999999993 458
Q ss_pred EEeecCCCCHHHHhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCC
Q 040267 342 VYKYMSNGTLYSLLHSNG----------------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 399 (538)
++||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence 999999999999986421 1358899999999999999999999 999999999999
Q ss_pred eeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccc
Q 040267 400 ILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEE 453 (538)
Q Consensus 400 Ill~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~ 453 (538)
|++++++.+||+|||+++.... .++.++||||||+++|||+| |+.||......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 9999999999999999864311 15778999999999999999 99999753221
Q ss_pred cccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 454 GYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.+..++. ... .... ....+ ..+.+++.+|++.+|++||++.|+++.|+++..+
T Consensus 237 ----~~~~~~~----~~~-----~~~~-~~~~~---~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 237 ----RLFNLLK----TGY-----RMER-PENCS---EEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred ----HHHHHHh----CCC-----CCCC-CCCCC---HHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 1222111 110 0000 11122 3455566699999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=274.89 Aligned_cols=231 Identities=24% Similarity=0.317 Sum_probs=169.1
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcc----------------cEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK----------------PLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~----------------~lv~ 343 (538)
.|...+++|.|+||+||+|.. .+++.||||+...+.. ---+|+++|+++.||||++ .+||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 355668999999999999995 4579999999865432 1236999999999999933 2799
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~ 420 (538)
||||. +|.++++.. .+..++.-.+.-++.|+.+||+|||+ .+|+||||||.|+|+|.+ |.+||+|||.|+.+.
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 99997 999999852 22457888888999999999999999 999999999999999976 999999999999664
Q ss_pred CC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc--------
Q 040267 421 GD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS-------- 469 (538)
Q Consensus 421 ~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 469 (538)
.. |+.+.||||.|||+.||+-|++-|.+.+..+. ++..++-+-..
T Consensus 178 ~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ----L~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 178 KGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ----LVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred cCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH----HHHHHHHhCCCCHHHHhhc
Confidence 32 89999999999999999999999987544321 22222111000
Q ss_pred -CCccccccccccCCC-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHhHH
Q 040267 470 -GRIKDVIDKALTGKG-----YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSIAE 522 (538)
Q Consensus 470 -~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i~~ 522 (538)
....+.-.+.+.... ......+.++++.++++.+|.+|.++.|++.. ..++++
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 001111112221111 11122334555559999999999999999863 444443
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=277.42 Aligned_cols=231 Identities=18% Similarity=0.211 Sum_probs=167.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|+..+.||+|+||.||+|+.. +++.||+|+++... ...+.+.+|++++++++|||| ..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999964 58899999987532 234568899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|++++.+..+..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEEMPN--GVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 999877765544332 58999999999999999999999 9999999999999999999999999999875321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccccccc-------ccHHHHHHHHhccCCcc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK-------GNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 473 (538)
.++.++|||||||++|||++|+.||......+... .....+...........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 16778999999999999999999997643221100 00000111111111111
Q ss_pred ccccccccCCC------cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKG------YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+...... .......+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11001000000 0001123555666999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=277.24 Aligned_cols=220 Identities=22% Similarity=0.367 Sum_probs=173.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CC---CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DG---SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
.++|+..+.||+|+||.||+|+.. ++ ..+|+|.++... ...+++..|++++++++|+|+ ..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346788899999999999999964 33 379999987542 234678999999999999998 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++++|.+++.... ..+++.++..++.|++.|++|||+ .+++|+||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997643 368999999999999999999999 9999999999999999999999999998864321
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++|||||||++||+++ |+.||..... .++..........
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~~~~~-- 229 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGFRL-- 229 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhcCCCC--
Confidence 15678999999999999998 9999974322 1122221111110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
....+....+.+++.+|++.+|++||++.+|++.|.++
T Consensus 230 --------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 --------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01111223456677799999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=280.41 Aligned_cols=224 Identities=24% Similarity=0.377 Sum_probs=174.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
.+|...+.||+|+||.||++... ++..+|+|.+.... ...+.+.+|++++++++|||+ ..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46778899999999999999842 24569999987533 334678999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 342 VYKYMSNGTLYSLLHSNG-----------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
||||+++|+|.+++...+ ...+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence 999999999999997542 1358999999999999999999999 99999999999999999999999
Q ss_pred EeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHH
Q 040267 411 MDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWID 464 (538)
Q Consensus 411 ~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 464 (538)
+|||+++.... .++.++||||||+++|||+| |+.||...... .+..
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-----~~~~--- 233 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIE--- 233 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---
Confidence 99999863311 16778999999999999999 89998753221 1111
Q ss_pred HHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 465 QLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 465 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
. ...+.... . ....+.+ +.+++.+||+.||.+|||+.||.+.|+++....
T Consensus 234 ~-i~~~~~~~-----~-~~~~~~~---l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 234 C-ITQGRVLQ-----R-PRTCPKE---VYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred H-HHcCCcCC-----C-CCCCCHH---HHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 1 11111111 0 1112223 555666999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=275.60 Aligned_cols=210 Identities=22% Similarity=0.281 Sum_probs=165.2
Q ss_pred eEeecCCceEEEEEe---CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCCC
Q 040267 287 VLVSTWTGTTYKAML---LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNGT 350 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~gs 350 (538)
.||+|+||.||+|.+ .++..+|+|+++.... ..+++.+|+.+++.++|+|| ..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 589999999999974 3578999999864332 24678999999999999998 3358999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---------
Q 040267 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--------- 421 (538)
Q Consensus 351 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--------- 421 (538)
|.+++.... .+++..+.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++....
T Consensus 82 L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 82 LNKFLQKNK--HVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred HHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 999997654 58999999999999999999999 9999999999999999999999999999864321
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++ |+.||...... .+... ...+.... .. .
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~-i~~~~~~~-----~~-~ 221 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------EVTQM-IESGERME-----CP-Q 221 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH-HHCCCCCC-----CC-C
Confidence 14568999999999999998 99999753221 11111 12211111 11 1
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
..+.++.+ ++.+||+.||++||++.+|.+.|++
T Consensus 222 ~~~~~l~~---li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 222 RCPPEMYD---LMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCHHHHH---HHHHHhccCchhCcCHHHHHHHHhc
Confidence 12334444 4559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=275.88 Aligned_cols=218 Identities=21% Similarity=0.340 Sum_probs=169.9
Q ss_pred CCCCCeEeecCCceEEEEEeCC----CCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
|...+.||+|+||.||+|.... +..||+|.++.... ....+.+|++.++.++|||+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999998532 36899999875332 235689999999999999981
Q ss_pred -ccEEEeecCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNG----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
.++++||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence 368999999999999985432 2468999999999999999999999 99999999999999999999999999
Q ss_pred cCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHh
Q 040267 414 GFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 414 g~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
|+++.... .++.++||||||+++|||++ |..||...... .+.+++ .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~~~~---~ 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIYDYL---R 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH---H
Confidence 99874321 16678999999999999999 88998653221 111211 1
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.+.... . +......+.+++.+||+.||++|||+.||++.|+++
T Consensus 230 -~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 -HGNRLK-----Q----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -cCCCCC-----C----CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111110 1 111223456666699999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=279.97 Aligned_cols=218 Identities=25% Similarity=0.396 Sum_probs=170.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|...+ +..||+|.++.... ..+.+.+|++++++++|+|+ ..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457777899999999999998533 47899999975433 34679999999999999998 456
Q ss_pred EEEeecCCCCHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 341 LVYKYMSNGTLYSLLHSNG------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
+||||+++|+|.+++...+ ...+++.++..++.|++.|++|||+ .+++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence 9999999999999997543 2357899999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+++... ..++.++||||||+++|||++ |+.||...... .....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-----~~~~~ 236 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-----EVIEC 236 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH
Confidence 999999886321 116778999999999999999 99998753221 11111
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
. ..+..... ....+.. +.+++.+||+.||++||++.||++.|+
T Consensus 237 ~----~~~~~~~~------~~~~~~~---~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 I----TQGRLLQR------PRTCPSE---VYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred H----HcCCcCCC------CCCCCHH---HHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1 11111110 1112334 445555999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=284.76 Aligned_cols=213 Identities=18% Similarity=0.263 Sum_probs=168.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.++... ...+.+.+|+.++.+++|||| ..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46788899999999999999964 68999999986532 223568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 9999999999998765 58899999999999999999999 9999999999999999999999999999875432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ..... ...+... + ..
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~-i~~~~~~------~-p~ 236 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--------RIYEK-ILAGRLK------F-PN 236 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--------HHHHH-HhcCCcC------C-CC
Confidence 1678999999999999999999999753221 11111 1111110 0 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 516 (538)
..+..+.++++ +||+.||.+||+ +.+++..
T Consensus 237 ~~~~~~~~li~---~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 WFDGRARDLVK---GLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCHHHHHHHH---HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 12344555555 999999999997 6777643
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=280.60 Aligned_cols=224 Identities=25% Similarity=0.407 Sum_probs=173.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-CC--EEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-GS--MLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv 342 (538)
++|+..+.||+|+||.||+|...+ +. .+++|.++... ...+.+.+|++++.++ +|||| ..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468888999999999999998643 33 57888887422 2345788999999999 79999 24699
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
+||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence 99999999999997532 1258899999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccC----------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHH
Q 040267 409 RIMDFGFSRLTN----------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 409 kl~Dfg~a~~~~----------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
||+|||++.... ..++.++|||||||++|||++ |..||...... .....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~--------~~~~~ 230 (297)
T cd05089 159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA--------ELYEK 230 (297)
T ss_pred EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHH
Confidence 999999875321 015789999999999999998 99999753221 11111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
... +. .... ....+.. +.+++.+||+.+|.+|||++++++.|+++.+..
T Consensus 231 ~~~-~~-----~~~~-~~~~~~~---~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 231 LPQ-GY-----RMEK-PRNCDDE---VYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred Hhc-CC-----CCCC-CCCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111 10 0001 1112233 445555999999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=258.37 Aligned_cols=216 Identities=22% Similarity=0.288 Sum_probs=177.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
-++|+.++.||+|.||.||.|+. +++..||+|++.++. ....++.+|+++-+.++|||| ..||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 45788999999999999999994 468899999997643 345789999999999999999 45799
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||.++|++...|..+....++......++.|+|.||.|+|. ++|+||||||+|+|++.++..|++|||-+.....
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN 177 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence 999999999999997766689999999999999999999999 9999999999999999999999999998865422
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
..+.++|+|++|++.||++.|.+||+.....+.+ +. +.. .++.+|
T Consensus 178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY--------kr-I~k---~~~~~p--- 242 (281)
T KOG0580|consen 178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY--------KR-IRK---VDLKFP--- 242 (281)
T ss_pred CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH--------HH-HHH---ccccCC---
Confidence 1778999999999999999999999865432211 11 111 111122
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.++.+++. +|+..+|.+|.+..||++.
T Consensus 243 -~~is~~a~dlI~---~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 -STISGGAADLIS---RLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -cccChhHHHHHH---HHhccCccccccHHHHhhh
Confidence 234456666666 9999999999999998764
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=284.83 Aligned_cols=165 Identities=22% Similarity=0.323 Sum_probs=144.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|+..+.||+|+||.||++... ++..||+|.+.... ...+++.+|++++++++|||| ..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 357888899999999999999954 68899999987532 234679999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
|+++|+|.+++.... .+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLRE---KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhh---cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 999999999998755 58999999999999999999998 4 599999999999999999999999999864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
.++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 167899999999999999999999974
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=280.78 Aligned_cols=223 Identities=24% Similarity=0.357 Sum_probs=173.2
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEcccccc--cHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACKL--GEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
..++|+..+.||+|+||.||++...+ ...+|+|.+..... ...++.+|++++.++ +|+||
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 34567888999999999999998532 36899999875332 235688999999999 79999
Q ss_pred cccEEEeecCCCCHHHHhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSN--------------GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
..+++|||+++|+|.++++.. ....+++..+++++.|++.||+|||+ .+|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEc
Confidence 346899999999999999652 12468999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccc
Q 040267 404 EDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKG 457 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 457 (538)
+++.+||+|||+++.... .++.++|||||||++||+++ |..||......+
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---- 242 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---- 242 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH----
Confidence 999999999999864321 16678999999999999998 999987532211
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
+ . .....+.. ...+......+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 243 -~---~-~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 -L---F-KLLKEGYR---------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -H---H-HHHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1 1 11111110 0111112234556666999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=284.75 Aligned_cols=206 Identities=21% Similarity=0.269 Sum_probs=162.8
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
+.||+|+||.||++.. .+|+.||+|.++... ....++.+|++++++++|||| ..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 568999999997532 223567889999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--------- 420 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--------- 420 (538)
+|.+++...+ .+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 81 ELFFHLSRER--VFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 9999998655 68999999999999999999999 999999999999999999999999999987421
Q ss_pred --------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 421 --------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 421 --------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
..++.++|||||||++|||++|+.||...... .+. .. ...+.. .+. ...+
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~---~~-~~~~~~------~~p-~~~~ 219 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLF---EL-ILMEEI------RFP-RTLS 219 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-----HHH---HH-HHcCCC------CCC-CCCC
Confidence 01678999999999999999999999753221 111 11 111111 111 1223
Q ss_pred HHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 487 DEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
.++.++++ +|++.||++|| ++.++++
T Consensus 220 ~~~~~li~---~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 220 PEAKSLLA---GLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHH---HHccCCHHHcCCCCCCCHHHHHc
Confidence 45555555 99999999999 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=277.61 Aligned_cols=219 Identities=19% Similarity=0.286 Sum_probs=171.6
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc----------------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE---------------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~---------------- 338 (538)
.+++.|+..+.||+|+||.||+|.. .+++.||+|.+........++..|+.++.++ +|+|+.
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 3566788889999999999999995 4588999999976655567889999999999 699991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.+++|||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 3699999999999999987554568999999999999999999999 999999999999999999999999999986
Q ss_pred ccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 418 LTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 418 ~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
.... .++.++|||||||++|||++|+.||...... .... ... .
T Consensus 160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-------~~~~-~~~-~ 230 (272)
T cd06637 160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALF-LIP-R 230 (272)
T ss_pred ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-------HHHH-HHh-c
Confidence 4321 1455799999999999999999999642211 1111 000 0
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.. .........+..+.+ ++.+||+.+|.+|||+.|+++
T Consensus 231 ~~-----~~~~~~~~~~~~~~~---li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NP-----APRLKSKKWSKKFQS---FIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CC-----CCCCCCCCcCHHHHH---HHHHHcCCChhhCCCHHHHhh
Confidence 00 111111122334444 455999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=278.16 Aligned_cols=224 Identities=25% Similarity=0.361 Sum_probs=176.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC-----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD-----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~ 339 (538)
.++|...+.||+|+||.||+|...+ +..|++|.+.... ...+.+.+|+.++++++|+|+ ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4568888999999999999999655 6889999987532 224568899999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 340 PLVYKYMSNGTLYSLLHSNGN------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
++++||+++|+|.+++..... ..+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence 589999999999999976421 468999999999999999999999 99999999999999999999999999
Q ss_pred cCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHh
Q 040267 414 GFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 414 g~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
|+++.+.. .++.++||||||+++||+++ |+.||...... .+..++..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~-- 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-----EMAAYLKD-- 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHc--
Confidence 99974311 16788999999999999999 99999753221 12222211
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..... . ....+++ +.+++.+||+.||++|||+.||++.|+++.++
T Consensus 235 -~~~~~------~-~~~~~~~---~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 235 -GYRLA------Q-PINCPDE---LFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -CCCCC------C-CCcCCHH---HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 11110 0 0111233 45566699999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=280.84 Aligned_cols=224 Identities=28% Similarity=0.427 Sum_probs=172.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCC--EEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGS--MLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~--~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv 342 (538)
++|+..+.||+|+||.||+|... ++. .+|+|.++... ....++.+|++++.++ +|+|| ..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46778899999999999999954 454 46888776422 2345788999999999 89999 34699
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
+||+++|+|.++++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 99999999999997542 1357899999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccC----------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHH
Q 040267 409 RIMDFGFSRLTN----------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 409 kl~Dfg~a~~~~----------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
||+|||++.... ..++.++|||||||++|||+| |..||...... +....
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~ 235 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEK 235 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--------HHHHH
Confidence 999999985221 015789999999999999998 99999743221 11111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
. ..+. .... ....+.. +.+++.+|++.+|++||++.++++.|.++.+..
T Consensus 236 ~-~~~~-----~~~~-~~~~~~~---~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 236 L-PQGY-----RLEK-PLNCDDE---VYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred H-hcCC-----cCCC-CCCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1 1110 0000 0111223 455666999999999999999999999876654
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=278.86 Aligned_cols=219 Identities=23% Similarity=0.383 Sum_probs=168.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|+..+.||+|+||.||+|.. .++..||+|.++.... ...++.+|++++++++|||| ..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3567778999999999999984 2467899999975332 23568899999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC
Q 040267 342 VYKYMSNGTLYSLLHSNG---------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF 406 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 406 (538)
||||+++|+|.+++.... ...+++.+...++.|++.||+|||+ .+|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence 999999999999986322 1357899999999999999999999 9999999999999999999
Q ss_pred CeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHH
Q 040267 407 DARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLV 460 (538)
Q Consensus 407 ~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 460 (538)
.+||+|||+++... ..++.++||||||+++|||++ |..||...... .+.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~-----~~~ 236 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ-----EVI 236 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHH
Confidence 99999999986431 115778999999999999999 99998653211 111
Q ss_pred HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 461 NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
..+ ....... . ....+..+. +++.+|++.||++||++.+|++.|..
T Consensus 237 ~~~----~~~~~~~-----~-~~~~~~~~~---~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 237 EMV----RKRQLLP-----C-SEDCPPRMY---SLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHH----HcCCcCC-----C-CCCCCHHHH---HHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111 1111110 0 111223444 45559999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=278.87 Aligned_cols=166 Identities=23% Similarity=0.363 Sum_probs=142.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|.. .++..||+|.++... .....+.+|++++++++|||| ..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 4688889999999999999995 468899999986432 234567899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++ +|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 85 ~~~-~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 85 LDS-DLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred CCc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 975 9999887654 257899999999999999999999 9999999999999999999999999999864211
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.++.++||||+||++|||+||+.||....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 15778999999999999999999997643
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=285.72 Aligned_cols=225 Identities=20% Similarity=0.289 Sum_probs=172.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEcccccc--cHHHHHHHHHHHhcC-CCCCC------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACKL--GEKQFLLEMKQVGLL-KHPNL------------ 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~ni------------ 337 (538)
.++|...+.||+|+||.||+|.. .+++.||||.++.... ....+.+|+.++.++ +|+||
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 34688889999999999999973 3467999999975332 235688999999999 68998
Q ss_pred cccEEEeecCCCCHHHHhhcCC----------------------------------------------------------
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNG---------------------------------------------------------- 359 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 359 (538)
..+++|||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 2358999999999999986431
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC------------
Q 040267 360 -------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------------ 420 (538)
Q Consensus 360 -------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------------ 420 (538)
...+++..+.+++.|++.||+|||+ .+|+||||||+||++++++++||+|||++....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 1247888999999999999999999 999999999999999999999999999886421
Q ss_pred -------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 421 -------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 421 -------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
..++.++||||||+++|||++ |..||....... . .......+.... . ....+
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~----~~~~~~~~~~~~-----~-~~~~~ 308 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----E----FCRRLKEGTRMR-----A-PDYTT 308 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----H----HHHHHhccCCCC-----C-CCCCC
Confidence 116778999999999999997 999987532110 0 111111111100 0 11112
Q ss_pred HHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 487 DEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 309 ---~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 309 ---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2356677799999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=270.71 Aligned_cols=229 Identities=21% Similarity=0.283 Sum_probs=172.7
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccc---ccccHHHHHHHHHHHhcCCCCCC----------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSA---CKLGEKQFLLEMKQVGLLKHPNL----------------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~H~ni----------------~ 338 (538)
...|...+.||+|+||.|..+. ..+|+.||||++.. .....++..+|+++|+.++|+|| .
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3445556889999999999999 45799999999973 33445788999999999999999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+|+|+|+. +|.+.++.+. .++......++.|+++||.|+|+ .+|+||||||+|+|++.+...||+|||+|+.
T Consensus 101 vYiV~elMet-DL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 101 VYLVFELMET-DLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eEEehhHHhh-HHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceee
Confidence 4799999954 9999998765 58999999999999999999999 9999999999999999999999999999998
Q ss_pred cCC----C----------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccccccc------HHHHHHHH
Q 040267 419 TNG----D----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGN------LVNWIDQL 466 (538)
Q Consensus 419 ~~~----~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~------~~~~~~~~ 466 (538)
... . ||.+.||||.||++.||++|++-|.+.......... ..+.....
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~ 254 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQK 254 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHH
Confidence 742 1 899999999999999999999999865432211000 00000000
Q ss_pred hccCCcccccccc--ccC-------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 467 SSSGRIKDVIDKA--LTG-------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 467 ~~~~~~~~~~d~~--l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.+......+... ... ......+.++++ +++..||.+|+|++|.++.
T Consensus 255 i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLle---kmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 255 IRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLE---KMLVFDPKKRITAEEALAH 310 (359)
T ss_pred hccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHH---HHhccCccccCCHHHHhcC
Confidence 1111111111100 000 122345566666 9999999999999999874
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=273.43 Aligned_cols=213 Identities=23% Similarity=0.356 Sum_probs=168.1
Q ss_pred CeEeecCCceEEEEEeC-C---CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLL-D---GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~---~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++||+|+||.||+|+.. . +..+|+|.+..... ..+++.+|+++++++.|+|+ ..++||||+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 46999999999999842 2 26899999976443 45678999999999999999 345899999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 81 PLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 9999998765 68999999999999999999999 9999999999999999999999999999874311
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++ |+.||..... ..+..++. ...... ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~~----~~~~~~------~~ 220 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAMLE----SGERLP------RP 220 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHH----cCCcCC------CC
Confidence 15668999999999999998 9999975321 11222221 111000 11
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
...+ ..+.+++.+|++.+|++||++.++++.|+++.
T Consensus 221 ~~~~---~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 221 EECP---QEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCC---HHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 1122 33455666999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=284.33 Aligned_cols=163 Identities=23% Similarity=0.389 Sum_probs=140.6
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------cc
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE----------------KP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~----------------~~ 340 (538)
+|+..+.||+|+||.||+|.. .++..||||+++... ....++.+|++++++++||||. .+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 367778999999999999994 468999999986421 2335688999999999999982 37
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+. ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999996 69999987655 58999999999999999999999 999999999999999999999999999987421
Q ss_pred ----------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 421 ----------------------------GDASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 421 ----------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
..++.++|||||||++|||+||+.||...
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 11567899999999999999999999754
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=272.71 Aligned_cols=212 Identities=19% Similarity=0.274 Sum_probs=164.8
Q ss_pred eEeecCCceEEEEEeC---CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCCCH
Q 040267 287 VLVSTWTGTTYKAMLL---DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~gsL 351 (538)
.||+|+||.||+|... ++..||+|.+.... ...+++.+|+.++++++|+|| ..++||||+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 3899999999999753 35579999987543 224568999999999999999 34699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.... ..+++.++++++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 82 NKFLSGKK-DEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99997543 368999999999999999999999 9999999999999999999999999998863211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++||+++ |+.||...... .+.. ....+.... . ...
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~-~~~~~~~~~-----~-~~~ 222 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMS-FIEQGKRLD-----C-PAE 222 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHH-HHHCCCCCC-----C-CCC
Confidence 15668999999999999996 99999753221 1111 111111100 0 111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.++++.+ ++.+||+.+|++||++.+|.+.|+.+
T Consensus 223 ~~~~l~~---li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYA---LMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHH---HHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 2334444 55599999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=271.31 Aligned_cols=211 Identities=21% Similarity=0.325 Sum_probs=172.1
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.|+..+.||+|.||.|-+|. ...|+.||||.++++. .+.-.+++||++|+.++|||| ...||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 45666789999999999998 5789999999998654 223458899999999999999 2349999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|..+|.|++|+.+.+ .+++.+...+++||..|+.|+|. ++++|||||.+|||+|+|+++||+|||++.++...
T Consensus 134 YaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf 208 (668)
T KOG0611|consen 134 YASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF 208 (668)
T ss_pred ecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhccccH
Confidence 999999999999887 69999999999999999999999 99999999999999999999999999999865432
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
-.+.+|-||+||+||-|+.|..||++.. ....+++ +..|.+.+
T Consensus 209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D--------hk~lvrQ-Is~GaYrE------- 272 (668)
T KOG0611|consen 209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD--------HKRLVRQ-ISRGAYRE------- 272 (668)
T ss_pred HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch--------HHHHHHH-hhcccccC-------
Confidence 4578999999999999999999998632 1222222 22232221
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+..+.-+++ +++..+|++|.|+.+|...
T Consensus 273 -P~~PSdA~gLIR---wmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 273 -PETPSDASGLIR---WMLMVNPERRATIEDIASH 303 (668)
T ss_pred -CCCCchHHHHHH---HHHhcCcccchhHHHHhhh
Confidence 112234444555 9999999999999998764
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=278.02 Aligned_cols=166 Identities=22% Similarity=0.332 Sum_probs=141.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||.||+|... +++.||+|.++... .....+.+|+.+++.++|||| ..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467889999999999999999954 68999999987532 223467889999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|++ ++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 158 (303)
T cd07869 84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH 158 (303)
T ss_pred CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence 996 58888887543 358899999999999999999999 9999999999999999999999999998863210
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++||||+||++|||++|+.||...
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1567889999999999999999999753
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=279.92 Aligned_cols=204 Identities=18% Similarity=0.251 Sum_probs=160.1
Q ss_pred EeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 288 LVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 288 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
||+|+||.||+|... +++.||+|.++... .....+.+|+.++.+++|||| ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 689999999999954 58899999986422 233567889999999999999 34699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 155 (312)
T cd05585 81 FHHLQREG--RFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG 155 (312)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence 99998755 58999999999999999999999 9999999999999999999999999999874211
Q ss_pred -------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 488 (538)
.++.++|||||||++|||++|+.||..... ......... +.. .+ ....+.+
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--------~~~~~~~~~-~~~------~~-~~~~~~~ 219 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--------NEMYRKILQ-EPL------RF-PDGFDRD 219 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--------HHHHHHHHc-CCC------CC-CCcCCHH
Confidence 167889999999999999999999975322 122222111 110 01 1122345
Q ss_pred HHHHHHHHhHccCCCCCCCCC---HHHHHH
Q 040267 489 ILQFLQIACKCVAVRPKEKWS---MYQVYI 515 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs---~~evl~ 515 (538)
+.+++. +||+.||++||+ +.|++.
T Consensus 220 ~~~li~---~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 220 AKDLLI---GLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHH---HHcCCCHHHcCCCCCHHHHHc
Confidence 555555 999999999985 556554
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=273.02 Aligned_cols=217 Identities=23% Similarity=0.362 Sum_probs=172.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++|...+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++|||+ ..+++|||+++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence 3578889999999999999975 67889999986532 34678999999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (254)
T cd05083 84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP 160 (254)
T ss_pred CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence 99999987655568999999999999999999999 9999999999999999999999999998874321
Q ss_pred ------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHH
Q 040267 422 ------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488 (538)
Q Consensus 422 ------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 488 (538)
.++.++||||||+++|||++ |+.||..... .+.... ...+... + . ....++.
T Consensus 161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~-~~~~~~~---~--~-~~~~~~~ 225 (254)
T cd05083 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--------KEVKEC-VEKGYRM---E--P-PEGCPAD 225 (254)
T ss_pred ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHH-HhCCCCC---C--C-CCcCCHH
Confidence 26678999999999999998 9999975322 111111 1111100 0 0 0112233
Q ss_pred HHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
+.+++.+||+.+|++||++.++++.|++
T Consensus 226 ---~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 226 ---VYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---HHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 4455559999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=278.47 Aligned_cols=229 Identities=18% Similarity=0.254 Sum_probs=163.7
Q ss_pred CCCCCCeEeecCCceEEEEEe-C-CCCEEEEEEccccc---ccHHHHHHHHHHHhcC---CCCCCc--------------
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-L-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLL---KHPNLE-------------- 338 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~H~ni~-------------- 338 (538)
+|...+.||+|+||.||+|.. . +++.||+|.++... .....+.+|+.+++.+ +||||.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 688889999999999999985 3 46889999986432 2234566787777665 699992
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++||||++ ++|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 358999997 599999987654568999999999999999999999 99999999999999999999999999998
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc-
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK- 473 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 473 (538)
+.... .++.++|||||||++|||++|+.||......+... .+..... ......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~-~i~~~~~-~~~~~~~~~ 235 (290)
T cd07862 158 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG-KILDVIG-LPGEEDWPR 235 (290)
T ss_pred EeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHH-HHHHHhC-CCChhhchh
Confidence 74321 16778999999999999999999998643321110 1111000 00000000
Q ss_pred ------ccccccccC---CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 ------DVIDKALTG---KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ------~~~d~~l~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.... ...+.....+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000000 000011122345566999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=276.67 Aligned_cols=221 Identities=22% Similarity=0.355 Sum_probs=170.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------c
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------E 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~ 338 (538)
.+++|+..+.||+|+||.||+|... ++..||+|.+.... ....++.+|+.+++.++|||| .
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567899999999999999999742 24679999986432 234568899999999999999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 339 KPLVYKYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence 469999999999999997532 1246888999999999999999999 99999999999999999999999
Q ss_pred EeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHH
Q 040267 411 MDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWID 464 (538)
Q Consensus 411 ~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 464 (538)
+|||+++... ..++.++|||||||++|||++ |..||...... .....+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~~~~~~- 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----QVLRFV- 234 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHH-
Confidence 9999886321 116778999999999999999 78898753221 111111
Q ss_pred HHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 465 QLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 465 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
. ....... ....++. +.+++.+|++.+|++|||+.|+++.|++
T Consensus 235 --~-~~~~~~~------~~~~~~~---~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 --M-EGGLLDK------PDNCPDM---LFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred --H-cCCcCCC------CCCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1 1111110 1112233 4555559999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=269.73 Aligned_cols=224 Identities=16% Similarity=0.265 Sum_probs=173.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+. .+++.||||.++... .....+.+|+++++.++|||+ ..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4788899999999999999994 478999999875422 223568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 22358899999999999999999999 9999999999999999999999999998764321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
..+.++||||||+++|||++|+.||..... ....+...... .. .+
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~-~~-----~~ 226 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLFSLCQKIEQ-CD-----YP 226 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc------cHHHHHHHHhc-CC-----CC
Confidence 156789999999999999999999864221 11222222111 11 11
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.. ........+.+++.+||+.+|++||++.||++.+++++
T Consensus 227 ~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 227 PL---PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CC---ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 11 11122234555566999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=270.84 Aligned_cols=215 Identities=23% Similarity=0.338 Sum_probs=170.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc---cccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||+|++|.||+|.. .++..|++|.+... ....+++.+|++++++++|||+ ..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 467778999999999999995 46899999998643 2345678899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++.......+++..+.+++.|++.||.|||+ .+++|+||||+||++++++.+||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 999999999987644579999999999999999999999 9999999999999999999999999998775322
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||++++||++|+.||...... .. .... ..+.... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~---~~~~-~~~~~~~-----~-- 221 (256)
T cd08529 158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----AL---ILKI-IRGVFPP-----V-- 221 (256)
T ss_pred hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HH---HHHH-HcCCCCC-----C--
Confidence 1567899999999999999999999753311 11 1111 1111111 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.......+.+++.+||+.+|++||++.++++.
T Consensus 222 --~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 222 --SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11122334555559999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=271.39 Aligned_cols=224 Identities=19% Similarity=0.323 Sum_probs=173.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|++|.||+|.. .++..+|||.+.... ....++.+|+++++.++|+|| ..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677888999999999999994 578999999886422 223578899999999999999 346999
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||+++++|.+++... ....+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998742 22468999999999999999999999 9999999999999999999999999998764321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++|||++|..||..... ....+..... ....+
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~------~~~~~ 226 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIE------QCDYP 226 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc------hHHHHhhhhh------cCCCC
Confidence 156789999999999999999999964221 1111111111 11111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.......+.++.. ++.+||+.+|++||||.+|++.++++.
T Consensus 227 ~~~~~~~~~~~~~---li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 227 PLPSDHYSEELRQ---LVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCcccccHHHHH---HHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111223334444 445999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=280.39 Aligned_cols=224 Identities=23% Similarity=0.333 Sum_probs=173.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
++|...+.||+|+||.||++... +...+|+|.++... ....++.+|++++.++ +|||+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46888899999999999999742 23579999997542 2335688899999999 79998
Q ss_pred cccEEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
..++||||+++|+|.+++..... ..+++.++++++.|++.||+|||+ .+++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence 34699999999999999976421 358999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccc
Q 040267 404 EDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKG 457 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 457 (538)
+++.+||+|||.++.... .++.++|||||||++|||++ |+.||.....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~------ 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------ 248 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH------
Confidence 999999999999863211 16778999999999999998 8888864322
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
...... ...+...+ . ....+.+ +.+++.+|++.+|++||||.||++.|+++.+..
T Consensus 249 --~~~~~~-~~~~~~~~-----~-~~~~~~~---~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 249 --EELFKL-LKEGHRMD-----K-PSNCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred --HHHHHH-HHcCCCCC-----C-CCcCCHH---HHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 111111 11111000 0 1112233 445555999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=279.03 Aligned_cols=221 Identities=20% Similarity=0.317 Sum_probs=171.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~~ 339 (538)
++|...+.||+|+||.||++.. .++..||+|.++... ...+.+.+|+++++++ +|+|| ..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 4688899999999999999973 124579999987543 2235689999999999 79999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
+++|||+++|+|.++++......+++.++..++.|++.||+|||+ .+|+|+||||+||++++++.+|++|||+++..
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 699999999999999986544458999999999999999999999 99999999999999999999999999998743
Q ss_pred CC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. .++.++|||||||++|||++ |..||......+ ..... ...+..
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~----~~~~~----~~~~~~- 262 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS----KFYKL----IKEGYR- 262 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH----HHHHH----HHcCCc-
Confidence 21 14678999999999999998 999987533211 11111 111100
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.. .....+.+ +.+++.+|++.+|++|||+.|+++.|+++
T Consensus 263 ----~~-~~~~~~~~---~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 ----MA-QPEHAPAE---IYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----CC-CCCCCCHH---HHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00 01112334 44455599999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=276.21 Aligned_cols=219 Identities=21% Similarity=0.327 Sum_probs=169.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.++|...+.||+|++|.||+|... .+..||+|.+.... .....+.+|+.++++++|+|| ..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 456888899999999999999964 35689999886433 234568999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---CeEEE
Q 040267 340 PLVYKYMSNGTLYSLLHSNGN-----TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DARIM 411 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 411 (538)
++||||+++|+|.+++..... ..+++..+.+++.||+.||+|||+ .+++||||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEec
Confidence 689999999999999976531 358999999999999999999999 8999999999999998654 59999
Q ss_pred eccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHH
Q 040267 412 DFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 412 Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
|||+++... ..++.++|||||||++|||++ |+.||...... +....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~~~~~ 233 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------EVMEF 233 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHH
Confidence 999987431 116789999999999999997 99999753321 11111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
....... ..+......+.+++.+|++.+|++|||+.+|++.|+
T Consensus 234 ~~~~~~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTGGGRL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHcCCcC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111111 011111233455556999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=269.72 Aligned_cols=224 Identities=18% Similarity=0.313 Sum_probs=174.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|++|.||+|... +|+.||+|.++... ...+.+.+|++++++++|+|+ ..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999965 79999999886321 224678999999999999998 346899
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||+++|+|.+++... ....+++.++..++.+++.||+|||+ .+|+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998653 23458999999999999999999999 9999999999999999999999999998764321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++|||++|+.||..... ...+...... .+....
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~~~---- 227 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIE-KCDYPP---- 227 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc------cHHHHHhhhh-cCCCCC----
Confidence 156789999999999999999999964321 1222221111 111111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.. .......+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 228 -~~---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 -LP---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -CC---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11 1112233455556999999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=273.45 Aligned_cols=218 Identities=23% Similarity=0.380 Sum_probs=170.5
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CC---CEEEEEEcccc--cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DG---SMLAIKRLSAC--KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
+|...+.||+|+||.||+|... ++ ..||+|.++.. ....++|..|+.++++++|||| ..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4667789999999999999954 33 36999998753 2234679999999999999999 346899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999997654 368999999999999999999999 9999999999999999999999999998764321
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++||||||+++||+++ |..||...... .+..++... ....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~~~---~~~~- 231 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIEQD---YRLP- 231 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcC---CcCC-
Confidence 15678999999999999887 99999753221 222222110 0000
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
...+....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 232 ---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 ---------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111223345566699999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=280.18 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=163.2
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+++++.++|||| ..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999994 468999999997532 223568889999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 81 ELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence 9999987654 68999999999999999999999 9999999999999999999999999999874211
Q ss_pred ---------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 422 ---------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 422 ---------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
.++.++|||||||++|||++|+.||...... ....... .+. ..+. ...+
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~-~~~------~~~p-~~~~ 219 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELIL-MED------IKFP-RTLS 219 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhc-cCC------ccCC-CCCC
Confidence 1678999999999999999999999753221 1111111 111 0111 1223
Q ss_pred HHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 487 DEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
.++.++++ +|++.||++|| ++.|+++.
T Consensus 220 ~~~~~li~---~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 220 ADAKSLLS---GLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHH---HHcCCCHHHcCCCCCCCHHHHhcC
Confidence 45555555 99999999997 88998864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=277.97 Aligned_cols=223 Identities=23% Similarity=0.365 Sum_probs=172.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
.++|...+.||+|+||.||+|+.. ++..||+|.++... ...+++.+|+.+++.+ +||||
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456778899999999999999731 24579999987532 2346788999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+ .+|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEE
Confidence 3469999999999999997642 1357899999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
++++.+||+|||+++.... .++.++||||||+++||+++ |..||.....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----- 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----
Confidence 9999999999999874321 15778999999999999998 7888864321
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.++.......... . .....+.. +.+++.+||+.+|++|||+.||++.|+++..
T Consensus 246 ---~~~~~~~~~~~~~-~------~~~~~~~~---~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 246 ---EELFKLLKEGHRM-D------KPANCTNE---LYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred ---HHHHHHHHcCCcC-C------CCCCCCHH---HHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 1222221111110 0 01112234 4445559999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=275.69 Aligned_cols=226 Identities=19% Similarity=0.268 Sum_probs=174.7
Q ss_pred CCCCCCeEeecCCceEEEEEeC-----CCCEEEEEEccccccc--HHHHHHHHHHHhcCCCCCC-------------ccc
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-----DGSMLAIKRLSACKLG--EKQFLLEMKQVGLLKHPNL-------------EKP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~H~ni-------------~~~ 340 (538)
+|...+.||+|+||.||+|... ++..||||.++..... .+.+.+|++++++++|+|| ..+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4666788999999999999853 3679999999865443 5779999999999999999 236
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
++|||+++++|.+++..... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||.+....
T Consensus 85 lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 99999999999999986542 59999999999999999999999 999999999999999999999999999987544
Q ss_pred C--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccc-------cccHHHHHHHHh
Q 040267 421 G--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGY-------KGNLVNWIDQLS 467 (538)
Q Consensus 421 ~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~~ 467 (538)
. .++.++||||||+++|||+||+.|+......... ......+... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL-L 239 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH-H
Confidence 1 1566899999999999999999998653221100 0001111111 1
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.... ...........+.+++.+|++.+|++||||.||+++|+++
T Consensus 240 ~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 240 KEGE---------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HcCC---------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1110 0011111224466677799999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=272.01 Aligned_cols=219 Identities=23% Similarity=0.365 Sum_probs=170.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-C---CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-D---GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||.||+|... + +..+|+|.++... ...+.+.+|+.++.+++|||| ..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778899999999999999853 2 3379999987533 224578999999999999999 34689
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++.++.+++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999998654 358999999999999999999999 9999999999999999999999999998864321
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++||+++ |+.||...... .....+. .+.
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-----~~~~~~~----~~~---- 226 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-----DVIKAIE----EGY---- 226 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-----HHHHHHh----CCC----
Confidence 15778999999999999887 99999753221 1111111 110
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.... ....+ ..+.+++.+|++.+|.+||+|.++++.|+++
T Consensus 227 -~~~~-~~~~~---~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 -RLPA-PMDCP---AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -cCCC-CCCCC---HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0000 01112 2345566699999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=268.84 Aligned_cols=211 Identities=22% Similarity=0.340 Sum_probs=166.1
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHH
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLY 352 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~ 352 (538)
++||+|+||.||+|...++..+|+|.++... .....+.+|++++++++|||+ ..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3689999999999998889999999987533 223568899999999999999 346999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----------
Q 040267 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----------- 421 (538)
Q Consensus 353 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----------- 421 (538)
+++.... ..+++..+..++.|++.||.|+|+ .+++||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 9987644 358999999999999999999999 9999999999999999999999999998863211
Q ss_pred -------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDD 487 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 487 (538)
.++.++||||||+++||+++ |..||...... ... .....+... .....
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~~~----~~~~~~~~~---------~~~~~ 218 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----QAR----EQVEKGYRM---------SCPQK 218 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----HHH----HHHHcCCCC---------CCCCC
Confidence 15678999999999999998 99999753221 111 111111100 00111
Q ss_pred HHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 488 EILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 488 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
....+.+++.+|++.+|++||++.|++++|.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 2234555666999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=277.66 Aligned_cols=215 Identities=17% Similarity=0.234 Sum_probs=164.4
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
++||+|+||.||+|.. .+++.||+|.++... ...+.+..|..++.++ +|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999995 468899999997532 2234578899999998 69999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 81 GDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence 99999987654 69999999999999999999999 999999999999999999999999999986421
Q ss_pred ---------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 421 ---------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
..++.++|||||||++|||+||+.||......+........+.......+... + ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-p~~~ 228 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR------I-PRSL 228 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC------C-CCCC
Confidence 01677999999999999999999999743322221222333333333222111 1 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCC------HHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWS------MYQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs------~~evl~ 515 (538)
+.++.++++ +|++.||.+||+ ++++++
T Consensus 229 ~~~~~~li~---~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 229 SVKASSVLK---GFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CHHHHHHHH---HHhccCHHHcCCCCCCCCHHHHhc
Confidence 334455555 999999999997 567654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=277.45 Aligned_cols=210 Identities=18% Similarity=0.251 Sum_probs=159.9
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.++.++ +|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999995 468899999997532 2234577899888777 79999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 81 GDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence 99999887654 58999999999999999999999 999999999999999999999999999986421
Q ss_pred ---------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 421 ---------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
..++.++|||||||++|||++|+.||...............++.......... +. ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------~p-~~~ 228 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------IP-RSL 228 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC------CC-CCC
Confidence 01677999999999999999999999643222222222333333332222111 11 112
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
+..+..+++ +|++.||++||++
T Consensus 229 ~~~~~~ll~---~~L~~dP~~R~~~ 250 (329)
T cd05618 229 SVKAASVLK---SFLNKDPKERLGC 250 (329)
T ss_pred CHHHHHHHH---HHhcCCHHHcCCC
Confidence 334444444 9999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-33 Score=293.32 Aligned_cols=219 Identities=21% Similarity=0.250 Sum_probs=172.0
Q ss_pred HHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc--------------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------- 338 (538)
...++|...+.||+|+||+||+|. ..+++.||||.+.... .....+.+|+..+..++|+|++
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 345689999999999999999998 4579999999986533 2235678899999999999982
Q ss_pred -----ccEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -----KPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -----~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++||||+++|+|.++++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEE
Confidence 358999999999999997532 3468999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 412 DFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 412 Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
|||+++.... .++.++|||||||++|||++|+.||..... ...+...
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--------~~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--------EEVMHKT 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHH
Confidence 9999864321 167899999999999999999999975322 2222222
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. +.... + ....+.++..+++ +||+.||++||++.++++.
T Consensus 258 ~~-~~~~~-----~-~~~~~~~l~~li~---~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LA-GRYDP-----L-PPSISPEMQEIVT---ALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hc-CCCCC-----C-CCCCCHHHHHHHH---HHcccChhhCcCHHHHHhC
Confidence 11 11111 1 1122334444444 9999999999999999864
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=272.89 Aligned_cols=218 Identities=19% Similarity=0.249 Sum_probs=167.5
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
+|+..++||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++++++|||| ..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 467778999999999999995 468999999986432 123457789999999999999 3569999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 9999999998876544469999999999999999999999 9999999999999999999999999998875321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++|+.||....... ....+........ ....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~------~~~~- 225 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-----KREEVERRVKEDQ------EEYS- 225 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-----HHHHHHHHhhhcc------cccC-
Confidence 15678999999999999999999998532211 1111111111110 0000
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
...+..+. +++.+|++.||++|| ++.++++.
T Consensus 226 ~~~~~~~~---~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 226 EKFSEAAR---SICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCHHHH---HHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 11223444 455599999999999 78888653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=280.53 Aligned_cols=206 Identities=21% Similarity=0.270 Sum_probs=162.1
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
+.||+|+||.||++.. .+|..||+|.++... .....+.+|+++++.++|||| ..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999994 568999999997532 223457789999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--------- 420 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--------- 420 (538)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 81 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence 9999987655 68999999999999999999999 999999999999999999999999999876421
Q ss_pred --------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 421 --------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 421 --------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
..++.++|||||||++|||++|+.||......+ ...... .+.. .+. ...+
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--------~~~~~~-~~~~------~~p-~~~~ 219 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--------LFELIL-MEEI------RFP-RTLS 219 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH--------HHHHHh-cCCC------CCC-CCCC
Confidence 016788999999999999999999997532211 111111 1110 111 1223
Q ss_pred HHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 487 DEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
.++.++++ +|++.||++|| ++.++++
T Consensus 220 ~~~~~li~---~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 220 PEAKSLLA---GLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHH---HHccCCHHHhCCCCCCCHHHHHc
Confidence 45555555 99999999998 8888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=261.60 Aligned_cols=204 Identities=22% Similarity=0.343 Sum_probs=165.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+....||.|+||.|..++. .+|.-+|+|++++... ..+...+|..+|+.+.||.+ ..||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4677788999999999999995 4688999999986432 23557889999999999999 446999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||++||.|+.++++.+ ++++..+..++.+|+.||+|||+ ..|++|||||+|||+|.+|.+||+|||+|+...+.
T Consensus 124 eyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred eccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 9999999999999887 69999999999999999999999 99999999999999999999999999999965532
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
+..++|.|||||++|||+.|.+||...+....+. + +.++++. -+.
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~--------K-I~~~~v~-------fP~ 262 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYE--------K-ILEGKVK-------FPS 262 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHH--------H-HHhCccc-------CCc
Confidence 7889999999999999999999998755422211 1 1111111 112
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCC
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEK 507 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~R 507 (538)
+.+.+++++++ ..++.|-.+|
T Consensus 263 ~fs~~~kdLl~---~LL~vD~t~R 283 (355)
T KOG0616|consen 263 YFSSDAKDLLK---KLLQVDLTKR 283 (355)
T ss_pred ccCHHHHHHHH---HHHhhhhHhh
Confidence 33445666665 7777777777
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=285.99 Aligned_cols=212 Identities=22% Similarity=0.377 Sum_probs=159.3
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+|+..+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|+++++.++|+|| ..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 344567899999999999995 468999999986432 224678899999999999999 345899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+.. ..++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 225 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPC 225 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccccccc
Confidence 999986532 35677888999999999999999 99999999999999999999999999998743210
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.+.++|||||||++|||++|+.||...... ............ . .+
T Consensus 226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~-~-----~~ 294 (353)
T PLN00034 226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-----DWASLMCAICMS-Q-----PP 294 (353)
T ss_pred cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhcc-C-----CC
Confidence 234799999999999999999999732211 111111111000 0 00
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. .....+.++.+ ++.+||+.||++|||+.|+++.
T Consensus 295 ~-~~~~~~~~l~~---li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 E-APATASREFRH---FISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred C-CCCccCHHHHH---HHHHHccCChhhCcCHHHHhcC
Confidence 0 01122334444 4459999999999999999874
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=276.43 Aligned_cols=213 Identities=21% Similarity=0.315 Sum_probs=173.9
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
-|+..+.||+|.||.||+|. ..+++.||+|++.-.. ...+++..|+.+|..++++|| ..+++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 46666889999999999999 5578999999997533 334678999999999999999 234899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
.+|++.+.++... .+++....-|++++..||.|||. .+.+|||||+.|||+..+|.+|++|||.+.....
T Consensus 94 ~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred cCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 9999999998776 45888888999999999999999 9999999999999999999999999999975443
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.|+.|+||||+|++.+||++|.+|+........ + --+.+-..|.+.+
T Consensus 169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-----------l---flIpk~~PP~L~~- 233 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-----------L---FLIPKSAPPRLDG- 233 (467)
T ss_pred ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-----------E---EeccCCCCCcccc-
Confidence 289999999999999999999999985332100 0 0112222344444
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+..+++|+. .|++.||+.|||+.++++.
T Consensus 234 ~~S~~~kEFV~---~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 DFSPPFKEFVE---ACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccCHHHHHHHH---HHhhcCcccCcCHHHHhhh
Confidence 44556777777 9999999999999999873
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=276.91 Aligned_cols=223 Identities=23% Similarity=0.374 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCC----EEEEEEcccccc--cHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGS----MLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|.. .++. .||+|.+..... ...++.+|+.+++.++||||. .+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 4577788999999999999985 3454 579998875332 234688999999999999993 3489
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++....
T Consensus 87 ~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccCc
Confidence 99999999999997654 258999999999999999999999 9999999999999999999999999999974321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++||+++ |+.||...... ....++ ..+....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~-----~~~~~~----~~~~~~~-- 231 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR-----EIPDLL----EKGERLP-- 231 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH----HCCCCCC--
Confidence 15678999999999999998 89999753211 122222 1111000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.......++.+++..||..+|++||++.++++.|.++.+..
T Consensus 232 -------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 232 -------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 01112234566677999999999999999999999986543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=269.48 Aligned_cols=216 Identities=22% Similarity=0.402 Sum_probs=172.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
.+|+..+.||+|+||.||+|...++..+|+|.++.......++.+|++++++++|||+ ..++|+||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 3567778999999999999997778899999998666666789999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... ..+++..+..++.+++.|++|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 84 GCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999997643 258999999999999999999999 8999999999999999999999999998763211
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++ |+.||..... ......... + .....+ .
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~-~--~~~~~~----~ 224 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETINA-G--FRLYKP----R 224 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHhC-C--CCCCCC----C
Confidence 15668999999999999998 9999974321 111211111 1 011111 1
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
..+ ..+.+++.+||+.+|++|||+.||++.|
T Consensus 225 ~~~---~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 LAS---QSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCC---HHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 122 3355566699999999999999999887
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=276.58 Aligned_cols=212 Identities=19% Similarity=0.298 Sum_probs=175.5
Q ss_pred HHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
...++|+..+.||+|+||.||.|+ ..+|..+|+|+++++.. ..+..+.|-.+|....+|.| ..|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 366789999999999999999999 55699999999987542 23557889999999999999 457
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||||++||++..+|...+ .|++..+..++.+++-|++.+|+ .|+|||||||+|+|||..|++||+|||++.-+.
T Consensus 218 LiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999999999877 79999999999999999999999 999999999999999999999999999986211
Q ss_pred C-------------------------------C---------------------------------------CCCccCcc
Q 040267 421 G-------------------------------D---------------------------------------ASLQKDVH 430 (538)
Q Consensus 421 ~-------------------------------~---------------------------------------~~~~~DV~ 430 (538)
. . |+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 0 0 78889999
Q ss_pred cHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 040267 431 GFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWS 509 (538)
Q Consensus 431 S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 509 (538)
|+|||+|||+.|.+||......+.+ ..+..|...+..... ...++++++++. +|+. ||++|--
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~-rkI~nwr~~l~fP~~-----------~~~s~eA~DLI~---rll~-d~~~RLG 435 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETY-RKIVNWRETLKFPEE-----------VDLSDEAKDLIT---RLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhhhccCCCc-----------CcccHHHHHHHH---HHhc-CHHHhcC
Confidence 9999999999999999987665443 356667654433221 122356776666 8888 9999975
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=279.16 Aligned_cols=213 Identities=19% Similarity=0.246 Sum_probs=168.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC--CCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD--GSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||.||+|...+ +..||+|.+.... ...+.+.+|+++++.++|||| ..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468888999999999999998533 3689999986432 234568899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 99999999999998765 58999999999999999999999 9999999999999999999999999999975432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++|+.||....... .......+.. .+ .
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---------~~~~i~~~~~------~~-p 248 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL---------IYQKILEGII------YF-P 248 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH---------HHHHHhcCCC------CC-C
Confidence 16778999999999999999999997532211 1111111111 01 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
...+..+..+++ +|++.||++|+ +++|+++.
T Consensus 249 ~~~~~~~~~li~---~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 249 KFLDNNCKHLMK---KLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCHHHHHHHH---HHcccCHHHcCCCCCCCHHHHHcC
Confidence 123345555555 99999999995 88888764
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=279.45 Aligned_cols=167 Identities=22% Similarity=0.342 Sum_probs=144.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|+..+.||+|+||.||++... ++..+|+|.++... ....++.+|++++++++|+|| ..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367889999999999999999964 68899999886532 224568999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++|+|.+++...+ .+++.....++.+++.||+|||+ ..+|+|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~ 159 (333)
T cd06650 84 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159 (333)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc
Confidence 999999999998755 58899999999999999999997 13699999999999999999999999999864321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 1678899999999999999999999753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=285.95 Aligned_cols=224 Identities=23% Similarity=0.303 Sum_probs=170.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEcccccc--cHHHHHHHHHHHhcCC-CCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLK-HPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-H~ni----------- 337 (538)
..++|...+.||+|+||.||+|++. .+..||+|+++.... ..+.+.+|++++.++. ||||
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3446777899999999999999853 245899999975432 2356889999999997 9999
Q ss_pred cccEEEeecCCCCHHHHhhcCCC---------------------------------------------------------
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGN--------------------------------------------------------- 360 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 360 (538)
..++|+||+++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 34699999999999999975321
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCee
Q 040267 361 ---------------------------------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401 (538)
Q Consensus 361 ---------------------------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 401 (538)
..+++....+++.|++.||+|||+ .+|+||||||+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEE
Confidence 246788889999999999999999 99999999999999
Q ss_pred eCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccc
Q 040267 402 VDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGY 455 (538)
Q Consensus 402 l~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~ 455 (538)
+++++.+||+|||+++.... .++.++||||||+++|||++ |..||......+
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~-- 349 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE-- 349 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH--
Confidence 99999999999999874310 15678999999999999998 889986432211
Q ss_pred cccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 456 KGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
........+.. ... ....+.++.+ ++.+||+.+|.+||+++||++.|+++.
T Consensus 350 ------~~~~~~~~~~~-----~~~-p~~~~~~l~~---li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 ------QFYNAIKRGYR-----MAK-PAHASDEIYE---IMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ------HHHHHHHcCCC-----CCC-CCCCCHHHHH---HHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11111111110 000 1112334444 455999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=280.43 Aligned_cols=216 Identities=18% Similarity=0.294 Sum_probs=178.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni------------~~~lv~ 343 (538)
++|...+.+|+|+||.++..+.+ ++..+++|.+.... ..++....|+.++++++|||| ..+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46778889999999999999854 57899999997543 233467899999999999999 256999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
+||+||++.+.+.+..+..+++..+.+|+.|++.|+.|||+ .+|+|||||+.||+++.+..+||+|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999999999998877789999999999999999999998 99999999999999999999999999999976543
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
|..|+||||+||++|||++-+++|...+. ...+.+.... ..++.
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~-----~~~Pl- 226 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRG-----LYSPL- 226 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhc-----cCCCC-
Confidence 88999999999999999999999986432 2222222211 11111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+...+.+++.+++ .|++.+|..||++.+++.+
T Consensus 227 -p~~ys~el~~lv~---~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 -PSMYSSELRSLVK---SMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CccccHHHHHHHH---HHhhcCCccCCCHHHHhhC
Confidence 1234456666666 9999999999999999986
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=283.42 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=169.3
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
...++|+..+.||+|+||.||+++. .++..||+|.++... ...+.+.+|+.+++.++|||| ..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3456788999999999999999995 468899999996422 223457889999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++... .++...+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999999764 37888899999999999999999 999999999999999999999999999986432
Q ss_pred C----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 421 G----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 421 ~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
. .++.++|||||||++|||++|+.||...... ............
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~ 265 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMDHKNS 265 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCc
Confidence 1 1467899999999999999999999853321 111111111100
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE--KWSMYQVYIS 516 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 516 (538)
... . .....+.++.++++ +|++.+|.+ |||+.|+++.
T Consensus 266 ~~~-~---~~~~~s~~~~~li~---~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 266 LTF-P---DDIEISKQAKDLIC---AFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCC-C---CcCCCCHHHHHHHH---HHccChhhccCCCCHHHHhcC
Confidence 000 0 01113445566665 999999988 9999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=280.20 Aligned_cols=216 Identities=18% Similarity=0.253 Sum_probs=168.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||++.. .+++.||+|.++.... ..+.+.+|+.+++.++|+|| ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688889999999999999995 4689999999975322 34568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999998753 268999999999999999999999 9999999999999999999999999999864321
Q ss_pred ----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 422 ----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 422 ----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.++.++|||||||++|||++|+.||...... .............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~~ 228 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA--------KTYNNIMNFQRFL 228 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH--------HHHHHHHcCCCcc
Confidence 1357899999999999999999999753321 1112211111111
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+ ....+..+..+++ .|++ +|++|||+.++++
T Consensus 229 ~~~~----~~~~~~~~~~li~---~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 KFPE----DPKVSSDFLDLIQ---SLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCC----CCCCCHHHHHHHH---HHcc-ChhhCCCHHHHhC
Confidence 1000 1112345555555 8997 9999999999885
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=273.55 Aligned_cols=222 Identities=19% Similarity=0.295 Sum_probs=170.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------c
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------E 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~ 338 (538)
..++|+..+.||+|+||.||+|... .+..||+|.++.... ...++.+|+.+++.++|||+ .
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567888999999999999999743 245899999864332 23468899999999999999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 339 KPLVYKYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
.++||||+++|+|.+++.... ....++..+.+++.|++.||+|||+ ++|+||||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence 579999999999999997532 1345778889999999999999999 99999999999999999999999
Q ss_pred EeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHH
Q 040267 411 MDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWID 464 (538)
Q Consensus 411 ~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 464 (538)
+|||+++... ..++.++|||||||++|||++ |..||...... +...
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--------~~~~ 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------QVLK 232 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHH
Confidence 9999886321 115788999999999999999 78888643221 1111
Q ss_pred HHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 465 QLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 465 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.... +.... . ....+. .+.+++.+|++.+|++|||+.++++.|++.
T Consensus 233 ~~~~-~~~~~-----~-~~~~~~---~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 FVMD-GGYLD-----Q-PDNCPE---RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHc-CCCCC-----C-CCCCCH---HHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1111 11110 0 111123 345555599999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=270.34 Aligned_cols=215 Identities=26% Similarity=0.392 Sum_probs=165.2
Q ss_pred CeEeecCCceEEEEEeCC-CC--EEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLLD-GS--MLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
++||+|+||.||+|...+ +. .+|+|.++... ...+.+.+|++++.++ +|||| ..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999644 44 57889887432 3346788999999999 79999 34699999999
Q ss_pred CCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 349 GTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 349 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
|+|.+++.... ...+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence 99999997532 1247899999999999999999999 999999999999999999999999999
Q ss_pred CCcccC----------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 415 FSRLTN----------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 415 ~a~~~~----------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
++.... ..++.++||||||+++|||++ |..||...... ........ +.
T Consensus 158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~~-~~ 228 (270)
T cd05047 158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQ-GY 228 (270)
T ss_pred CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------HHHHHHhC-CC
Confidence 984211 116778999999999999997 99999643211 11111111 10
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.. + . .......+.+++.+|++.+|.+|||+.|+++.|.++.
T Consensus 229 ~~---~--~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 RL---E--K----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CC---C--C----CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00 0 0 1111223556666999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=282.79 Aligned_cols=159 Identities=19% Similarity=0.260 Sum_probs=138.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~ 346 (538)
.++|...+.||+|+||.||++.. .+++.||+|... ...+.+|++++++++||||+ .++|+||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 35799999999999999999994 568999999754 24578999999999999993 35899998
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC------
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------ 420 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------ 420 (538)
. ++|.+++.... .+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 166 ~-~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 239 (391)
T PHA03212 166 K-TDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK 239 (391)
T ss_pred C-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence 5 68999887654 58999999999999999999999 999999999999999999999999999986321
Q ss_pred ------------------CCCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 421 ------------------GDASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 421 ------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
..++.++|||||||++|||+||+.||..
T Consensus 240 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 240 YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred cccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 0167899999999999999999988754
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=268.58 Aligned_cols=218 Identities=20% Similarity=0.242 Sum_probs=167.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|+..+.||+|+||.||+|+. .+++.||+|.+.... .....+.+|+.++.+++|||| ..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4688889999999999999995 578899999987433 234567899999999999999 346899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.++++..+ .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06646 89 GGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR 163 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence 9999999997654 58999999999999999999999 9999999999999999999999999998863311
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||......+.. . ....... ..+..
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~----~-----~~~~~~~---~~~~~ 231 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL----F-----LMSKSNF---QPPKL 231 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh----e-----eeecCCC---CCCCC
Confidence 1456799999999999999999998643211100 0 0000000 01111
Q ss_pred cC-CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 481 TG-KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 481 ~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
.. ...+..+.+ ++.+||+.+|++|||++++++.+
T Consensus 232 ~~~~~~~~~~~~---li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KDKTKWSSTFHN---FVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccccCHHHHH---HHHHHhhCChhhCcCHHHHhcCC
Confidence 11 112334444 45599999999999999998743
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=276.91 Aligned_cols=224 Identities=22% Similarity=0.370 Sum_probs=172.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEcccccc--cHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACKL--GEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
++|...+.||+|+||.||++... ....+|+|.++.... ...++.+|+++++++ +||||
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778899999999999999741 245799999875332 235688999999999 69999
Q ss_pred cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
..+++|||+++|+|.+++.... ...+++.++.+++.|++.||+|||+ .+|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence 3469999999999999997532 1358999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccc
Q 040267 404 EDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKG 457 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 457 (538)
+++.+||+|||+++.... .++.++||||||+++|||++ |..||......
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~----- 243 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE----- 243 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 999999999999874321 16778999999999999999 88998753221
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.+.. ....+...+. ....+. .+.+++.+|++.+|++|||+.|+++.|+++....
T Consensus 244 ~~~~----~~~~~~~~~~------~~~~~~---~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 244 ELFK----LLREGHRMDK------PSNCTH---ELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHHH----HHHcCCCCCC------CCCCCH---HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 1111 1111111110 111122 3445556999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=270.92 Aligned_cols=226 Identities=20% Similarity=0.312 Sum_probs=169.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-----------------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC---
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-----------------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL--- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-----------------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni--- 337 (538)
++|+..+.||+|+||.||++... +...||+|.++... ...+++.+|++++++++|+||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999998532 23469999997532 234678999999999999998
Q ss_pred --------cccEEEeecCCCCHHHHhhcCCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCe
Q 040267 338 --------EKPLVYKYMSNGTLYSLLHSNGN---------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400 (538)
Q Consensus 338 --------~~~lv~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI 400 (538)
..++||||+++|+|.+++..... ..+++.++.+++.|++.||+|||+ .+|+|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence 34699999999999999976431 247888999999999999999999 9999999999999
Q ss_pred eeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh--CCCCCCCCcccc
Q 040267 401 LVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT--GQKPFEINASEE 453 (538)
Q Consensus 401 ll~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt--g~~p~~~~~~~~ 453 (538)
++++++.++|+|||+++.... .++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999874311 15678999999999999998 778886432211
Q ss_pred cccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 454 GYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.................. +. . ......+.+++.+||+.||++||++.||++.|++
T Consensus 242 -----~~~~~~~~~~~~~~~~~~-~~--~---~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 -----VIENTGEFFRDQGRQVYL-PK--P---ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHHHHHHHhhccccccC-CC--C---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111111111111100000 00 1 1122345566669999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=274.32 Aligned_cols=217 Identities=21% Similarity=0.322 Sum_probs=166.3
Q ss_pred CCCCCeEeecCCceEEEEEeCC------CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCCc-----------ccEE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNLE-----------KPLV 342 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni~-----------~~lv 342 (538)
|...+.||+|+||.||+|...+ +..||+|.++.... ..+.+.+|+.++..++||||+ .+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 4555789999999999998532 47899999975432 235688999999999999993 3579
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
+||+++++|.+++.... ...+++..+.+++.|++.||+|||+ .+|+||||||+||++++++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCce
Confidence 99999999999986321 1358889999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+++... ..++.++||||||+++|||++ |..||..... .++
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~ 235 (283)
T cd05091 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QDV 235 (283)
T ss_pred EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence 999999876431 115778999999999999998 8888875321 122
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
...... +.... . ....+.+ +.+++.+||+.+|++||++.||++.|+.
T Consensus 236 ~~~i~~-~~~~~-----~-~~~~~~~---~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 IEMIRN-RQVLP-----C-PDDCPAW---VYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHc-CCcCC-----C-CCCCCHH---HHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 222111 11111 0 1112233 4556669999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=276.41 Aligned_cols=215 Identities=20% Similarity=0.250 Sum_probs=164.8
Q ss_pred CCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCC-CCCCc-----------c
Q 040267 281 NFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLK-HPNLE-----------K 339 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~-H~ni~-----------~ 339 (538)
+|+..+.||+|+||.||+++. .+++.||+|.+++.. ...+.+..|+.++..++ |+||. .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477788999999999999884 358899999986422 22356788999999994 89982 3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 69999999999999997655 58999999999999999999999 99999999999999999999999999998742
Q ss_pred CC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 420 NG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 420 ~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.. .++.++|||||||++|||+||+.||....... ........... .
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~~~~~~~~~~~-~---- 226 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN----TQSEVSRRILK-C---- 226 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC----CHHHHHHHHhc-C----
Confidence 11 15678999999999999999999997432211 11111111111 0
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
++.+. ...+..+.++++ +|++.||++|| +++++++
T Consensus 227 --~~~~~-~~~~~~~~~li~---~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 --DPPFP-SFIGPEAQDLLH---KLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred --CCCCC-CCCCHHHHHHHH---HHcCCCHHHcCCCCCCCHHHHHc
Confidence 11111 122344555555 99999999999 6777765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-33 Score=290.99 Aligned_cols=230 Identities=19% Similarity=0.273 Sum_probs=166.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcc-----------------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK----------------- 339 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~----------------- 339 (538)
...+|...+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+.
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 345799999999999999999995 468999999886432 23457999999999999932
Q ss_pred --cEEEeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEecc
Q 040267 340 --PLVYKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFG 414 (538)
Q Consensus 340 --~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg 414 (538)
++||||+++ +|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 379999985 787777532 23468999999999999999999999 9999999999999999664 79999999
Q ss_pred CCcccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc---
Q 040267 415 FSRLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS--- 468 (538)
Q Consensus 415 ~a~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 468 (538)
+++.... .++.++|||||||++|||++|+.||......+. +.......-.
T Consensus 217 la~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~----~~~i~~~~~~p~~ 292 (440)
T PTZ00036 217 SAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ----LVRIIQVLGTPTE 292 (440)
T ss_pred cchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCCH
Confidence 9974321 167889999999999999999999986433211 1111100000
Q ss_pred ------cCCccc-----ccccccc---CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHhH
Q 040267 469 ------SGRIKD-----VIDKALT---GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSIA 521 (538)
Q Consensus 469 ------~~~~~~-----~~d~~l~---~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i~ 521 (538)
...+.+ +....+. +...+.++ .+++.+||+.||.+|||+.|+++. +.++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~---~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDA---INFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHH---HHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 000000 0000010 01122344 445559999999999999999853 44443
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=267.62 Aligned_cols=215 Identities=24% Similarity=0.361 Sum_probs=163.8
Q ss_pred CeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEEEeecC
Q 040267 286 NVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYMS 347 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~~ 347 (538)
+.||+|+||.||+|...+ ...||+|.+.... ...+.+.+|+.+++.++|||+ ..++++||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998532 3579999986422 234678899999999999999 2468999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++.... ...++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 999999997643 246888889999999999999999 9999999999999999999999999999863211
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhC-CCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTG-QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||++| ..||.... .......... +...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--------~~~~~~~~~~-~~~~------ 221 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--------SFDITVYLLQ-GRRL------ 221 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHhc-CCCC------
Confidence 156789999999999999995 55565321 1111211111 1100
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
......+ ..+.+++.+||+.+|++||++.||++.|+++..
T Consensus 222 ~~~~~~~---~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 LQPEYCP---DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCCCcCC---HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0011112 345566669999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=270.56 Aligned_cols=226 Identities=21% Similarity=0.319 Sum_probs=168.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC---------------CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD---------------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~---------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----- 337 (538)
++|...+.||+|+||.||++...+ ...||+|.++... .....+.+|++++++++|+|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999987532 2358999987532 234568999999999999999
Q ss_pred ------cccEEEeecCCCCHHHHhhcCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCee
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNG----------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 401 (538)
..++||||+++++|.+++.... ...+++..+++++.|++.||+|||+ .+++|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence 3469999999999999996532 1247899999999999999999999 99999999999999
Q ss_pred eCCCCCeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh--CCCCCCCCccccc
Q 040267 402 VDEDFDARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT--GQKPFEINASEEG 454 (538)
Q Consensus 402 l~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt--g~~p~~~~~~~~~ 454 (538)
+++++.+||+|||++.... ..++.++||||||+++|||++ |..||......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~-- 239 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE-- 239 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH--
Confidence 9999999999999986421 115789999999999999998 66777643221
Q ss_pred ccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 455 YKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.................... .....+ ..+.+++.+||+.||++|||+.+|++.|++
T Consensus 240 ---~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 ---QVIENTGEFFRNQGRQIYLS---QTPLCP---SPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ---HHHHHHHHhhhhccccccCC---CCCCCC---HHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 11111111111110000000 011122 345566669999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=273.12 Aligned_cols=226 Identities=18% Similarity=0.254 Sum_probs=170.2
Q ss_pred CCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------------ccc
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-------------EKP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-------------~~~ 340 (538)
.|+..+.||+|+||.||.+.. .++..||+|.++... ...+.+.+|++++++++|||+ ..+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 367778999999999999984 347889999987432 224578999999999999998 235
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++++|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 85 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 8999999999999997653 258999999999999999999999 999999999999999999999999999886431
Q ss_pred C--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccc-------cccccHHHHHHHHh
Q 040267 421 G--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEE-------GYKGNLVNWIDQLS 467 (538)
Q Consensus 421 ~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 467 (538)
. .++.++||||||+++|||+|++.|........ ........++.. .
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV-L 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH-H
Confidence 1 16778999999999999999887654211100 000011111111 1
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
..+.... ........+.+++.+|++.+|++|||+.++++.|+++
T Consensus 240 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRLP---------RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccCC---------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111100 0111223455566699999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=269.01 Aligned_cols=222 Identities=22% Similarity=0.353 Sum_probs=173.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|...+ ...||+|...... ...+.+.+|+.++++++|||+ ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 357778899999999999998533 3479999886533 234678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++..+..++.+++.||+|||+ .+++|+||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 86 ELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999999997644 258999999999999999999999 9999999999999999999999999998864211
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++||+++ |+.||...... ....+. ..+...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~----~~~~~~----- 227 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DVIGRI----ENGERL----- 227 (270)
T ss_pred ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHH----HcCCcC-----
Confidence 16678999999999999986 99999753321 111111 111100
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.. ....+.++.+ ++.+|+..+|++|||+.++++.|+++.++
T Consensus 228 ~~-~~~~~~~~~~---li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 PM-PPNCPPTLYS---LMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred CC-CCCCCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01 1122334444 55599999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=270.62 Aligned_cols=226 Identities=21% Similarity=0.295 Sum_probs=176.0
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc---------
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE--------- 338 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~--------- 338 (538)
.++.++..+.+.|+..+.||.|+||.||+|.. .+++.+|+|.+........++..|+.++.++ +|+|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 45667777788999999999999999999995 5688999999876554556788999999998 699982
Q ss_pred --------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 339 --------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 339 --------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
.+++|||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEE
Confidence 2699999999999999986554468899999999999999999999 99999999999999999999999
Q ss_pred EeccCCcccC----------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHH
Q 040267 411 MDFGFSRLTN----------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 411 ~Dfg~a~~~~----------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 462 (538)
+|||++.... ..++.++|||||||++|||++|+.||........ +
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~----~--- 235 (282)
T cd06636 163 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA----L--- 235 (282)
T ss_pred eeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh----h---
Confidence 9999876321 1145689999999999999999999974322110 0
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... ....+.......+.++. +++.+||+.||.+|||+.|+++
T Consensus 236 -~~~~------~~~~~~~~~~~~~~~~~---~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 -FLIP------RNPPPKLKSKKWSKKFI---DFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -hhHh------hCCCCCCcccccCHHHH---HHHHHHhCCChhhCcCHHHHhc
Confidence 0000 00111111112233444 4555999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=272.53 Aligned_cols=217 Identities=24% Similarity=0.375 Sum_probs=167.7
Q ss_pred CCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|...++||+|+||.||++... ++..+|+|.++... ...+.+.+|+++++.++|+|| ..+++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 5667789999999999999632 35689999987533 334679999999999999999 34689
Q ss_pred EeecCCCCHHHHhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 343 YKYMSNGTLYSLLHSNGN-------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
+||+++|+|.+++..... ..+++.+++.++.|++.|++|||+ .+++||||||+||++++++.+|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCEE
Confidence 999999999999976431 358999999999999999999999 9999999999999999999999
Q ss_pred EEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHH
Q 040267 410 IMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 410 l~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 463 (538)
|+|||++.... ..++.++|||||||++|||++ |+.||......+ . .
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~---~ 234 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-----A---I 234 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-----H---H
Confidence 99999885321 116778999999999999998 999986432211 1 1
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
......... . . ....+..+. +++.+||+.||++||++.||++.|+
T Consensus 235 ~~~~~~~~~-~-----~-~~~~~~~~~---~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 ECITQGREL-E-----R-PRTCPPEVY---AIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHcCccC-C-----C-CCCCCHHHH---HHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111100 0 0 111223444 4555999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=271.61 Aligned_cols=218 Identities=22% Similarity=0.345 Sum_probs=169.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|...+ +..||+|.+.... .....+.+|+.+++.++|+|| ..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 467788999999999999998532 3689999987543 223568899999999999999 356
Q ss_pred EEEeecCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 341 LVYKYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
+||||+++|+|.+++.... ...++|..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECC
Confidence 9999999999999997532 1247899999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHH
Q 040267 413 FGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 413 fg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
||+++... ..++.++|||||||++||++| |+.||...... .+..+.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----~~~~~~--- 234 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-----EVLKFV--- 234 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-----HHHHHH---
Confidence 99876321 116788999999999999998 99998753221 111111
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
..+.... .. ...+ ..+.+++.+||+.+|++|||+.++++.|+
T Consensus 235 -~~~~~~~-----~~-~~~~---~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 -IDGGHLD-----LP-ENCP---DKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -hcCCCCC-----CC-CCCC---HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1111111 11 1122 34455566999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=272.88 Aligned_cols=220 Identities=23% Similarity=0.334 Sum_probs=171.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.++|+..+.||+|+||.||+|... ++..||+|.++... ....++.+|+.++++++|||+ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457888899999999999999853 46789999987532 234668899999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCC
Q 040267 340 PLVYKYMSNGTLYSLLHSNG--------------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 399 (538)
++|+||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 69999999999999997432 1247888999999999999999999 999999999999
Q ss_pred eeeCCCCCeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccc
Q 040267 400 ILVDEDFDARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEE 453 (538)
Q Consensus 400 Ill~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~ 453 (538)
|++++++.+||+|||++.... ..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 999999999999999886321 115778999999999999998 8889864322
Q ss_pred cccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 454 GYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.+.... ...+..... ....+ ..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 239 ------~~~~~~-~~~~~~~~~------~~~~~---~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 ------EEVIYY-VRDGNVLSC------PDNCP---LELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ------HHHHHH-HhcCCCCCC------CCCCC---HHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 122222 112221110 11122 345556669999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=277.55 Aligned_cols=220 Identities=21% Similarity=0.307 Sum_probs=182.2
Q ss_pred CCCCCCeEeecCCceEEEEEeCC---CC--EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD---GS--MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~---~~--~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv~ 343 (538)
.....++||+|-||.||+|...+ |. .||||..+.+. ...+.|..|.-+|+.++||||+ .++||
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~Wivm 469 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVM 469 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEE
Confidence 34455789999999999999532 33 68999987633 4467899999999999999993 46999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|.++-|.|..|++.... .++......++.||..||+|||+ .++|||||-.+|||+.....+||+|||+++.+.++
T Consensus 470 EL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred ecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 99999999999997663 68899999999999999999999 99999999999999999999999999999977653
Q ss_pred -----------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
+|.++|||-|||.+||++. |.+||.+-.. .++...+.+
T Consensus 546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN------------------sDVI~~iEn 607 (974)
T KOG4257|consen 546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN------------------SDVIGHIEN 607 (974)
T ss_pred hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc------------------cceEEEecC
Confidence 7899999999999999987 9999985322 122222222
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.-+...++.++..+..|+.+||++||.+||.+.|+...|+++.+
T Consensus 608 GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 608 GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 22333455566667778889999999999999999999999876
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=280.05 Aligned_cols=216 Identities=14% Similarity=0.207 Sum_probs=167.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||.||+|.. .+++.||||+++... .....+.+|+.++..++|||| ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4688889999999999999995 468999999997532 223457889999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999998765 58999999999999999999999 999999999999999999999999999875321
Q ss_pred ----------------------------------------------------------CCCCCccCcccHHHHHHHHHhC
Q 040267 421 ----------------------------------------------------------GDASLQKDVHGFGVVLLELVTG 442 (538)
Q Consensus 421 ----------------------------------------------------------~~~~~~~DV~S~Gvvl~elltg 442 (538)
..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 1167789999999999999999
Q ss_pred CCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCC---HHHHHHH
Q 040267 443 QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWS---MYQVYIS 516 (538)
Q Consensus 443 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~evl~~ 516 (538)
+.||......+ .............. .. ....++++.++++ +|+. +|.+|++ +.|+++.
T Consensus 236 ~~Pf~~~~~~~--------~~~~i~~~~~~~~~-~~---~~~~s~~~~~li~---~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 236 YPPFCSDNPQE--------TYRKIINWKETLQF-PD---EVPLSPEAKDLIK---RLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCHHH--------HHHHHHcCCCccCC-CC---CCCCCHHHHHHHH---HHcc-CHhhcCCCCCHHHHhcC
Confidence 99997543211 11111110000000 00 1123445566665 8886 8999998 8888763
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=268.56 Aligned_cols=213 Identities=19% Similarity=0.267 Sum_probs=162.5
Q ss_pred EeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 288 LVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 288 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
||+|+||.||++.. .+|+.||+|.+.... .....+..|++++++++|||| ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 68999999999985 468999999986422 123446679999999999999 34699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGT 157 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCC
Confidence 999876655568999999999999999999999 9999999999999999999999999998864321
Q ss_pred ------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHH
Q 040267 422 ------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEI 489 (538)
Q Consensus 422 ------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 489 (538)
.++.++|||||||++|||++|+.||....... ........... ... . ......+.++
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~-~~~----~--~~~~~~~~~~ 226 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV----AKEELKRRTLE-DEV----K--FEHQNFTEES 226 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh----hHHHHHHHhhc-ccc----c--cccccCCHHH
Confidence 16788999999999999999999997532211 11111111111 111 0 0111223445
Q ss_pred HHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 490 LQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 490 ~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
.++++ +||+.||++||+++|+++.+
T Consensus 227 ~~li~---~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 227 KDICR---LFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHH---HHhccCHhhCCCCccchhhh
Confidence 55555 99999999999998776443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=266.32 Aligned_cols=213 Identities=22% Similarity=0.283 Sum_probs=166.2
Q ss_pred CeEeecCCceEEEEEeCC--CC--EEEEEEcccccc--cHHHHHHHHHHHhcCCCCCCc----------ccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD--GS--MLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~--~~--~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~~g 349 (538)
+.||+|++|.||+|...+ ++ .||+|.++.... ..+++.+|++++++++||||. .++|+||+++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG 80 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence 368999999999998543 33 699999976443 346789999999999999993 35899999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.......+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 99999987543468999999999999999999999 9999999999999999999999999998875422
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++ |+.||...... .+ ........... ...
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~---~~~~~~~~~~~------~~~ 223 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QI---LKKIDKEGERL------ERP 223 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HH---HHHHHhcCCcC------CCC
Confidence 15678999999999999999 99999643221 11 11111111000 001
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
...+ ..+.+++.+|++.+|++|||+.++++.|.
T Consensus 224 ~~~~---~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACP---QDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCC---HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1122 34555666999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=278.55 Aligned_cols=215 Identities=19% Similarity=0.259 Sum_probs=169.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|+++... .....+.+|++++..++|+|| ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999954 68999999997532 234568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 9999999999998764 68999999999999999999999 9999999999999999999999999999864321
Q ss_pred --------------------------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 422 --------------------------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 422 --------------------------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
.++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 167899999999999999999999985432
Q ss_pred cccccccHHHHHHHHhcc-CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHHH
Q 040267 452 EEGYKGNLVNWIDQLSSS-GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWS-MYQVYIS 516 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~ 516 (538)
.+ ........ .... -+. ....+.++..++. +|+. ||.+||+ +.|+++.
T Consensus 236 ~~--------~~~~i~~~~~~~~---~p~--~~~~~~~~~~li~---~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 QE--------TYNKIINWKESLR---FPP--DPPVSPEAIDLIC---RLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HH--------HHHHHhccCCccc---CCC--CCCCCHHHHHHHH---HHcc-ChhhcCCCHHHHhcC
Confidence 11 11111110 0000 000 0012345555555 9997 9999999 9999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=278.63 Aligned_cols=165 Identities=17% Similarity=0.210 Sum_probs=144.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.++.+++|+|| ..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688889999999999999985 468999999997532 223567889999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999999998765 68999999999999999999999 999999999999999999999999999976321
Q ss_pred -------------------------------------------------------CCCCCccCcccHHHHHHHHHhCCCC
Q 040267 421 -------------------------------------------------------GDASLQKDVHGFGVVLLELVTGQKP 445 (538)
Q Consensus 421 -------------------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p 445 (538)
..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 1167889999999999999999999
Q ss_pred CCCC
Q 040267 446 FEIN 449 (538)
Q Consensus 446 ~~~~ 449 (538)
|...
T Consensus 236 f~~~ 239 (363)
T cd05628 236 FCSE 239 (363)
T ss_pred CCCC
Confidence 9753
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=265.31 Aligned_cols=233 Identities=24% Similarity=0.316 Sum_probs=170.7
Q ss_pred CCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhc--CCCCCC---------------cccEEEeec
Q 040267 284 AQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGL--LKHPNL---------------EKPLVYKYM 346 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~ni---------------~~~lv~e~~ 346 (538)
..++||+|+||.||||.+ +++.||||++... ..+.|.+|-++.+. ++|+|| ..+||+||.
T Consensus 214 l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred hHHHhhcCccceeehhhc-cCceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 346799999999999998 5599999999753 34668888777665 579999 446999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC------HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+.|+|.+||+.+- ++|....+++..+++||+|||++. .++|+|||||++|||+.+|+++.|+|||+|..+.
T Consensus 291 ~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 291 PKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred cCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 9999999999875 999999999999999999999743 4689999999999999999999999999998765
Q ss_pred CC-------------------------------CCCccCcccHHHHHHHHHhCCCCCCC-Cccc-------ccccccHHH
Q 040267 421 GD-------------------------------ASLQKDVHGFGVVLLELVTGQKPFEI-NASE-------EGYKGNLVN 461 (538)
Q Consensus 421 ~~-------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~-~~~~-------~~~~~~~~~ 461 (538)
.. .-.+.||||+|.|||||+++..-++. ...+ +....--.+
T Consensus 368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e 447 (534)
T KOG3653|consen 368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE 447 (534)
T ss_pred CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence 42 12367999999999999997654431 1110 000000112
Q ss_pred HHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
-++...-..+....+...++.. ..+..+.+.+-.||+.||+.|-|+.=|.+++.++.....
T Consensus 448 ~mq~~VV~kK~RP~~p~~W~~h---~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 448 EMQELVVRKKQRPKIPDAWRKH---AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHhhccCCCChhhhhcC---ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 2222222222222222222222 233444455559999999999999999999988765544
|
|
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=272.63 Aligned_cols=228 Identities=21% Similarity=0.269 Sum_probs=177.4
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc---------
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE--------- 338 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~--------- 338 (538)
++++++..++++|...+.||+|+||.||++.. .+++.+|+|.+.........+.+|+.++.++ +|||+.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 45677778899999999999999999999995 5688999999976544456788999999999 799991
Q ss_pred -------ccEEEeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
.++|+||+++|+|.++++.. ....+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEE
Confidence 36999999999999988642 22468999999999999999999999 9999999999999999999999
Q ss_pred EEeccCCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHH
Q 040267 410 IMDFGFSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN 461 (538)
Q Consensus 410 l~Dfg~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 461 (538)
|+|||++..... .++.++|||||||++|||++|+.||......+ .+.
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~----~~~- 243 (291)
T cd06639 169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK----TLF- 243 (291)
T ss_pred EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH----HHH-
Confidence 999998764221 03678999999999999999999997532211 111
Q ss_pred HHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
... ......+.+ .......+.+++.+|++.+|++||++.|+++.
T Consensus 244 ---~~~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 ---KIP-RNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ---HHh-cCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111 111111111 11122235556669999999999999999863
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=269.01 Aligned_cols=222 Identities=23% Similarity=0.362 Sum_probs=173.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCC----EEEEEEcccccc--cHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGS----MLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
.+|...+.||+|+||.||+|... +|. .+|+|.+..... ...++.+|+.++++++|||+. .++|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 45677789999999999999853 343 689998875432 346788999999999999993 4589
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++..... .+++..+.+++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++....
T Consensus 87 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 87 TQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EecCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 999999999999986543 58999999999999999999999 9999999999999999999999999998874321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++||+++ |+.||..... .++..... .+... -
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~-~~~~~--~ 231 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLE-KGERL--P 231 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHh-CCCCC--C
Confidence 15678999999999999999 9999975322 11111111 11100 0
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. ....+ ..+.+++.+||..+|++||++.++++.|.++...
T Consensus 232 ~----~~~~~---~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 232 Q----PPICT---IDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred C----CCCCC---HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 0 01112 2345556699999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=279.84 Aligned_cols=164 Identities=23% Similarity=0.337 Sum_probs=141.2
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------------ccc
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------------EKP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------------~~~ 340 (538)
+|+..+.||+|+||.||++.. .+++.||+|.+.... ...+++.+|+++++.++|+|| ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999995 578999999986432 234578899999999999999 246
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+|+||+. ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 8999997 58888886554 69999999999999999999999 999999999999999999999999999986421
Q ss_pred C-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 421 G-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 421 ~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. .++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 1 15678999999999999999999997643
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=275.52 Aligned_cols=207 Identities=20% Similarity=0.284 Sum_probs=160.8
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
++||+|+||.||+|+.. +++.||+|.++... ...+.+..|.+++..+ +|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999954 58899999997532 2234577899998876 79999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 81 GDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence 99999997655 58999999999999999999999 999999999999999999999999999886421
Q ss_pred ---------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 421 ---------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
..++.++|||||||++|||++|+.||......+ ....... +.. . .....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--------~~~~i~~-~~~---~----~p~~~ 219 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--------LFESILH-DDV---L----YPVWL 219 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--------HHHHHHc-CCC---C----CCCCC
Confidence 016789999999999999999999998543211 1111111 110 0 01112
Q ss_pred HHHHHHHHHHHhHccCCCCCCCC-------CHHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKW-------SMYQVYIS 516 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RP-------s~~evl~~ 516 (538)
+.++.++++ +|++.||++|| ++.++++.
T Consensus 220 ~~~~~~ll~---~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 220 SKEAVSILK---AFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CHHHHHHHH---HHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 344555555 99999999999 77777653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=265.92 Aligned_cols=215 Identities=19% Similarity=0.243 Sum_probs=167.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc------cHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL------GEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|...+.||+|++|.||+|.. .+++.||+|.+..... ..+.+.+|++++++++|||| ..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999985 4689999999864321 12468889999999999999 3468
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|+||+++++|.+++.... .+++..+.+++.|++.||+|||+ .+|+|+||||+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999998765 58899999999999999999999 9999999999999999999999999998863211
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++|||++|+.||......+ . ......... .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~---~~~~~~~~~-~-- 225 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-----A---IFKIATQPT-N-- 225 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-----H---HHHHhccCC-C--
Confidence 15678999999999999999999997432110 0 111111100 0
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+. ...+..+.. ++.+||+.+|.+|||+.|+++.
T Consensus 226 --~~~~-~~~~~~~~~---li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 --PQLP-SHVSPDARN---FLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --CCCC-ccCCHHHHH---HHHHHhhcCcccCCCHHHHhhC
Confidence 1111 112234444 4459999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=276.51 Aligned_cols=225 Identities=23% Similarity=0.330 Sum_probs=173.6
Q ss_pred CCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCCc-----------
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNLE----------- 338 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni~----------- 338 (538)
+|...+.||+|+||.||+|... .+..||+|.++... ...+++.+|+++++++ +||||.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 5778899999999999999732 12368999887532 2246789999999999 799993
Q ss_pred ccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC
Q 040267 339 KPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE 404 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 404 (538)
.++++||+++|+|.+++.... ...++|.++..++.|++.||+|||+ .+|+||||||+||++++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~~ 169 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTE 169 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcC
Confidence 469999999999999997532 2358899999999999999999999 99999999999999999
Q ss_pred CCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccccc
Q 040267 405 DFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGN 458 (538)
Q Consensus 405 ~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 458 (538)
++.+||+|||+++.... .++.++||||||+++|||++ |..||.....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------- 242 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------- 242 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-------
Confidence 99999999999874321 15678999999999999999 8888875322
Q ss_pred HHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 459 LVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.++...... +...+ ........+.+++.+|++.+|++|||+.|+++.|+++......
T Consensus 243 -~~~~~~~~~-~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~~ 299 (334)
T cd05100 243 -EELFKLLKE-GHRMD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTST 299 (334)
T ss_pred -HHHHHHHHc-CCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcCC
Confidence 222222111 11110 1111223455566699999999999999999999998854433
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=268.05 Aligned_cols=218 Identities=23% Similarity=0.367 Sum_probs=168.2
Q ss_pred CCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
|...+.||+|+||.||+|... +++.||||.+.... ...+++.+|++++++++|||+.
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456688999999999999853 36789999987533 2245688999999999999981
Q ss_pred -ccEEEeecCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNG----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
.++++||+++|+|.+++.... ...+++....+++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 147889999999999875321 2357899999999999999999999 99999999999999999999999999
Q ss_pred cCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHh
Q 040267 414 GFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 414 g~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
|+++.... .++.++||||||+++|||++ |+.||...... .+..+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~--- 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-----EIYNYLI--- 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-----HHHHHHH---
Confidence 99875421 14678999999999999999 88888643221 1222111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
...... . .......+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 230 ~~~~~~------~----~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KGNRLK------Q----PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCcCC------C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111100 0 011223466666699999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=263.73 Aligned_cols=211 Identities=25% Similarity=0.399 Sum_probs=166.3
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHH
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLY 352 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~ 352 (538)
++||+|++|.||++...+++.||+|.++.... ..+.+.+|++++++++|+|| ..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36899999999999976699999999875432 34678999999999999999 356999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----------
Q 040267 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----------- 421 (538)
Q Consensus 353 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----------- 421 (538)
+++..... .+++..+..++.+++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~l~~~~~-~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKKN-RLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 99976432 58899999999999999999999 9999999999999999999999999998874321
Q ss_pred --------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 422 --------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 422 --------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
.++.++||||||+++|||+| |..||...... .....+ .... ....+.
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-----~~~~~~----~~~~---------~~~~~~ 218 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-----QTRERI----ESGY---------RMPAPQ 218 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-----HHHHHH----hcCC---------CCCCCc
Confidence 15678999999999999999 88888653221 111111 1100 000111
Q ss_pred HHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 487 DEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
.....+.+++.+|++.+|++|||+.|+++.|+
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 12234555666999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=278.60 Aligned_cols=218 Identities=17% Similarity=0.139 Sum_probs=165.8
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.|...+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++++++|+|| ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577889999999999999984 568899999996532 223568899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc-----
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT----- 419 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~----- 419 (538)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999998765 58899999999999999999999 99999999999999999999999999986421
Q ss_pred -----------------------------------------------------C------------CCCCCccCcccHHH
Q 040267 420 -----------------------------------------------------N------------GDASLQKDVHGFGV 434 (538)
Q Consensus 420 -----------------------------------------------------~------------~~~~~~~DV~S~Gv 434 (538)
+ ..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0 11678899999999
Q ss_pred HHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 040267 435 VLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVY 514 (538)
Q Consensus 435 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 514 (538)
++|||+||+.||......+. ............+ . .....+.++.+++.- +.|+..+|..||++.|++
T Consensus 237 il~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~-~---~~~~~s~~~~dli~~-ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTET--------QLKVINWENTLHI-P---PQVKLSPEAVDLITK-LCCSAEERLGRNGADDIK 303 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHH--------HHHHHccccccCC-C---CCCCCCHHHHHHHHH-HccCcccccCCCCHHHHh
Confidence 99999999999975432111 0111100000000 0 001123455555551 126677888899999998
Q ss_pred HH
Q 040267 515 IS 516 (538)
Q Consensus 515 ~~ 516 (538)
+.
T Consensus 304 ~h 305 (381)
T cd05626 304 AH 305 (381)
T ss_pred cC
Confidence 74
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=278.53 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=168.6
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL----------- 337 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni----------- 337 (538)
++....++|+..+.||+|+||.||++... +++.+|+|.+.+.. ...+.+.+|+.+++.++||||
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34445678999999999999999999954 58899999986422 223457899999999999999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++.
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccce
Confidence 346999999999999999754 38899999999999999999999 999999999999999999999999999987
Q ss_pred ccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 418 LTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 418 ~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
.... .++.++||||+||++|||++|+.||...... .........
T Consensus 191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--------~~~~~i~~~ 262 (370)
T cd05621 191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--------GTYSKIMDH 262 (370)
T ss_pred ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC
Confidence 5321 0457899999999999999999999753321 111111111
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE--KWSMYQVYIS 516 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 516 (538)
....... .....+..+..++. .|++.++.+ ||++.|+++.
T Consensus 263 ~~~~~~p----~~~~~s~~~~~li~---~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 263 KNSLNFP----EDVEISKHAKNLIC---AFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CcccCCC----CcccCCHHHHHHHH---HHccCchhccCCCCHHHHhcC
Confidence 1100000 00112345555555 888755543 8999999875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=277.04 Aligned_cols=208 Identities=20% Similarity=0.271 Sum_probs=162.1
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
+.||+|+||.||++.. .+++.||+|.++... ....++.+|++++..++|||| ..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999984 568999999997532 223567889999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--------- 420 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--------- 420 (538)
+|.+++.... .+++..+..++.|++.||+|||+ ..+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 81 ELFFHLSRER--VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccc
Confidence 9999987654 68999999999999999999995 2689999999999999999999999999886421
Q ss_pred --------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 421 --------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 421 --------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
..++.++|||||||++|||+||+.||...... ....... .+.. .+. ...+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~-~~~~------~~p-~~~~ 220 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELIL-MEEI------RFP-RTLS 220 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------HHHHHHh-cCCC------CCC-CCCC
Confidence 11678999999999999999999999753221 1111111 1110 011 1123
Q ss_pred HHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 487 DEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
.++.++++ +|++.||++|+ ++.++++.
T Consensus 221 ~~~~~li~---~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 221 PEAKSLLS---GLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHH---HHhhcCHHHhCCCCCCCHHHHhcC
Confidence 44555555 99999999996 89998754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=289.56 Aligned_cols=172 Identities=16% Similarity=0.196 Sum_probs=140.3
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC---------------
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------------- 337 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------------- 337 (538)
++...+++|...++||+|+||+||+|.. .+++.||||+++.......++..|++++.+++|.++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3444578899999999999999999995 468899999997544334556778888888876553
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC--------
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-------- 406 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-------- 406 (538)
..++|||++ +++|.+++...+ .+++..+..|+.||+.||+|||+ ..+||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccc
Confidence 235888887 678999887665 69999999999999999999996 14899999999999998765
Q ss_pred --------CeEEEeccCCcccC--------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 407 --------DARIMDFGFSRLTN--------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 407 --------~~kl~Dfg~a~~~~--------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.+||+|||.+.... ..++.++|||||||++|||++|+.||....
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred cccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 49999999875321 127789999999999999999999997643
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=267.58 Aligned_cols=226 Identities=19% Similarity=0.304 Sum_probs=171.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC-----------------CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC--
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD-----------------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-- 337 (538)
.++|...+.||+|+||.||+|...+ +..||+|.+.... ...+++.+|++++++++|||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568888999999999999998532 2468999987543 234678899999999999998
Q ss_pred ---------cccEEEeecCCCCHHHHhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCC
Q 040267 338 ---------EKPLVYKYMSNGTLYSLLHSNG---------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399 (538)
Q Consensus 338 ---------~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 399 (538)
..++++||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence 3468999999999999997643 1258999999999999999999999 999999999999
Q ss_pred eeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh--CCCCCCCCccc
Q 040267 400 ILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT--GQKPFEINASE 452 (538)
Q Consensus 400 Ill~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt--g~~p~~~~~~~ 452 (538)
|++++++.++|+|||+++.... .++.++||||||+++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD- 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence 9999999999999999874210 16788999999999999998 6778764321
Q ss_pred ccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 453 EGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
..+.................+ ........+.+++.+|++.||++|||+.||++.|+
T Consensus 240 ----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 ----QQVIENAGHFFRDDGRQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ----HHHHHHHHhccccccccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 112222222211111111111 11112234566666999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=282.54 Aligned_cols=212 Identities=22% Similarity=0.277 Sum_probs=175.5
Q ss_pred CCeEeecCCceEEEEEeCC--CC--EEEEEEcccccc--cHHHHHHHHHHHhcCCCCCCcc----------cEEEeecCC
Q 040267 285 QNVLVSTWTGTTYKAMLLD--GS--MLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNLEK----------PLVYKYMSN 348 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~--~~--~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni~~----------~lv~e~~~~ 348 (538)
.++||+|.||+|++|.|.. |+ .||||.++.... ...+|++|+.+|.+++|+|+++ .||+|+++.
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl 194 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL 194 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence 3679999999999999753 44 689999986553 4688999999999999999943 489999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------ 422 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------ 422 (538)
|+|.+.|++.....|-......++.|||.|++||.. +++|||||-.+|+|+-....+||+|||+.+.++..
T Consensus 195 GSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 195 GSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred chHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 999999998555578888999999999999999999 99999999999999999999999999999976542
Q ss_pred --------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
++.++|||+|||++|||+| |+.||.+.... . +.+.+|..-+
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----q-------------IL~~iD~~er 333 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----Q-------------ILKNIDAGER 333 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-----H-------------HHHhcccccc
Confidence 7889999999999999999 89999864321 1 1122232222
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
-..+..+.+++.++++.||..+|++|||+..|.+.+
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 233445677788888899999999999999998544
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.6e-32 Score=271.55 Aligned_cols=206 Identities=20% Similarity=0.300 Sum_probs=161.0
Q ss_pred CeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 286 NVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+.||+|+||.||+++. .+++.||+|.++... .....+.+|+.+++.++|||| ..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999984 357899999987432 223457889999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++...+ .+.+..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc
Confidence 99999999998765 58888999999999999999999 9999999999999999999999999999863210
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++|+.||..... ......... +.. .+ .
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--------~~~~~~~~~-~~~------~~-~ 220 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--------KKTIDKILK-GKL------NL-P 220 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--------HHHHHHHHc-CCC------CC-C
Confidence 156789999999999999999999975322 111111111 111 01 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
...+..+.++++ +|++.||++|| ++.++++
T Consensus 221 ~~~~~~~~~li~---~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 221 PYLTPEARDLLK---KLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCHHHHHHHH---HHcccCHhHcCCCCCCCHHHHhc
Confidence 122334455555 99999999999 7888766
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=263.39 Aligned_cols=215 Identities=22% Similarity=0.329 Sum_probs=161.1
Q ss_pred eEeecCCceEEEEEeCC---CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCC
Q 040267 287 VLVSTWTGTTYKAMLLD---GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGT 350 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gs 350 (538)
.||+|+||.||+|...+ +..+|+|.++... .....+.+|+.++++++|||| ..++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998543 4579999987543 223568899999999999999 3469999999999
Q ss_pred HHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 351 LYSLLHSNG---NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 351 L~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
|.+++.... ....++..+.+++.|++.|++|||+ .+++|+||||+||+++.++++||+|||+++....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999997532 2346778888999999999999999 9999999999999999999999999998853211
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++||||||+++|||++ |+.||......+ ...+. . .+....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----~~~~~---~-~~~~~~ 229 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-----VLTYT---V-REQQLK 229 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-----HHHHH---h-hcccCC
Confidence 02568999999999999996 999997532211 11110 1 111112
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
..++.+.. ..++....+++ .|+ .+|++|||++||++.|+
T Consensus 230 ~~~~~~~~-~~~~~~~~l~~---~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKL-PLSDRWYEVMQ---FCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCC-CCChHHHHHHH---HHh-cCcccCCCHHHHHHHhc
Confidence 22222211 12334444555 998 58999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-32 Score=275.31 Aligned_cols=206 Identities=21% Similarity=0.295 Sum_probs=160.1
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCC-C-----------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPN-L-----------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~n-i-----------~~~lv~ 343 (538)
+|+..+.||+|+||.||+|... +++.||+|.++... ...+.+..|++++..++|++ | ..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4777899999999999999954 57899999997532 23456788999999998765 4 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 9999999999997665 58999999999999999999999 999999999999999999999999999876321
Q ss_pred --------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 421 --------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 421 --------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
..++.++|||||||++|||+||+.||......+ +. .... ... ..+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-----~~---~~i~-~~~------~~~ 220 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-----LF---QSIM-EHN------VSY 220 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----HH---HHHH-cCC------CCC
Confidence 116788999999999999999999997533211 11 1111 111 001
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
. ...+.++.+++ .+|++.||.+||+.
T Consensus 221 ~-~~~~~~~~~li---~~~l~~~P~~R~~~ 246 (324)
T cd05587 221 P-KSLSKEAVSIC---KGLLTKHPAKRLGC 246 (324)
T ss_pred C-CCCCHHHHHHH---HHHhhcCHHHcCCC
Confidence 1 11233444444 49999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=265.68 Aligned_cols=215 Identities=20% Similarity=0.274 Sum_probs=168.8
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc--cccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC--KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+|+..+.||+|+||.||++.. .++..+|+|.++.. ....+.+.+|+.+++.++|+|+ ..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 467778999999999999995 46899999998642 2334678899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.+++.......+++.....++.|++.||.|||+ .+|+|+||||+||++++++.++++|||.+.....
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence 99999999876544568999999999999999999999 9999999999999999999999999999864421
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|+|++|+.||..... ........ .+....+ ..
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~~~~------~~ 222 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--------KNLILKVC-QGSYKPL------PS 222 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--------HHHHHHHh-cCCCCCC------Cc
Confidence 156789999999999999999999975321 11111111 1111111 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+..+. +++.+||+.||++|||+.|++..
T Consensus 223 ~~~~~~~---~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELR---SLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHH---HHHHHHHhCCcccCCCHHHHhhc
Confidence 1223344 45559999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=263.97 Aligned_cols=233 Identities=21% Similarity=0.350 Sum_probs=181.5
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC--CCCCC---------------cc
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL--KHPNL---------------EK 339 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~H~ni---------------~~ 339 (538)
.........+.||+|.||.||+|.+ .|+.||||++... +++.+.+|.++.+.+ +|+|| ..
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 3444566778999999999999999 7889999999753 345677888877764 99999 55
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-----CCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHH-----CCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-----~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
+||.+|-+.|||+|||... .++-...++++..+|.||++||. +..+.|.|||||+.|||+..++.+.|+|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred EEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 7999999999999999885 49999999999999999999995 345789999999999999999999999999
Q ss_pred CCcccCCC---------------------------------CCCccCcccHHHHHHHHHhC----------CCCCCCCcc
Q 040267 415 FSRLTNGD---------------------------------ASLQKDVHGFGVVLLELVTG----------QKPFEINAS 451 (538)
Q Consensus 415 ~a~~~~~~---------------------------------~~~~~DV~S~Gvvl~elltg----------~~p~~~~~~ 451 (538)
+|...... .-..+||||||.|+||++.+ +.||.+..+
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 99754332 22458999999999999863 356664333
Q ss_pred cccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 452 EEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.+-. .+-+++.+..+++...+++++. ..+.+..+.+++..||..+|+.|-|+-.|-+.|.++.+
T Consensus 442 ~DPs----~eeMrkVVCv~~~RP~ipnrW~---s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 442 SDPS----FEEMRKVVCVQKLRPNIPNRWK---SDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCC----HHHHhcceeecccCCCCCcccc---cCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 2211 1112222333333333333332 34678888888889999999999999999999998875
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.4e-32 Score=270.58 Aligned_cols=214 Identities=19% Similarity=0.331 Sum_probs=167.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.+|+..+.||+|++|.||+|.. .+++.||+|.+.... ...+.+.+|+.+++.++|+|+ ..++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4677788999999999999984 568999999987543 334678899999999999999 356999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|.+++... .+++.++..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++.....
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 173 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence 999999998754 48999999999999999999999 9999999999999999999999999998764211
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... .+.......+. +.+.
T Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--------~~~~~~~~~~~------~~~~-- 237 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGT------PELQ-- 237 (296)
T ss_pred CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--------HhHHHHhcCCC------CCCC--
Confidence 1567899999999999999999999753221 11111111110 0000
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
........+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 11112233455666999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=268.78 Aligned_cols=211 Identities=18% Similarity=0.284 Sum_probs=165.0
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
|+..+.||+|+||.||+|.. .++..||+|.++... ...+.+.+|++++++++|||+ ..++|+||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 44456799999999999985 458899999987432 234568899999999999999 3579999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+++|.+++... .+++..+..++.|++.|++|||+ .+++|+||+|+||++++++.++++|||++.....
T Consensus 86 ~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06642 86 GGSALDLLKPG---PLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence 99999998753 48999999999999999999999 9999999999999999999999999999864321
Q ss_pred -----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++|||++|+.|+...... ....+ ...+. .+.+..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~----~~~~~-----~~~~~~-- 223 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----RVLFL----IPKNS-----PPTLEG-- 223 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----hHHhh----hhcCC-----CCCCCc--
Confidence 1567899999999999999999998743221 11111 11110 111111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.....+.+++.+|++.+|++||+|.+|++.
T Consensus 224 --~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 224 --QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred --ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 122334555569999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.8e-32 Score=268.69 Aligned_cols=228 Identities=18% Similarity=0.246 Sum_probs=175.5
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc---------
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE--------- 338 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~--------- 338 (538)
+.++.+..++++|+..+.||+|+||.||++.. .+++.+|+|.++.......++.+|+.++.++ +|||+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34466777889999999999999999999985 4588999999876444456788999999999 699992
Q ss_pred -------ccEEEeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
.++||||+++|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEE
Confidence 37999999999999988642 22468899999999999999999999 9999999999999999999999
Q ss_pred EEeccCCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHH
Q 040267 410 IMDFGFSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN 461 (538)
Q Consensus 410 l~Dfg~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 461 (538)
|+|||++..... .++.++|||||||++|||++|+.||....... .
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-------~ 237 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR-------A 237 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-------H
Confidence 999998864221 14668999999999999999999997532211 0
Q ss_pred HHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. .... ........+ ....+.. +.+++.+|++.||++|||+.||++.
T Consensus 238 ~-~~~~-~~~~~~~~~----~~~~~~~---~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 L-FKIP-RNPPPTLHQ----PELWSNE---FNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred H-hhcc-ccCCCcccC----CCCcCHH---HHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 0000 000000111 1112233 4455559999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.6e-32 Score=263.29 Aligned_cols=212 Identities=26% Similarity=0.390 Sum_probs=167.7
Q ss_pred CeEeecCCceEEEEEeCC----CCEEEEEEccccccc--HHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLLD----GSMLAIKRLSACKLG--EKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|.... +..||+|.++..... .+++.+|++.+..++|+|+ ..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999999643 789999999764433 5778999999999999999 34699999999
Q ss_pred CCHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 349 GTLYSLLHSNG-------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 349 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
++|.+++.... ...+++.++.+++.|++.||+|||+ .+++|+||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999998751 2469999999999999999999999 9999999999999999999999999999975432
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||+|+++|||++ |+.||...... .+.. .... +...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~---~~~~-~~~~-- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-----EVLE---YLRK-GYRL-- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-----HHHH---HHHc-CCCC--
Confidence 15678999999999999999 69999764221 1111 1111 1100
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
.. ....+ ..+.+++.+|++.+|++|||+.|+++.|+
T Consensus 227 ---~~-~~~~~---~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 ---PK-PEYCP---DELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---CC-CccCC---hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00 11112 34455555999999999999999998873
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-32 Score=270.35 Aligned_cols=229 Identities=17% Similarity=0.215 Sum_probs=163.4
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcC---CCCCCc---------------
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLL---KHPNLE--------------- 338 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~H~ni~--------------- 338 (538)
+|...+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+++++++ +||||.
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 477788999999999999995 468999999987432 2234566787777665 699982
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.+++|||+++ +|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 3699999984 89999887554468999999999999999999999 999999999999999999999999999987
Q ss_pred ccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc--
Q 040267 418 LTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK-- 473 (538)
Q Consensus 418 ~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 473 (538)
.... .++.++|||||||++|||++|+.||......+... .+..+... .....+.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~-~~~~~~~~-~~~~~~~~~ 234 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFDLIGL-PPEDDWPRD 234 (288)
T ss_pred cccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHH-HHHHHhCC-CChhhCccc
Confidence 5321 16788999999999999999999997543221100 01111000 0000000
Q ss_pred -----ccccccccC---CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 -----DVIDKALTG---KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 -----~~~d~~l~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.... ...++....+.+++.+|++.||++|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000 000111223445666999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=271.05 Aligned_cols=201 Identities=18% Similarity=0.272 Sum_probs=157.6
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|+.. +++.||+|.++... ...+.+..|..++..+ +|||| ..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999954 58899999987532 2235577888888877 69999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 81 GDLMFHIQKSR--RFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred chHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence 99999998765 58999999999999999999999 9999999999999999999999999998764210
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||++|+.||...... ....... .+.. . .....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~-~~~~---~----~~~~~ 219 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAIL-NDEV---V----YPTWL 219 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHh-cCCC---C----CCCCC
Confidence 1677899999999999999999999753321 1111111 1111 0 01122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
+.++.++++ +|++.||++||++
T Consensus 220 ~~~~~~li~---~~L~~dP~~R~~~ 241 (320)
T cd05590 220 SQDAVDILK---AFMTKNPTMRLGS 241 (320)
T ss_pred CHHHHHHHH---HHcccCHHHCCCC
Confidence 345555555 9999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-32 Score=264.52 Aligned_cols=232 Identities=19% Similarity=0.234 Sum_probs=172.2
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCC-C-----------------c
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPN-L-----------------E 338 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~n-i-----------------~ 338 (538)
.|...++||+|.||+||+|+ ..+|+.||+|+++.... ......+|+.++++++|+| | .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 45555679999999999999 56799999999975433 3455789999999999999 7 2
Q ss_pred ccEEEeecCCCCHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGN--TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++|+||+.. +|.+++..... ..++...+..++.|+++||+|||+ .+|+||||||.|||++++|.+||+|||+|
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence 2489999976 99999987653 357778899999999999999999 99999999999999999999999999999
Q ss_pred cccCC------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc--cC
Q 040267 417 RLTNG------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS--SG 470 (538)
Q Consensus 417 ~~~~~------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 470 (538)
+...- .|+...||||+||++.||++++.-|.+..+.+. +..-.+.+-. ..
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~q----l~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ----LFRIFRLLGTPNEK 243 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHH----HHHHHHHcCCCCcc
Confidence 85441 188899999999999999999988886544211 1111111100 11
Q ss_pred Cccccc---ccc--c---c-CCCcHHH----HHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHh
Q 040267 471 RIKDVI---DKA--L---T-GKGYDDE----ILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSI 520 (538)
Q Consensus 471 ~~~~~~---d~~--l---~-~~~~~~~----~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i 520 (538)
.+..+. +-. . . ....... .....+++.+|++.+|.+|.|++.++.+ +.++
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 111111 111 0 0 0011110 1245666779999999999999999876 5544
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-32 Score=275.40 Aligned_cols=203 Identities=19% Similarity=0.273 Sum_probs=159.3
Q ss_pred CeEeecCCceEEEEEe----CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 286 NVLVSTWTGTTYKAML----LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
+.||+|+||.||++.. .+|+.||+|+++... .....+.+|++++++++|||| ..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 358899999997532 223457789999999999999 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 82 ~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 82 GGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee
Confidence 999999997654 58999999999999999999999 9999999999999999999999999999864321
Q ss_pred -----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++|||||||++|||++|+.||...... ....... .... .+ ...
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--------~~~~~i~-~~~~------~~-p~~ 220 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--------ETMTMIL-KAKL------GM-PQF 220 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--------HHHHHHH-cCCC------CC-CCC
Confidence 1577999999999999999999999753221 1111111 1111 01 112
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQ 512 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~e 512 (538)
.+..+..+++ +||+.||++||++.+
T Consensus 221 ~~~~~~~li~---~~l~~~P~~R~~a~~ 245 (318)
T cd05582 221 LSPEAQSLLR---ALFKRNPANRLGAGP 245 (318)
T ss_pred CCHHHHHHHH---HHhhcCHhHcCCCCC
Confidence 2344555555 999999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=262.70 Aligned_cols=215 Identities=22% Similarity=0.332 Sum_probs=159.1
Q ss_pred eEeecCCceEEEEEeCC---CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCC
Q 040267 287 VLVSTWTGTTYKAMLLD---GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGT 350 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gs 350 (538)
.||+|+||.||+|...+ ...+|+|.+.... .....+.+|++.++.++|+|| ..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997533 4578999876432 223568899999999999999 3469999999999
Q ss_pred HHHHhhcCCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-------
Q 040267 351 LYSLLHSNGN---TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------- 420 (538)
Q Consensus 351 L~~~l~~~~~---~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------- 420 (538)
|.+++..... ...++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999976432 235688889999999999999999 999999999999999999999999999985311
Q ss_pred -------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 421 -------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 421 -------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
..++.++|||||||++|||++ |..||......+ . ........ ...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----~---~~~~~~~~-~~~ 229 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-----V---LKQVVREQ-DIK 229 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-----H---HHHHhhcc-Ccc
Confidence 014668999999999999999 788887532211 1 11111111 111
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
..++.+.. ..+..... ++..|+ .||++|||++||++.|.
T Consensus 230 ~~~~~~~~-~~~~~~~~---~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQLDL-KYSDRWYE---VMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCcccc-cCCHHHHH---HHHHHh-cCcccccCHHHHHHHhc
Confidence 22222211 12233333 444888 59999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.6e-32 Score=271.86 Aligned_cols=205 Identities=23% Similarity=0.323 Sum_probs=157.3
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
++||+|+||.||+|.. .+++.||+|.++... ...+.+..|..++... +|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 458899999997532 2234456677777654 89999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence 99999997655 58999999999999999999999 9999999999999999999999999999874211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||++|+.||...... ........ .. +.+ ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~-~~------~~~-~~~~ 219 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILN-DR------PHF-PRWI 219 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHc-CC------CCC-CCCC
Confidence 1678899999999999999999999753321 11111111 00 011 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMY-QVY 514 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 514 (538)
+.++.++++ +||+.||++||++. +++
T Consensus 220 ~~~~~~ll~---~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 220 SKEAKDCLS---KLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CHHHHHHHH---HHccCCHHHcCCChHHHH
Confidence 345555555 99999999999875 454
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=265.29 Aligned_cols=210 Identities=18% Similarity=0.263 Sum_probs=158.7
Q ss_pred EeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 288 LVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 288 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
||+|+||+||++.. .+++.||+|.+..... ..+.+..|++++++++|+|| ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 68999999999985 4689999999864321 22457789999999999999 34699999999999
Q ss_pred HHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 352 YSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 352 ~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 9888542 22468999999999999999999999 9999999999999999999999999999864321
Q ss_pred ---------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 422 ---------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 422 ---------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
.++.++||||||+++|||++|+.||....... .......... .... .. ....+
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~-~~~~------~~-~~~~~ 225 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRIL-NDSV------TY-PDKFS 225 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch----hHHHHHHhhc-ccCC------CC-cccCC
Confidence 15778999999999999999999997532211 0011111110 0000 00 11123
Q ss_pred HHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 487 DEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
..+.++ +.+|++.||++|| +++++++
T Consensus 226 ~~~~~l---i~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 226 PASKSF---CEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHH---HHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 344444 4499999999999 6677775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-32 Score=273.43 Aligned_cols=209 Identities=21% Similarity=0.331 Sum_probs=158.9
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHH---hcCCCCCC-----------cccEE
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQV---GLLKHPNL-----------EKPLV 342 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l---~~l~H~ni-----------~~~lv 342 (538)
|...+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|++++ +.++|||| ..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 45678999999999999985 468999999997432 2234566676654 56789999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|..+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 9999999999988653 59999999999999999999999 9999999999999999999999999998764211
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++|||||||++|||++|+.||...... ........ +.. .
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~-~~~------~ 219 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVN-DEV------R 219 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-CCC------C
Confidence 1677899999999999999999999753321 11111111 110 0
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
. ....+..+.+++ .+|++.||++||+ +.++++
T Consensus 220 ~-p~~~~~~~~~li---~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 220 Y-PRFLSREAISIM---RRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred C-CCCCCHHHHHHH---HHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1 111233444444 4999999999994 556554
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=261.23 Aligned_cols=208 Identities=21% Similarity=0.261 Sum_probs=161.7
Q ss_pred CeEeecCCceEEEEEeCC-C----------CEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEe
Q 040267 286 NVLVSTWTGTTYKAMLLD-G----------SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYK 344 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e 344 (538)
+.||+|+||.||+|...+ + ..|++|.+.........+.+|+.++++++|||+ ..++|||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 468999999999999654 3 258888876544336789999999999999999 3368999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-------CeEEEeccCCc
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-------DARIMDFGFSR 417 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-------~~kl~Dfg~a~ 417 (538)
|+++|+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++.
T Consensus 81 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 81 YVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred cCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 9999999999986543 68999999999999999999999 9999999999999999887 79999999987
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.... .++.++||||||+++|||++ |..||...... .+.........
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--------~~~~~~~~~~~---- 224 (259)
T cd05037 157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--------EKERFYQDQHR---- 224 (259)
T ss_pred ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--------hHHHHHhcCCC----
Confidence 5221 25678999999999999999 57777643211 11111111000
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
. ..... ..+.+++.+||..+|++|||+.||++.|
T Consensus 225 ----~-~~~~~---~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 225 ----L-PMPDC---AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ----C-CCCCc---hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 00111 3455566699999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-32 Score=271.35 Aligned_cols=166 Identities=21% Similarity=0.346 Sum_probs=141.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|+.. +++.||+|.++... .....+.+|++++++++|||| ..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888899999999999999954 68899999987432 233567889999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++ +|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 86 LDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 985 8888887654 258899999999999999999999 9999999999999999999999999999864211
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.++.++|||||||++|||+||+.||....
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 15678999999999999999999997643
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.2e-32 Score=264.49 Aligned_cols=221 Identities=20% Similarity=0.248 Sum_probs=168.3
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++.+++++.....||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++|+|| ..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 455677788888999999999999994 457899999987543 334678999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTAL--DWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~ 418 (538)
|+||+++++|.+++..... .+ ++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999986431 34 788899999999999999999 99999999999999986 67999999998764
Q ss_pred cCC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 419 TNG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 419 ~~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
... .++.++||||||+++|||++|+.||...... ....|...... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~-----~~~~~~~~~~~--~-- 229 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP-----QAAMFKVGMFK--I-- 229 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh-----hhhHhhhhhhc--c--
Confidence 311 1567899999999999999999999742211 11111111000 0
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.+ .....+++..+ +.+||+.+|++|||+.|+++
T Consensus 230 ---~~~~-~~~~~~~~~~l---i~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 ---HPEI-PESLSAEAKNF---ILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ---CCCC-CcccCHHHHHH---HHHHcCCCchhCCCHHHHHh
Confidence 0111 11122344444 45999999999999999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.6e-32 Score=271.82 Aligned_cols=206 Identities=24% Similarity=0.318 Sum_probs=158.9
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|... +++.||+|.++... ...+.+..|..++... +|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999954 57899999997532 2234567788888764 89999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05619 81 GDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence 99999998654 58999999999999999999999 999999999999999999999999999886321
Q ss_pred ---------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 421 ---------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
..++.++|||||||++|||++|+.||...... .+...+ .... +.. ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~i----~~~~------~~~-~~~~ 219 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-----ELFQSI----RMDN------PCY-PRWL 219 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-----HHHHHH----HhCC------CCC-CccC
Confidence 11678999999999999999999999753221 111111 1110 111 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHH-HHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMY-QVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~ 515 (538)
+.++.+++. +|++.||++||++. ++.+
T Consensus 220 ~~~~~~li~---~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 220 TREAKDILV---KLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CHHHHHHHH---HHhccCHhhcCCChHHHHc
Confidence 344555555 99999999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=276.52 Aligned_cols=216 Identities=15% Similarity=0.166 Sum_probs=165.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||++.. .+++.||||.+.... ...+.+.+|++++++++|||| ..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688889999999999999984 578999999986432 223567889999999999999 356999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc----
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT---- 419 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~---- 419 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999999999998654 58999999999999999999999 99999999999999999999999999988521
Q ss_pred ------------------------------------------------------C------------CCCCCccCcccHH
Q 040267 420 ------------------------------------------------------N------------GDASLQKDVHGFG 433 (538)
Q Consensus 420 ------------------------------------------------------~------------~~~~~~~DV~S~G 433 (538)
+ ..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0 1167889999999
Q ss_pred HHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCC---CCH
Q 040267 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEK---WSM 510 (538)
Q Consensus 434 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~ 510 (538)
|++|||+||+.||......+ .............+.+ ....+.++.++++ +|+. +|.+| ||+
T Consensus 236 vil~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~----~~~~s~~~~dli~---~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHE--------TYRKIINWRETLYFPD----DIHLSVEAEDLIR---RLIT-NAENRLGRGGA 299 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHH--------HHHHHHccCCccCCCC----CCCCCHHHHHHHH---HHhc-CHhhcCCCCCH
Confidence 99999999999997533211 1111111000000000 0112345556665 8887 66665 699
Q ss_pred HHHHHH
Q 040267 511 YQVYIS 516 (538)
Q Consensus 511 ~evl~~ 516 (538)
.|+++.
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-32 Score=266.03 Aligned_cols=213 Identities=27% Similarity=0.410 Sum_probs=163.4
Q ss_pred CeEeecCCceEEEEEeCC-------CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 286 NVLVSTWTGTTYKAMLLD-------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+.||+|+||.||+|+..+ +..+|+|.+.... ....++.+|+.+++.++|||| ..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998542 2579999886533 335678899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-----CeEEEeccC
Q 040267 346 MSNGTLYSLLHSNG-----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-----DARIMDFGF 415 (538)
Q Consensus 346 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~Dfg~ 415 (538)
+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+++|+||||+||+++.+. .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 2348899999999999999999999 9999999999999999877 899999999
Q ss_pred CcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 416 SRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 416 a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
++... ..++.++||||||+++|||+| |+.||...... .....+ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----~~~~~~----~~ 228 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----EVLQHV----TA 228 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----HHHHHH----hc
Confidence 86321 116778999999999999998 99999743221 111111 11
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
+... . .....+.. +.+++.+||+.+|++||++.+|++.|++
T Consensus 229 ~~~~-----~-~~~~~~~~---~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 229 GGRL-----Q-KPENCPDK---IYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCcc-----C-CcccchHH---HHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1000 0 01112334 4455559999999999999999998863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=268.58 Aligned_cols=216 Identities=20% Similarity=0.268 Sum_probs=165.8
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
|+..+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++++++|+++ ..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 66778999999999999995 468999999986432 122457789999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.......+++.++..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 158 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 158 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccc
Confidence 999999999976554568999999999999999999999 9999999999999999999999999998864321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++|+.||....... ...-....... .. .....
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-----~~~~~~~~~~~--~~----~~~~~- 226 (285)
T cd05630 159 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-----KREEVERLVKE--VQ----EEYSE- 226 (285)
T ss_pred cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-----hHHHHHhhhhh--hh----hhcCc-
Confidence 16778999999999999999999997532210 00001111000 00 01111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
..+.++.++++ +||+.||++||| +.|+++
T Consensus 227 ~~~~~~~~li~---~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 227 KFSPDARSLCK---MLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred cCCHHHHHHHH---HHhhcCHHHccCCCCCchHHHHc
Confidence 12234444444 999999999999 888886
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.8e-32 Score=271.34 Aligned_cols=205 Identities=20% Similarity=0.310 Sum_probs=158.5
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|... +|..||+|.++... ...+.+..|..++... +|||| ..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999954 68899999997532 2234567788888754 89999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 81 GDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence 99999997754 58999999999999999999999 999999999999999999999999999876321
Q ss_pred ---------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 421 ---------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
..++.++|||||||++|||++|+.||...... ....... .. .+.+ ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~-~~------~~~~-~~~~ 219 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIR-VD------TPHY-PRWI 219 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-hC------CCCC-CCCC
Confidence 11678999999999999999999999753321 1111111 11 0111 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMY-QVY 514 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 514 (538)
+.++.++++ +|++.||++||++. +++
T Consensus 220 ~~~~~~li~---~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 220 TKESKDILE---KLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CHHHHHHHH---HHccCCHHHcCCChHHHH
Confidence 345555555 99999999999984 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=272.20 Aligned_cols=166 Identities=23% Similarity=0.330 Sum_probs=142.1
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc--------------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------- 338 (538)
...++|...+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|++++++++||||+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3456789999999999999999984 568899999987532 2235677899999999999982
Q ss_pred ---ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 ---KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 ---~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++++|++ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcc
Confidence 36888887 67999888653 49999999999999999999999 9999999999999999999999999999
Q ss_pred CcccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 416 SRLTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 416 a~~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
++.... .++.++|||||||++|||++|+.||...
T Consensus 165 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 165 ARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred ceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 875322 1567899999999999999999999753
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-32 Score=288.20 Aligned_cols=213 Identities=17% Similarity=0.170 Sum_probs=164.9
Q ss_pred CCCCCeEeecCCceEEEEEeC-C-CCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-D-GSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
|...+.||+|++|.||+|... + +..||+|.+.... .....+.+|+.+++.++|||| ..++||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 777899999999999999843 4 6788999875433 223457889999999999999 3469999999
Q ss_pred CCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 348 NGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 348 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+|+|.++++.. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 99999988653 22358899999999999999999999 9999999999999999999999999999875321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||..... ......... +.... .
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--------~~~~~~~~~-~~~~~-----~ 291 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--------REIMQQVLY-GKYDP-----F 291 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHh-CCCCC-----C
Confidence 167789999999999999999999975322 111211111 11110 0
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.++..++ .+||+.||++||++.+++.
T Consensus 292 -~~~~s~~~~~li---~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 -PCPVSSGMKALL---DPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CccCCHHHHHHH---HHHhccChhhCcCHHHHHh
Confidence 111233444444 4999999999999999875
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=263.95 Aligned_cols=217 Identities=21% Similarity=0.318 Sum_probs=164.5
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+|+..++||+|+||.||+|.. .+++.||+|.+.... ...+++.+|++++.+++|||+ ..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577788999999999999984 568899999986532 234568899999999999999 345899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|..+. .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 152 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKT 152 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccC
Confidence 999997652 37888999999999999999999 9999999999999999999999999999864321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||||+++|||++|+.||.......... ....+....... ..+.+.....
T Consensus 153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~ 225 (279)
T cd06619 153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIVDE------DPPVLPVGQF 225 (279)
T ss_pred CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHhcc------CCCCCCCCcC
Confidence 16778999999999999999999997532211111 111111111110 0111111112
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.++ .+++.+|++.+|++||+++|+++.
T Consensus 226 ~~~~---~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 226 SEKF---VHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CHHH---HHHHHHHhhCChhhCCCHHHHhcC
Confidence 2344 455559999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=260.80 Aligned_cols=215 Identities=21% Similarity=0.315 Sum_probs=169.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
++|+..+.||+|++|.||+|...+ +..+++|.++.... .+++.+|++++++++|+|+ ..++++||++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 578888999999999999999654 88999999875433 6789999999999999999 3468999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+++|.+++.... ..+++..+..++.|++.||.|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 82 ~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (256)
T cd06612 82 AGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN 157 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccccc
Confidence 999999997544 368999999999999999999999 9999999999999999999999999998875332
Q ss_pred -----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++||||||+++|||++|+.||........ ... .... ..+.+. .
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--------~~~-~~~~-----~~~~~~--~ 221 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--------IFM-IPNK-----PPPTLS--D 221 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh--------hhh-hccC-----CCCCCC--c
Confidence 156789999999999999999999975322110 000 0000 000110 0
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.......+.+++.+|++.+|++|||+.||++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 222 PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 1111123445555999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=274.90 Aligned_cols=224 Identities=16% Similarity=0.177 Sum_probs=170.1
Q ss_pred HHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC---------
Q 040267 272 LVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL--------- 337 (538)
Q Consensus 272 ~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni--------- 337 (538)
+.++....++|...+.||+|+||.||++... +++.||+|.+.... ...+.+.+|+.+++.++||||
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455566789999999999999999999954 58899999986422 223457889999999999999
Q ss_pred --cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 338 --EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 338 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
..++||||+++|+|.+++... .++...+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 346999999999999999764 38888999999999999999999 9999999999999999999999999999
Q ss_pred CcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 416 SRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 416 a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
++.... .++.++|||||||++|||++|+.||...... .......
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~ 260 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIM 260 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--------HHHHHHH
Confidence 864321 0467899999999999999999999853321 1111211
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE--KWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 516 (538)
.........+ ....+.++..++. +|++.++.+ ||++.|+++.
T Consensus 261 ~~~~~~~~~~----~~~~s~~~~~li~---~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 261 NHKNSLTFPD----DNDISKEAKNLIC---AFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred cCCCcccCCC----cCCCCHHHHHHHH---HHcCChhhhcCCCCHHHHhcC
Confidence 1111111111 1123445555555 899844433 7899988875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.7e-32 Score=262.33 Aligned_cols=215 Identities=20% Similarity=0.295 Sum_probs=168.4
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC------------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL------------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e 344 (538)
+|+..+.||+|++|.||++.. .+++.||+|.+.... ...+.+.+|++++++++|+|+ ..+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 477788999999999999995 457899999986432 234568899999999999999 1368999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|.+++.......+++.++..++.+++.|++|||+ .+|+|+||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 9999999999987544568999999999999999999999 9999999999999999999999999998864321
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++||||||++++||++|+.||..... ..+..... .+.... ..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--------~~~~~~~~-~~~~~~-----~~ 223 (257)
T cd08223 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--------NSLVYRII-EGKLPP-----MP 223 (257)
T ss_pred ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHH-hcCCCC-----Cc
Confidence 156789999999999999999999974321 12222211 111111 11
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.+ +.+++.+|++.+|++|||+.++++.
T Consensus 224 -~~~~~~---~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 224 -KDYSPE---LGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -cccCHH---HHHHHHHHhccCcccCCCHHHHhcC
Confidence 112234 4455559999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=268.68 Aligned_cols=165 Identities=23% Similarity=0.347 Sum_probs=142.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|+..+.||+|+||.||++.. .++..+|+|.++... ....++.+|++++.+++|||| ..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688889999999999999995 468899999986432 223568899999999999999 34599999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.++++..+ .+++..+..++.|++.||+|||+ ..+++|+||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (308)
T cd06615 81 MDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 156 (308)
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccccc
Confidence 99999999998764 58999999999999999999997 14899999999999999999999999998864321
Q ss_pred -----------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
.++.++||||||+++|||++|+.||..
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 167789999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=268.93 Aligned_cols=206 Identities=21% Similarity=0.300 Sum_probs=161.0
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|... +++.||+|.++... .....+..|.+++..+ +|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999954 58899999997532 2235577898998888 69999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 81 GDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence 99999988765 59999999999999999999999 999999999999999999999999999886321
Q ss_pred ---------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 421 ---------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
..++.++|||||||++|||++|+.||...... ....... .... .. ....
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~-~~~~------~~-~~~~ 219 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSIL-EDEV------RY-PRWL 219 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHH-cCCC------CC-CCcC
Confidence 11678999999999999999999999753221 1111111 1110 00 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSM-----YQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 515 (538)
+.++.++++ +||+.||++|||+ .++++
T Consensus 220 ~~~~~~li~---~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 220 SKEAKSILK---SFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CHHHHHHHH---HHccCCHHHcCCCCCCCHHHHhc
Confidence 344555555 9999999999999 77765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-32 Score=251.15 Aligned_cols=217 Identities=18% Similarity=0.319 Sum_probs=173.1
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-----cc----HHHHHHHHHHHhcC-CCCCC--------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-----LG----EKQFLLEMKQVGLL-KHPNL-------- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-----~~----~~~~~~E~~~l~~l-~H~ni-------- 337 (538)
..-++|...+.+|+|..++|.++.. ++|...|+|++.... .. .+.-..|+.+|+++ .||+|
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3445678889999999999999884 568899999985321 11 24567899999999 59999
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..++|+|.|+.|.|+|++...- .+++....+|++|+..|++|||. +.||||||||+|||+|++.++||+|||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccc
Confidence 3469999999999999998765 68999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCCC----------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 415 FSRLTNGD----------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 415 ~a~~~~~~----------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
+|..+.++ |+..+|.||.||++|-++.|.+||.... . -.+..+
T Consensus 169 Fa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-------Q--mlMLR~ 239 (411)
T KOG0599|consen 169 FACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-------Q--MLMLRM 239 (411)
T ss_pred eeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-------H--HHHHHH
Confidence 99866542 8889999999999999999999998521 1 112233
Q ss_pred hccCCccccccccccCCCc---HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 467 SSSGRIKDVIDKALTGKGY---DDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~---~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.+|++. .+.+.+ ++++++++. +|++.||.+|.|++|+++.
T Consensus 240 ImeGkyq------F~speWadis~~~KdLIs---rlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 240 IMEGKYQ------FRSPEWADISATVKDLIS---RLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHhcccc------cCCcchhhccccHHHHHH---HHHeeCchhcccHHHHhcC
Confidence 3344322 122222 334555555 9999999999999999874
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=264.05 Aligned_cols=216 Identities=22% Similarity=0.266 Sum_probs=164.4
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
|...+.||+|+||+||+|.. .+++.||+|.+.... .....+.+|++++++++|+|+ ..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 55668899999999999995 468999999986532 123457889999999999999 34599999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
+++|+|.+++...+...+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI 158 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc
Confidence 999999999876544469999999999999999999999 999999999999999999999999999885431
Q ss_pred -----------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 421 -----------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 421 -----------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
..++.++||||||+++|||++|+.||....... ...-+........ . ....
T Consensus 159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-----~~~~~~~~~~~~~--~----~~~~- 226 (285)
T cd05632 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-----KREEVDRRVLETE--E----VYSA- 226 (285)
T ss_pred cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHhhhccc--c----ccCc-
Confidence 116778999999999999999999997532211 0111111111110 0 0111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
..+.++. +++..|++.||++||+ +.++++
T Consensus 227 ~~~~~~~---~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 227 KFSEEAK---SICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cCCHHHH---HHHHHHccCCHhHcCCCcccChHHHHc
Confidence 1223444 4555999999999999 556665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=270.17 Aligned_cols=202 Identities=20% Similarity=0.264 Sum_probs=155.6
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHH-HHhcCCCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMK-QVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|.. .+|+.||+|.+.... ....++..|.. +++.++|||| ..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999995 468999999996432 12234555554 5678999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 81 GELFFHLQRER--SFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence 99999998654 68999999999999999999999 9999999999999999999999999998864211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||++|+.||...... +....... +.. .+.. ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~-~~~------~~~~-~~ 219 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA--------EMYDNILN-KPL------RLKP-NI 219 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH--------HHHHHHHc-CCC------CCCC-CC
Confidence 1678899999999999999999999753221 11111111 110 1111 12
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMY 511 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~ 511 (538)
+..+.++++ +|++.||.+||++.
T Consensus 220 ~~~~~~li~---~~l~~~p~~R~~~~ 242 (323)
T cd05575 220 SVSARHLLE---GLLQKDRTKRLGAK 242 (323)
T ss_pred CHHHHHHHH---HHhhcCHHhCCCCC
Confidence 344555555 99999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=264.00 Aligned_cols=212 Identities=17% Similarity=0.231 Sum_probs=168.2
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.|+..+.||.|+||.||+|... ++..||+|.++... .....+.+|++++++++|+|+ ..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4666788999999999999954 58899999987432 234678899999999999999 357999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.+++... .+++.+...++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 85 ~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06640 85 GGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc
Confidence 999999998754 48899999999999999999999 9999999999999999999999999999864321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
..+.++||||||+++|||+||+.||....... ... ...... ...
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~-~~~~~~---------~~~ 220 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------VLF-LIPKNN---------PPT 220 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------Hhh-hhhcCC---------CCC
Confidence 15778999999999999999999997532211 000 000000 111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
........+.+++.+||+.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 122334455666679999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=270.51 Aligned_cols=206 Identities=22% Similarity=0.287 Sum_probs=159.0
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCC-CCCC-----------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLK-HPNL-----------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~ 343 (538)
+|...+.||+|+||.||+|... +++.||+|.++... ...+.+..|..++..+. |+++ ..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999954 57899999987532 12245677888888774 7776 246999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999997655 58999999999999999999999 9999999999999999999999999999874210
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||+||+.||...... .+. .... .... ..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-----~~~---~~i~-~~~~------~~ 220 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELF---QSIM-EHNV------AY 220 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-----HHH---HHHH-hCCC------CC
Confidence 1678999999999999999999999753321 111 1111 1110 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
....+.++..++ .+|++.||++|++.
T Consensus 221 -p~~~s~~~~~li---~~~l~~~p~~R~~~ 246 (323)
T cd05616 221 -PKSMSKEAVAIC---KGLMTKHPGKRLGC 246 (323)
T ss_pred -CCcCCHHHHHHH---HHHcccCHHhcCCC
Confidence 111233444444 49999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=276.81 Aligned_cols=216 Identities=16% Similarity=0.172 Sum_probs=164.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++.+++|+|| ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688889999999999999994 468999999986432 224568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc----
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT---- 419 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~---- 419 (538)
||+++|+|.+++...+ .+++.....++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++..+
T Consensus 81 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999998765 58899999999999999999999 99999999999999999999999999986311
Q ss_pred --------------------------------------------------C------------CCCCCccCcccHHHHHH
Q 040267 420 --------------------------------------------------N------------GDASLQKDVHGFGVVLL 437 (538)
Q Consensus 420 --------------------------------------------------~------------~~~~~~~DV~S~Gvvl~ 437 (538)
+ ..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0 11677899999999999
Q ss_pred HHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCC---CHHHHH
Q 040267 438 ELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW---SMYQVY 514 (538)
Q Consensus 438 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP---s~~evl 514 (538)
||++|+.||......+ +............+ +. ....+.+..+++. +|+ .+|.+|+ |+.|++
T Consensus 236 ell~G~~Pf~~~~~~~--------~~~~i~~~~~~~~~--~~--~~~~s~~~~~li~---~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 236 EMLVGQPPFLADTPAE--------TQLKVINWETTLHI--PS--QAKLSREASDLIL---RLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred ehhhCCCCCCCCCHHH--------HHHHHhccCccccC--CC--CCCCCHHHHHHHH---HHh-cCHhhcCCCCCHHHHh
Confidence 9999999998543211 11111110000000 00 0112334444444 655 4999999 889988
Q ss_pred HH
Q 040267 515 IS 516 (538)
Q Consensus 515 ~~ 516 (538)
+.
T Consensus 300 ~h 301 (376)
T cd05598 300 AH 301 (376)
T ss_pred CC
Confidence 64
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=274.25 Aligned_cols=166 Identities=22% Similarity=0.263 Sum_probs=141.4
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc--------------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------- 338 (538)
...++|...+.||+|+||.||++.. ..++.||||.+.... ...+.+.+|+.+++.++||||.
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3456899999999999999999984 468899999997532 2235678899999999999991
Q ss_pred ---ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 ---KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 ---~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 3699999975 67777653 48899999999999999999999 9999999999999999999999999999
Q ss_pred CcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 416 SRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 416 a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
++.... .++.++|||||||++|||++|+.||....
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 222 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 975432 16788999999999999999999997543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=262.67 Aligned_cols=226 Identities=22% Similarity=0.292 Sum_probs=170.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
++|...+.||.|++|.||++.. .+++.+|+|.+..... ...++.+|++++++++|||| ..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3577788999999999999996 4588999999875332 34678999999999999999 236899
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||+++++|.+++... ....+++.....++.|++.||+|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987642 22458899999999999999999999 9999999999999999999999999999764221
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++||||||+++|||++|+.||...............+... .....+.+...
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 233 (287)
T cd06621 158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPELKDEPG 233 (287)
T ss_pred cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhhccCCC
Confidence 16778999999999999999999998543211111122222221 11111111110
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....++. +.+++.+||+.+|++|||+.||++
T Consensus 234 ~~~~~~~~---~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 234 NGIKWSEE---FKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCchHHH---HHHHHHHHcCCCcccCCCHHHHHh
Confidence 01112334 445555999999999999999987
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=277.10 Aligned_cols=162 Identities=17% Similarity=0.238 Sum_probs=138.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC---CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------ccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL---DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e 344 (538)
..+|...+.||+|+||.||++... .+..||+|.+... ....+|++++++++||||+ .+++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 346889999999999999999743 3578999988653 2456899999999999993 358999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+. ++|.+++.... .+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 167 ~~~-~~l~~~l~~~~--~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 167 KYK-CDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hcC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 986 68999885443 69999999999999999999999 9999999999999999999999999999864321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.++.++|||||||++|||++|+.||....
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 16778999999999999999999997643
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-32 Score=273.57 Aligned_cols=162 Identities=20% Similarity=0.221 Sum_probs=136.4
Q ss_pred CCeEeec--CCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 285 QNVLVST--WTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 285 ~~~ig~G--~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.++||+| +|++||++.. .+|+.||+|+++... ...+.+.+|+++++.++|||| ..++|+||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 6789999984 578999999997532 223457789999999999999 3468999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------- 420 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------- 420 (538)
+|+|.+++.......+++..+.+++.|++.||+|||+ .+|+||||||+||+++.++.++++||+......
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 9999999976544468999999999999999999999 999999999999999999999999987532110
Q ss_pred -------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 421 -------------------------GDASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 421 -------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 12568899999999999999999999753
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=258.01 Aligned_cols=215 Identities=20% Similarity=0.301 Sum_probs=169.2
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc---cccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||+|+||.+|++.. .+++.||+|.+... ....+++.+|+.++++++|||+ ..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477788999999999999984 56899999998642 2234578999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++.......+++.++.+++.|++.|++|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 999999999986544468999999999999999999999 9999999999999999999999999998864322
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
..+.++||||||++++||++|+.||.... ....+..... +.... . .
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~~-~~~~~-----~-~ 222 (256)
T cd08218 158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN--------MKNLVLKIIR-GSYPP-----V-S 222 (256)
T ss_pred hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC--------HHHHHHHHhc-CCCCC-----C-c
Confidence 15678999999999999999999997422 1222222211 11110 0 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.+ +.+++.+||+.+|++||++.+|++.
T Consensus 223 ~~~~~~---~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 223 SHYSYD---LRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ccCCHH---HHHHHHHHhhCChhhCcCHHHHhhC
Confidence 112233 4445559999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=292.25 Aligned_cols=224 Identities=23% Similarity=0.269 Sum_probs=170.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...++||+|+||.||+|.. .+++.||+|+++... ...+++.+|++++++++|||| ..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4688889999999999999995 468999999997532 224578999999999999999 346899
Q ss_pred eecCCCCHHHHhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 344 KYMSNGTLYSLLHSNG---------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
||+++|+|.+++.... ...+++..+++++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 1346778889999999999999999 999999999999999999999999999
Q ss_pred CCcccC-----------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccc
Q 040267 415 FSRLTN-----------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEE 453 (538)
Q Consensus 415 ~a~~~~-----------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~ 453 (538)
+++... ..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 987540 015778999999999999999999997522111
Q ss_pred cccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHhHH
Q 040267 454 GYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-SMYQVYISLCSIAE 522 (538)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~i~~ 522 (538)
+. +. ... .++.-.. ...+....+.+++.+|++.||++|| +++++.+.|+...+
T Consensus 239 -----i~-~~------~~i---~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 -----IS-YR------DVI---LSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred -----hh-hh------hhc---cChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00 00 000 0000000 0011122344566699999999995 67778888887654
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=258.85 Aligned_cols=214 Identities=19% Similarity=0.324 Sum_probs=166.8
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc-------cHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-------GEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|...+.||+|+||.||+|...+++.+|+|.++.... ....+.+|++++++++|+|| ..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4777889999999999999988899999999864321 12458899999999999998 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-- 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-- 420 (538)
+||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999997654 58899999999999999999999 899999999999999999999999999876421
Q ss_pred ---------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 421 ---------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 421 ---------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
..++.++||||||+++|||++|+.||......+ ...........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~-- 226 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-------AMFYIGAHRGL-- 226 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-------HHHHhhhccCC--
Confidence 015678999999999999999999997432111 00000000000
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.+. ...+.++..+++ +||+.+|++||++.|+++
T Consensus 227 ---~~~~~-~~~~~~~~~~i~---~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 ---MPRLP-DSFSAAAIDFVT---SCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---CCCCC-CCCCHHHHHHHH---HHhcCCcccCCCHHHHhc
Confidence 11111 123344555555 999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=266.56 Aligned_cols=213 Identities=19% Similarity=0.329 Sum_probs=167.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.+|...+.||+|++|.||+|.. .+++.||+|.+.... ...+.+.+|+.+++.++|+|+ ..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5688889999999999999994 579999999997533 334668899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|.+++... .+++.++..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++.....
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 172 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc
Confidence 999999999754 48999999999999999999999 9999999999999999999999999998764321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc-C
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT-G 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~ 482 (538)
.++.++|||||||++|++++|+.||......... ......+ .+... .
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~--------~~~~~~~------~~~~~~~ 238 (297)
T cd06656 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL--------YLIATNG------TPELQNP 238 (297)
T ss_pred CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe--------eeeccCC------CCCCCCc
Confidence 1567899999999999999999999753321100 0000000 00000 0
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+..+ .+++.+||+.+|++||++.+|++
T Consensus 239 ~~~~~~~---~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 239 ERLSAVF---RDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cccCHHH---HHHHHHHccCChhhCcCHHHHhc
Confidence 1122333 44555999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=272.97 Aligned_cols=164 Identities=24% Similarity=0.305 Sum_probs=140.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE--------------- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~--------------- 338 (538)
..++|...+.||+|+||.||++.. .+|..||+|.+.... ....++.+|+.+++.++||||.
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 346899999999999999999985 468999999996432 2345688999999999999981
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 3699999975 67766643 47889999999999999999999 99999999999999999999999999998
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
+.... .++.++|||||||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 171 RTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 64321 1678899999999999999999999854
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=261.77 Aligned_cols=213 Identities=20% Similarity=0.267 Sum_probs=163.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc------ccHHHHHHHHHHHhcCCCCCC-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK------LGEKQFLLEMKQVGLLKHPNL-------------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~H~ni-------------~~ 339 (538)
.+|...+.||+|+||.||+|.. .++..||+|.+.... .....+.+|+.++++++|||| ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4788999999999999999985 468999999986422 112458889999999999999 13
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++++||+++++|.+++.... .+++.....++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 57999999999999998655 58999999999999999999999 99999999999999999999999999988632
Q ss_pred CC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. .++.++|||||||++|||++|+.||..... ...+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--------~~~~~~~~~~~--- 225 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--------MAAIFKIATQP--- 225 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--------HHHHHHHhcCC---
Confidence 11 146789999999999999999999974221 11111111110
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+.+ +. .....++.+++||..+|++||+++||++
T Consensus 226 --~~~~~----~~-~~~~~~~~li~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 --TNPQL----PS-HISEHARDFLGCIFVEARHRPSAEELLR 260 (266)
T ss_pred --CCCCC----ch-hcCHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 01111 11 1112222233688899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=272.95 Aligned_cols=165 Identities=21% Similarity=0.274 Sum_probs=141.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE--------------- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~--------------- 338 (538)
..++|...+.||+|+||.||++.. ..++.||||++.... ...+.+.+|+.+++.++||||.
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 356799999999999999999994 468899999997532 2345688999999999999991
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.|+||||+++ +|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 3699999975 78777753 47899999999999999999999 99999999999999999999999999999
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.... .++.++|||||||++|||++|+.||....
T Consensus 174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 229 (364)
T cd07875 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229 (364)
T ss_pred cccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence 75432 16789999999999999999999997543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=263.90 Aligned_cols=220 Identities=21% Similarity=0.295 Sum_probs=171.5
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC----------c------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL----------E------ 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni----------~------ 338 (538)
.++++|+..+.||+|++|.||+|... +++.+++|.+.......+++.+|+.+++++ .|+|+ .
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 45688999999999999999999964 578999999986655567899999999999 69998 1
Q ss_pred -ccEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++||||+++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 479999999999999987533 3478999999999999999999999 9999999999999999999999999998
Q ss_pred CcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 416 SRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 416 a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
+..... .++.++||||||+++|||++|+.||....... .+ ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~----~~~~ 231 (275)
T cd06608 160 SAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR----AL----FKIP 231 (275)
T ss_pred ceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH----HH----HHhh
Confidence 753211 14568999999999999999999997422110 01 1111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. .. .+.+.. .......+.+++.+|++.||++|||+.++++
T Consensus 232 ~-~~-----~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 R-NP-----PPTLKS--PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred c-cC-----CCCCCc--hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 10 011111 1112223444555999999999999999976
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=268.41 Aligned_cols=208 Identities=17% Similarity=0.221 Sum_probs=159.2
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|.. .+++.||+|.++... ...+.+.+|+.++.++ +|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999995 458899999997532 2234578899999888 69998 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 81 GDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence 99999887654 59999999999999999999999 999999999999999999999999999886421
Q ss_pred ---------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 421 ---------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
..++.++|||||||++|||++|+.||........ .....+.......... .+ ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~------~~-p~~~ 226 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD--MNTEDYLFQVILEKPI------RI-PRFL 226 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc--cccHHHHHHHHHhCCC------CC-CCCC
Confidence 1167899999999999999999999974332211 1122222222221111 01 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
+..+.++++ +|++.||++||++
T Consensus 227 ~~~~~~li~---~~L~~dP~~R~~~ 248 (327)
T cd05617 227 SVKASHVLK---GFLNKDPKERLGC 248 (327)
T ss_pred CHHHHHHHH---HHhccCHHHcCCC
Confidence 344455555 9999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=262.90 Aligned_cols=219 Identities=22% Similarity=0.344 Sum_probs=169.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|.....||+|+||.||+|+.. +...|++|.+..... ..+++.+|++++++++|+|+ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46788889999999999999953 246799999865433 24679999999999999998 346
Q ss_pred EEEeecCCCCHHHHhhcCCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 341 LVYKYMSNGTLYSLLHSNGN-------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999976541 258999999999999999999999 99999999999999999999999999
Q ss_pred cCCcccC------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhc
Q 040267 414 GFSRLTN------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 414 g~a~~~~------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
|+++... ...+.++||||||+++|||++ |..||...... .+... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-----~~~~~----~~ 232 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-----EVLNR----LQ 232 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-----HHHHH----HH
Confidence 9976321 115678999999999999999 88888642211 11111 11
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
.+...... ....+.. +.+++.+|++.+|++|||+.|+++.|.
T Consensus 233 ~~~~~~~~-----~~~~~~~---l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 AGKLELPV-----PEGCPSR---LYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCcCCCC-----CCCCCHH---HHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11111000 1112234 445555999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=264.62 Aligned_cols=165 Identities=20% Similarity=0.290 Sum_probs=141.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||+|++|.||+|+. .++..||+|.++... ...+.+.+|+.++++++|||+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477788999999999999995 468999999986432 224678899999999999999 34689999
Q ss_pred cCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 346 MSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
++ ++|.+++.... ...+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++.....
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 68999887543 2468999999999999999999999 9999999999999999999999999998763210
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++||||||+++|||+||+.||...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 1467899999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=267.52 Aligned_cols=219 Identities=16% Similarity=0.153 Sum_probs=165.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+++. .+++.||+|.+.+.. ...+.+.+|+.++..++|+|| ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688889999999999999995 458999999986422 223558899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 9999999999997633 258999999999999999999999 9999999999999999999999999999754211
Q ss_pred ---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 ---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++|||||||++|||++|+.||..... .+.............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~~~ 228 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNHKEHFQ 228 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCCccc
Confidence 135689999999999999999999975322 111222221111111
Q ss_pred cccccccCCCcHHHHHHHHHHHhHcc--CCCCCCCCCHHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCV--AVRPKEKWSMYQVYIS 516 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl--~~dP~~RPs~~evl~~ 516 (538)
+ .+. ....++.+..+++ +|+ ..++..||++.++++.
T Consensus 229 ~-~~~--~~~~~~~~~~li~---~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 F-PPD--VTDVSEEAKDLIR---RLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred C-CCc--cCCCCHHHHHHHH---HHccCcccccCCCCHHHHhcC
Confidence 1 000 1123455666666 554 4455558899998875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=268.20 Aligned_cols=206 Identities=20% Similarity=0.298 Sum_probs=159.2
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCC-CCC-----------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKH-PNL-----------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H-~ni-----------~~~lv~ 343 (538)
+|+..+.||+|+||.||+|.. .+++.||+|.++... ...+.+..|..++..+.| +++ ..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467778999999999999995 468999999997532 223457789999988865 555 246999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999999997765 59999999999999999999999 9999999999999999999999999998864210
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||...... .+ ...... ... ..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~---~~~i~~-~~~------~~ 220 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-----EL---FQSIME-HNV------SY 220 (323)
T ss_pred ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-----HH---HHHHHh-CCC------CC
Confidence 1678899999999999999999999753321 11 111111 110 00
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
. ...+.++. +++.+|++.+|++|++.
T Consensus 221 p-~~~~~~~~---~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 221 P-KSLSKEAV---SICKGLMTKHPSKRLGC 246 (323)
T ss_pred C-ccCCHHHH---HHHHHHcccCHhhCCCC
Confidence 0 11223444 45559999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=265.56 Aligned_cols=225 Identities=20% Similarity=0.297 Sum_probs=171.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|+..+.||+|+||.||++.. .+++.||+|.+.... ...+++.+|+++++.++|||| ..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 3566678899999999999995 468899999886432 234678999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
+++|+|.+++...+ .+++.....++.+++.||.|||+ ..+++|+||||+||++++++.++|+|||++....
T Consensus 85 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~ 160 (284)
T cd06620 85 MDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIAD 160 (284)
T ss_pred CCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccC
Confidence 99999999987754 58999999999999999999996 2479999999999999999999999999876421
Q ss_pred ----------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccc---cccHHHHHHHHhccCCcccccccccc
Q 040267 421 ----------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGY---KGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 421 ----------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
..++.++|||||||++||++||+.||......+.. ...+..+........ .+.+.
T Consensus 161 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 234 (284)
T cd06620 161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------PPRLP 234 (284)
T ss_pred ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------CCCCC
Confidence 11577999999999999999999999854432111 112223333222111 01111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
. ......+.+++.+|++.||++|||+.||++..
T Consensus 235 ~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 235 S---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred c---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 1 11223345555699999999999999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=264.07 Aligned_cols=208 Identities=19% Similarity=0.238 Sum_probs=157.1
Q ss_pred eEeecCCceEEEEEeCC-------------------------CCEEEEEEcccccc-cHHHHHHHHHHHhcCCCCCC---
Q 040267 287 VLVSTWTGTTYKAMLLD-------------------------GSMLAIKRLSACKL-GEKQFLLEMKQVGLLKHPNL--- 337 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~-------------------------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~ni--- 337 (538)
.||+|+||.||+|.+.. ...||+|.+..... ...++.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999998421 13589999865332 23568889999999999999
Q ss_pred --------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---
Q 040267 338 --------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF--- 406 (538)
Q Consensus 338 --------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~--- 406 (538)
..++||||+++|+|..++.... ..+++..+.+++.|+++||+|||+ .+|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCccc
Confidence 3469999999999999987543 268999999999999999999999 9999999999999997643
Q ss_pred ----CeEEEeccCCcccC--------------------CCCCCccCcccHHHHHHHHH-hCCCCCCCCcccccccccHHH
Q 040267 407 ----DARIMDFGFSRLTN--------------------GDASLQKDVHGFGVVLLELV-TGQKPFEINASEEGYKGNLVN 461 (538)
Q Consensus 407 ----~~kl~Dfg~a~~~~--------------------~~~~~~~DV~S~Gvvl~ell-tg~~p~~~~~~~~~~~~~~~~ 461 (538)
.+|++|||.+.... ..++.++||||||+++||++ +|+.||......+ ...
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~ 232 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE-----KER 232 (274)
T ss_pred CccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-----HHH
Confidence 37999999875321 12577899999999999995 6999987532211 111
Q ss_pred HHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
+.. .. ...... ... .+.+++.+||+.+|++|||+.+|++.|+
T Consensus 233 ~~~----~~-------~~~~~~-~~~---~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 233 FYE----KK-------HRLPEP-SCK---ELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHH----hc-------cCCCCC-CCh---HHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 111 00 001111 112 3455666999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=258.01 Aligned_cols=215 Identities=19% Similarity=0.330 Sum_probs=159.4
Q ss_pred eEeecCCceEEEEEeCCC---CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCC
Q 040267 287 VLVSTWTGTTYKAMLLDG---SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGT 350 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gs 350 (538)
.||+|+||.||+|...++ ..+++|.++... ...+.+.+|+.+++.++|||+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985443 356777766432 234679999999999999999 3469999999999
Q ss_pred HHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--------
Q 040267 351 LYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-------- 420 (538)
Q Consensus 351 L~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------- 420 (538)
|.++++... ....++.....++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999998643 2346777888999999999999999 999999999999999999999999999875310
Q ss_pred -----------C-------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 421 -----------G-------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 421 -----------~-------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
+ .++.++||||||+++|||++ |..||..... .+........ .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~~~~~~~~-~~~~~ 229 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--------REVLNHVIKD-QQVKL 229 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHhh-ccccc
Confidence 0 02568999999999999997 5678864322 1122222221 22233
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
.++.+... .++....++ ..|| .+|++||+++||++.|.
T Consensus 230 ~~~~~~~~-~~~~~~~l~---~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLELP-YSERWYEVL---QFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCCC-CcHHHHHHH---HHHh-hCcccCCCHHHHHHHhc
Confidence 34443322 233444444 4899 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=261.72 Aligned_cols=230 Identities=21% Similarity=0.321 Sum_probs=167.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|+..+.||+|++|.||+|... +++.||+|++.... ...+.+.+|++++++++|+|+ ..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36788899999999999999965 58999999986432 223568899999999999998 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|..++.... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999998888876544 58999999999999999999999 9999999999999999999999999999874321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHH-------HHhccCCc-
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWID-------QLSSSGRI- 472 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~- 472 (538)
.++.++||||||+++|||++|+.||......+... .+..... ........
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY-LIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCChHHhhhccccccc
Confidence 15678999999999999999999997543221100 0000000 00000000
Q ss_pred cccccccccCCCc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 473 KDVIDKALTGKGY-----DDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 473 ~~~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+....... +.....+.+++.+|++.+|++|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000000000 011234556666999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=260.80 Aligned_cols=212 Identities=21% Similarity=0.361 Sum_probs=165.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc----------HHHHHHHHHHHhcCCCCCC-----------c
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG----------EKQFLLEMKQVGLLKHPNL-----------E 338 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~----------~~~~~~E~~~l~~l~H~ni-----------~ 338 (538)
+|.....||+|++|.||+|.. .+++.||+|.+...... .+.+.+|+.++++++|||| .
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 366778999999999999985 46889999988643211 1457889999999999998 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++++||+++++|.+++...+ .+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 469999999999999998764 58999999999999999999999 9999999999999999999999999998764
Q ss_pred cCC-----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 419 TNG-----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 419 ~~~-----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
... .++.++||||||+++|||++|+.||....... -+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~- 226 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--------AIFKIGE- 226 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--------HHHHHhc-
Confidence 431 14568999999999999999999997532110 0111000
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.+.. ..+..+..+++ +||+.||.+||++.||++
T Consensus 227 -----~~~~~~~~-~~~~~~~~li~---~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 -----NASPEIPS-NISSEAIDFLE---KTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----cCCCcCCc-ccCHHHHHHHH---HHccCCchhCcCHHHHhh
Confidence 11111111 12334444555 999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-32 Score=277.14 Aligned_cols=211 Identities=24% Similarity=0.363 Sum_probs=168.5
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccc-----ccccHHHHHHHHHHHhcCCCCCCccc-------------EEEee
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSA-----CKLGEKQFLLEMKQVGLLKHPNLEKP-------------LVYKY 345 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~-----~~~~~~~~~~E~~~l~~l~H~ni~~~-------------lv~e~ 345 (538)
..+||+|+|-+||+|.. .+|..||.-.++. .....++|..|+.+|+.|+||||+++ +|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 36799999999999994 4688888665542 22334789999999999999999443 89999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCcccCCC--
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~-- 422 (538)
|..|+|..|+++.+ .++......|++||++||.|||+ ..++|||||||..||+|+.+ |.+||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred ccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 99999999999887 58899999999999999999998 45899999999999999865 89999999999865432
Q ss_pred ------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 423 ------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 423 ------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
|++.+||||||+.++||+|+..||....... . +.+.+-+|.-...+. ..
T Consensus 202 ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A-------Q-IYKKV~SGiKP~sl~-----kV 268 (632)
T KOG0584|consen 202 KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA-------Q-IYKKVTSGIKPAALS-----KV 268 (632)
T ss_pred ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHH-------H-HHHHHHcCCCHHHhh-----cc
Confidence 8999999999999999999999998654321 1 122222222111111 11
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+++.+++ +|+.. .++|||+.|+++
T Consensus 269 ~dPevr~fIe---kCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 269 KDPEVREFIE---KCLAT-KSERLSAKELLK 295 (632)
T ss_pred CCHHHHHHHH---HHhcC-chhccCHHHHhh
Confidence 2347777787 99999 999999999986
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=256.05 Aligned_cols=215 Identities=20% Similarity=0.333 Sum_probs=169.3
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||.|+||.||.++ ..+++.+++|.+.... ...+++.+|++++++++|+|| ..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 47778999999999999998 4568899999886432 334678899999999999999 34689999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.......+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 157 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM 157 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence 999999999987644468999999999999999999999 8999999999999999999999999998874321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
..+.++||||||+++|||++|+.||..... .+.+.... .+......
T Consensus 158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~-~~~~~~~~------ 222 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--------LNLVVKIV-QGNYTPVV------ 222 (256)
T ss_pred ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHH-cCCCCCCc------
Confidence 156789999999999999999999975322 12222211 11111110
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.++. +++.+||+.+|++||++.|+++.
T Consensus 223 ~~~~~~~~---~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 223 SVYSSELI---SLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred cccCHHHH---HHHHHHcccCcccCCCHHHHhhC
Confidence 11223444 45559999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=266.25 Aligned_cols=166 Identities=23% Similarity=0.362 Sum_probs=141.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|+.. +++.||+|.++... .....+.+|+.++++++|||| ..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46788899999999999999854 68899999986432 234567899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
++ ++|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++.....
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 97 59999887654 258899999999999999999999 9999999999999999999999999998864221
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.++.++|||||||++|||+||+.||....
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 15668999999999999999999997543
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=262.77 Aligned_cols=230 Identities=19% Similarity=0.252 Sum_probs=167.4
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc------cHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL------GEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|+..+.||+|++|.||+|.. .+++.||+|.++.... ....+.+|++++++++|+|+ ..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 367778999999999999995 4689999999975432 23457789999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+ +|+|.+++.... ..+++..+..++.|+++||+|||+ .+|+|+||||+||+++.++.+||+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999997654 369999999999999999999999 9999999999999999999999999998874421
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH-----HhccCCcc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ-----LSSSGRIK 473 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 473 (538)
.++.++|||||||++|||++|..||......+... .+...... ........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLG-KIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHH-HHHHHcCCCchhhhhhccccc
Confidence 14678999999999999999987776533211100 00000000 00000000
Q ss_pred ccccccccCCC-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 474 DVIDKALTGKG-----YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 474 ~~~d~~l~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
........... .......+.+++.+||+.+|++|||+.||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 11100000000 01122345566669999999999999999873
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=269.29 Aligned_cols=207 Identities=20% Similarity=0.269 Sum_probs=157.6
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHH-HHhcCCCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMK-QVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|.. .+|+.||+|.+.... ....++..|.. +++.++|||| ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999994 568999999996432 22344556655 4677999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|..++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (325)
T cd05604 81 GELFFHLQRER--SFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT 155 (325)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence 99999987655 68999999999999999999999 9999999999999999999999999999874211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||++|+.||...... +....... +.. .+.. ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~~~~-~~~------~~~~-~~ 219 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--------EMYDNILH-KPL------VLRP-GA 219 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--------HHHHHHHc-CCc------cCCC-CC
Confidence 1678999999999999999999999753221 11111111 110 0111 12
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+..+.++++ +|++.+|.+||++.+.++.
T Consensus 220 ~~~~~~ll~---~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 220 SLTAWSILE---ELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred CHHHHHHHH---HHhccCHHhcCCCCCCHHH
Confidence 334444555 9999999999998644433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=273.68 Aligned_cols=164 Identities=21% Similarity=0.201 Sum_probs=142.3
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.|...+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|++++++++|+|| ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 577889999999999999994 568899999997532 223568899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc-----
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT----- 419 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~----- 419 (538)
|+++|+|.+++...+ .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++...
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999999997654 58899999999999999999999 99999999999999999999999999986311
Q ss_pred -----------------------------------------------------------------CCCCCCccCcccHHH
Q 040267 420 -----------------------------------------------------------------NGDASLQKDVHGFGV 434 (538)
Q Consensus 420 -----------------------------------------------------------------~~~~~~~~DV~S~Gv 434 (538)
...++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 011678899999999
Q ss_pred HHHHHHhCCCCCCCC
Q 040267 435 VLLELVTGQKPFEIN 449 (538)
Q Consensus 435 vl~elltg~~p~~~~ 449 (538)
++|||++|+.||...
T Consensus 237 il~elltG~~Pf~~~ 251 (382)
T cd05625 237 ILYEMLVGQPPFLAQ 251 (382)
T ss_pred HHHHHHhCCCCCCCC
Confidence 999999999999854
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=258.69 Aligned_cols=208 Identities=18% Similarity=0.261 Sum_probs=157.5
Q ss_pred CeEeecCCceEEEEEeCC-------------CCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 286 NVLVSTWTGTTYKAMLLD-------------GSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-------------~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
+.||+|+||.||+|++.+ ...||+|.+.... .....+.+|+.+++.++|||| ..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2258999886543 234568889999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC-------eEEEec
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD-------ARIMDF 413 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-------~kl~Df 413 (538)
+||||+++|+|..++.... ..+++..+.+++.||+.||+|||+ .+|+||||||+|||++.++. +|++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999887543 258999999999999999999999 99999999999999987654 899999
Q ss_pred cCCcccC--------------------CCCCCccCcccHHHHHHHHH-hCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 414 GFSRLTN--------------------GDASLQKDVHGFGVVLLELV-TGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 414 g~a~~~~--------------------~~~~~~~DV~S~Gvvl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
|++.... ..++.++|||||||++|||+ +|+.|+......+ . ..... +..
T Consensus 157 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--------~-~~~~~-~~~ 226 (262)
T cd05077 157 GIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--------K-ERFYE-GQC 226 (262)
T ss_pred CCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--------H-HHHHh-cCc
Confidence 9886432 12667899999999999998 5888886422110 0 01111 110
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
. . .....++ +.+++.+||+.||.+||++.+|++.+
T Consensus 227 ~-~------~~~~~~~---~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 227 M-L------VTPSCKE---LADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred c-C------CCCChHH---HHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 0 0111233 44555599999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=262.84 Aligned_cols=212 Identities=21% Similarity=0.307 Sum_probs=167.0
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+|+..+.||.|++|.||+|... +++.||+|.+.... .....+.+|+++++.++|+|+ ..++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5777789999999999999954 68899999986532 233568899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|.+++... .+++..+..++.|++.|+.|||+ .+++|+||+|+||++++++.++|+|||+++....
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 155 (274)
T cd06609 82 GGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR 155 (274)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeeccccccc
Confidence 999999999865 58999999999999999999999 9999999999999999999999999998865331
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||+||+.||...... ..... ..... .+.+...
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~-~~~~~-----~~~~~~~ 221 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFL-IPKNN-----PPSLEGN 221 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHH-hhhcC-----CCCCccc
Confidence 1578899999999999999999999743211 11111 11111 1111111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+.. +.+++.+|+..+|++|||++++++
T Consensus 222 ~~~~~---~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 KFSKP---FKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccCHH---HHHHHHHHhhCChhhCcCHHHHhh
Confidence 12233 444555999999999999999976
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=267.93 Aligned_cols=206 Identities=19% Similarity=0.258 Sum_probs=156.7
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHH-HHhcCCCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMK-QVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|+||.||+|... +++.||+|.+.... ....++..|.. +++.++|||| ..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999954 57899999986432 12234444444 5678899999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 81 GELFYHLQRER--CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence 99999998755 58888899999999999999999 9999999999999999999999999999864211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||++|+.||...... +....... ... ... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~-~~~------~~~-~~~ 219 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILN-KPL------QLK-PNI 219 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--------HHHHHHHh-CCc------CCC-CCC
Confidence 1678999999999999999999999753321 11111111 110 011 122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+..+.++++ +|++.||.+||++.+.+.
T Consensus 220 ~~~~~~li~---~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 220 TNSARHLLE---GLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CHHHHHHHH---HHcccCHHHCCCCCCCHH
Confidence 345555665 999999999999875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=261.35 Aligned_cols=216 Identities=19% Similarity=0.252 Sum_probs=165.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.+++.++|||| ..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 3566677899999999999984 568899999987543 223567889999999999998 346899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC------
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------ 420 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------ 420 (538)
++++|.+++...+ .+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++....
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06645 89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKR 163 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccc
Confidence 9999999997665 58999999999999999999999 899999999999999999999999999875321
Q ss_pred --------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 421 --------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 421 --------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
..++.++|||||||++|||++|+.||....... .+ ..... .... .+..
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~----~~----~~~~~-~~~~---~~~~ 231 (267)
T cd06645 164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----AL----FLMTK-SNFQ---PPKL 231 (267)
T ss_pred ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh----hH----Hhhhc-cCCC---CCcc
Confidence 115568999999999999999999986432111 00 00000 0100 0111
Q ss_pred cC-CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TG-KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.. ...++.+. +++.+|++.+|++|||+++|++
T Consensus 232 ~~~~~~~~~~~---~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 KDKMKWSNSFH---HFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cccCCCCHHHH---HHHHHHccCCchhCcCHHHHhc
Confidence 11 01223444 4555999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=261.41 Aligned_cols=230 Identities=19% Similarity=0.291 Sum_probs=167.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|+..+.||+|++|.||+|... +++.||+|.+..... ..+.+.+|+++++.++|||| ..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36778899999999999999965 589999999864322 24568899999999999998 3579999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|.++..... .+++.++..++.|++.||+|||+ .+|+|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 999999988876544 48999999999999999999999 8999999999999999999999999998764321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH-------hccCCc-
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL-------SSSGRI- 472 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~- 472 (538)
.++.++||||||+++|||++|+.||......+.. ..+..+.... ......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL-YHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH-HHHHHHhCCCchhhHHHhccchHh
Confidence 1457899999999999999999999753321100 0111110000 000000
Q ss_pred cccccccccCCC-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 473 KDVIDKALTGKG-----YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 473 ~~~~d~~l~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+...... .+.....+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000000 0111234556666999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=260.72 Aligned_cols=218 Identities=19% Similarity=0.272 Sum_probs=168.5
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-------------ccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------KPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------~~lv~ 343 (538)
+|+..+.||.|+||.||++.. .++..||+|.+.... ...+++.+|++++++++|+|+. .+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 467788999999999999984 568899999986432 2345688999999999999992 36899
Q ss_pred eecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 344 KYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCC--HPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
||+++++|.+++.... ...+++..++.++.|++.||+|||..+ ..+++|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999999997531 246899999999999999999999322 289999999999999999999999999988754
Q ss_pred CCC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 420 NGD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 420 ~~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
... ++.++||||||+++++|++|+.||...... .+... ...+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~----~~~~~~~--- 228 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-----QLASK----IKEGKFR--- 228 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-----HHHHH----HhcCCCC---
Confidence 321 467799999999999999999999753211 11111 1111111
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+ .......+.+++.+|++.+|++||++.+|++.
T Consensus 229 --~~----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 --RI----PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --CC----ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11 11122344555669999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=267.06 Aligned_cols=202 Identities=20% Similarity=0.251 Sum_probs=154.0
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHH-HHhcCCCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMK-QVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++||+|+||.||+|+. .+++.||+|.+.... ....++..|.. +++.++|||| ..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 468899999986432 22334555554 6788999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 81 GELFFHLQRER--CFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 99999887654 58889999999999999999999 9999999999999999999999999998864211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||++|+.||..... ......... +.. .+ ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~-~~~------~~-~~~~ 219 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--------SQMYDNILH-KPL------QL-PGGK 219 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--------HHHHHHHhc-CCC------CC-CCCC
Confidence 167799999999999999999999975321 111111111 110 01 1112
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMY 511 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~ 511 (538)
+..+.+ ++.+|++.||.+||++.
T Consensus 220 ~~~~~~---li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 220 TVAACD---LLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CHHHHH---HHHHHccCCHhhcCCCC
Confidence 334444 44599999999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=258.24 Aligned_cols=215 Identities=26% Similarity=0.405 Sum_probs=167.6
Q ss_pred CCCCCeEeecCCceEEEEEeCC-----CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD-----GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
|+..+.||.|+||.||++...+ +..||+|.++.... ..+.+..|++++..++|+|+ ..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456889999999999999643 38899999976543 35679999999999999999 346899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++++|.+++.......+++.++..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 99999999999987553338999999999999999999999 9999999999999999999999999999863321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||+|++++||++ |+.||..... ..+...+ . .+....
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~---~-~~~~~~---- 224 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EEVLEYL---K-KGYRLP---- 224 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHH---h-cCCCCC----
Confidence 16778999999999999999 8888864211 1111111 1 111100
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
. ....+.+ +.+++.+|+..+|++|||+.|+++.|
T Consensus 225 -~-~~~~~~~---~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 -K-PENCPPE---IYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -C-CCcCCHH---HHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0 1112233 44555599999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-32 Score=264.45 Aligned_cols=217 Identities=25% Similarity=0.396 Sum_probs=164.0
Q ss_pred CCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHH---HHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEK---QFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
|+..+.||+|+||+||+++.. +++.+|+|.+........ ...+|+.++++++|||| ..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 345678999999999999965 467899999986543322 34569999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC------
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------ 420 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------ 420 (538)
++++|.+++.... .+++..+..++.|+++||+|||+ .+|+|+||||+||++++++.++|+|||.+....
T Consensus 81 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 81 PGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp TTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEB
T ss_pred ccccccccccccc--ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998433 58999999999999999999999 999999999999999999999999999986421
Q ss_pred ------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 421 ------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 421 ------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
...+.++||||+|+++|+|++|..||......+ ........... .........
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~ 226 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD-----QLEIIEKILKR----PLPSSSQQS 226 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH-----HHHHHHHHHHT----HHHHHTTSH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchh-----hhhhhhhcccc----ccccccccc
Confidence 116788999999999999999999998641111 11111110000 000000000
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... ..+.+++.+||+.||++|||+.++++
T Consensus 227 ~~~~---~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 227 REKS---EELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TTSH---HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred chhH---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112 34455555999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=276.53 Aligned_cols=160 Identities=18% Similarity=0.229 Sum_probs=136.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
..+|...+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+|| ..++||||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 346888899999999999999965 478999996432 346789999999999999 345899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
. ++|.+++.... ..++|.+++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 243 ~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 243 R-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred C-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 5 69999887643 269999999999999999999999 9999999999999999999999999999874321
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
.++.++|||||||++|||++|..|+..
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~ 364 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS 364 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence 167889999999999999998876543
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=259.95 Aligned_cols=215 Identities=19% Similarity=0.316 Sum_probs=164.5
Q ss_pred CCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
|+..+.||+|+||.||+|... ++..+++|.+.... ...+.+.+|+++++.++|||+ ..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 445578999999999999954 57889999986533 334678899999999999999 34689999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|..++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 87 ~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (282)
T cd06643 87 GAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 162 (282)
T ss_pred CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence 99999886533 268999999999999999999999 9999999999999999999999999998854311
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||...... +.+...... ......
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~---- 229 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKS-EPPTLA---- 229 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--------HHHHHHhhc-CCCCCC----
Confidence 1456899999999999999999999753221 111111111 000110
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.....+.++.++++ +||+.+|.+||++.++++.
T Consensus 230 ~~~~~~~~~~~li~---~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 230 QPSRWSSEFKDFLK---KCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CccccCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 01112344555554 9999999999999998753
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=259.99 Aligned_cols=165 Identities=22% Similarity=0.352 Sum_probs=142.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||+|++|.||+|+. .+++.||||.++.... ....+.+|++++++++|||| ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 477889999999999999985 4689999999864322 23578899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+. ++|.+++.......+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 96 689999877555578999999999999999999999 9999999999999999999999999998764321
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++||||||+++|||+||+.||...
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 0467899999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-32 Score=272.95 Aligned_cols=212 Identities=23% Similarity=0.317 Sum_probs=172.7
Q ss_pred CCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
|.....||.|+||.||.|+ ..+.+.||||++..+. ..-.++..|++.|.+++|||++ .+|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 3444679999999999999 5678899999997432 2236689999999999999993 3599999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
|- |+-.|++.-.. +++.+.++..|+.+.+.||+|||+ .+.||||||..|||+++.|.+||+|||.|.+..+.
T Consensus 108 Cl-GSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 108 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF 182 (948)
T ss_pred Hh-ccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence 95 58888887554 368999999999999999999999 99999999999999999999999999999865432
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
|+-|+||||+|++..|+.-+++|+...+.. .. +..... --.|.+...
T Consensus 183 vGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-------SA-LYHIAQ------NesPtLqs~ 248 (948)
T KOG0577|consen 183 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SA-LYHIAQ------NESPTLQSN 248 (948)
T ss_pred cCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-------HH-HHHHHh------cCCCCCCCc
Confidence 889999999999999999999998753221 11 111111 112455566
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+++.+..|++ .|++.-|.+|||.+++++
T Consensus 249 eWS~~F~~Fvd---~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 249 EWSDYFRNFVD---SCLQKIPQERPTSEELLK 277 (948)
T ss_pred hhHHHHHHHHH---HHHhhCcccCCcHHHHhh
Confidence 78888888888 999999999999998876
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=264.58 Aligned_cols=161 Identities=24% Similarity=0.332 Sum_probs=133.6
Q ss_pred CCeEeecCCceEEEEEeC---CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-------------ccEEEeecCC
Q 040267 285 QNVLVSTWTGTTYKAMLL---DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-------------KPLVYKYMSN 348 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-------------~~lv~e~~~~ 348 (538)
.++||+|+||.||+|... +++.||+|.++.... ...+.+|++++++++||||+ .++++||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 468999999999999854 467899999875432 35678999999999999992 3589999864
Q ss_pred CCHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEeccCCc
Q 040267 349 GTLYSLLHSNG-------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDFGFSR 417 (538)
Q Consensus 349 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~ 417 (538)
+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 8888876321 2358899999999999999999999 999999999999999 456789999999986
Q ss_pred ccCC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++||||+||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 4321 15678999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=258.51 Aligned_cols=215 Identities=21% Similarity=0.316 Sum_probs=167.5
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|...+.||+|++|.||++.. .+++.+|+|.+.... ...+.+.+|++++++++|||+ ..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 467788999999999999985 468899999986432 234578899999999999998 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCcccCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~--- 421 (538)
+++++|.+++.......+++..+.+++.+++.||+|||+ .+++|+||||+||+++++ ..+||+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 999999999987654568999999999999999999999 999999999999999865 4689999999874431
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
..+.++||||||+++|+|++|+.||..... ...+..... +....+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~------ 222 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL--------PALVLKIMS-GTFAPIS------ 222 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch--------HHHHHHHHh-cCCCCCC------
Confidence 157789999999999999999999975321 111211111 1111111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.. +.+++.+||+.+|++|||+.|+++.
T Consensus 223 ~~~~~~---l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 223 DRYSPD---LRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCcCHH---HHHHHHHHccCChhhCCCHHHHhhC
Confidence 112223 4455559999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-32 Score=263.28 Aligned_cols=208 Identities=21% Similarity=0.284 Sum_probs=157.4
Q ss_pred CeEeecCCceEEEEEeCC-C-------CEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 286 NVLVSTWTGTTYKAMLLD-G-------SMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-~-------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+.||+|+||.||+|.... + ..||+|.+.... ...+.+.+|+.+++.++|||+ ..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998532 2 348888886433 234678899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--------eEEEeccCCc
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--------ARIMDFGFSR 417 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~Dfg~a~ 417 (538)
+++|+|.++++..+. .+++..+++++.|++.||+|||+ .+|+||||||+||+++.++. ++++|||++.
T Consensus 81 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999986543 68999999999999999999999 99999999999999987765 6999999886
Q ss_pred ccCC--------------------CCCCccCcccHHHHHHHHHhCC-CCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 418 LTNG--------------------DASLQKDVHGFGVVLLELVTGQ-KPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 418 ~~~~--------------------~~~~~~DV~S~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.... .++.++||||||+++|||++|. .|+...... ..........
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------~~~~~~~~~~------ 222 (258)
T cd05078 157 TVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------KKLQFYEDRH------ 222 (258)
T ss_pred ccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--------HHHHHHHccc------
Confidence 4321 1567899999999999999985 555432111 1111000000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
.+.. ... .++.+++.+||+.||++|||++++++.|
T Consensus 223 --~~~~-~~~---~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 223 --QLPA-PKW---TELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred --cCCC-CCc---HHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0111 111 2345555599999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=262.17 Aligned_cols=219 Identities=20% Similarity=0.340 Sum_probs=167.0
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+|+..+.||+|+||.||++... ++..||+|.++... ....++.+|++++.+++|+|| ..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5777889999999999999965 68999999886432 223578899999999999999 346999999
Q ss_pred CCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 347 SNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
++++|.+++.... ...+++..+..++.+++.||.|||+ ..+|+|+||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 9999999987642 2368999999999999999999996 15899999999999999999999999998864311
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||...... .......... .+.. +
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~-~~~~-----~ 228 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLSAIV-DGDP-----P 228 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHHHHh-hcCC-----C
Confidence 0367899999999999999999999742211 1111111111 1110 1
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+... .+.++.. ++.+|++.+|++||++.+++..
T Consensus 229 ~~~~~-~~~~~~~---li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 229 TLPSG-YSDDAQD---FVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCcc-cCHHHHH---HHHHHcccCcccCCCHHHHhcC
Confidence 11111 2334444 4459999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=260.12 Aligned_cols=218 Identities=18% Similarity=0.262 Sum_probs=168.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||.|++|.||++... ++..||+|.++... ...+.+.+|++++++++|+|+ ..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356778889999999999999964 68899999987543 234578899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++...+ ..+++..+.+++.|++.||.|||+ .+|+|+||||+||+++.++.++|+|||++.....
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK 159 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence 99999999987644 258999999999999999999999 9999999999999999999999999998753221
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||++|+.||...... ....... .+......
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~~~~- 229 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--------RVLLKIL-KSEPPTLD- 229 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--------HHHHHHh-cCCCCCcC-
Confidence 1455899999999999999999999753211 1111111 11100000
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.....+.++.+ ++.+||+.+|++||++.+|++.
T Consensus 230 ---~~~~~~~~~~~---li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 230 ---QPSKWSSSFND---FLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ---CcccCCHHHHH---HHHHHhccChhhCcCHHHHhcC
Confidence 01112334444 4559999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-31 Score=261.12 Aligned_cols=214 Identities=18% Similarity=0.333 Sum_probs=167.1
Q ss_pred cCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.+|+..+.||.|++|.||+|. ..+++.||+|.+.... ...+.+.+|+.+++.++|||+ ..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 357888899999999999998 4578999999986533 334678899999999999999 356999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|.+++... .+++.++..++.+++.||+|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 172 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR 172 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC
Confidence 999999998754 48999999999999999999999 9999999999999999999999999998764321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ......... ...... ...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--------~~~~~~~~~-~~~~~~----~~~ 239 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATN-GTPELQ----NPE 239 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc-CCcccC----Ccc
Confidence 1567899999999999999999999753221 111111110 000000 011
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+..+.. ++.+||..||++|||+.+|++
T Consensus 240 ~~~~~~~~---li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 240 KLSPIFRD---FLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred cCCHHHHH---HHHHHhhcChhhCCCHHHHhh
Confidence 12234444 455999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=257.85 Aligned_cols=213 Identities=18% Similarity=0.197 Sum_probs=162.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc------ccHHHHHHHHHHHhcCCCCCC-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK------LGEKQFLLEMKQVGLLKHPNL-------------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~H~ni-------------~~ 339 (538)
.+|...+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++|||| ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688889999999999999995 468999999885321 112467889999999999998 13
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
+++|||+++|+|.+++.... .+++....+++.|++.||+|||+ .+|+|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 58999999999999997654 58899999999999999999999 99999999999999999999999999988632
Q ss_pred CC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. .++.++||||||+++|||++|+.||...... .. .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~-~~~~~~~~~-- 226 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-------AA-IFKIATQPT-- 226 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-------HH-HHHHhcCCC--
Confidence 10 1567899999999999999999999742211 11 111111100
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+. .+......+..++.+|+. +|++||+++||++
T Consensus 227 ---~~~----~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 227 ---NPV----LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ---CCC----CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 111 111222233344448884 8999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=273.86 Aligned_cols=210 Identities=21% Similarity=0.329 Sum_probs=168.0
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------c
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------E 338 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~ 338 (538)
....++|...++||+|.||+|+.+..+ +++.+|||.+++.. .+.+..+.|.+++... +||.+ .
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 344568999999999999999999954 58899999998743 3446678888888877 49988 5
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|.||||+.||++..+.+.. .+++..+.-++..|+.||+|||+ ++||+||||.+|||||.+|.+||+|||+++.
T Consensus 444 l~fvmey~~Ggdm~~~~~~~---~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTD---VFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEEecCCCcEEEEEecc---cccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccc
Confidence 57999999999955555433 59999999999999999999999 9999999999999999999999999999984
Q ss_pred cC-----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 419 TN-----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 419 ~~-----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.- ..|+.++|.|||||+||||+.|..||.++++++.+. ....
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fd--------sI~~------- 582 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFD--------SIVN------- 582 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--------HHhc-------
Confidence 32 129999999999999999999999999765543221 1111
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
|..+-+...+.++..+++ +.+..+|++|--+
T Consensus 583 -d~~~yP~~ls~ea~~il~---~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 -DEVRYPRFLSKEAIAIMR---RLLRKNPEKRLGS 613 (694)
T ss_pred -CCCCCCCcccHHHHHHHH---HHhccCcccccCC
Confidence 111112234455555555 9999999999876
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=262.77 Aligned_cols=163 Identities=21% Similarity=0.287 Sum_probs=138.5
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|...+.||+|++|.||+|.. .+|..||+|.++... .....+.+|++++++++|+|+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 367778999999999999995 468999999986432 223567889999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
++ ++|.+++.... ..+++..+..++.||++||.|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 97 58888876543 258999999999999999999999 9999999999999999999999999998874321
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
.++.++|||||||++|||+||+.|+..
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~ 202 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 202 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 147789999999999999999988653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=259.33 Aligned_cols=216 Identities=17% Similarity=0.243 Sum_probs=166.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||.|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.++|+|+ ..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45777889999999999999964 58899999987543 334678899999999999999 356999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|..++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 167 (292)
T cd06644 92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR 167 (292)
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccccccc
Confidence 9999998876543 258999999999999999999999 9999999999999999999999999998763211
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||...... ......... .. +
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~-~~-----~ 233 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKS-EP-----P 233 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--------HHHHHHhcC-CC-----c
Confidence 1356799999999999999999999753221 111111111 00 0
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
... ........+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 234 TLS--QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cCC--CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 01111223445555999999999999999976
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=255.89 Aligned_cols=218 Identities=21% Similarity=0.343 Sum_probs=165.2
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc-----------cHHHHHHHHHHHhcCCCCCC-----------
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL-----------GEKQFLLEMKQVGLLKHPNL----------- 337 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~H~ni----------- 337 (538)
+|...+.||+|++|.||+|.. .+++.||+|.++.... ..+.+.+|+.+++.++|+|+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 466778999999999999984 4689999998853210 12357889999999999998
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++||||+++|+|.+++...+ .+++..+..++.|++.||.|||+ .+++|+||||+||++++++.++|+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 3468999999999999998764 68999999999999999999999 999999999999999999999999999886
Q ss_pred ccCC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC
Q 040267 418 LTNG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG 470 (538)
Q Consensus 418 ~~~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (538)
.... .++.++||||||+++||+++|..||..... ..... .... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-------~~~~~-~~~~-~ 227 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-------IAAMF-KLGN-K 227 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-------HHHHH-Hhhc-c
Confidence 4211 146789999999999999999999964221 11111 1111 1
Q ss_pred CccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 471 RIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 471 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.....+....... .+.+ +.+++.+|++.+|++|||+.+|++.
T Consensus 228 ~~~~~~~~~~~~~-~~~~---~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 RSAPPIPPDVSMN-LSPV---ALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccCCcCCcccccc-CCHH---HHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1111111111111 1234 4445559999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-31 Score=269.21 Aligned_cols=161 Identities=19% Similarity=0.267 Sum_probs=136.1
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------ccEEEe
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e 344 (538)
....+|...+.||+|+||.||+|+.. ++..||+|..... ....|+.++++++|+||+ .++|+|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 34457999999999999999999964 5789999975432 235699999999999993 458999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+. |+|.+++.... ..+++..+.+|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 138 ~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 212 (357)
T PHA03209 138 HYS-SDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA 212 (357)
T ss_pred ccC-CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCcc
Confidence 995 58999887543 368999999999999999999999 9999999999999999999999999999874211
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
.++.++|||||||++|||+++..|+.
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 213 FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 16789999999999999999665543
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=264.90 Aligned_cols=219 Identities=16% Similarity=0.150 Sum_probs=164.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||++... +++.+|+|.+.+.. .....+.+|+.++..++|+|| ..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888899999999999999964 47899999986422 223457889999999999998 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999998643 258999999999999999999999 9999999999999999999999999998753210
Q ss_pred ---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 ---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++|||||||++|||++|+.||..... ...............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~~ 228 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNHKERFQ 228 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH--------HHHHHHHhCCCcccc
Confidence 146789999999999999999999975322 122222221111000
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCC--CCCCCCCHHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAV--RPKEKWSMYQVYIS 516 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~--dP~~RPs~~evl~~ 516 (538)
+... ....+.++.++++ +|+.. ++..||++.|+++.
T Consensus 229 -~p~~--~~~~s~~~~~li~---~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 -FPAQ--VTDVSEDAKDLIR---RLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -CCCc--cccCCHHHHHHHH---HHccChhhhcCCCCHHHHhCC
Confidence 0000 0122445666665 66644 44447899999876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=262.03 Aligned_cols=167 Identities=23% Similarity=0.327 Sum_probs=141.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++++|...+.||+|+||.||+|.. .++..||+|.++... .....+.+|+.+++.++|+|| ..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999999985 468999999986432 223467899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+. +++.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++++||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9996 68877775543 257888999999999999999999 8999999999999999999999999998864211
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++||||||+++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 1456789999999999999999999753
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=259.47 Aligned_cols=219 Identities=19% Similarity=0.303 Sum_probs=165.3
Q ss_pred CCCCCCeEeecCCceEEEEEeCC--CCEEEEEEccccc-----------ccHHHHHHHHHHHhc-CCCCCC---------
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD--GSMLAIKRLSACK-----------LGEKQFLLEMKQVGL-LKHPNL--------- 337 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~-l~H~ni--------- 337 (538)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... ....++..|+.++.+ ++|||+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999654 6889999885311 122457788888875 799999
Q ss_pred --cccEEEeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 338 --EKPLVYKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 338 --~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
..+++|||+++++|.+++... ....+++..+++++.|++.||.|||+ ..+++|+||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 346999999999999988542 23468999999999999999999995 267999999999999999999999999
Q ss_pred cCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 414 GFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 414 g~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
|.+..... .++.++||||||+++|||++|+.||..... ........ .+.
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--------~~~~~~~~-~~~ 229 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--------LSLATKIV-EAV 229 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--------HHHHHHHh-hcc
Confidence 99874321 156789999999999999999999974221 11111111 111
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
.... .....+..+. +++.+||+.||++||++.||.++++
T Consensus 230 ~~~~-----~~~~~~~~l~---~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPL-----PEGMYSEDVT---DVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcC-----CcccCCHHHH---HHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111 0111223444 4555999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=264.76 Aligned_cols=215 Identities=20% Similarity=0.316 Sum_probs=167.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|++|.||+|... +++.||+|.+..... ..+.+..|++++..++|+|| ..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36788899999999999999954 589999999975432 23568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||+++++|.+++.......+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 99999999999986544579999999999999999999999 999999999999999999999999999876321
Q ss_pred -------------------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 421 -------------------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 421 -------------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 0156689999999999999999999975332
Q ss_pred cccccccHHHHHHHHhccCCccccccccccC-CCcHHHHHHHHHHHhHccCCCCCCCCC----HHHHHH
Q 040267 452 EEGYKGNLVNWIDQLSSSGRIKDVIDKALTG-KGYDDEILQFLQIACKCVAVRPKEKWS----MYQVYI 515 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~evl~ 515 (538)
.. .+ ..... ... .... ...+..+.++++ +|++.||++||| +.|+++
T Consensus 238 ~~-------~~-~~~~~-~~~------~~~~~~~~~~~~~~li~---~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DE-------TF-SNILK-KEV------TFPGSPPVSSSARDLIR---KLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HH-------HH-HHHhc-CCc------cCCCccccCHHHHHHHH---HHccCCHhHCCCchhhHHHHHc
Confidence 11 11 11111 000 0000 012344555555 999999999999 666655
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=264.10 Aligned_cols=160 Identities=24% Similarity=0.338 Sum_probs=132.8
Q ss_pred CCeEeecCCceEEEEEeC---CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-------------ccEEEeecCC
Q 040267 285 QNVLVSTWTGTTYKAMLL---DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-------------KPLVYKYMSN 348 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-------------~~lv~e~~~~ 348 (538)
..+||+|+||.||+|+.. ++..||+|.++.... ...+.+|++++++++||||+ .++|+||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 358999999999999964 357899999875432 35678999999999999992 3589999875
Q ss_pred CCHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEeccCCc
Q 040267 349 GTLYSLLHSNG-------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDFGFSR 417 (538)
Q Consensus 349 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~ 417 (538)
+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 8888775321 2358899999999999999999999 999999999999999 566899999999987
Q ss_pred ccCC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 418 LTNG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 418 ~~~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.... .++.++|||||||++|||+||+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 4321 1567899999999999999999999754
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-31 Score=256.23 Aligned_cols=219 Identities=24% Similarity=0.365 Sum_probs=169.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|+..+.||.|++|.||+|.. .++..+|+|.+.... ...+.+.+|++.++.++|+|+ ..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4688889999999999999994 468899999986533 234678999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 346 MSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
+++++|.+++..... ..+++.....++.|++.||+|||+ .+|+|+||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976532 468999999999999999999999 9999999999999999999999999998753221
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
..+.++||||||+++|||++|+.||....... ...... ...
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~----~~~~~~----~~~------ 223 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK----VLMLTL----QND------ 223 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh----hHHHHh----cCC------
Confidence 15678999999999999999999997533211 111111 110
Q ss_pred cccccCCC-cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 477 DKALTGKG-YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 477 d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.+.... .......+.+++.+|++.||++|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 01111100 0112233445555999999999999999976
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=257.10 Aligned_cols=213 Identities=19% Similarity=0.306 Sum_probs=166.4
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc--cccHHHHHHHHHHHhcCC---CCCC-----------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC--KLGEKQFLLEMKQVGLLK---HPNL-----------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~---H~ni-----------~~~lv~ 343 (538)
.|+..+.||+|+||.||+|.. .+++.||+|.++.. ....+++.+|++++++++ |||+ ..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467778999999999999995 56899999998643 233467889999999997 9998 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++++|.+++... .+++.....++.|++.||.|||+ .+|+|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998764 58999999999999999999999 9999999999999999999999999998764321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||++|+.||...... .+... .. ....+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~~-~~-----~~~~~~ 221 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--------RAMML-IP-----KSKPPR 221 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--------hhhhc-cc-----cCCCCC
Confidence 1467899999999999999999999753221 11110 00 001112
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.....+.+ +.+++.+|++.||++||++.|+++.
T Consensus 222 ~~~~~~~~~---~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 222 LEDNGYSKL---LREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCcccCCHH---HHHHHHHHcCCCcccCcCHHHHhhC
Confidence 222112233 4455559999999999999999863
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=263.44 Aligned_cols=209 Identities=19% Similarity=0.312 Sum_probs=163.1
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
...||+|+||.||++.. .++..||||.+.... ...+.+.+|+..++.++|+|+ ..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 35699999999999985 468899999986533 334568899999999999998 34799999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 107 ~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 180 (292)
T cd06658 107 TDIVTHT---RMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVG 180 (292)
T ss_pred HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeec
Confidence 9988653 48999999999999999999999 8999999999999999999999999998864321
Q ss_pred -------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC-CCcHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG-KGYDD 487 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~ 487 (538)
.++.++||||||+++|||++|+.||....... -+.... ....+.... ...+.
T Consensus 181 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--------~~~~~~------~~~~~~~~~~~~~~~ 246 (292)
T cd06658 181 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--------AMRRIR------DNLPPRVKDSHKVSS 246 (292)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHH------hcCCCccccccccCH
Confidence 15788999999999999999999997532211 011100 011111111 11233
Q ss_pred HHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 488 EILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 488 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+..+++ +|+..||++|||++|+++.
T Consensus 247 ~~~~li~---~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 247 VLRGFLD---LMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHH---HHccCChhHCcCHHHHhhC
Confidence 4455555 9999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=289.86 Aligned_cols=221 Identities=19% Similarity=0.246 Sum_probs=167.5
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-------------c
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------K 339 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------~ 339 (538)
...++|...+.||+|+||.||+|.. .++..||+|.+.... .....+..|+.++.+++||||+ .
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3456788999999999999999995 457889999986432 2345688999999999999992 3
Q ss_pred cEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCC----CCCccccCCCCCCeeeCC---------
Q 040267 340 PLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCC----HPPCLHQNISSSVILVDE--------- 404 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~----~~~ivH~Dlkp~NIll~~--------- 404 (538)
|+||||+++|+|.++|.... ...+++..++.|+.||+.||+|||+.. ..+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 68999999999999997532 236999999999999999999999832 145999999999999964
Q ss_pred --------CCCeEEEeccCCcccCC------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 405 --------DFDARIMDFGFSRLTNG------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 405 --------~~~~kl~Dfg~a~~~~~------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
...+||+|||++..... .++.++|||||||++|||+||+.||.....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~- 248 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN- 248 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-
Confidence 24589999999875321 156789999999999999999999974221
Q ss_pred ccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 453 EGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+..+ ... +.+.....+.++..+ +..||+.+|.+||++.|++.
T Consensus 249 ------~~qli~~l-k~~-------p~lpi~~~S~eL~dL---I~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 ------FSQLISEL-KRG-------PDLPIKGKSKELNIL---IKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred ------HHHHHHHH-hcC-------CCCCcCCCCHHHHHH---HHHHhcCChhHCcCHHHHhc
Confidence 11112111 111 111111123344444 45999999999999999984
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=269.44 Aligned_cols=165 Identities=17% Similarity=0.218 Sum_probs=143.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||.||++.. .+++.||+|.++... .....+.+|+.++..++|+|| ..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688889999999999999995 468999999996422 223567889999999999999 347999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 9999999999998765 58999999999999999999999 999999999999999999999999999875321
Q ss_pred -------------------------------------------------------CCCCCccCcccHHHHHHHHHhCCCC
Q 040267 421 -------------------------------------------------------GDASLQKDVHGFGVVLLELVTGQKP 445 (538)
Q Consensus 421 -------------------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p 445 (538)
..++.++|||||||++|||+||+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 1167889999999999999999999
Q ss_pred CCCC
Q 040267 446 FEIN 449 (538)
Q Consensus 446 ~~~~ 449 (538)
|...
T Consensus 236 f~~~ 239 (360)
T cd05627 236 FCSE 239 (360)
T ss_pred CCCC
Confidence 9754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=270.84 Aligned_cols=205 Identities=20% Similarity=0.240 Sum_probs=155.3
Q ss_pred EeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcC---CCCCC-----------cccEEEeecCC
Q 040267 288 LVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLL---KHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 288 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l---~H~ni-----------~~~lv~e~~~~ 348 (538)
||+|+||.||+|+. .+++.||+|.+.... .....+..|..++... +|||| ..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 68999999999995 468999999986432 1123355677776665 69998 34799999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~ 155 (330)
T cd05586 81 GELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNT 155 (330)
T ss_pred ChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccC
Confidence 99999987655 68999999999999999999999 9999999999999999999999999999864210
Q ss_pred -----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++|||||||++|||+||+.||...... ..... ...+.. .+....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--------~~~~~-i~~~~~------~~~~~~ 220 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--------QMYRN-IAFGKV------RFPKNV 220 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--------HHHHH-HHcCCC------CCCCcc
Confidence 1578899999999999999999999753221 11111 111111 111112
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCC----HHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWS----MYQVYI 515 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs----~~evl~ 515 (538)
.+++...+++ +|++.||.+||+ +.++++
T Consensus 221 ~~~~~~~li~---~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 221 LSDEGRQFVK---GLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCHHHHHHHH---HHcCCCHHHCCCCCCCHHHHhc
Confidence 3345555555 999999999995 555554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=251.41 Aligned_cols=213 Identities=24% Similarity=0.379 Sum_probs=166.1
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc------ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK------LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|...+.||+|++|.||+|... ++..|++|.+.... ...+.+.+|+.++++++|+|+ ..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3677789999999999999965 78999999986432 123568899999999999998 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999998654 58999999999999999999999 9999999999999999999999999998764211
Q ss_pred ---------------------C-CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ---------------------D-ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ---------------------~-~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. ++.++|+||||+++|||++|+.||..... ...............
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~----- 222 (258)
T cd06632 156 SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--------VAAVFKIGRSKELPP----- 222 (258)
T ss_pred ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--------HHHHHHHHhcccCCC-----
Confidence 1 56789999999999999999999975321 111111111011111
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ....+..+.+ ++.+|++.+|++||++.+++.
T Consensus 223 ~-~~~~~~~~~~---li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 I-PDHLSDEAKD---FILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred c-CCCcCHHHHH---HHHHHhhcCcccCcCHHHHhc
Confidence 1 1112234444 445999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=269.56 Aligned_cols=168 Identities=25% Similarity=0.336 Sum_probs=147.5
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC----------------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL----------------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni----------------~~~lv 342 (538)
.|.+.++||+|.||.|.+|. ..+++.||||+++.......+-..|+.+|..++ |.+- +.|||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 68889999999999999999 667999999999987666677888999999997 5432 55799
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC--CCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED--FDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~ 420 (538)
+|.+.. +|+++++...-..++......++.||+.||.+||+ .+|||+||||+||||.+- ..+||+|||.|....
T Consensus 267 fELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 267 FELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred ehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 999976 99999999887779999999999999999999999 999999999999999754 479999999998654
Q ss_pred CC--------------------CCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 421 GD--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 421 ~~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
.. |+.+.||||||||+.||++|.+-|.+.+..
T Consensus 343 q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~ 394 (586)
T KOG0667|consen 343 QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY 394 (586)
T ss_pred CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH
Confidence 42 899999999999999999998888765543
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=252.71 Aligned_cols=215 Identities=22% Similarity=0.324 Sum_probs=167.8
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||+|+||.||+|... +|..+|+|.+.... ...+.+.+|+.++++++|+|+ ..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677789999999999999954 58899999986532 234578899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTNG--- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~--- 421 (538)
+++++|.+++.......+++..+..++.|++.||+|||+ .+++|+||||+||++++++ .+||+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 999999999987654468999999999999999999999 9999999999999999885 469999998864322
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++||||||++++||++|+.||.... ..+++..... +..... .
T Consensus 158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~~~-----~ 223 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--------LHQLVLKICQ-GYFAPI-----S 223 (257)
T ss_pred cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHhc-ccCCCC-----C
Confidence 15678999999999999999999997432 2222222211 111111 0
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+..+ .+++.+|++.+|++|||+.|+++.
T Consensus 224 -~~~~~~~---~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 224 -PNFSRDL---RSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -CCCCHHH---HHHHHHHhccChhhCcCHHHHhhC
Confidence 1122344 445559999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=255.48 Aligned_cols=216 Identities=20% Similarity=0.338 Sum_probs=166.2
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc-------cHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL-------GEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
+|+..+.||+|++|.||+|. ..+++.||+|.+..... ..+.+.+|++++++++|+|+ ..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47788999999999999998 46789999999864321 23568899999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTN 420 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~ 420 (538)
|+||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++ .+||+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999998655 58999999999999999999999 9999999999999998775 59999999876432
Q ss_pred C---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 421 G---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 421 ~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
. .++.++||||+|++++||++|+.||...... .............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~--- 227 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS-----NHLALIFKIASAT--- 227 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc-----chHHHHHHHhccC---
Confidence 1 1567899999999999999999999643221 1111111110000
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ....+......+.+++.+|++.+|++|||+.|+++
T Consensus 228 --~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 --T----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --C----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0 01111222234555666999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=259.36 Aligned_cols=165 Identities=23% Similarity=0.369 Sum_probs=141.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|+..+.||+|++|.||+|... +++.||+|.+.... .....+.+|++++++++|+|| ..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56888899999999999999954 68999999986432 223457789999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
+++ +|.+++..... .+++.....++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~~~-~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 85 LDT-DLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred CCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 985 99999876543 68999999999999999999999 999999999999999999999999999875321
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
..++.++||||||+++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 01567899999999999999999999753
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=253.99 Aligned_cols=218 Identities=22% Similarity=0.273 Sum_probs=168.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|++|.||+|.. .+++.+|+|.+.... ...+.+.+|++++++++|||+ ..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 5788889999999999999995 457899999987543 235678999999999999999 346899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|.+++.... ..+++.++..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+.....
T Consensus 83 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 158 (262)
T cd06613 83 GGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKR 158 (262)
T ss_pred CCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhhcc
Confidence 9999999987652 258999999999999999999999 9999999999999999999999999998763211
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++||||||+++|||+||+.||........ .. . ....... .+.+
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~----~~----~-~~~~~~~---~~~~ 226 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA----LF----L-ISKSNFP---PPKL 226 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH----HH----H-HHhccCC---Cccc
Confidence 245579999999999999999999975332110 00 0 0011000 0111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ........+.+++.+||+.+|.+|||+.+|+.
T Consensus 227 ~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 K--DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred c--chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1 11122234555666999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=262.08 Aligned_cols=219 Identities=16% Similarity=0.237 Sum_probs=168.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||.||++... +++.||+|.+.... ...+.+.+|+++++.++|||| ..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999954 57899999986532 223567899999999999999 336999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc----
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT---- 419 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~---- 419 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999997655 58999999999999999999999 99999999999999999999999999987621
Q ss_pred ----------------------------------CCCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 420 ----------------------------------NGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 420 ----------------------------------~~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
...++.++||||||+++||+++|+.||..... .++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~~~ 227 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFGQ 227 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 01167789999999999999999999974322 111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
... +. ...+... ...+.++..+++ +|++.+|++||++.++.+.|+.
T Consensus 228 ~~~-~~---~~~~~~~-~~~~~~~~~li~---~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 228 VIS-DD---IEWPEGD-EALPADAQDLIS---RLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHh-cc---cCCCCcc-ccCCHHHHHHHH---HHhccChhhccCccCHHHHHhC
Confidence 111 11 0111111 122334455555 9999999999997666655544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=263.63 Aligned_cols=166 Identities=20% Similarity=0.194 Sum_probs=142.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+++.. +++.||+|.+.... .....+.+|+.++..++|+|| ..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999954 68899999986422 223457889999999999998 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999998643 258999999999999999999999 9999999999999999999999999998763321
Q ss_pred ---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 ---------------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 ---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 1456899999999999999999999753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=257.46 Aligned_cols=211 Identities=18% Similarity=0.287 Sum_probs=164.9
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeecC
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYMS 347 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~~ 347 (538)
|+..+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||. .++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 56678899999999999985 468899999986432 2235688999999999999993 569999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+++|.+++... .+++..+..++.|++.|+.|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 86 ~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 86 GGSALDLLEPG---PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 99999998754 48999999999999999999999 9999999999999999999999999998864221
Q ss_pred -----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
..+.++|||||||++|||++|..||..... ..+... ...+.. +.+.. .
T Consensus 160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~-~~~~~~-----~~~~~-~ 224 (277)
T cd06641 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--------MKVLFL-IPKNNP-----PTLEG-N 224 (277)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--------HHHHHH-HhcCCC-----CCCCc-c
Confidence 156689999999999999999999964221 111111 111111 11111 1
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+.+ +.+++.+|++.+|.+||++.++++.
T Consensus 225 ~~~~---~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 225 YSKP---LKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cCHH---HHHHHHHHccCChhhCcCHHHHHhC
Confidence 2233 4445559999999999999999984
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=258.42 Aligned_cols=216 Identities=18% Similarity=0.307 Sum_probs=161.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHH-HhcCCCCCCc-----------ccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQ-VGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~-l~~l~H~ni~-----------~~lv~e 344 (538)
++|+..+.||+|+||.||++.. .+|+.||+|+++... ....++..|+.. ++..+|||++ .+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 4688889999999999999995 469999999987543 223456667665 5666899993 469999
Q ss_pred ecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|++ |+|.+++... ....+++..+..++.|++.||+|||+ . +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 6888887652 22468999999999999999999998 6 899999999999999999999999999864321
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++|+||||+++|||++|+.||...... . +....... +
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~-~~~~~~~~-~----- 223 (283)
T cd06617 157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP------F-QQLKQVVE-E----- 223 (283)
T ss_pred ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC------H-HHHHHHHh-c-----
Confidence 1367899999999999999999999642110 0 01111111 0
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+.+.....+.++.. ++.+|++.+|++||++.++++
T Consensus 224 ~~~~~~~~~~~~~l~~---li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 PSPQLPAEKFSPEFQD---FVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCCCCCccccCHHHHH---HHHHHccCChhhCcCHHHHhc
Confidence 0111111112334444 445999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=254.15 Aligned_cols=211 Identities=21% Similarity=0.263 Sum_probs=168.5
Q ss_pred CCCCCeEeecCCceEEEEEeCC-CCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
|...+.||.|.-|+||.+...+ +..+|+|++.+.. ....+...|-+||+.+.||.+ ..|++|||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY 158 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence 3445679999999999999754 6899999997643 223567789999999999999 45799999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
|+||+|+.+.+++..+.+++..+..++.+|+-||+|||. .|||.|||||+||||.++|.+.|+||.++.....
T Consensus 159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 999999999999988899999999999999999999999 9999999999999999999999999987652100
Q ss_pred --------------------------------------------------C-------------------------CCCc
Q 040267 422 --------------------------------------------------D-------------------------ASLQ 426 (538)
Q Consensus 422 --------------------------------------------------~-------------------------~~~~ 426 (538)
. .+.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA 315 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA 315 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence 0 4567
Q ss_pred cCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC---CcHHHHHHHHHHHhHccCCC
Q 040267 427 KDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK---GYDDEILQFLQIACKCVAVR 503 (538)
Q Consensus 427 ~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~---~~~~~~~~l~~l~~~cl~~d 503 (538)
+|.|+|||++|||+.|+.||.+....+.. ..++-..+.-. ..+..++++|+ +.|..|
T Consensus 316 VDWWtfGIflYEmLyG~TPFKG~~~~~Tl-----------------~NIv~~~l~Fp~~~~vs~~akDLIr---~LLvKd 375 (459)
T KOG0610|consen 316 VDWWTFGIFLYEMLYGTTPFKGSNNKETL-----------------RNIVGQPLKFPEEPEVSSAAKDLIR---KLLVKD 375 (459)
T ss_pred hhHHHHHHHHHHHHhCCCCcCCCCchhhH-----------------HHHhcCCCcCCCCCcchhHHHHHHH---HHhccC
Confidence 89999999999999999999976554322 12222222111 22345555555 999999
Q ss_pred CCCCCC----HHHHHH
Q 040267 504 PKEKWS----MYQVYI 515 (538)
Q Consensus 504 P~~RPs----~~evl~ 515 (538)
|.+|.- +.||-+
T Consensus 376 P~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKR 391 (459)
T ss_pred hhhhhccccchHHhhc
Confidence 999998 666644
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=254.18 Aligned_cols=214 Identities=25% Similarity=0.361 Sum_probs=166.5
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|...+.||+|++|.||+|.. .+++.||+|.++.... ..+.+.+|+.++++++|+|| ..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 467788999999999999995 4689999999975443 34678999999999999998 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++.... .+++..+..++.+++.||+|||+ .+|+|+||+|+||++++++.+||+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999998754 58899999999999999999999 9999999999999999999999999998764321
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
..+.++||||||+++||+++|+.||...... ........ .+.
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-------~~~~~~~~-~~~---- 223 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-------FQIMFHVG-AGH---- 223 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-------HHHHHHHh-cCC----
Confidence 0467899999999999999999999743211 01111100 010
Q ss_pred ccccccCC-CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALTGK-GYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.+... ..+..+. +++.+|++.+|++|||+.|++.
T Consensus 224 -~~~~~~~~~~~~~~~---~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 -KPPIPDSLQLSPEGK---DFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -CCCCCcccccCHHHH---HHHHHHccCCcccCCCHHHHhc
Confidence 1111111 1123344 4455999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=251.23 Aligned_cols=213 Identities=20% Similarity=0.227 Sum_probs=167.2
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
+|...+.||.|+||.||+|... ++..||+|.+.... ...+.+.+|++++++++|||| ..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4777889999999999999964 58999999996432 234678999999999999999 3579999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++++|.+++.... .+++.++..++.|+++||.|||+ .+++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 81 LLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred CCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence 999999999998763 58999999999999999999999 99999999999999999999999999988753221
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.+.++||||||+++|+|++|+.||...... ...+........ ... . .
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~--~~~----~-~ 222 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQETA--DVL----Y-P 222 (258)
T ss_pred ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhccc--ccc----C-c
Confidence 578999999999999999999999854321 112222111110 000 0 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCH--HHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSM--YQVY 514 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~--~evl 514 (538)
...+..+. +++.+||+.||.+||++ +|++
T Consensus 223 ~~~~~~~~---~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 223 ATWSTEAI---DAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccCcHHHH---HHHHHHccCChhHcCCccHHHHh
Confidence 11223444 45559999999999999 5543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-32 Score=248.48 Aligned_cols=216 Identities=17% Similarity=0.242 Sum_probs=170.3
Q ss_pred cCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccc---ccccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSA---CKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
+.|+.-++||+|.|++||++. .++|+.+|+|.+.. ...+.+++.+|+++.+.++|||| ..|+|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 456666789999999999998 55799999998853 23456889999999999999999 4579999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~ 421 (538)
+|.||+|..-+..+. .+++..+-.+++||++||.|+|. ++|||||+||+|+++-. .--+||+|||+|..+.+
T Consensus 91 ~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 91 LVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred cccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 999999987666553 67888899999999999999999 99999999999999953 34589999999987653
Q ss_pred C----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 D----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. ++..+|||+.||+||-++.|..||.+.... .+.+. +..+.+. +++.
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-----rlye~----I~~g~yd--~~~~ 234 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----RLYEQ----IKAGAYD--YPSP 234 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-----HHHHH----HhccccC--CCCc
Confidence 2 889999999999999999999999863322 12111 1112111 1111
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+..+++++.+++ +|+..||++|.|+.|.++
T Consensus 235 -~w~~is~~Ak~Lvr---rML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 235 -EWDTVTPEAKSLIR---RMLTVNPKKRITADEALK 266 (355)
T ss_pred -ccCcCCHHHHHHHH---HHhccChhhhccHHHHhC
Confidence 11234567777777 999999999999999875
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=270.10 Aligned_cols=209 Identities=23% Similarity=0.292 Sum_probs=162.9
Q ss_pred eEeecCCceEEEEE-eCCCCEEEEEEcccc-cccHHHHHHHHHHHhcCCCCCCccc-----------EEEeecCCCCHHH
Q 040267 287 VLVSTWTGTTYKAM-LLDGSMLAIKRLSAC-KLGEKQFLLEMKQVGLLKHPNLEKP-----------LVYKYMSNGTLYS 353 (538)
Q Consensus 287 ~ig~G~~g~vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~ni~~~-----------lv~e~~~~gsL~~ 353 (538)
+||+|.||+||-|+ ..+...+|||.+... ....+-+..||.+.++++|+||++| +.||.+|||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 78999999999999 455678999999743 3344568899999999999999665 7999999999999
Q ss_pred HhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcccCC---------
Q 040267 354 LLHSNGNTAL--DWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRLTNG--------- 421 (538)
Q Consensus 354 ~l~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~--------- 421 (538)
+++..=+ ++ .+.+.-.+.+||++||.|||+ ..|||||||-.|||++. .|.+||+|||.++.+.+
T Consensus 662 LLrskWG-PlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT 737 (1226)
T KOG4279|consen 662 LLRSKWG-PLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT 737 (1226)
T ss_pred HHHhccC-CCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence 9986421 34 778888999999999999999 99999999999999974 58999999999885422
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
+|+.++|||||||++.||.||++||........ .+.+-|-++ +. ++.+
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA----------AMFkVGmyK--vH----P~iP 801 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA----------AMFKVGMYK--VH----PPIP 801 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH----------hhhhhccee--cC----CCCc
Confidence 189999999999999999999999975322110 111111111 11 1223
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.....-.++++|+.+||.+||++.++++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 333333444555999999999999999886
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=260.80 Aligned_cols=166 Identities=24% Similarity=0.301 Sum_probs=141.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-------------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-------------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-------------~~~lv 342 (538)
++|+..+.||+|++|.||+|... +++.+|+|.++.... ....+.+|+.++.+++|||| ..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46788889999999999999964 588999999974332 23457789999999999998 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
+||++ ++|.+++..... .+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ-PFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99997 499998876542 68999999999999999999999 99999999999999999999999999987743211
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.+.++|+||||+++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~ 211 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS 211 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4678999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=257.17 Aligned_cols=210 Identities=18% Similarity=0.283 Sum_probs=162.5
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
...||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.++..++|||+ ..++|+||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 34699999999999985 468999999986432 334668899999999999998 35699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 106 ~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 179 (297)
T cd06659 106 TDIVSQT---RLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG 179 (297)
T ss_pred HHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceec
Confidence 9988653 48999999999999999999999 9999999999999999999999999998763221
Q ss_pred -------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 488 (538)
.++.++||||||+++|||++|+.||......+ -.... ....... . ......+..
T Consensus 180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~~~~~-~~~~~~~--~--~~~~~~~~~ 246 (297)
T cd06659 180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--------AMKRL-RDSPPPK--L--KNAHKISPV 246 (297)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHH-hccCCCC--c--cccCCCCHH
Confidence 16778999999999999999999997432211 11111 1100000 0 000112234
Q ss_pred HHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 489 ILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+..+++ +|++.+|++||++.++++.
T Consensus 247 l~~~i~---~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 247 LRDFLE---RMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHH---HHhcCCcccCcCHHHHhhC
Confidence 444444 9999999999999999884
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=264.83 Aligned_cols=226 Identities=20% Similarity=0.296 Sum_probs=166.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------------~~ 339 (538)
+++|...+.||+|++|.||+|.. .+|+.||+|.++... ....++.+|+.++++++|+|| ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46789999999999999999984 568999999986422 234568889999999999998 13
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++++||+++ +|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~-~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhccc-CHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 689999975 888887654 48999999999999999999999 99999999999999999999999999988642
Q ss_pred CC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---
Q 040267 420 NG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS--- 469 (538)
Q Consensus 420 ~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 469 (538)
.. .++.++|||||||++|||++|+.||....... ....+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-----~~~~~~~~~~~~~~ 231 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-----QLNLILGVLGTPSQ 231 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHcCCCCH
Confidence 11 15678999999999999999999997532110 01111111100
Q ss_pred CCccccccccc---------cCCC-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 470 GRIKDVIDKAL---------TGKG-----YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 470 ~~~~~~~d~~l---------~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.+..+.+... .... .+.....+.+++.+||+.+|++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000000 0000 00112335566669999999999999999886
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=260.17 Aligned_cols=215 Identities=22% Similarity=0.325 Sum_probs=164.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
..|...+.||+|+||.||+|... +++.||+|.+.... ...+++.+|+++++.++|||+ ..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 34777889999999999999954 68999999986422 123568899999999999998 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||++ |++.+++.... ..+++..+..++.|++.||.|||+ .+|+|+||+|+||++++++.+||+|||++....
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~ 169 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence 9997 57877776433 258999999999999999999999 999999999999999999999999999886432
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
..++.++||||||+++|||+||+.||...... ........ .. .+.+.
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~--------~~~~~~~~-~~-----~~~~~ 235 (307)
T cd06607 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQ-ND-----SPTLS 235 (307)
T ss_pred CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH--------HHHHHHhc-CC-----CCCCC
Confidence 12567899999999999999999999753211 11111111 00 01111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.. +.+++.+||+.+|++||++.+|+..
T Consensus 236 ~~~~~~~---~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 236 SNDWSDY---FRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred chhhCHH---HHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1112233 4555559999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=257.15 Aligned_cols=215 Identities=20% Similarity=0.342 Sum_probs=166.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||++.. .++..||+|.+.... ...+.+.+|+.++++++|||+ ..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5788889999999999999984 468899999986433 334678899999999999998 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|.+++... .+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~ 172 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence 999999999764 38899999999999999999999 9999999999999999999999999998653211
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++||+++|+.||......+. +......+. +...
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~--------~~~~~~~~~------~~~~-- 236 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--------LYLIATNGT------PELQ-- 236 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh--------eeehhcCCC------CCCC--
Confidence 156789999999999999999999975322110 000000000 0000
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
........+.+++.+||+.+|++||++.+++..
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011112234445559999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=256.68 Aligned_cols=166 Identities=20% Similarity=0.273 Sum_probs=140.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCC-CCCC-----------c-----
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLK-HPNL-----------E----- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~-H~ni-----------~----- 338 (538)
++|+..+.||+|+||.||+|.. .+++.||+|.++.... ....+.+|+.+++.++ |+|+ .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688889999999999999995 4689999999865322 2356888999999995 6998 1
Q ss_pred ccEEEeecCCCCHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEecc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNG---NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFG 414 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg 414 (538)
.|+||||+++ +|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence 4799999985 8998886543 2368999999999999999999999 99999999999999998 8999999999
Q ss_pred CCcccC------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 415 FSRLTN------------------------GDASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 415 ~a~~~~------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
+++... ..++.++||||||+++|||++|..||...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 215 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD 215 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Confidence 876421 11577899999999999999999999753
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=257.75 Aligned_cols=225 Identities=20% Similarity=0.275 Sum_probs=166.1
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
|+..+.||+|++|.||+|.. .+|..||+|++.... ...+.+.+|++++++++|||+ ..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56678999999999999995 479999999986432 223568899999999999998 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
+ ++|.+++.......+++..+.+++.|+++||+|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 156 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY 156 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc
Confidence 5 699999977654468999999999999999999999 9999999999999999999999999998864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC-----------C
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG-----------R 471 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 471 (538)
.++.++||||||+++|||++|+.||....... .+........... .
T Consensus 157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID----QLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHHhhhhhhchh
Confidence 14668999999999999999999997543211 1111111000000 0
Q ss_pred ----ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 472 ----IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 472 ----~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.......... ...+.....+.+++.+|++.+|++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 233 YKPTFPKWARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhcccccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000 000111133455666999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=252.31 Aligned_cols=221 Identities=20% Similarity=0.343 Sum_probs=170.0
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+|+..+.||+|++|.||++... +++.||+|.+.... ...+++.+|++++++++|||| ..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677788999999999999965 68999999987543 334678999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++++|.+++.... ..+++....+++.|++.||+|||+ ..+++|+||||+||++++++.++|+|||.+.....
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 158 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence 9999999998653 368999999999999999999997 36899999999999999999999999998764321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||||+++|+|++|+.||...... .......+....... .+.+.....
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~ 229 (265)
T cd06605 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEP------PPRLPSGKF 229 (265)
T ss_pred ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc---cccHHHHHHHHhcCC------CCCCChhhc
Confidence 2677899999999999999999999753211 112222222222111 011111112
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.++. +++.+||..+|++|||+.+++..
T Consensus 230 ~~~~~---~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 230 SPDFQ---DFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CHHHH---HHHHHHcCCCchhCcCHHHHhhC
Confidence 33444 44559999999999999999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=258.86 Aligned_cols=230 Identities=22% Similarity=0.288 Sum_probs=166.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|+..+.||+|++|.||+|... +++.||+|.++... ...+.+.+|++++++++|+|| ..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36788899999999999999964 58899999986532 234678999999999999999 3579999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|++++.+..+..... .+++.++..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEASPG--GLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 999877776665443 58999999999999999999999 9999999999999999999999999998764321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH--------HHHhccCC
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI--------DQLSSSGR 471 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 471 (538)
.++.++||||||+++|||++|+.||......+... .+.... ........
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLY-LIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHhhhcccCcc
Confidence 25678999999999999999999997533211000 000000 00000000
Q ss_pred c-----ccccccc-ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 472 I-----KDVIDKA-LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 472 ~-----~~~~d~~-l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. .+..++. ....+.......+.+++.+||+.+|++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 0000000 000011111344556666999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=258.14 Aligned_cols=212 Identities=19% Similarity=0.279 Sum_probs=171.4
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
-|..++.||+|-|++|-.|+ .-+|..||||++.+.+. ....+..|++-|+-++||||+ .|||+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 46667889999999999998 45899999999987653 346788999999999999993 4799999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEEeccCCcccCCC--
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~-- 422 (538)
-.+|+|++||.++.. .+.+....+++.||+.|+.|+|+ ..+|||||||+||.+- .-|-+||.|||++..+.+.
T Consensus 99 GD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred cCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 999999999987653 59999999999999999999999 9999999999999764 5689999999999865542
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
..+++||||+||+||.|++|+.||+..++.+ .+..++|-...
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-----------------TLTmImDCKYt 237 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-----------------TLTMIMDCKYT 237 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-----------------hhhhhhccccc
Confidence 4578999999999999999999998655432 22233332221
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.++....+..+|+..|+..||.+|.|.+||..
T Consensus 238 --vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 238 --VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred --CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 22333333444555999999999999998875
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=254.27 Aligned_cols=230 Identities=20% Similarity=0.277 Sum_probs=167.0
Q ss_pred CCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc--cHHHHHHHHHHHhcCC-CCCC-----------cccEEEeec
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLK-HPNL-----------EKPLVYKYM 346 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~e~~ 346 (538)
|+..+.||+|++|.||+|+.. +++.||||++..... ......+|+..+.+++ |+|+ ..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 556788999999999999965 578999999865332 2334567999999999 9999 457999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
+|+|.+++.......+++.++..++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 156 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYT 156 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcC
Confidence 7899999887654468999999999999999999999 9999999999999999999999999998864322
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccc--------cHHHHHHHHhccCCcccc
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG--------NLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||++++||++|+.||......+.... .-..|.............
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence 146789999999999999999999975432211100 000111111111111111
Q ss_pred cccccc---CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALT---GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~---~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+..... ....+.....+.+++.+|++.+|++|||++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 100000 0000011234556666999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=257.34 Aligned_cols=220 Identities=13% Similarity=0.144 Sum_probs=153.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccccc--H----------HHHHHHHHHHhcCCCCCCcc----
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACKLG--E----------KQFLLEMKQVGLLKHPNLEK---- 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~--~----------~~~~~E~~~l~~l~H~ni~~---- 339 (538)
+.|...+.||+|+||.||+|...+ +..+|+|........ . .....+...+..+.|+|+..
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 468888999999999999999644 446677754322111 0 11223344566678998832
Q ss_pred -----------cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 340 -----------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 340 -----------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
++++|++.. ++.+.+.... ..++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcE
Confidence 456666643 6766665543 36788899999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccc-cc
Q 040267 409 RIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGY-KG 457 (538)
Q Consensus 409 kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~-~~ 457 (538)
+|+|||+++.... .++.++|||||||++|||++|+.||......... ..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 9999999864310 1678899999999999999999999864321110 00
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
...++..... .+. ......+.++.++++ .|++.+|++||++.++++.+
T Consensus 246 ~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AKCDFIKRLH-EGK--------IKIKNANKFIYDFIE---CVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHHHHHHHhh-hhh--------hccCCCCHHHHHHHH---HHHhCCCCCCCCHHHHHHhh
Confidence 1112222111 111 111122345555555 99999999999999999876
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=255.79 Aligned_cols=219 Identities=22% Similarity=0.356 Sum_probs=171.6
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
..+++|+..+.||+|++|.||+|... ++..|++|.++......+.+.+|+++++.++|+|+ ..++++|
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 35566788889999999999999965 68899999997654446678999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.++|+|||++.....
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999998764 369999999999999999999999 9999999999999999999999999997653211
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++||||||+++|||++|+.||...... ....... ........+
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~~~~~---- 238 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RALFLIT-TKGIPPLKN---- 238 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-hcCCCCCcc----
Confidence 1577899999999999999999999743221 1111111 111111000
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+..+. +++.+|++.+|.+|||+.+|++
T Consensus 239 ~~~~~~~l~---~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 PEKWSPEFK---DFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hhhCCHHHH---HHHHHHhccChhhCcCHHHHhh
Confidence 111223444 4555999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=261.57 Aligned_cols=165 Identities=25% Similarity=0.334 Sum_probs=142.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------K 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------~ 339 (538)
.++|+..+.||+|++|.||+|.. .++..||+|++.... ...+.+.+|+.++++++||||. .
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36788889999999999999994 469999999987532 2346678899999999999982 3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++|+||+. |+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 69999996 69999987654 58999999999999999999999 99999999999999999999999999988643
Q ss_pred C----------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 420 N----------------------------GDASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 420 ~----------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
. ..++.++||||||+++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~ 215 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK 215 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC
Confidence 1 01567899999999999999999999754
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=253.25 Aligned_cols=226 Identities=18% Similarity=0.228 Sum_probs=167.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|...+.||+|++|.||+|.. .+|..||+|++.... ...+.+.+|+.++++++|||+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 467778999999999999995 468999999987533 234678999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+ +++|.+++.... ..+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 9 999999987644 369999999999999999999999 9999999999999999999999999998774321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC----------
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG---------- 470 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------- 470 (538)
.++.++||||+|++++||+||+.||......+ ...++.......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE-----QLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH-----HHHHHHHHcCCCChHHHhhccC
Confidence 14678999999999999999988876433211 111111110000
Q ss_pred --CccccccccccC----CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 471 --RIKDVIDKALTG----KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 471 --~~~~~~d~~l~~----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+..+.-.. +..++....+.+++.+|++.+|++|||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000 0000112344555559999999999999999863
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=256.01 Aligned_cols=212 Identities=21% Similarity=0.314 Sum_probs=166.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|++|.||++... +++.||+|.+.... ...+.+.+|++++++++|||| ..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36788899999999999999954 68999999986532 224568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++++|.+++.... .+++..+..++.|++.||.|||+ .+|+|+||+|+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 81 EYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC
Confidence 9999999999998765 68999999999999999999999 9999999999999999999999999999875422
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
..+.++||||||+++|||++|+.||...... ........+.. .+. .
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~------~~~-~ 219 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---------QIYEKILEGKV------RFP-S 219 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHhcCCc------cCC-c
Confidence 1567899999999999999999999753211 01111111111 111 1
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
..+..+..+++ +||+.||.+|| +++|+++
T Consensus 220 ~~~~~l~~li~---~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 220 FFSPDAKDLIR---NLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred cCCHHHHHHHH---HHccCCHHHccCcccCCHHHHHc
Confidence 12344455555 99999999999 6667664
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=260.67 Aligned_cols=217 Identities=19% Similarity=0.282 Sum_probs=175.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc----cHHHHHHHHHHHhcCC-CCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL----GEKQFLLEMKQVGLLK-HPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-H~ni-----------~~~l 341 (538)
...|...+.||+|.||.||+++.+ +|+.+|+|.+.+... ..+.+.+|+++|+++. |||| ..++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 445777789999999999999955 599999999976432 3467999999999998 9999 4469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC----CCeEEEeccCCc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED----FDARIMDFGFSR 417 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~ 417 (538)
|||++.||.|.+.+... .+++..+..++.|++.|+.|||+ .+|+||||||+|+|+... +.+|++|||++.
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999999876 29999999999999999999999 999999999999999643 579999999998
Q ss_pred ccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 418 LTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 418 ~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
..... ++.++||||+||++|.|++|..||......+... .+..+++ ++
T Consensus 188 ~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---------~i~~~~~-~f 257 (382)
T KOG0032|consen 188 FIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL---------AILRGDF-DF 257 (382)
T ss_pred EccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH---------HHHcCCC-CC
Confidence 76542 8899999999999999999999999755432111 1122222 11
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
-++.+ +..++.+.++++ .++..||.+|+|+.++++.
T Consensus 258 ~~~~w--~~is~~akd~i~---~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 258 TSEPW--DDISESAKDFIR---KLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCCc--cccCHHHHHHHH---HhcccCcccCCCHHHHhcC
Confidence 11111 123456777777 9999999999999999984
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=261.47 Aligned_cols=160 Identities=23% Similarity=0.269 Sum_probs=134.4
Q ss_pred eEeec--CCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 287 VLVST--WTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 287 ~ig~G--~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
.||+| +||+||++.. .+|+.||+|.+..... ..+.+.+|+.+++.++|||| ..++|+||+++|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 8899999995 5799999999875332 23568899999999999999 335899999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc----------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT---------- 419 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~---------- 419 (538)
+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++||+.+...
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 99999987654468999999999999999999999 99999999999999999999999999642210
Q ss_pred --------------C--------CCCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 420 --------------N--------GDASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 420 --------------~--------~~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
. ..++.++|||||||++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 0 11467899999999999999999999754
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=249.71 Aligned_cols=215 Identities=21% Similarity=0.271 Sum_probs=168.5
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||+|++|.||++.. .+++.+|+|.+.... ....++.+|++++++++|+|| ..++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477788999999999999984 468899999987532 234567889999999999999 34699999
Q ss_pred cCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 346 MSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
+++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999987632 2468999999999999999999999 9999999999999999999999999998875432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|+||||+++|||++|+.||...... .... ....+....
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~-~~~~~~~~~-------- 220 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------DLRY-KVQRGKYPP-------- 220 (256)
T ss_pred cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHH-HHhcCCCCC--------
Confidence 1567899999999999999999999753221 1111 111111111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
........+.+++.+|++.+|++|||+.|+++.
T Consensus 221 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 221 -IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred -CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111223345556669999999999999999863
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=246.23 Aligned_cols=219 Identities=25% Similarity=0.407 Sum_probs=170.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|+..+.||+|++|.||+|... +++.||+|++.... ...+.+.+|++.+.+++|+|+ ..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999965 59999999987543 235679999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
+++++|.+++.... .+++..+.+++.|+++|++|||+. .+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 81 MDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 99999999998654 689999999999999999999972 78999999999999999999999999988754321
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++||||||+++|||+||+.||..... ....+....... ... +....
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~-~~~-----~~~~~ 225 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICD-GPP-----PSLPA 225 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhc-CCC-----CCCCc
Confidence 46689999999999999999999975432 011111111111 111 11111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+..+. +++.+|++.+|++|||+.|+++.
T Consensus 226 ~~~~~~l~---~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 226 EEFSPEFR---DFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ccCCHHHH---HHHHHHccCChhhCCCHHHHHhC
Confidence 11233444 44459999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=257.77 Aligned_cols=215 Identities=21% Similarity=0.301 Sum_probs=164.3
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
|...+.||+|+||.||+++. .++..||+|.+.... ....++.+|++++++++|+|+ ..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 55668899999999999995 468899999986432 123468899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
++ |+|.+.+.... ..+++.++..++.+++.||.|||+ .+|+||||+|+||+++.++.+||+|||++.....
T Consensus 107 ~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (317)
T cd06635 107 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSF 181 (317)
T ss_pred CC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCcccc
Confidence 97 58888776543 358999999999999999999999 9999999999999999999999999998764321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... .........+. +.....
T Consensus 182 ~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~------~~~~~~ 247 (317)
T cd06635 182 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNES------PTLQSN 247 (317)
T ss_pred cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhccC------CCCCCc
Confidence 2567899999999999999999998743211 11111111110 111111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
..+..+.. ++.+|++.+|.+||++.+|++.+-
T Consensus 248 ~~~~~l~~---li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 248 EWSDYFRN---FVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred cccHHHHH---HHHHHccCCcccCcCHHHHHhChh
Confidence 22334444 455999999999999999998643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=259.82 Aligned_cols=236 Identities=19% Similarity=0.292 Sum_probs=170.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc---cccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||+||+|.. .+++.||||.++.. .....++.+|+.+++.++|+||.
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 34688889999999999999994 56899999998642 22345678899999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++|+||+. ++|.+++...+ .+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 479999996 68999987654 69999999999999999999999 9999999999999999999999999999874
Q ss_pred cCC------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHH-------HHh
Q 040267 419 TNG------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWID-------QLS 467 (538)
Q Consensus 419 ~~~------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-------~~~ 467 (538)
... .++.++|||||||++|||++|+.||.......... .+..... ...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLK-LITELLGSPSEEDLGFI 236 (337)
T ss_pred cCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHH-HHHHHhCCCChHHhhhc
Confidence 321 15678999999999999999999997532111000 0000000 000
Q ss_pred ccCCccccc-------cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHhHH
Q 040267 468 SSGRIKDVI-------DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSIAE 522 (538)
Q Consensus 468 ~~~~~~~~~-------d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i~~ 522 (538)
........+ +..... ..+.....+.+++.+|++.+|++|||++|+++. ++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred CchhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 000000000 000000 001112334556669999999999999999976 655433
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=244.09 Aligned_cols=215 Identities=22% Similarity=0.357 Sum_probs=169.5
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc-cHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL-GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
+|+..+.||+|++|.||++... ++..+++|++..... ..+.+.+|++.+++++|+|+ ..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4677789999999999999965 688999999976443 45779999999999999998 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-----
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD----- 422 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----- 422 (538)
+++|.+++.... ..+++..+..++.+++.||+|||+ .+++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence 999999998753 368999999999999999999999 99999999999999999999999999988765321
Q ss_pred -----------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 423 -----------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 423 -----------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.+.++||||||+++|+|++|+.||..... ......... ........ ....
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~~~~~~----~~~~ 223 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP--------MKALFKIAT-NGPPGLRN----PEKW 223 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch--------HHHHHHHHh-cCCCCcCc----cccc
Confidence 47789999999999999999999975321 111111111 11111111 1111
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+..+.+ ++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~---~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 224 SDEFKD---FLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CHHHHH---HHHHHccCChhhCCCHHHHhc
Confidence 334444 445999999999999999975
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=259.91 Aligned_cols=164 Identities=23% Similarity=0.314 Sum_probs=141.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE--------------- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~--------------- 338 (538)
..++|+..+.||+|+||.||+|.. .+++.||+|.+.... ...+++.+|+.++++++|+|+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 346788899999999999999994 478999999986422 2235677899999999999982
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++||||+. ++|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 269999996 488888764 28889999999999999999999 99999999999999999999999999998
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
+.... .++.++|||||||++|+|++|+.||...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred eeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 75322 1677899999999999999999999754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=251.85 Aligned_cols=223 Identities=20% Similarity=0.228 Sum_probs=162.6
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCC-CCCC-------------cccEEEe
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLK-HPNL-------------EKPLVYK 344 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-H~ni-------------~~~lv~e 344 (538)
|+..+.||+|+||.||+|.. .+++.||+|.++... .......+|+.++.++. |+|+ ..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 45667899999999999994 468999999987532 22334567999999985 9998 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|++ |+|.+++.... ..+++.++..++.|++.||+|||+ .+++||||||+||+++. +.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 997 58888887643 368999999999999999999999 99999999999999999 9999999998874321
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh-----------ccC
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS-----------SSG 470 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 470 (538)
.++.++|||||||++|||++|+.||......+ ...+..... ...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-----QIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-----HHHHHHHHcCCCCHHHHHhhccc
Confidence 14678999999999999999999997543221 111111111 000
Q ss_pred CccccccccccCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 471 RIKDVIDKALTGKG----YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 471 ~~~~~~d~~l~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.......+...+.. .......+.+++.+|++++|++|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00000000000000 0112344566666999999999999999976
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=254.88 Aligned_cols=230 Identities=19% Similarity=0.276 Sum_probs=166.9
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+|+..+.||.|++|.||+|+.. +|..||+|.++... ...+.+.+|+.++++++|+|+ ..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5778899999999999999964 68899999987532 234567889999999999998 347999999
Q ss_pred CCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 347 SNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
++ +|.+++.... ...+++..+.+++.|++.||+|||+ .+++|+||||+||++++++.++|+|||++.....
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 85 8998887543 2468999999999999999999999 9999999999999999999999999998863211
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH--------HHHhccCCcc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI--------DQLSSSGRIK 473 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 473 (538)
.++.++||||||+++|||++|+.||......+.... +.... ........+.
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLK-IFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHH-HHHHhCCCChhhHHHHhcCchhc
Confidence 146789999999999999999999986443221110 00000 0000000000
Q ss_pred ccccccc---cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKAL---TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+.... .....+.....+.+++.+|++.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000 00000111233455666999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-30 Score=255.64 Aligned_cols=166 Identities=23% Similarity=0.290 Sum_probs=140.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|+..+.||+|+||.||+|.. .+++.||||.+.... .....+.+|++++++++||||.
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34688889999999999999995 468999999986422 2234567899999999999981
Q ss_pred ---ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 ---KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 ---~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++||||+.+ +|.+++.... ..+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 1799999975 8888886543 258999999999999999999999 8999999999999999999999999998
Q ss_pred CcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 416 SRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 416 a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
+..... .++.++||||||+++|||+||+.||...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 863311 1467899999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=250.33 Aligned_cols=211 Identities=18% Similarity=0.304 Sum_probs=164.4
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
|..-+.||+|++|.||++.. .+++.+++|.++... ...+.+.+|+.+++.++|||+ ..++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44457899999999999984 568899999986433 234568899999999999998 34689999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
++|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||.+.....
T Consensus 101 ~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~ 174 (285)
T cd06648 101 GALTDIVTHT---RMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKS 174 (285)
T ss_pred CCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccc
Confidence 9999999873 48999999999999999999999 9999999999999999999999999998753221
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC-CC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG-KG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~ 484 (538)
.++.++||||||+++|||++|+.||..... ......... .. .+.... ..
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--------~~~~~~~~~-~~-----~~~~~~~~~ 240 (285)
T cd06648 175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--------LQAMKRIRD-NL-----PPKLKNLHK 240 (285)
T ss_pred ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHh-cC-----CCCCccccc
Confidence 167889999999999999999999974221 112221111 10 011111 11
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.. +.+++.+||+.+|++|||+.++++
T Consensus 241 ~~~~---l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPR---LRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHH---HHHHHHHHcccChhhCcCHHHHcc
Confidence 2234 444555999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=257.83 Aligned_cols=221 Identities=18% Similarity=0.170 Sum_probs=157.1
Q ss_pred EeecCCceEEEEEeCCCCEEEEEEcccc---cccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHHH
Q 040267 288 LVSTWTGTTYKAMLLDGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYS 353 (538)
Q Consensus 288 ig~G~~g~vy~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~~ 353 (538)
+|.|+++.||++.. +++.||+|+++.. ....+.+.+|+++++.++|+|| ..+++|||+++|+|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 34444444444444 7899999998653 2334678999999999999999 3469999999999999
Q ss_pred HhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-------------
Q 040267 354 LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------------- 420 (538)
Q Consensus 354 ~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------------- 420 (538)
++.......+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+....
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 165 (314)
T cd08216 89 LLKTHFPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP 165 (314)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence 9987544468999999999999999999999 999999999999999999999999999774221
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH----hcc-------C
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL----SSS-------G 470 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~-------~ 470 (538)
..++.++|||||||++|||++|+.||........ +.+..... ... .
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM----LLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhccCccccccCchhhhcC
Confidence 0156789999999999999999999985332111 11100000 000 0
Q ss_pred Cccc----ccccccc----CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 471 RIKD----VIDKALT----GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 471 ~~~~----~~d~~l~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.... ..++... ..........+.+++.+||+.||++|||++++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 0000000 00011112345566669999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=253.57 Aligned_cols=209 Identities=20% Similarity=0.283 Sum_probs=155.2
Q ss_pred eEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhc---CCCCCC-----------cccEEEeecC
Q 040267 287 VLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGL---LKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~---l~H~ni-----------~~~lv~e~~~ 347 (538)
+||+|+||.||++.. .+++.+|+|.+..... ....+.+|..++.. .+|||+ ..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 4689999998864321 12334455544433 468998 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.++|+|||++.....
T Consensus 81 ~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (279)
T cd05633 81 GGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (279)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence 999999998665 59999999999999999999999 9999999999999999999999999998853211
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||++|+.||....... . ......... .+..+. +..
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~-~~~~~~~~~------~~~~~~-~~~ 222 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----K-HEIDRMTLT------VNVELP-DSF 222 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC-----H-HHHHHHhhc------CCcCCc-ccc
Confidence 15678999999999999999999997532211 1 111111100 011111 112
Q ss_pred HHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
+.++.++++ +|++.||++|| |+.|+++.
T Consensus 223 ~~~~~~li~---~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 223 SPELKSLLE---GLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CHHHHHHHH---HHhcCCHHHhcCCCCCCHHHHHhC
Confidence 334555555 99999999999 59888774
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=245.09 Aligned_cols=214 Identities=24% Similarity=0.377 Sum_probs=168.9
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC---------c----ccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL---------E----KPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni---------~----~~lv~ 343 (538)
+|+..+.||+|++|.||+|... ++..|++|.+.... ...+.+.+|++.+++++|+|+ . .++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999965 68999999987544 335678999999999999999 1 45899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998765 69999999999999999999999 99999999999999999999999999987744321
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.+.++||||||+++++|++|+.||..... ................
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~---- 224 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-------PMAALYKIGSSGEPPE---- 224 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------hHHHHHhccccCCCcC----
Confidence 56789999999999999999999975331 1111111111011111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+ ....+.. +.+++.+|++.+|++||++.|+++
T Consensus 225 -~-~~~~~~~---l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 -I-PEHLSEE---AKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -C-CcccCHH---HHHHHHHhCcCChhhCCCHHHHhh
Confidence 1 1112334 444555999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=256.60 Aligned_cols=220 Identities=17% Similarity=0.267 Sum_probs=160.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCC-CCCCc-----------ccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLK-HPNLE-----------KPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-H~ni~-----------~~lv~e~ 345 (538)
+|...+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++.++. |+||+ .+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 445557899999999999995 468999999987532 23456889999999996 99993 3588999
Q ss_pred cCCCCHHHHh---hcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 346 MSNGTLYSLL---HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 346 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+.. ++.++. .......+++..+.+++.+++.||+|||+ ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 555543 32223469999999999999999999997 14899999999999999999999999998863211
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++|||||||++|||++|+.||.... ....-+..... +. .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~-~~-----~ 228 (288)
T cd06616 162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVK-GD-----P 228 (288)
T ss_pred CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcC-CC-----C
Confidence 25678999999999999999999997422 11111111111 10 1
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.+...........+.+++.+|++.+|++|||+.+|++.
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111122234455559999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=287.31 Aligned_cols=218 Identities=26% Similarity=0.377 Sum_probs=174.9
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCccc----------
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLEKP---------- 340 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~~~---------- 340 (538)
+...+-+|....+||.|.||.||.|. .++|...|+|-++... ...+...+|+.++..+.|||+++|
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 34456678889999999999999999 6779999999986432 334568899999999999999554
Q ss_pred -EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 341 -LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 341 -lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|.||||++|+|.+.+...+ ..++.....+..|++.|++|||+ .+||||||||+||+||.+|.+|++|||.|..+
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEe
Confidence 7899999999999998765 46777778889999999999999 99999999999999999999999999999865
Q ss_pred CCC------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh-c
Q 040267 420 NGD------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS-S 468 (538)
Q Consensus 420 ~~~------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~ 468 (538)
... ..-++||||+|||++||+||+.||..... +|...+. .
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---------e~aIMy~V~ 1455 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---------EWAIMYHVA 1455 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---------hhHHHhHHh
Confidence 432 33478999999999999999999985332 2333221 1
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.|.... + ++..+.+-.++++ +|++.||.+|.++.|+++
T Consensus 1456 ~gh~Pq-----~-P~~ls~~g~dFle---~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1456 AGHKPQ-----I-PERLSSEGRDFLE---HCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ccCCCC-----C-chhhhHhHHHHHH---HHHhcCchhhhHHHHHHH
Confidence 122211 1 1124567788888 999999999998887654
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=248.46 Aligned_cols=227 Identities=21% Similarity=0.274 Sum_probs=165.4
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
|...+.||.|++|.||+|.. .+++.+++|.++.... ....+.+|++++++++|+|+ ..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 45667899999999999995 4688999999875332 24678899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+.....
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~ 155 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY 155 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccc
Confidence 75 8888887653 368999999999999999999999 9999999999999999999999999998753321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc-----
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID----- 477 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----- 477 (538)
..+.++||||||+++|+|+||+.||......+.... +...+... .........+
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~ 233 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK-IFRTLGTP-DPEVWPKFTSLARNY 233 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHcCCC-chHhcccchhhhhhh
Confidence 256789999999999999999999975432211000 00000000 0000000000
Q ss_pred ------cccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 478 ------KALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 478 ------~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... ....+.....+.+++.+||+.||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000 0001112334556666999999999999999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-30 Score=247.03 Aligned_cols=212 Identities=24% Similarity=0.393 Sum_probs=167.4
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|+..+.||+|++|.||++... +++.||+|.+..... ..+.+.+|++++++++|+|+ ..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4677889999999999999854 588999999976542 34678999999999999998 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
+++++|.+++.... .+++..+..++.|++.||.|||+ .+|+|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 99999999998764 68999999999999999999999 99999999999999999999999999988754321
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.+.++||||+|+++|+|++|+.||...... ...| .... ... +.+.
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~------~~~~--~~~~-~~~-----~~~~- 220 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM------AALF--RIVQ-DDH-----PPLP- 220 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH------HHHH--HHhc-cCC-----CCCC-
Confidence 467899999999999999999999743210 0011 1111 110 1111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++.+. +++.+|++.+|++|||+.+++.
T Consensus 221 ~~~~~~~~---~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 221 EGISPELK---DFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCHHHH---HHHHHHHhCChhhCcCHHHHhc
Confidence 11233444 4445999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=253.90 Aligned_cols=166 Identities=25% Similarity=0.305 Sum_probs=141.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-------------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-------------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-------------~~~l 341 (538)
.++|+..+.||+|+||.||+|.. .+|+.||+|.++.... ....+.+|+.++++++|+|+ ..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 45788899999999999999995 4689999999864321 23456789999999999998 2369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++ +|.+++.... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++.....
T Consensus 86 v~e~~~~-~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999974 8988887643 368999999999999999999999 9999999999999999999999999998874321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++||||||+++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1567899999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=259.40 Aligned_cols=210 Identities=19% Similarity=0.294 Sum_probs=167.2
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEccc---ccccHHHHHHHHHHHhcCC-CCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSA---CKLGEKQFLLEMKQVGLLK-HPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~e~ 345 (538)
.|++.+.||+||.+.||++...+.+.+|+|++.. +.....-|.+|+..|.+++ |.+| ..||||||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~ 441 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC 441 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec
Confidence 4777889999999999999988889999998864 2344567999999999995 8888 44799999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
-+. +|.++|.+.......| .+..+..|++.|+.++|+ .+|||.||||.|+|+-. |.+||+|||+|..+..+
T Consensus 442 Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 442 GDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred ccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEe-eeEEeeeechhcccCccccc
Confidence 754 9999999877544556 778899999999999999 99999999999999865 69999999999865432
Q ss_pred ---------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 423 ---------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 423 ---------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
++.++||||+||+||+|+.|+.||... .-.|.
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~---------~n~~a------ 580 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI---------INQIA------ 580 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH---------HHHHH------
Confidence 678999999999999999999999741 11122
Q ss_pred CCccccccccccCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 470 GRIKDVIDKALTGKG----YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
++..+.||...-++ ...+ +++++..||+.||.+|||..|+++
T Consensus 581 -Kl~aI~~P~~~Iefp~~~~~~~---li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 -KLHAITDPNHEIEFPDIPENDE---LIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -HHHhhcCCCccccccCCCCchH---HHHHHHHHHhcCcccCCCcHHHhc
Confidence 23344555332222 1223 566666999999999999999987
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=246.10 Aligned_cols=209 Identities=22% Similarity=0.315 Sum_probs=161.1
Q ss_pred EeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 288 LVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 288 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
||.|+||.||++... +|+.+|+|.+.... ...+.+.+|++++.+++|+|+ ..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 588999999999965 49999999986543 234568899999999999999 34799999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++...+ .+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99998755 58999999999999999999999 9999999999999999999999999998763211
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
..+.++||||||+++||+++|+.||...... ........ +... . .
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~----~-~ 221 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILN-GKIE----W-P 221 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhc-CCcC----C-C
Confidence 1456899999999999999999999753221 11111111 1110 0 0
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
.....+..+..+++ +|++.+|++|||+.+|.+.|+
T Consensus 222 ~~~~~~~~~~~~i~---~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 222 EDVEVSDEAIDLIS---KLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ccccCCHHHHHHHH---HHhcCCHhhcCCCccHHHHhc
Confidence 00001334444444 999999999999966555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=252.99 Aligned_cols=166 Identities=19% Similarity=0.264 Sum_probs=139.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|+..+.||+|.+|.||+|... +++.||+|.++... ...+.+.+|++++++++|+|+ ..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999954 68999999986432 223568899999999999999 4569999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcccCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~-- 421 (538)
|++ ++|.+++.......+++.....++.||+.||+|||+ .+++|+||||+||+++. ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 588888876554456888889999999999999999 99999999999999985 56799999998864310
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
.++.++||||||+++|||+||+.||...
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 158 RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1467899999999999999999999754
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=252.76 Aligned_cols=224 Identities=24% Similarity=0.268 Sum_probs=166.1
Q ss_pred CCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-------------cccEEEe
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-------------EKPLVYK 344 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~e 344 (538)
|+..+.||+|++|.||+|... +++.+|+|.+.... .....+.+|++++++++|+|+ ..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456688999999999999965 58899999997642 234568899999999999998 2469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9975 8999887653 368999999999999999999999 8999999999999999999999999998874321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---CCcccc-
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS---GRIKDV- 475 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 475 (538)
.++.++||||||+++|||+||+.||........ ...+...... ......
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ-----LEKIFELCGSPTDENWPGVS 230 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHHHHhCCCchhhccccc
Confidence 156789999999999999999999975432111 1111110000 000000
Q ss_pred -------------ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 -------------IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 -------------~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.......+...+.+++.+|++.+|.+||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000001345666777999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=245.15 Aligned_cols=202 Identities=16% Similarity=0.259 Sum_probs=157.7
Q ss_pred EeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 288 LVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 288 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
||.|++|.||+++.. +++.||+|.+.... ...+.+.+|+++++.++|||| ..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999964 48999999986532 234678999999999999999 34699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||.+.....
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 155 (262)
T cd05572 81 WTILRDRG--LFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGT 155 (262)
T ss_pred HHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCC
Confidence 99998754 58999999999999999999999 9999999999999999999999999999875432
Q ss_pred ------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHH
Q 040267 422 ------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEI 489 (538)
Q Consensus 422 ------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 489 (538)
.++.++|+||||+++|||++|+.||..... ............... ... ....++++
T Consensus 156 ~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~-----~~~-~~~~~~~~ 223 (262)
T cd05572 156 PEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNGK-----LEF-PNYIDKAA 223 (262)
T ss_pred cCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCCC-----CCC-CcccCHHH
Confidence 156789999999999999999999975431 111222221110000 000 11113344
Q ss_pred HHHHHHHhHccCCCCCCCCC
Q 040267 490 LQFLQIACKCVAVRPKEKWS 509 (538)
Q Consensus 490 ~~l~~l~~~cl~~dP~~RPs 509 (538)
.+++.+||+.+|++||+
T Consensus 224 ---~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 224 ---KDLIKQLLRRNPEERLG 240 (262)
T ss_pred ---HHHHHHHccCChhhCcC
Confidence 44555999999999999
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=248.78 Aligned_cols=210 Identities=19% Similarity=0.246 Sum_probs=159.4
Q ss_pred EeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 288 LVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 288 ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
||+|+||.||++.. .+|+.||+|.+.... .....+.+|+++++.++|||+ ..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999984 468999999986422 223456789999999999998 35699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.......+++.++..++.|++.||.|||+ .+++|+||+|+||++++++.+||+|||.+.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGT 157 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCC
Confidence 999987654568999999999999999999999 9999999999999999999999999998864321
Q ss_pred ------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHH
Q 040267 422 ------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEI 489 (538)
Q Consensus 422 ------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 489 (538)
.++.++||||||+++|+|++|+.||........ ........... .... ....+..+
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~------~~~~-~~~~~~~~ 225 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-----KEELKRRTLEM------AVEY-PDKFSPEA 225 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-----HHHHHhccccc------cccC-CccCCHHH
Confidence 156789999999999999999999975332110 00011100000 0001 11123345
Q ss_pred HHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 490 LQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 490 ~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
.++++ +||+.+|++|| ++.++++
T Consensus 226 ~~li~---~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 226 KDLCE---ALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHH---HHccCChhHccCCCcccHHHHHh
Confidence 55555 99999999999 5555553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=247.11 Aligned_cols=215 Identities=21% Similarity=0.328 Sum_probs=169.3
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+|...+.||+|++|.||++... ++..+|+|++.... ...+++.+|+++++.++|+|+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4677789999999999999954 68899999997543 334678899999999999998 33589999
Q ss_pred cCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 346 MSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
+++++|.+++.... ...+++.++..++.+++.||+|||+ .+++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998653 3479999999999999999999999 8999999999999999999999999998875322
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++||||+|+++++|++|+.||..... ......... ..... +
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~~~-----~ 223 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--------LELALKILK-GQYPP-----I 223 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--------HHHHHHHhc-CCCCC-----C
Confidence 156789999999999999999999975321 111111111 11111 1
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ...+..+ .+++.+||..+|++|||+.|+++.
T Consensus 224 ~-~~~~~~~---~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 224 P-SQYSSEL---RNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred C-CCCCHHH---HHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1122344 445559999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=247.92 Aligned_cols=226 Identities=20% Similarity=0.259 Sum_probs=164.1
Q ss_pred CCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcC---CCCCC-----------c-----
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLL---KHPNL-----------E----- 338 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l---~H~ni-----------~----- 338 (538)
|+..+.||+|++|.||+|... +++.||+|.++.... ....+.+|+.++.++ .|+|+ .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456788999999999999975 489999999974322 234566788777666 59998 2
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.+++|||+.+ +|.+++.......+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||.+..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 6799999974 89998876554469999999999999999999999 9999999999999999999999999998865
Q ss_pred cCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc----
Q 040267 419 TNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI---- 472 (538)
Q Consensus 419 ~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 472 (538)
... .++.++||||||+++|||++|+.||......+ .+..+..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD----QLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH----HHHHHHHHcCCCChHhcCC
Confidence 421 15678999999999999999999987543321 111111111000000
Q ss_pred -----cccccccccC---CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 473 -----KDVIDKALTG---KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 473 -----~~~~d~~l~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.......... ...++....+.+++.+||+.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000000 001112234556667999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=257.47 Aligned_cols=172 Identities=23% Similarity=0.332 Sum_probs=145.8
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc--------
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
...++...+++|...+.||+|+||.||+|. ..+++.||+|+++... ...+.+.+|+.++.+++||||.
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 345677788999999999999999999998 4578999999997532 2245688899999999999982
Q ss_pred ---------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 339 ---------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 339 ---------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
.+++++++ +++|.+++... .+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEE
Confidence 24666665 78999888654 48999999999999999999999 9999999999999999999999
Q ss_pred EEeccCCcccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 410 IMDFGFSRLTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 410 l~Dfg~a~~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
|+|||+++.... .++.++|||||||++|||++|+.||...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 221 (345)
T cd07877 161 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 221 (345)
T ss_pred EecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999874321 1567899999999999999999999643
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=257.27 Aligned_cols=235 Identities=19% Similarity=0.284 Sum_probs=167.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|++++++++||||.
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 37888899999999999999994 568999999986432 2235688999999999999981
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++|+||+.. +|.++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 2689999864 7777653 248999999999999999999999 999999999999999999999999999987
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH-------HHHHHHHhcc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL-------VNWIDQLSSS 469 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~ 469 (538)
.... .++.++|||||||++|||++|+.||............+ ..+.... ..
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 244 (342)
T cd07879 166 HADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL-ED 244 (342)
T ss_pred CCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh-cc
Confidence 4321 15678999999999999999999997533211000000 0000000 00
Q ss_pred CCcccccc--ccccCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHhHH
Q 040267 470 GRIKDVID--KALTGKG----YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSIAE 522 (538)
Q Consensus 470 ~~~~~~~d--~~l~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i~~ 522 (538)
......++ +...... .+.....+.+++.+|++.||++||++.|++.. +++..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000000 0000000 00011234455569999999999999999954 666544
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=248.05 Aligned_cols=213 Identities=21% Similarity=0.269 Sum_probs=165.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc------ccHHHHHHHHHHHhcCCCCCCc-------------c
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK------LGEKQFLLEMKQVGLLKHPNLE-------------K 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~H~ni~-------------~ 339 (538)
.+|...+.||+|++|.||+|.. .++..||+|.+.... .....+.+|++++++++|+||. .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999994 568999999875321 2235688999999999999992 3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++++||+++++|.+++...+ .+++....+++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 58999999999999998655 48899999999999999999999 99999999999999999999999999988643
Q ss_pred CC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. ..+.++|||||||++||+++|+.||...... .-+....... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~~ 227 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM--------AAIFKIATQP-TK 227 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--------HHHHHHHcCC-CC
Confidence 11 1567899999999999999999999743211 0011111110 00
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+ .....+++..+++ +|++ +|..||++.+++.
T Consensus 228 ----~~~-p~~~~~~~~~~i~---~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 ----PML-PDGVSDACRDFLK---QIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----CCC-CcccCHHHHHHHH---HHhc-CcccCccHHHHhc
Confidence 111 1223345566666 9999 5799999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-31 Score=247.78 Aligned_cols=213 Identities=19% Similarity=0.321 Sum_probs=172.7
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcc-----------cEEEeecCCC
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK-----------PLVYKYMSNG 349 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~-----------~lv~e~~~~g 349 (538)
|.+.++||+|+||.||+|.+ ..|+.+|||.+... .+.+++..|+.++.+...|++++ ++|||||-.|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 44557899999999999995 46999999998753 34678999999999999999844 4999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------- 422 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------- 422 (538)
++.+.++.+. +.+++.++..+.+..++||+|||. .+=+|||||..|||++.+|.+||+|||.|..+.+.
T Consensus 114 SiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 114 SISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred cHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 9999998765 479999999999999999999999 88899999999999999999999999999866542
Q ss_pred ----------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc-CCCc
Q 040267 423 ----------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT-GKGY 485 (538)
Q Consensus 423 ----------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~ 485 (538)
|..++||||+|++..||..|++||.+-..... .. -+..-..|.++ ++.+
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-----------IF---MIPT~PPPTF~KPE~W 255 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-----------IF---MIPTKPPPTFKKPEEW 255 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-----------eE---eccCCCCCCCCChHhh
Confidence 88999999999999999999999985222100 00 00011112221 2345
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+++..++++ .|+...|++|-|+-++++.
T Consensus 256 S~~F~DFi~---~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 256 SSEFNDFIR---SCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhHHHHHHH---HHhcCCHHHHHHHHHHhhh
Confidence 666666776 9999999999999888763
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=255.43 Aligned_cols=166 Identities=24% Similarity=0.355 Sum_probs=142.4
Q ss_pred HHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc--------------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------- 338 (538)
...++|+..+.||+|+||.||+|. ..++..||||++.... ...+.+.+|++++++++||||.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 356679999999999999999998 4578999999986432 2235688999999999999981
Q ss_pred ---ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 ---KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 ---~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++||||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 26899998 67999888653 48999999999999999999999 9999999999999999999999999999
Q ss_pred CcccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 416 SRLTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 416 a~~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
+..... .++.++||||||+++|++++|+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 165 ARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred ccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 875321 1567899999999999999999999754
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-30 Score=279.33 Aligned_cols=219 Identities=20% Similarity=0.268 Sum_probs=164.6
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC---------------
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL--------------- 337 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni--------------- 337 (538)
-+..++|++..+||+|+||.||+++. -||+.||||++.... .....+.+|++.+++++|||+
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 35567888899999999999999993 489999999997543 334568899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 040267 338 -------------------------------------------------------------------------------- 337 (538)
Q Consensus 338 -------------------------------------------------------------------------------- 337 (538)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -----------------------------------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 040267 338 -----------------------------------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL 382 (538)
Q Consensus 338 -----------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yL 382 (538)
..||-||||+.-.+.++++.+.... .-...++++++|+.||+|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 1258899999988888887765111 3567899999999999999
Q ss_pred hcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---C--------------------------------------
Q 040267 383 HHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN---G-------------------------------------- 421 (538)
Q Consensus 383 H~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~---~-------------------------------------- 421 (538)
|+ .+||||||||.||++|++..+||+|||+|.... .
T Consensus 714 H~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred Hh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 99 999999999999999999999999999998511 0
Q ss_pred ---CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhH
Q 040267 422 ---DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACK 498 (538)
Q Consensus 422 ---~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~ 498 (538)
.|+.|+|+||+|||++||+. ||... ++...+. ..++.+.+..- +. +..+.+..-.+++.+
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts----MERa~iL----~~LR~g~iP~~--~~----f~~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTS----MERASIL----TNLRKGSIPEP--AD----FFDPEHPEEASLIRW 853 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCch----HHHHHHH----HhcccCCCCCC--cc----cccccchHHHHHHHH
Confidence 07889999999999999984 45421 1111111 12223333222 11 111222222344449
Q ss_pred ccCCCCCCCCCHHHHHH
Q 040267 499 CVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 499 cl~~dP~~RPs~~evl~ 515 (538)
+++.||++|||+.|++.
T Consensus 854 Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLN 870 (1351)
T ss_pred HhcCCCccCCCHHHHhh
Confidence 99999999999999885
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=261.29 Aligned_cols=236 Identities=19% Similarity=0.265 Sum_probs=173.7
Q ss_pred CCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------------ccE
Q 040267 282 FSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------------KPL 341 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------------~~l 341 (538)
|...+.||+|+||.||+|+ ..+|+.||||.++... ...+...+|+++|++++|+||+ ..+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4556789999999999999 5679999999997632 4457788999999999999993 348
Q ss_pred EEeecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC--CCC--CeEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD--EDF--DARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~Dfg~a 416 (538)
|||||++|||+..+..-. ...+++.+.+.+..++..||.|||+ ++|+||||||.||++- .+| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999998643 2469999999999999999999999 9999999999999984 334 3699999999
Q ss_pred cccCCC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 417 RLTNGD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 417 ~~~~~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
+.+.++ ++..+|.|||||++||.+||..||........ ..-..|.........+.
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~--~~~~~~~~~tkkp~~v~ 249 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKN--NKEIMWHIITKKPSGVA 249 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccc--cchhhhhhhccCCCcee
Confidence 976543 67789999999999999999999975332211 01122322222211111
Q ss_pred ccccccccC------------CCcHHHHHHHHHHHhHccCCCCCCCC--CHHHHHHHHHHhHH
Q 040267 474 DVIDKALTG------------KGYDDEILQFLQIACKCVAVRPKEKW--SMYQVYISLCSIAE 522 (538)
Q Consensus 474 ~~~d~~l~~------------~~~~~~~~~l~~l~~~cl~~dP~~RP--s~~evl~~L~~i~~ 522 (538)
-..++...+ ...+.....+-+.....+..+|.+|- ...+....+..|..
T Consensus 250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 111111111 11223344455555577788888888 77777777766654
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=249.80 Aligned_cols=168 Identities=27% Similarity=0.328 Sum_probs=142.4
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc--------------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------- 338 (538)
...++|+..+.||+|++|.||+|... +++.||+|.++... .....+.+|++++++++|||+.
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34568889999999999999999964 58899999996432 2335678899999999999992
Q ss_pred -------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeC
Confidence 3589999986 7777776542 368999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 412 DFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 412 Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
|||.+..... ..+.++|||||||++|||++|+.||...
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~ 221 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQAN 221 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9998874311 1467899999999999999999999753
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=252.54 Aligned_cols=213 Identities=21% Similarity=0.297 Sum_probs=162.4
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
|+..+.||+|++|.||+|.. .++..+|+|.+.... ...+++.+|+++++.++|+|+ ..++|+||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 55567899999999999995 468899999986421 223567889999999999998 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+. |++.+++.... ..+++.++..++.|++.|+.|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (308)
T cd06634 97 CL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 171 (308)
T ss_pred cC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCcccc
Confidence 97 68888776443 358999999999999999999999 9999999999999999999999999998774321
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ........ +.. +.....
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~-~~~-----~~~~~~ 237 (308)
T cd06634 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQ-NES-----PALQSG 237 (308)
T ss_pred cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--------HHHHHHhh-cCC-----CCcCcc
Confidence 2567899999999999999999998642211 11111111 111 111111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+..+..+++ +||+.+|++||++.++++.
T Consensus 238 ~~~~~~~~li~---~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 238 HWSEYFRNFVD---SCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred cccHHHHHHHH---HHhhCCcccCCCHHHHhhC
Confidence 23334444444 9999999999999999875
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=249.24 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=165.8
Q ss_pred CCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcC-CCCCC-----------cc
Q 040267 281 NFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLL-KHPNL-----------EK 339 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~H~ni-----------~~ 339 (538)
+|+..+.||+|++|.||++.. .++..||||.++... ...+.+.+|++++.++ +|||+ ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778999999999999984 357889999986432 2235688999999999 59998 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||+++|+|.+++.... .+++.....++.|+++||+|||+ .+++|+||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 59999999999999987654 58999999999999999999999 99999999999999999999999999988642
Q ss_pred CC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. ..+.++||||||+++|||++|..||...... .............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~---- 227 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILKS---- 227 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHcc----
Confidence 11 0456899999999999999999999642211 1111111111111
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
.+.... ..+..+.+ ++.+|++.||++|||+.++.+.|..
T Consensus 228 ---~~~~~~-~~~~~l~~---li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 ---KPPFPK-TMSAEARD---FIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ---CCCCCc-ccCHHHHH---HHHHHhcCCHhhccCcchHHHHhcC
Confidence 011111 12234444 4559999999999999888776654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=254.91 Aligned_cols=234 Identities=19% Similarity=0.266 Sum_probs=169.8
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC------------
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL------------ 337 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni------------ 337 (538)
++...+++|+..+.||+|+||.||+|. ..+++.||+|++.... ...+.+.+|++++.+++|||+
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 344567889999999999999999998 4479999999885422 234678899999999999999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++++||+ +++|.+++... .+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.+.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 245899998 56899888754 47888899999999999999999 999999999999999999999999999886
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH--------HHHHHHHhc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL--------VNWIDQLSS 468 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~ 468 (538)
.... .++.++||||||+++|||+||+.||......... ..+ .+|......
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 157 IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQF-SIITDLLGTPPDDVINTICS 235 (328)
T ss_pred ccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCCHHHHHhccc
Confidence 4321 1567899999999999999999999753321100 000 111111110
Q ss_pred cCCccccccc-cccCCCcH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 469 SGRIKDVIDK-ALTGKGYD-----DEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 469 ~~~~~~~~d~-~l~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. ..+++.. ......+. .....+.+++.+|++.+|++|||+.+++..
T Consensus 236 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 236 EN-TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hh-hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0000000 00000000 012344555669999999999999999865
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=248.54 Aligned_cols=215 Identities=19% Similarity=0.259 Sum_probs=163.5
Q ss_pred CCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcC-CCCCC-----------cc
Q 040267 281 NFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLL-KHPNL-----------EK 339 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~H~ni-----------~~ 339 (538)
+|+..+.||+|+||.||++.. .+|..||+|.++... ...+++.+|++++.++ +|+|| ..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467788999999999999985 368899999986422 2236688899999999 58998 23
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++|+||+++++|.+++.... .+++.....++.|++.||+|||+ .+++||||||+||++++++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 69999999999999998755 58899999999999999999999 99999999999999999999999999988754
Q ss_pred CC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. ..+.++||||||+++|||++|+.||...... .....+........
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~~~~~~~~~~--- 228 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSE--- 228 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc----ccHHHHHHHhhccC---
Confidence 22 1356899999999999999999999642211 11122222111110
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
+... ...+..+.. ++.+|++.||++|| ++.+++.
T Consensus 229 ----~~~~-~~~~~~~~~---ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 ----PPYP-QEMSALAKD---IIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----CCCC-ccCCHHHHH---HHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0010 112234444 44599999999997 6666655
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-30 Score=258.91 Aligned_cols=215 Identities=22% Similarity=0.311 Sum_probs=174.9
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
.....|.....||+|.|+.|..|+. .++..||||.++++... .+.+.+|+++|..+.|||| ..|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 3456788889999999999999994 46999999999875532 3558899999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+.+|.+++++.+.+ .+....+..++.|+.+|++|+|+ +.|+|||||.+||||+.+.++||+|||++..+..
T Consensus 133 V~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecc
Confidence 999999999999999887 46668889999999999999999 9999999999999999999999999999986653
Q ss_pred C-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 D-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. .++++|+||+|+++|-|+.|..||++..-.+.. ..++..
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr-----------------~rvl~g 270 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR-----------------PRVLRG 270 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc-----------------chheee
Confidence 2 678999999999999999999999963322110 001111
Q ss_pred ccc-CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALT-GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.++ ..+...+.+.+++ +.+..+|.+|++++++.+.
T Consensus 271 k~rIp~~ms~dce~lLr---k~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 271 KYRIPFYMSCDCEDLLR---KFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred eecccceeechhHHHHH---HhhccCccccCCHHHhhhh
Confidence 111 1233445555555 9999999999999998763
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=252.72 Aligned_cols=167 Identities=23% Similarity=0.298 Sum_probs=139.2
Q ss_pred CCCCCCeEeecCCceEEEEEeC---CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-------------ccc
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL---DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-------------EKP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-------------~~~ 340 (538)
.|...+.||+|++|.||+|... ++..||+|.+.... ...+.+.+|+.++.+++|||| ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677788999999999999954 47899999997632 223567889999999999998 246
Q ss_pred EEEeecCCCCHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----CCCeEEEec
Q 040267 341 LVYKYMSNGTLYSLLHSNG---NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE----DFDARIMDF 413 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~Df 413 (538)
+||||+++ ++.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 7777765322 2368899999999999999999999 99999999999999999 899999999
Q ss_pred cCCcccCC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 414 GFSRLTNG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 414 g~a~~~~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
|++..... .++.++||||||++++||++|+.||.....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 98774321 146789999999999999999999986443
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=254.92 Aligned_cols=163 Identities=23% Similarity=0.354 Sum_probs=138.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE------------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~------------------- 338 (538)
.+|...+.||.|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++|||+.
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788889999999999999995 568999999986533 3346688999999999999982
Q ss_pred ------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEE
Q 040267 339 ------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIM 411 (538)
Q Consensus 339 ------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 411 (538)
.++|+||++ ++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+|++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEEC
Confidence 258999997 5999888653 48999999999999999999999 9999999999999998 45678999
Q ss_pred eccCCcccC---------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 412 DFGFSRLTN---------------------------GDASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 412 Dfg~a~~~~---------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
|||.++... ..++.++|||||||++|||++|+.||...
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~ 222 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA 222 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999886321 01566899999999999999999999754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=254.81 Aligned_cols=229 Identities=18% Similarity=0.292 Sum_probs=165.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc---cccHHHHHHHHHHHhcC-CCCCC-------------ccc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC---KLGEKQFLLEMKQVGLL-KHPNL-------------EKP 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~H~ni-------------~~~ 340 (538)
.++|+..+.||+|+||.||+|... +++.+|+|++... ......+.+|+.++.++ +|||| ..+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 457888899999999999999954 6889999988542 22335577899999999 99998 236
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||++ ++|.+++... .++|..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++....
T Consensus 86 lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 9999997 5999988764 58899999999999999999999 999999999999999999999999999886321
Q ss_pred C-----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH--------
Q 040267 421 G-----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI-------- 463 (538)
Q Consensus 421 ~-----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-------- 463 (538)
. ..+.++||||||+++|||+||+.||......+... .+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLE-KIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCCHHHH
Confidence 1 14678999999999999999999997533221100 000000
Q ss_pred HHHhccCCccccccccccC------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALTG------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
... .......+++..... .........+.+++.+|++.||++|||+.++++.
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESI-KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHH-HhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000 000000001000000 0000112345556669999999999999999974
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=242.63 Aligned_cols=212 Identities=20% Similarity=0.263 Sum_probs=155.6
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHH-HhcCCCCCC-----------cccEEEeecCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQ-VGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~-l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
+.||+|++|.||+|.. .+++.||+|.++.... ....+..|..+ ....+|+|+ ..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999985 4689999999865321 11234445444 445589998 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
++|.+++.... .+++..+.+++.|++.||.|||+ .+++|+||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (260)
T cd05611 82 GDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGT 156 (260)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCC
Confidence 99999998655 58999999999999999999999 9999999999999999999999999998864321
Q ss_pred ------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHH
Q 040267 422 ------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEI 489 (538)
Q Consensus 422 ------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 489 (538)
.++.++||||||+++|||++|..||...... ....... .+... ..... ....+.++
T Consensus 157 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~--~~~~~-~~~~~~~~ 224 (260)
T cd05611 157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------AVFDNIL-SRRIN--WPEEV-KEFCSPEA 224 (260)
T ss_pred cCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHH-hcccC--CCCcc-cccCCHHH
Confidence 1577899999999999999999999753221 1111111 11100 00000 11123344
Q ss_pred HHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 490 LQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 490 ~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
.++++ +|++.+|++||++.++.+.|
T Consensus 225 ~~~i~---~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 225 VDLIN---RLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHH---HHccCCHHHccCCCcHHHHH
Confidence 44444 99999999999876665443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=247.83 Aligned_cols=207 Identities=18% Similarity=0.298 Sum_probs=160.8
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHH
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLY 352 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~ 352 (538)
.+||+|+||.||++.. .++..||+|.+.... .....+.+|+.+++.++|+|+ ..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5699999999999985 568999999986433 334568899999999999998 346999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----------
Q 040267 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----------- 421 (538)
Q Consensus 353 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----------- 421 (538)
+++... .+++.....++.|++.||+|||+ .+++|+||||+||++++++.++|+|||++.....
T Consensus 106 ~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 179 (292)
T cd06657 106 DIVTHT---RMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179 (292)
T ss_pred HHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccC
Confidence 988653 48999999999999999999999 9999999999999999999999999998753321
Q ss_pred ------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc-CCCcHHH
Q 040267 422 ------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT-GKGYDDE 488 (538)
Q Consensus 422 ------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~ 488 (538)
.++.++||||||+++|||++|+.||...... ..+... ... . ...+. ....+..
T Consensus 180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--------~~~~~~-~~~-~----~~~~~~~~~~~~~ 245 (292)
T cd06657 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMI-RDN-L----PPKLKNLHKVSPS 245 (292)
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-Hhh-C----CcccCCcccCCHH
Confidence 1577899999999999999999999753221 111111 000 0 01110 0112234
Q ss_pred HHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 489 ILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+..+ +.+|++.+|.+||++.++++
T Consensus 246 l~~l---i~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGF---LDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHH---HHHHHhCCcccCcCHHHHhc
Confidence 4444 44999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=246.44 Aligned_cols=208 Identities=20% Similarity=0.268 Sum_probs=154.5
Q ss_pred eEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHH---HHhcCCCCCC-----------cccEEEeecC
Q 040267 287 VLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMK---QVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~---~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
+||+|+||.||+|.. .+++.||+|.+.... .....+..|.. .++...||++ ..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 468999999986432 11223444444 3444578998 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (278)
T cd05606 81 GGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (278)
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence 999999987654 69999999999999999999999 9999999999999999999999999998763321
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||+|+++|||++|+.||........ . ........ .+..+... .
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-----~-~~~~~~~~------~~~~~~~~-~ 222 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----H-EIDRMTLT------MAVELPDS-F 222 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-----H-HHHHHhhc------cCCCCCCc-C
Confidence 156789999999999999999999975322110 0 01111100 11111111 2
Q ss_pred HHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
+..+.++++ +|+..+|++|| ++.|+++
T Consensus 223 s~~~~~li~---~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 223 SPELRSLLE---GLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CHHHHHHHH---HHhhcCHHhccCCCCCCHHHHHh
Confidence 334444444 99999999999 9999985
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=243.60 Aligned_cols=223 Identities=22% Similarity=0.261 Sum_probs=165.5
Q ss_pred CCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
|+..+.||+|.+|.||+|+.. +++.||+|.+.... ...+.+..|+.++++++|+|+ ..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999954 58999999997542 234678899999999999999 356999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
+ ++|.+++.... ..+++..+.+++.+++.||+|||+ .+|+||||+|+||++++++.+||+|||.+.....
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 155 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY 155 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc
Confidence 8 59999998763 259999999999999999999999 9999999999999999999999999998764321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC---------C--
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG---------R-- 471 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 471 (538)
.++.++||||||+++||+++|+.||......+. ...+....... .
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-----LFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-----HHHHHHHhCCCcHHHHHhhcccc
Confidence 156689999999999999999999975432111 01110000000 0
Q ss_pred -ccccccccccCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 472 -IKDVIDKALTGKG----YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 472 -~~~~~d~~l~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...... ...... .+.....+.+++.+|++.+|++||++.+++.
T Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 231 DYKPTFP-KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccc-ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000 000000 0011234556666999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-30 Score=236.47 Aligned_cols=220 Identities=19% Similarity=0.275 Sum_probs=168.9
Q ss_pred HhcCCCCC-CeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC---------------cc
Q 040267 278 ATSNFSAQ-NVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL---------------EK 339 (538)
Q Consensus 278 ~~~~f~~~-~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni---------------~~ 339 (538)
.+++|++. ++||-|-.|.|-.+.. .+++.+|+|.+..+ ...++|++..-.. .|||| ..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 45566653 5899999999999985 46899999998753 4556888876665 59999 23
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFS 416 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a 416 (538)
++|||.|+||.|++.++.++...+++.++..|++||+.|+.|||+ ..|.||||||+|+|.. .|..+||+|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccccc
Confidence 489999999999999999987889999999999999999999999 9999999999999996 4567999999999
Q ss_pred cccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+..... |+..+|+||+||++|-|++|.+||........ ..-++..+..+.+ +
T Consensus 212 K~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai-----spgMk~rI~~gqy-~ 285 (400)
T KOG0604|consen 212 KETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----SPGMKRRIRTGQY-E 285 (400)
T ss_pred cccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC-----ChhHHhHhhccCc-c
Confidence 976522 77889999999999999999999986433211 1112222222221 1
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+-++.+ ...++.++++++ ..+..+|.+|.|+.|++.
T Consensus 286 FP~pEW--s~VSe~aKdlIR---~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 286 FPEPEW--SCVSEAAKDLIR---KLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CCChhH--hHHHHHHHHHHH---HHhcCCchhheeHHHhhc
Confidence 111111 112344444454 899999999999999876
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=253.44 Aligned_cols=165 Identities=25% Similarity=0.364 Sum_probs=142.2
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------c----
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------E---- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~---- 338 (538)
..++|...+.||+|++|.||+|... +++.||+|.+.... ...+.+.+|+.++++++|+|+ .
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567888899999999999999964 58899999986432 223567789999999999998 1
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++|+||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEcccccc
Confidence 57999998 56999998763 49999999999999999999999 99999999999999999999999999998
Q ss_pred cccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 417 RLTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 417 ~~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
..... .++.++||||||+++||+++|+.||...
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 166 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred ccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 75421 1467899999999999999999999753
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=245.52 Aligned_cols=218 Identities=19% Similarity=0.315 Sum_probs=161.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-CCEEEEEEccccc--ccHHHHHHHHHHHhcCC-CCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACK--LGEKQFLLEMKQVGLLK-HPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~e 344 (538)
++|...+.||+|++|.||+|...+ ++.||||.++... ....++..|+.++.+.. |+|| ..+++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 467778999999999999999764 8999999997533 23355677887777775 9999 3468999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|++ +++.+++.... ..+++..+.+++.|++.||+|||+ ..+|+||||+|+||++++++.+||+|||++.....
T Consensus 95 ~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 95 LMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred ccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 985 47877776533 268999999999999999999996 14899999999999999999999999998864321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++|||++|+.||...... .+......... ....-.
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~-~~~~~~- 241 (296)
T cd06618 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEE-PPSLPP- 241 (296)
T ss_pred ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCC-CCCCCC-
Confidence 1456899999999999999999999742111 11111111111 000000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+++ +.+++.+|++.||++||++.++++.
T Consensus 242 ---~~~~~~~---l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 242 ---NEGFSPD---FCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ---CCCCCHH---HHHHHHHHccCChhhCCCHHHHhcC
Confidence 0012233 4455559999999999999999865
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=269.76 Aligned_cols=165 Identities=18% Similarity=0.181 Sum_probs=127.9
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC--CCEEEEE------------------EcccccccHHHHHHHHHHHhcCCCCCC
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD--GSMLAIK------------------RLSACKLGEKQFLLEMKQVGLLKHPNL 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~E~~~l~~l~H~ni 337 (538)
..++|...+.||+|+||.||++.... +...+.| .+.........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999987432 2222222 111122223568899999999999999
Q ss_pred c-----------ccEEEeecCCCCHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 E-----------KPLVYKYMSNGTLYSLLHSNG---NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 ~-----------~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
+ .|+|+|++. ++|.+++.... .......+..+|+.|++.||+|||+ .+|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence 3 458899985 57888776432 1223456678899999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCC------------------------CCCCccCcccHHHHHHHHHhCCCCC
Q 040267 404 EDFDARIMDFGFSRLTNG------------------------DASLQKDVHGFGVVLLELVTGQKPF 446 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~------------------------~~~~~~DV~S~Gvvl~elltg~~p~ 446 (538)
.++.+||+|||+++.+.. .++.++|||||||++|||++|..++
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999974321 1677899999999999999987543
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=241.24 Aligned_cols=219 Identities=20% Similarity=0.287 Sum_probs=160.7
Q ss_pred HHHHHHhcCCCCCCeE--eecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 273 VHLIAATSNFSAQNVL--VSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 273 ~~l~~~~~~f~~~~~i--g~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
.+.....++|...+.+ |+|+||.||++.. .++..+|+|.+........ |+.....+ +|||+
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 4455556677776766 9999999999994 5688999999865332211 22222222 69999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFS 416 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a 416 (538)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+ .+++||||||+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 3469999999999999998765 69999999999999999999999 9999999999999999998 9999999988
Q ss_pred cccCC-------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 417 RLTNG-------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 417 ~~~~~-------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
..... .++.++||||||+++|||++|+.||....... .....+.... .... ..
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~--~~~~-~~-- 229 (267)
T PHA03390 158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE---LDLESLLKRQ--QKKL-PF-- 229 (267)
T ss_pred eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch---hhHHHHHHhh--cccC-Cc--
Confidence 64332 26778999999999999999999998432211 1122222211 0000 00
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWS-MYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 515 (538)
....+..+..++. +|++.+|.+||+ ++|+++
T Consensus 230 ----~~~~~~~~~~li~---~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 230 ----IKNVSKNANDFVQ---SMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ----ccccCHHHHHHHH---HHhccChhhCCchHHHHhc
Confidence 0112334444555 999999999996 688874
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=242.33 Aligned_cols=213 Identities=19% Similarity=0.220 Sum_probs=159.0
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc------cccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC------KLGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|...+.||+|+||.||++... .+..+++|.++.. .....++..|+.++++++|||+ ..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 3677789999999999999854 3455555655421 1223457789999999999999 44699
Q ss_pred EeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||+++++|.+++... ....+++.+++.++.|++.||.|||+ .+++|+||||+||++++ +.+||+|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988642 23469999999999999999999999 99999999999999975 569999999886432
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++||||||+++|+|++|..||.... .......... +. .
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~--------~~~~~~~~~~-~~-----~ 222 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN--------FLSVVLRIVE-GP-----T 222 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHc-CC-----C
Confidence 1 14668999999999999999999996421 1111111111 11 1
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+... ...+.+ +.+++.+|++.+|++||++.|+++
T Consensus 223 ~~~~-~~~~~~---~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 223 PSLP-ETYSRQ---LNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CCCc-chhcHH---HHHHHHHHhcCChhhCcCHHHHhh
Confidence 1111 112233 445555999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=238.07 Aligned_cols=229 Identities=19% Similarity=0.261 Sum_probs=175.8
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCC-CCCC----------
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLK-HPNL---------- 337 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-H~ni---------- 337 (538)
+++|+.+-|+ +.||+|+|+.|-.+. +.+|..+|||++.+.. ..+.+..+|++++...+ |+||
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4567777776 789999999999998 7889999999997654 45678999999999996 9999
Q ss_pred -cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---CeEEEec
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DARIMDF 413 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Df 413 (538)
..|||||-|.||+|..+|+++. .+++.++.++.++||.||.|||. ++|.|||+||+|||..... -+||+||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeecc
Confidence 5589999999999999998876 79999999999999999999999 9999999999999986543 4899999
Q ss_pred cCCcccCC--C---------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccc--c
Q 040267 414 GFSRLTNG--D---------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGY--K 456 (538)
Q Consensus 414 g~a~~~~~--~---------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~--~ 456 (538)
.++.-+.. + |..++|.||+|||+|-|++|..||.+....+-. .
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 87652211 0 888999999999999999999999865432211 1
Q ss_pred ccHHHHHH----HHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 457 GNLVNWID----QLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 457 ~~~~~~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+...+-.+ .-+++|.+ ++.|+.+. ..++++++++. ..+..|+.+|-++.+++.
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkY-eFPdkdWa--hIS~eakdlis---nLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKY-EFPDKDWA--HISSEAKDLIS---NLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCccHHHHHHHHHHHhccCC-cCChhhhH--HhhHHHHHHHH---HHHhccHHhhhhhhhccC
Confidence 11111111 11222221 22222211 13456666666 777799999999999887
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=245.35 Aligned_cols=213 Identities=23% Similarity=0.309 Sum_probs=161.9
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
|...+.||+|+||.||+|+. .++..||+|.+.... ...+.+.+|+++++.++|||+ ..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 45557799999999999995 468899999986422 122467889999999999999 35699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
+. |++.+++.... ..+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~ 177 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSF 177 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCc
Confidence 96 58888876543 358999999999999999999999 999999999999999999999999999876321
Q ss_pred -----------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 421 -----------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 421 -----------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
..++.++||||||+++|||++|..||...... ..+...... .. +.....
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~-~~-----~~~~~~ 243 (313)
T cd06633 178 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQN-DS-----PTLQSN 243 (313)
T ss_pred cccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHhc-CC-----CCCCcc
Confidence 12566789999999999999999998753221 111111111 11 111111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+..+.. ++.+|++.+|.+||++.+++..
T Consensus 244 ~~~~~l~~---li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 244 EWTDSFRG---FVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ccCHHHHH---HHHHHccCChhhCcCHHHHhcC
Confidence 12233444 4449999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=251.21 Aligned_cols=223 Identities=22% Similarity=0.241 Sum_probs=163.5
Q ss_pred CCC-CCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc---------------HHHHHHHHHHHhcCCCCCC------
Q 040267 281 NFS-AQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG---------------EKQFLLEMKQVGLLKHPNL------ 337 (538)
Q Consensus 281 ~f~-~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~H~ni------ 337 (538)
+|. ..+.||.|+||+||+|.. .+++.||+|.++..... ...+.+|++++++++|+||
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 444 346799999999999994 46899999998643221 1247789999999999998
Q ss_pred -----cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 338 -----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 338 -----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
..++||||++ |+|.+++.... .+++.....++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECC
Confidence 3469999997 69999987654 58999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccC--------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCccccc
Q 040267 413 FGFSRLTN--------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEG 454 (538)
Q Consensus 413 fg~a~~~~--------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~ 454 (538)
||++.... ..++.++||||||+++|||++|+.||......+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~- 241 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID- 241 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 99886543 014678999999999999999999997543321
Q ss_pred ccccHHHHHHHHhccC---Cccc------------cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 455 YKGNLVNWIDQLSSSG---RIKD------------VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 455 ~~~~~~~~~~~~~~~~---~~~~------------~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+....... .+.. ...+.... ........+.+++.+|++.+|++|||++|++.
T Consensus 242 ----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 ----QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKT-IFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred ----HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHH-hCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111111111000 0000 00000000 00011233455666999999999999999986
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=247.09 Aligned_cols=167 Identities=27% Similarity=0.351 Sum_probs=140.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|+..+.||+|++|.||+|.. .+++.+|+|.+.... .....+.+|++++++++|+||.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46888999999999999999995 468999999985422 1234678899999999999992
Q ss_pred ---ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 ---KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 ---~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++|+||+.. ++.+.+.... ..+++.++..++.|+++||+|||+ .+|+|+||||+||++++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 3689999975 7777776533 369999999999999999999999 9999999999999999999999999998
Q ss_pred CcccCC-----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 416 SRLTNG-----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 416 a~~~~~-----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
++.... .++.++||||||+++|||++|+.||....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~ 231 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS 231 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC
Confidence 863210 15678999999999999999999997543
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=242.06 Aligned_cols=212 Identities=19% Similarity=0.307 Sum_probs=166.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCC-CCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLK-HPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv 342 (538)
++|...+.||+|++|.||+|... +++.||+|.+.... ...+.+.+|++++.+++ |+|| ..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36788899999999999999954 68999999986522 22456889999999998 9999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++++|.+++...+ .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999998765 69999999999999999999999 9999999999999999999999999998774321
Q ss_pred ------------------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH
Q 040267 422 ------------------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL 459 (538)
Q Consensus 422 ------------------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 459 (538)
..+.++||||||++++|+++|+.||......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------- 228 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY------- 228 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-------
Confidence 1466899999999999999999999853210
Q ss_pred HHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH----HHHHH
Q 040267 460 VNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSM----YQVYI 515 (538)
Q Consensus 460 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~----~evl~ 515 (538)
.-...... .. ..+. ...+..+. +++.+|++.+|++|||+ +++++
T Consensus 229 -~~~~~~~~-~~------~~~~-~~~~~~~~---~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 -LTFQKILK-LE------YSFP-PNFPPDAK---DLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -HHHHHHHh-cC------CCCC-CccCHHHH---HHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00111110 00 0000 11233444 45559999999999999 66654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=249.89 Aligned_cols=163 Identities=23% Similarity=0.284 Sum_probs=136.5
Q ss_pred CCCCCCeEeecCCceEEEEEeC-C--CCEEEEEEccccc---ccHHHHHHHHHHHhcC-CCCCCc---------------
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-D--GSMLAIKRLSACK---LGEKQFLLEMKQVGLL-KHPNLE--------------- 338 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l-~H~ni~--------------- 338 (538)
+|...+.||+|+||.||++... + +..||+|.+.... ...+.+.+|++++.++ .||||.
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4667789999999999999953 4 7799999986422 2245688899999999 599982
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++++||+. ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 246778875 69999987654 58999999999999999999999 9999999999999999999999999998863
Q ss_pred cCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 419 TNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 419 ~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
... .++.++||||||+++|++++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 210 1567899999999999999999999753
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=268.02 Aligned_cols=225 Identities=21% Similarity=0.348 Sum_probs=176.1
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC--------CCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC---------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL--------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni--------- 337 (538)
..++....+.+|+|.||.|++|.... ...||||.++... ...+.+..|+++|..+ +|+|+
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 33444555699999999999998421 3479999998643 3356799999999999 59999
Q ss_pred --cccEEEeecCCCCHHHHhhcCC------C--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCee
Q 040267 338 --EKPLVYKYMSNGTLYSLLHSNG------N--------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401 (538)
Q Consensus 338 --~~~lv~e~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 401 (538)
..++|.||++.|+|.++++..+ . ..++....+.++.|||.|++||++ .++|||||-.+|||
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVL 450 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEE
Confidence 3569999999999999998765 0 138889999999999999999999 99999999999999
Q ss_pred eCCCCCeEEEeccCCcccCC--------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccc
Q 040267 402 VDEDFDARIMDFGFSRLTNG--------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEG 454 (538)
Q Consensus 402 l~~~~~~kl~Dfg~a~~~~~--------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~ 454 (538)
+.++..+||+|||+|+.... .++.|+|||||||+||||+| |..||.+...
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--- 527 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--- 527 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc---
Confidence 99999999999999984221 18899999999999999999 9999975211
Q ss_pred ccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 455 YKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
...+.+ .+.+|... +.+..+..++.+++..||+.+|++||++.|+.+.++....
T Consensus 528 -~~~l~~----~l~~G~r~---------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 528 -TEELLE----FLKEGNRM---------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred -HHHHHH----HHhcCCCC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 112222 23333211 1122233445566779999999999999999999998543
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=247.85 Aligned_cols=235 Identities=21% Similarity=0.289 Sum_probs=170.5
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------------ccc
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------------EKP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------------~~~ 340 (538)
+|...+.||.|++|.||+|+.. ++..||+|.+.... ...+.+.+|+.+++.++|+|+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4777889999999999999954 58999999987532 334678999999999999998 237
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
++|||++ ++|.+++.... .+++..+..++.+++.||+|||+ .+|+|+||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999998 48999987655 69999999999999999999999 999999999999999999999999999887432
Q ss_pred C---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH----H---
Q 040267 421 G---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ----L--- 466 (538)
Q Consensus 421 ~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~----~--- 466 (538)
. .++.++||||||+++|+|++|+.||......+... .+...... .
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLN-LIVEVLGTPSEEDLKF 233 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHH-HHHHhcCCCChhHhhh
Confidence 1 25668999999999999999999997654321100 00000000 0
Q ss_pred hccCCccccccccc-cCC-----CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHhHH
Q 040267 467 SSSGRIKDVIDKAL-TGK-----GYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSIAE 522 (538)
Q Consensus 467 ~~~~~~~~~~d~~l-~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i~~ 522 (538)
.......+.+...- ... ..+.....+.+++.+||+.+|++|||+.++++. ++++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 00000000000000 000 000112334555669999999999999999974 555443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-28 Score=232.74 Aligned_cols=201 Identities=20% Similarity=0.274 Sum_probs=158.2
Q ss_pred EeecCCceEEEEEeC-CCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 288 LVSTWTGTTYKAMLL-DGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 288 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
||+|++|.||++... +++.+|+|.++.... ....+.+|++++++++|+|+ ..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999964 589999999875332 34578899999999999999 45799999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.... .+++.....++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG 155 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcC
Confidence 99998765 58999999999999999999999 9999999999999999999999999998864322
Q ss_pred -------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 488 (538)
..+.++|+||||+++||+++|+.||..... ......... .. ..+ ....++.
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~-~~------~~~-~~~~~~~ 219 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILK-DP------LRF-PEFLSPE 219 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhc-CC------CCC-CCCCCHH
Confidence 146789999999999999999999974321 111111111 10 001 1112334
Q ss_pred HHHHHHHHhHccCCCCCCCCCHHH
Q 040267 489 ILQFLQIACKCVAVRPKEKWSMYQ 512 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs~~e 512 (538)
+.+++ .+|+..||++||++.+
T Consensus 220 l~~~i---~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 220 ARDLI---SGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHH---HHHhcCCHhhCCCccc
Confidence 44444 4999999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=253.06 Aligned_cols=213 Identities=19% Similarity=0.326 Sum_probs=168.2
Q ss_pred CCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccc-cccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSAC-KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
|.+...||.|+||.||+|..++ +-..|-|.+... ....++|.-||++|....||+| ..+++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4455679999999999999654 556677887643 3445779999999999999999 33589999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|-+...+-.-+ ..+++.++.-++.|++.||.|||+ ..|||||||..|||++-+|.++|+|||.+.....
T Consensus 114 GAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 114 GAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred chHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence 99998887655 379999999999999999999999 9999999999999999999999999999863211
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.|..++||||||++|.||..+.+|....+. ...+.+...+ . .|.+
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--------MRVllKiaKS-e-----PPTL 255 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKS-E-----PPTL 255 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--------HHHHHHHhhc-C-----CCcc
Confidence 188999999999999999999999875322 1111111111 1 1222
Q ss_pred -cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 -TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 -~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+..++..+.++++ +|+..||..||++.++++
T Consensus 256 lqPS~Ws~~F~DfLk---~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 256 LQPSHWSRSFSDFLK---RCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cCcchhhhHHHHHHH---HHHhcCCccCCCHHHHhh
Confidence 23345566666777 999999999999999986
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-29 Score=230.83 Aligned_cols=168 Identities=24% Similarity=0.299 Sum_probs=142.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC-----CCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD-----GSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL------------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni------------~ 338 (538)
...|+....||+|.||.||+|+-.+ ...+|+|+++..+ .-.....+|+.+++.++|||+ .
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 3457888999999999999997322 2379999997543 223567899999999999999 2
Q ss_pred ccEEEeecCCCCHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC----CCeEEE
Q 040267 339 KPLVYKYMSNGTLYSLLHSNG---NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED----FDARIM 411 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~ 411 (538)
.++++||.+. +|.+.++-+. .+.++......|+.||+.|+.|||+ +=|+||||||.|||+..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEee
Confidence 3699999987 9999987543 3578889999999999999999999 889999999999999877 999999
Q ss_pred eccCCcccCCC---------------------------CCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 412 DFGFSRLTNGD---------------------------ASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 412 Dfg~a~~~~~~---------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
|+|+++++... ||.+.||||.||++.||+|-++-|.+..
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence 99999976542 8999999999999999999988887543
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-28 Score=258.88 Aligned_cols=229 Identities=17% Similarity=0.146 Sum_probs=147.1
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-C----CCEEEEEEcccccccHHHHHHH-HH---------HHhcCCC-----CCC
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-D----GSMLAIKRLSACKLGEKQFLLE-MK---------QVGLLKH-----PNL 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~E-~~---------~l~~l~H-----~ni 337 (538)
..++|...+.||+|+||.||+|+.. + +..||+|++...... +....| +. .+..+.+ ..-
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-EIWMNERVRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-HHHHHHHHHhhchhhHHHHHHhhhcccccccCC
Confidence 5678999999999999999999964 4 689999998643221 111111 10 0111111 112
Q ss_pred cccEEEeecCCCCHHHHhhcCCC------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGN------------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 399 (538)
..++||||+++++|.+++..... .......+..++.|++.||+|||+ .+|+||||||+|
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~N 285 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQN 285 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHH
Confidence 56899999999999999875431 011223456799999999999999 999999999999
Q ss_pred eeeCC-CCCeEEEeccCCcccCCC----------------------------------------------CCCccCcccH
Q 040267 400 ILVDE-DFDARIMDFGFSRLTNGD----------------------------------------------ASLQKDVHGF 432 (538)
Q Consensus 400 Ill~~-~~~~kl~Dfg~a~~~~~~----------------------------------------------~~~~~DV~S~ 432 (538)
||+++ ++.+||+|||+|+..... ++.++|||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 99986 589999999999743210 1235699999
Q ss_pred HHHHHHHHhCCCCCCCCccc-----ccccccHHHHHHHHhccCCccccccccccC--CCcHHHHHHHHHHHhHccCCCCC
Q 040267 433 GVVLLELVTGQKPFEINASE-----EGYKGNLVNWIDQLSSSGRIKDVIDKALTG--KGYDDEILQFLQIACKCVAVRPK 505 (538)
Q Consensus 433 Gvvl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~l~~~cl~~dP~ 505 (538)
||++|||+++..|++..... .........|....... ..+.+.. +..........+++.+|++.||+
T Consensus 366 GviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 366 GLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred HHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 99999999987765431100 00011223332211110 0000000 00000111223455599999999
Q ss_pred CCCCHHHHHHH
Q 040267 506 EKWSMYQVYIS 516 (538)
Q Consensus 506 ~RPs~~evl~~ 516 (538)
+|||+.|+++.
T Consensus 440 kR~ta~e~L~H 450 (566)
T PLN03225 440 QRISAKAALAH 450 (566)
T ss_pred cCCCHHHHhCC
Confidence 99999999874
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=213.04 Aligned_cols=163 Identities=23% Similarity=0.305 Sum_probs=139.7
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCccc-----------EEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLEKP-----------LVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~~~-----------lv~e~ 345 (538)
+|...++||+|.||+||+|+ .++++.||+|+++.+. .-.....+|+.+++.++|+||++. +|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45566789999999999999 5678999999997533 224568899999999999999543 89999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
|.. +|..+...-.+ .++......++.|+++||.|+|+ ..+.|||+||.|.|++.+|+.|++|||+++.++-.
T Consensus 83 cdq-dlkkyfdslng-~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred hhH-HHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 976 88888876543 68999999999999999999999 99999999999999999999999999999865432
Q ss_pred ---------------------CCCccCcccHHHHHHHHHh-CCCCCCC
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVT-GQKPFEI 448 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~ 448 (538)
|+...|+||-||++.|+.. |++-|.+
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 7889999999999999987 6666654
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=251.59 Aligned_cols=209 Identities=19% Similarity=0.216 Sum_probs=167.7
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~ 345 (538)
++.|.....+|.|+|++|-++. ..+++..++|++.+. ..+-.+|+.++... +|||| ..|+|||+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 6677788889999999999998 556889999999764 22344677676666 69999 55799999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee-CCCCCeEEEeccCCcccCCC--
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV-DEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
+.+|-+.+.+.... ... .++..|+.+|+.|+.|||+ .+|||||+||+|||+ ++.++++|+|||.++.....
T Consensus 398 l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 398 LDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred ccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99998888877654 233 7788899999999999999 999999999999999 58899999999999866532
Q ss_pred ------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 423 ------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 423 ------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
+++++|+||||++||+|++|+.||...... .-+...+..+... +.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--------~ei~~~i~~~~~s---------~~ 534 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--------IEIHTRIQMPKFS---------EC 534 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--------HHHHHhhcCCccc---------cc
Confidence 899999999999999999999999864432 1112222222221 34
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+++++++++ +|++.||.+||+|.++...
T Consensus 535 vS~~AKdLl~---~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 535 VSDEAKDLLQ---QLLQVDPALRLGADEIGAH 563 (612)
T ss_pred cCHHHHHHHH---HhccCChhhCcChhhhccC
Confidence 5678888888 9999999999999998764
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=233.02 Aligned_cols=191 Identities=17% Similarity=0.163 Sum_probs=145.8
Q ss_pred cCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHHHHhhcC
Q 040267 291 TWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSN 358 (538)
Q Consensus 291 G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~~~l~~~ 358 (538)
|.+|.||++.. .+++.||+|.++... .+.+|...+....|||+ ..++||||+++|+|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 78999999994 568999999997643 23345555556679998 346999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----------------
Q 040267 359 GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----------------- 421 (538)
Q Consensus 359 ~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----------------- 421 (538)
. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++|||.+.....
T Consensus 80 ~--~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~ 154 (237)
T cd05576 80 L--NIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVG 154 (237)
T ss_pred c--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCccc
Confidence 4 58999999999999999999999 9999999999999999999999999997643221
Q ss_pred ---CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhH
Q 040267 422 ---DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACK 498 (538)
Q Consensus 422 ---~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~ 498 (538)
.++.++||||+|+++|||++|+.|+....... .......+. ...+..+..+++ +
T Consensus 155 ~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------------~~~~~~~~~-~~~~~~~~~li~---~ 211 (237)
T cd05576 155 GISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------------NTHTTLNIP-EWVSEEARSLLQ---Q 211 (237)
T ss_pred CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------------ccccccCCc-ccCCHHHHHHHH---H
Confidence 25678999999999999999998876321100 000000011 112334444555 9
Q ss_pred ccCCCCCCCCCHHHH
Q 040267 499 CVAVRPKEKWSMYQV 513 (538)
Q Consensus 499 cl~~dP~~RPs~~ev 513 (538)
|++.||++||++.+.
T Consensus 212 ~l~~dp~~R~~~~~~ 226 (237)
T cd05576 212 LLQFNPTERLGAGVA 226 (237)
T ss_pred HccCCHHHhcCCCcc
Confidence 999999999997433
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=225.19 Aligned_cols=211 Identities=19% Similarity=0.316 Sum_probs=154.6
Q ss_pred CeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCC-CCCCccc-----------EEEeecCCCC
Q 040267 286 NVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLK-HPNLEKP-----------LVYKYMSNGT 350 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-H~ni~~~-----------lv~e~~~~gs 350 (538)
..||.|..|.|++++. .+|..+|||.+.+.. ...+++...+.++.+-+ .|.|+++ +.||.|.- -
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C 176 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-C 176 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-H
Confidence 4599999999999995 458999999997643 44567778888776664 7888554 34455522 3
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--------
Q 040267 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-------- 422 (538)
Q Consensus 351 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-------- 422 (538)
++.+++... .++++...-++...+..||.||.+ ..+|+|||+||+|||+|+.|++|++|||++..+.+.
T Consensus 177 ~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAG 253 (391)
T KOG0983|consen 177 AEKLLKRIK-GPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAG 253 (391)
T ss_pred HHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccccccC
Confidence 444444333 368888888999999999999998 467999999999999999999999999998754321
Q ss_pred -----------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC-
Q 040267 423 -----------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG- 484 (538)
Q Consensus 423 -----------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~- 484 (538)
|..++||||||++++||.||+.||.....+- +-+.....++ .|.+.+..
T Consensus 254 C~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF-------e~ltkvln~e------PP~L~~~~g 320 (391)
T KOG0983|consen 254 CAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF-------EVLTKVLNEE------PPLLPGHMG 320 (391)
T ss_pred CccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH-------HHHHHHHhcC------CCCCCcccC
Confidence 7778999999999999999999998644321 1111111111 13333221
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+....++++ .|+..|+.+||...++++.
T Consensus 321 FSp~F~~fv~---~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 321 FSPDFQSFVK---DCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred cCHHHHHHHH---HHhhcCcccCcchHHHhcC
Confidence 3344555555 9999999999999988763
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=232.69 Aligned_cols=233 Identities=22% Similarity=0.272 Sum_probs=181.9
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL----- 337 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni----- 337 (538)
...++.....++....++.+|.||.||+|.+.+ .+.|-+|.++.... ....+..|.-.+..+.|||+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 345666667778888899999999999996533 45677888865332 23458889999999999999
Q ss_pred -------cccEEEeecCCCCHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC
Q 040267 338 -------EKPLVYKYMSNGTLYSLLHSN------GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE 404 (538)
Q Consensus 338 -------~~~lv~e~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 404 (538)
..+++|.++.-|+|..++... ..+.++-.+...++.|++.|++|||. .+|||.||-.+|.+||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehh
Confidence 346889999999999999821 23567778889999999999999999 99999999999999999
Q ss_pred CCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCccccccccc
Q 040267 405 DFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGN 458 (538)
Q Consensus 405 ~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 458 (538)
..++||+|-.+++-+-+. ++.++|||||||+||||+| |+.||.+-++.+
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE----- 506 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE----- 506 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-----
Confidence 999999999988843221 8999999999999999999 999998644332
Q ss_pred HHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 459 LVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
+..++..|. ++. .+-.++.++..++.-||...|++||++++++.-|.+...+.
T Consensus 507 ----m~~ylkdGy-------Rla--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 507 ----MEHYLKDGY-------RLA--QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred ----HHHHHhccc-------eec--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 222333321 111 11223445666777999999999999999999999876554
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-29 Score=229.55 Aligned_cols=216 Identities=20% Similarity=0.267 Sum_probs=160.6
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCCc-----------ccEEEeecCCC
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNLE-----------KPLVYKYMSNG 349 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~e~~~~g 349 (538)
...||.|+||+|+|-.+ +.|+.+|||+++... .+.++++.|.+...+- ..|||+ .++.||.|.-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 35699999999999985 469999999998643 4567788898876655 689983 4599999964
Q ss_pred CHHHHhh---cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 350 TLYSLLH---SNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 350 sL~~~l~---~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
||..+.+ .-....+++...-.|..-...||.||.+ ...|||||+||+|||+|..|.+||+|||++..+.+
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT 225 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT 225 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh
Confidence 7665543 2233468888888999999999999998 47899999999999999999999999999864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++..++||||+|++|||+.||+.||....+ +.+.+..... +....+ ......
T Consensus 226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-------vfeql~~Vv~-gdpp~l-~~~~~~ 296 (361)
T KOG1006|consen 226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-------VFEQLCQVVI-GDPPIL-LFDKEC 296 (361)
T ss_pred hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-------HHHHHHHHHc-CCCCee-cCcccc
Confidence 177899999999999999999999985322 2223322222 221111 111111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
-..+..+..++. .|+..|-++||+..++.+
T Consensus 297 ~~~s~~~~~fin---tCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 297 VHYSFSMVRFIN---TCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cccCHHHHHHHH---HHhhcccccCcchhhhhc
Confidence 123345556666 999999999999998865
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-29 Score=226.50 Aligned_cols=225 Identities=21% Similarity=0.282 Sum_probs=166.7
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccc---ccccHHHHHHHHHHHhcCCCCCC-------------------c
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSA---CKLGEKQFLLEMKQVGLLKHPNL-------------------E 338 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~H~ni-------------------~ 338 (538)
|....+||+|.||.||+|+. ++|+.||+|+.-- ...-.....+|+++|..++|+|+ .
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 44557899999999999995 4588899987632 12234567899999999999998 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+|+++|+. +|.-++.... ..++..++.+++.++..||.|+|. ..|+|||+||+|+||+.++.+||+|||+++.
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 5799999987 8988887653 368999999999999999999999 9999999999999999999999999999974
Q ss_pred cCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC
Q 040267 419 TNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG 470 (538)
Q Consensus 419 ~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (538)
+.. .++++.|||.-||++.||.||.+-+.+....... .++..+-.-+..+
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql--~~Is~LcGs~tke 251 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQL--HLISQLCGSITKE 251 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHH--HHHHHHhccCCcc
Confidence 432 1889999999999999999999888765432211 0111000000000
Q ss_pred Ccc---------------------ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 471 RIK---------------------DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 471 ~~~---------------------~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+. ..+...+++-..++++.++++ ..+..||.+|+++++++..
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle---~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLE---KLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHH---HHhccCcccCcchHhhhch
Confidence 010 111112221122345556666 9999999999999998763
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=249.59 Aligned_cols=227 Identities=20% Similarity=0.286 Sum_probs=184.5
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
+.++.+...++-|.+.++||.|.+|.||+++ .++++.+|+|++......++++..|.++++.. .|||+
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 3455566677889999999999999999999 66799999999988777788899999999998 59998
Q ss_pred ------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
..+||||||.+||..|+++.-.+..+.|..+..|++.++.|+.+||. ..++|||||-.|||+++++.+|+.
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEe
Confidence 44699999999999999987666789999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCCC----------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 412 DFGFSRLTNGD----------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 412 Dfg~a~~~~~~----------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
|||.+..++.. |+..+|+||+|++..||.-|.+|+.+.-. +
T Consensus 166 DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-----------m 234 (953)
T KOG0587|consen 166 DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-----------M 234 (953)
T ss_pred eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-----------h
Confidence 99998855422 77889999999999999999999875322 1
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+... ..--.+.+. .+.....++.+.+..|+..|-.+||++.++++
T Consensus 235 raLF~I---pRNPPPkLk--rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 235 RALFLI---PRNPPPKLK--RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hhhccC---CCCCCcccc--chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 111111 111112222 23334445555555999999999999998875
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=228.32 Aligned_cols=207 Identities=23% Similarity=0.293 Sum_probs=164.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
..++|...++||+|.||.|..++ ..+++.+|+|++++.. .....-..|-++|...+||.+ ..+.
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 34578888999999999999999 5579999999998643 223446779999999999988 4579
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN- 420 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~- 420 (538)
||||+.||.|+-+|.... .+++.....+...|..||.|||+ .+||.||+|.+|.++|.+|.+||+|||+++.--
T Consensus 246 VMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 999999999998887654 69999999999999999999999 999999999999999999999999999998321
Q ss_pred ----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 421 ----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 421 ----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.+|..++|.|.+||++|||++|+.||.....+. +.+.+ .-+++
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k-----LFeLI----l~ed~------ 385 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK-----LFELI----LMEDL------ 385 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH-----HHHHH----Hhhhc------
Confidence 128899999999999999999999998643321 11111 00110
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKW 508 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP 508 (538)
.. +...+.+++.++. ..+..||.+|.
T Consensus 386 kF-Pr~ls~eAktLLs---GLL~kdP~kRL 411 (516)
T KOG0690|consen 386 KF-PRTLSPEAKTLLS---GLLKKDPKKRL 411 (516)
T ss_pred cC-CccCCHHHHHHHH---HHhhcChHhhc
Confidence 11 1123456677776 88889999995
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=242.89 Aligned_cols=226 Identities=19% Similarity=0.201 Sum_probs=157.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-----------------CCCCEEEEEEcccccc-cHH--------------HHHHH
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-----------------LDGSMLAIKRLSACKL-GEK--------------QFLLE 325 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-----------------~~~~~vavK~~~~~~~-~~~--------------~~~~E 325 (538)
..++|...++||+|+||+||+|.. .+++.||||++..... ..+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 2356899999864321 112 23447
Q ss_pred HHHHhcCCCCCC------------------------cccEEEeecCCCCHHHHhhcCC----------------------
Q 040267 326 MKQVGLLKHPNL------------------------EKPLVYKYMSNGTLYSLLHSNG---------------------- 359 (538)
Q Consensus 326 ~~~l~~l~H~ni------------------------~~~lv~e~~~~gsL~~~l~~~~---------------------- 359 (538)
+.++.+++|.++ ..++||||+++|+|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788877654 2479999999999999987421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-----------------
Q 040267 360 NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD----------------- 422 (538)
Q Consensus 360 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----------------- 422 (538)
...++|..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1235678899999999999999999 89999999999999999999999999998643110
Q ss_pred -----------------------------CCCccCcccHHHHHHHHHhCCC-CCCCCccc----ccccccHHHHHHHHhc
Q 040267 423 -----------------------------ASLQKDVHGFGVVLLELVTGQK-PFEINASE----EGYKGNLVNWIDQLSS 468 (538)
Q Consensus 423 -----------------------------~~~~~DV~S~Gvvl~elltg~~-p~~~~~~~----~~~~~~~~~~~~~~~~ 468 (538)
...+.||||+||++|||++|.. |+...... .....++..|... .
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~--~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY--K 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--c
Confidence 0124699999999999999875 66532110 1111223333221 1
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCC---CCCCCHHHHHHH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRP---KEKWSMYQVYIS 516 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~evl~~ 516 (538)
.... +-.. .+..++...+++. +++..+| .+|+|+.|+++.
T Consensus 458 ~~~~----~~~~-~d~~s~~~~dLi~---~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 458 GQKY----DFSL-LDRNKEAGWDLAC---KLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccCC----Cccc-ccccChHHHHHHH---HHhccCCCCcccCCCHHHHhCC
Confidence 1111 1111 1112345555555 8887655 789999999863
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=256.62 Aligned_cols=224 Identities=18% Similarity=0.198 Sum_probs=172.7
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC--------
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-------- 337 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-------- 337 (538)
...++....++|.+.++||+|+||.|..+++. +++.||+|++.+. +....-|..|-.+|..-..+=|
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 34567777889999999999999999999964 5889999999762 2334568888888776554333
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..|+|||||+||+|-.++.+.+ .+++..+..++..|.-||.-||+ .|+|||||||.|||||..|++||+|||
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccch
Confidence 6789999999999999998877 69999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCCC-----------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 415 FSRLTNGD-----------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 415 ~a~~~~~~-----------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
.+-.+..+ |+..+|.||+||++|||+.|..||+.+. +++-..+
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads--------lveTY~K 292 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS--------LVETYGK 292 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH--------HHHHHHH
Confidence 88654421 8889999999999999999999998533 3333333
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCC---HHHHHH
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWS---MYQVYI 515 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~evl~ 515 (538)
.........+.+ ....+++++.+++ +.+. +|+.|-. ++++-.
T Consensus 293 Im~hk~~l~FP~----~~~VSeeakdLI~---~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 293 IMNHKESLSFPD----ETDVSEEAKDLIE---ALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred HhchhhhcCCCc----ccccCHHHHHHHH---HHhc-ChhhhcccccHHHHHh
Confidence 333222111111 1114567777776 4333 5777777 666644
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=234.76 Aligned_cols=216 Identities=20% Similarity=0.272 Sum_probs=171.4
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
..+.|..-++||+|+||.||-+.. .+|+.+|.|.+.+.+ ....-..+|-.+|.+++.+.| ..++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 345578889999999999999984 569999999986432 334457789999999999988 4469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|+..|.||+|.-+|...+...+++..+..++.+|+-||++||+ .+||.||+||+|||||++|+++|+|+|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 9999999999999998877789999999999999999999999 9999999999999999999999999999986543
Q ss_pred C----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 D----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. |+...|.||+||++|||+.|+.||...... .-.+-+.+..... +.
T Consensus 340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK-----vk~eEvdrr~~~~-------~~ 407 (591)
T KOG0986|consen 340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK-----VKREEVDRRTLED-------PE 407 (591)
T ss_pred CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-----hhHHHHHHHHhcc-------hh
Confidence 2 888999999999999999999999742211 0000122211111 10
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMY 511 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 511 (538)
--.+..+++++++++ ..++.||++|--.+
T Consensus 408 ey~~kFS~eakslc~---~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 408 EYSDKFSEEAKSLCE---GLLTKDPEKRLGCR 436 (591)
T ss_pred hcccccCHHHHHHHH---HHHccCHHHhccCC
Confidence 011234567777877 88899999997554
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=253.78 Aligned_cols=133 Identities=23% Similarity=0.331 Sum_probs=117.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||+++... .....+..|+.++..++|+|| ..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56888899999999999999964 68999999997532 123568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
||+++++|.+++...+ .+++..+++|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997655 58899999999999999999999 899999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=220.96 Aligned_cols=204 Identities=25% Similarity=0.336 Sum_probs=159.1
Q ss_pred CCceEEEEEeC-CCCEEEEEEcccccc-c-HHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHHHHhhc
Q 040267 292 WTGTTYKAMLL-DGSMLAIKRLSACKL-G-EKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHS 357 (538)
Q Consensus 292 ~~g~vy~~~~~-~~~~vavK~~~~~~~-~-~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~~~l~~ 357 (538)
+||.||+|... +++.+|+|.+..... . .+.+.+|++.+++++|+|+ ..++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999965 489999999975432 2 5789999999999999999 34689999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------------
Q 040267 358 NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------------- 421 (538)
Q Consensus 358 ~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------------- 421 (538)
.. .+++..+..++.+++++++|||+ .+++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~p 155 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAP 155 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCH
Confidence 55 38999999999999999999999 8999999999999999999999999999875433
Q ss_pred ------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHH
Q 040267 422 ------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQI 495 (538)
Q Consensus 422 ------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l 495 (538)
..+.++||||||++++++++|..||...... ..+..+.. ...... ..........+.++
T Consensus 156 E~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~~ 220 (244)
T smart00220 156 EVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKKIG----KPKPPF-------PPPEWKISPEAKDL 220 (244)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHh----ccCCCC-------ccccccCCHHHHHH
Confidence 1567899999999999999999999752110 11111111 111000 00000022345556
Q ss_pred HhHccCCCCCCCCCHHHHHH
Q 040267 496 ACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 496 ~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+|+..+|++||++.++++
T Consensus 221 i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 221 IRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHccCCchhccCHHHHhh
Confidence 66999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=231.11 Aligned_cols=217 Identities=23% Similarity=0.327 Sum_probs=167.2
Q ss_pred CCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccccc--------HHHHHHHHHHHhcCCCCCCc------------cc
Q 040267 282 FSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLG--------EKQFLLEMKQVGLLKHPNLE------------KP 340 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~E~~~l~~l~H~ni~------------~~ 340 (538)
|-..++||+|+|+.||+|. +...+-||||+-...+.. .+...+|.++.+.+.||.|+ .|
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 3345779999999999999 666788999986433211 13467899999999999993 35
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCc
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSR 417 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~ 417 (538)
-|+|||+|.+|.-||+.+. .+++.++..|+.||+.||.||.+ ..++|||-||||.|||+.+ .|.+||+|||+++
T Consensus 545 TVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred eeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 7999999999999998876 68999999999999999999997 4578999999999999954 4889999999999
Q ss_pred ccCCC----------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 418 LTNGD----------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 418 ~~~~~----------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
++.++ ++.|+||||.||++|..+.|+.||....... ++
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ----dI---- 693 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ----DI---- 693 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH----HH----
Confidence 77643 6789999999999999999999998643321 11
Q ss_pred HHHhccCCcccccccccc-CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALT-GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+....+...-.-.+. ....+.++..+++ +|+++.-++|....++..
T Consensus 694 ---LqeNTIlkAtEVqFP~KPvVsseAkaFIR---RCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 694 ---LQENTILKATEVQFPPKPVVSSEAKAFIR---RCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ---HhhhchhcceeccCCCCCccCHHHHHHHH---HHHHhhhhhhhhHHHHcc
Confidence 111111111111111 1234567888888 999999999987766653
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=228.25 Aligned_cols=233 Identities=18% Similarity=0.273 Sum_probs=174.7
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcCC--CCCC---------------ccc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK--HPNL---------------EKP 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--H~ni---------------~~~ 340 (538)
++.|.+...+|+|.||.|-++. ...+..||||+++.-..-.+..+-|++++.++. -|+- ..+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 6678888999999999999998 445789999999876655677788999999994 2332 446
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----------------
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---------------- 404 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---------------- 404 (538)
+|+|.+ |-|+.+++..++-.+++...+..++.|++++++|||+ .+++|-||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCcccee
Confidence 899998 4499999999887789999999999999999999999 99999999999999831
Q ss_pred ----CCCeEEEeccCCcccCCC--------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccc--c--
Q 040267 405 ----DFDARIMDFGFSRLTNGD--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGY--K-- 456 (538)
Q Consensus 405 ----~~~~kl~Dfg~a~~~~~~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~--~-- 456 (538)
+..+||+|||.|...... .+.++||||+||||.|+.||..-|+.....+.. .
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMer 323 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMER 323 (415)
T ss_pred ccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHH
Confidence 245899999999865432 789999999999999999999998865533210 0
Q ss_pred --c----cHHHH--HHHHhccCCc-----------ccccccccc----CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 040267 457 --G----NLVNW--IDQLSSSGRI-----------KDVIDKALT----GKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513 (538)
Q Consensus 457 --~----~~~~~--~~~~~~~~~~-----------~~~~d~~l~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 513 (538)
+ .+..- ..+....+++ ..+.++... -...+.+..++++|+..++..||.+|+|+.|+
T Consensus 324 IlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA 403 (415)
T KOG0671|consen 324 ILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA 403 (415)
T ss_pred hhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence 0 00000 1111111111 111111110 01234566778888889999999999999999
Q ss_pred HH
Q 040267 514 YI 515 (538)
Q Consensus 514 l~ 515 (538)
++
T Consensus 404 L~ 405 (415)
T KOG0671|consen 404 LS 405 (415)
T ss_pred hc
Confidence 85
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-27 Score=210.13 Aligned_cols=224 Identities=15% Similarity=0.267 Sum_probs=168.0
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCCc-------------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNLE-------------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni~-------------~~lv~ 343 (538)
.++|+..+++|+|.++.||.|. ..+.+.++||.++..+ .+.+.+|+++|..++ ||||+ ..||+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 3467777889999999999998 6678899999998643 467999999999997 99993 34899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcccCCC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~ 422 (538)
||+.+.+...+.. .++-..+..++.+++.||.|+|+ .||+|||+||.|+++|. .-..+|+|+|+|.+..+.
T Consensus 115 E~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 115 EYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred hhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 9999987776654 47777889999999999999999 99999999999999995 467999999999877653
Q ss_pred -----------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccccc---------ccHHHHHHHHhc--
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK---------GNLVNWIDQLSS-- 468 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~---------~~~~~~~~~~~~-- 468 (538)
+...-|+|||||++..|+..+.||....+..+.- ..+..++.+..-
T Consensus 187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 6778899999999999999999997543321110 012222222111
Q ss_pred cCCccccccccccC-----------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 SGRIKDVIDKALTG-----------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 ~~~~~~~~d~~l~~-----------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++.+++....+. .....++.++++ ..+..|-.+|||+.|.+.
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlld---klLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLD---KLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHH---HHHhhccccccchHHHhc
Confidence 11111111111000 112346666666 999999999999999875
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=213.10 Aligned_cols=225 Identities=14% Similarity=0.269 Sum_probs=170.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC------------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL------------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni------------~~~lv~e~ 345 (538)
+.|.+.+.+|+|.||.+-.+.++. .+.+++|.+.......++|.+|...--.+ .|.|| ..+.++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 357778899999999999999654 67899999988777788999999876666 48888 33589999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC--CCCCeEEEeccCCcccCCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD--EDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~a~~~~~~- 422 (538)
+|.|+|.+-+...+ +.+....+++.|++.|+.|+|+ +.+||||||.+|||+- +..++||+|||..+..+..
T Consensus 104 aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 104 APRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred CccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 99999999988765 8888899999999999999999 9999999999999983 3468999999999865532
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
..+.+|||.||++++.++||+.||...... .....+|..- ..+....+.+
T Consensus 178 ~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~---d~~Y~~~~~w--~~rk~~~~P~- 251 (378)
T KOG1345|consen 178 KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM---DKPYWEWEQW--LKRKNPALPK- 251 (378)
T ss_pred hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc---CchHHHHHHH--hcccCccCch-
Confidence 567899999999999999999999843322 2223334321 1111111111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.. . ..++.+.++.+ +-+.++|.+|-...++.++.....
T Consensus 252 ~F-~-~fs~~a~r~Fk---k~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 252 KF-N-PFSEKALRLFK---KSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred hh-c-ccCHHHHHHHH---HhcCCcccccchhHHHHHHHHHHH
Confidence 01 1 12234444555 889999999977777777665543
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-27 Score=231.62 Aligned_cols=210 Identities=18% Similarity=0.285 Sum_probs=160.9
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCC
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNG 349 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~g 349 (538)
.++||.|.||+||-|++ ++|+.||||.+.+.+ ..+.++++|+.+|..++||.| ..++|||-+. |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 47899999999999995 579999999997633 345779999999999999999 3358999995 5
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCcccCCC----
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~---- 422 (538)
+..+.+-.....++++.....+..||+.||.|||. ++|+|+||||+|||+... -.+||+|||+|+++++.
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRr 724 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRR 724 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhhhh
Confidence 77777766555579999999999999999999999 999999999999999744 57999999999988753
Q ss_pred ------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 423 ------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 423 ------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
|...-|+||.||++|--++|..||..+. ++.+.++ .. .++- ..+.
T Consensus 725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE-------dIndQIQ----NA---aFMy---Pp~P 787 (888)
T KOG4236|consen 725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE-------DINDQIQ----NA---AFMY---PPNP 787 (888)
T ss_pred hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc-------chhHHhh----cc---cccc---CCCc
Confidence 7788899999999999999999997532 2222221 11 1111 1122
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+.....++++...++..-.+|-|....+.
T Consensus 788 W~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 788 WSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 2322223334444888888888888876553
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-26 Score=219.32 Aligned_cols=168 Identities=23% Similarity=0.316 Sum_probs=140.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCC-C-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPN-L-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~n-i-----------~~~lv 342 (538)
.+|....+||+|+||.|..|..+ +.+.+|||+++++. .+.+--..|-++|..-..|- + ..|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999854 57789999998743 12233456667776664333 2 45799
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-- 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-- 420 (538)
|||+.+|+|--.+++-+ .+.++.+..+|..||-||-|||+ ++||.||||..||++|.+|.+||+|||+++.--
T Consensus 429 MEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccccC
Confidence 99999999999998877 58899999999999999999999 999999999999999999999999999998421
Q ss_pred ---------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 421 ---------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 421 ---------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
..|+.++|.|||||+||||+.|+.||++...+
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~ 556 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED 556 (683)
T ss_pred CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 11888999999999999999999999975543
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=202.03 Aligned_cols=167 Identities=20% Similarity=0.312 Sum_probs=135.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc--cccHHHHHHHHHHHhcC-CCCCCc-----------ccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC--KLGEKQFLLEMKQVGLL-KHPNLE-----------KPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~e 344 (538)
++......||+|++|.|-+-++ .+|..+|+|+++.. .+..++..+|+.+..+- ..|.++ .++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 3444456799999999988884 57999999999753 34556788888876654 567662 348899
Q ss_pred ecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 345 YMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
.|.- ||..+-.+ ..+..+++...-+|+..+.+||.|||+ ...++|||+||+|||++.+|++|++|||++..+.++
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 9964 88776543 123478899999999999999999999 478999999999999999999999999998754321
Q ss_pred --------------------------CCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 423 --------------------------ASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 423 --------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
|+-|+||||+|+++.||.+++.||+..
T Consensus 203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 888999999999999999999999853
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-26 Score=210.60 Aligned_cols=163 Identities=21% Similarity=0.298 Sum_probs=140.1
Q ss_pred CCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------------cccEE
Q 040267 283 SAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------------EKPLV 342 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------------~~~lv 342 (538)
+..+.||-|+||+||.++. ++|+.||.|++.... .+.+++.+|+++|..++|.|+ +.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4457899999999999984 579999999986422 345788999999999999998 45688
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
+|.|.. +|...+..-. .++-..+.-+..||++||.|||+ .+|.||||||.|.|++.|...||+|||+++..+.+
T Consensus 136 TELmQS-DLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 136 TELMQS-DLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHh-hhhheeccCC--CCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccchh
Confidence 899865 8888876544 68888889999999999999999 99999999999999999999999999999965532
Q ss_pred -------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 423 -------------------------ASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 423 -------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
|+.+.||||.||++.|++.++.-|.....
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 89999999999999999999988875443
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-26 Score=235.77 Aligned_cols=209 Identities=23% Similarity=0.332 Sum_probs=153.6
Q ss_pred CCCCCeEeecCCce-EEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc-----------ccEEEeecCC
Q 040267 282 FSAQNVLVSTWTGT-TYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE-----------KPLVYKYMSN 348 (538)
Q Consensus 282 f~~~~~ig~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~e~~~~ 348 (538)
|...+++|.|+.|+ ||+|.. +|+.||||++-.. ......+||..|+.- .||||+ .||..|.|..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~ 587 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC 587 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence 55567889998875 899998 7889999998542 234567899999988 599994 4588999976
Q ss_pred CCHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---C--CCeEEEeccCCcccCC
Q 040267 349 GTLYSLLHSNGN--TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---D--FDARIMDFGFSRLTNG 421 (538)
Q Consensus 349 gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~--~~~kl~Dfg~a~~~~~ 421 (538)
+|.+++..... ....-.....+..|++.||++||+ .+||||||||.||||+. + .+++|+|||+++.+..
T Consensus 588 -sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 588 -SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred -hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 99999987421 111113456788999999999999 99999999999999975 2 5799999999997654
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHhC-CCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVTG-QKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+ -+.++|+||+||++|+.++| .+||.+.-..+. ++ ..+.. .
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~---NI--------l~~~~-~ 731 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA---NI--------LTGNY-T 731 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh---hh--------hcCcc-c
Confidence 3 45678999999999999995 999985322110 00 00100 0
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
++ .+.. ....++.+++. ++++++|..||++.+|+.
T Consensus 732 L~--~L~~-~~d~eA~dLI~---~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 732 LV--HLEP-LPDCEAKDLIS---RMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ee--eecc-CchHHHHHHHH---HhcCCCcccCCCHHHHhC
Confidence 00 0111 11226666666 999999999999999986
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.5e-24 Score=198.42 Aligned_cols=175 Identities=29% Similarity=0.391 Sum_probs=150.3
Q ss_pred EeecCCceEEEEEeCC-CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHHH
Q 040267 288 LVSTWTGTTYKAMLLD-GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYS 353 (538)
Q Consensus 288 ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~~ 353 (538)
||+|.+|.||++...+ ++.+++|.+..... ..+.+.+|++.++.++|+++ ..++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 5899999999999754 89999999986543 24679999999999999998 3469999999999999
Q ss_pred HhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcccCC-----------
Q 040267 354 LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRLTNG----------- 421 (538)
Q Consensus 354 ~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~----------- 421 (538)
++.... ..+++..+..++.+++++++|||+ .+++|+||+|.||+++. ++.++|+|||.+.....
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGT 156 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCC
Confidence 998752 258999999999999999999999 89999999999999999 89999999998874422
Q ss_pred -------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 488 (538)
..+.++|+|++|++++++
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------- 187 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------- 187 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------------
Confidence 245779999999999998
Q ss_pred HHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 489 ILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+.+++..|++.+|++||++.++++.
T Consensus 188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 234455559999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=220.25 Aligned_cols=179 Identities=20% Similarity=0.245 Sum_probs=147.5
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccccc----HHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
..-|...+.||-|+||.|..+. .++...+|.|.+++...- ......|-.||.....+=+ ..|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 3458888999999999999998 555778999999764321 2346678888888877666 45799
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN-- 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-- 420 (538)
|||++||++-.+|-+.+ .|.+..+..++.++..|+++.|. .|+|||||||.|||||.+|.+||+|||++.-+.
T Consensus 708 MdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceec
Confidence 99999999999998776 68899999999999999999999 999999999999999999999999999986211
Q ss_pred -------C--------------------------------------------------------CCCCccCcccHHHHHH
Q 040267 421 -------G--------------------------------------------------------DASLQKDVHGFGVVLL 437 (538)
Q Consensus 421 -------~--------------------------------------------------------~~~~~~DV~S~Gvvl~ 437 (538)
. .++..+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 0788899999999999
Q ss_pred HHHhCCCCCCCCcccccccccHHHHH
Q 040267 438 ELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 438 elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
||+.|+.||......+.. ..++.|-
T Consensus 863 em~~g~~pf~~~tp~~tq-~kv~nw~ 887 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQ-YKVINWR 887 (1034)
T ss_pred HHhhCCCCccCCCCCcce-eeeeehh
Confidence 999999999876654432 2344553
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-25 Score=219.85 Aligned_cols=166 Identities=16% Similarity=0.223 Sum_probs=143.0
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCC-EEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGS-MLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~-~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++.....||-|+||.|=.++..... .+|+|.+++.. ...+....|-.+|...+.|.| ..|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 4455567999999999999865433 48999887532 223558889999999999988 3468999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
-|-||.|...+++++ .++..+...++..+.+|++|||+ ++||.|||||+|.++|.+|-+||.|||+|+.++..
T Consensus 501 aClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred hhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 999999999999887 69999999999999999999999 99999999999999999999999999999976543
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
...++|.||+|+++|||++|++||...+.
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 56789999999999999999999987543
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=197.40 Aligned_cols=216 Identities=17% Similarity=0.233 Sum_probs=161.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------ccc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKP 340 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~ 340 (538)
..++|....+||+|+|+.|..+.+ ++.+.+|+|++++.- .+.+-...|-.+.... +||.+ ..+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 345788899999999999999995 568899999997532 2234466777777776 57776 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+|.||+++|+|.-+++... .+++..+..+...|.-||.|||+ ++||.||||..|+|+|..|.+||+|||+++.--
T Consensus 328 fvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 8999999999988887665 69999999999999999999999 999999999999999999999999999998421
Q ss_pred -----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 -----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 -----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
+.|...+|.|++||+++||+.|+.||+.-... ....+..+++-+.+.+..+. +
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~-n~d~ntedylfqvilekqir--i- 478 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMD-NPDMNTEDYLFQVILEKQIR--I- 478 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCC-CcccchhHHHHHHHhhhccc--c-
Confidence 12888999999999999999999999853321 12223344443333222111 0
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWS 509 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 509 (538)
+...+-.+..+++ .-+..||.+|.-
T Consensus 479 ----prslsvkas~vlk---gflnkdp~erlg 503 (593)
T KOG0695|consen 479 ----PRSLSVKASHVLK---GFLNKDPKERLG 503 (593)
T ss_pred ----cceeehhhHHHHH---HhhcCCcHHhcC
Confidence 0111122333444 777899998853
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=200.84 Aligned_cols=121 Identities=17% Similarity=0.229 Sum_probs=104.6
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcCC-----CCCC---------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-----HPNL--------------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----H~ni--------------- 337 (538)
.++|...++||.|-|++||.+. ..+.+-||+|+.+....-.+....||++|++++ |++-
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 3578889999999999999999 456789999999877666777889999999985 3332
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
+.+||+|+. |-+|..+|....-+.++...+.+|++||+.||.|||.+ .+|||-||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 557999999 55999999887766799999999999999999999995 479999999999999
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=192.02 Aligned_cols=163 Identities=28% Similarity=0.404 Sum_probs=141.6
Q ss_pred CCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
|...+.||.|++|.||++...+ ++.+|+|.+..... ..+.+.+|++.+.+++|+|+ ..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566789999999999999765 88999999976443 35778999999999999998 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+++|.+++..... .+++.....++.+++.++.|||+ .+++|+|++|+||+++.++.++|+|||.+.....
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 9999999987552 28899999999999999999999 8999999999999999999999999998875422
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
..+.++|||+||++++||++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 134689999999999999999999964
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=194.42 Aligned_cols=160 Identities=26% Similarity=0.343 Sum_probs=132.6
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccc---ccccHHHHHHHHHHHhcCCCCCC-----------------cc
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSA---CKLGEKQFLLEMKQVGLLKHPNL-----------------EK 339 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~H~ni-----------------~~ 339 (538)
+|.....+|.|.- .|-.+. .-.+++||+|++.. .....++..+|...+..+.|+|| ..
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555566777776 455554 33588999999853 22344678899999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+|||||.. +|.+.++. .++-.+...|..|++.|+.|||+ .+|+||||||+||++..+..+||.|||+|+..
T Consensus 97 y~v~e~m~~-nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVILM----ELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHhhhh-HHHHHHHH----hcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhccc
Confidence 699999965 99998883 47788899999999999999999 99999999999999999999999999999854
Q ss_pred CCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCC
Q 040267 420 NGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEIN 449 (538)
Q Consensus 420 ~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~ 449 (538)
... +.+.+||||.||++.||++|+.-|.+.
T Consensus 169 ~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 169 DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 322 788999999999999999999888753
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-23 Score=208.79 Aligned_cols=218 Identities=19% Similarity=0.257 Sum_probs=170.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccc-cHHHHHHHHHHHhcCCCCCCc-----------ccEEEe
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKL-GEKQFLLEMKQVGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e 344 (538)
..++|.....+|.|.||.|||++ ...++..|+|.++.... ...-...|+-+++..+||||+ .++.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 34577888899999999999999 56799999999986443 234567899999999999993 359999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
||.+|+|++.-+..+ .+++.++..+++...+||+|||+ .+=+|||||-.||++++.+.+|++|||.+..++..
T Consensus 93 ycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~ 167 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA 167 (829)
T ss_pred ecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhhh
Confidence 999999999888776 69999999999999999999999 88899999999999999999999999998755432
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
|.+++|||+.|+...|+---+.|..+.-. .+ +..+...... -.+
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--------mr-~l~LmTkS~~---qpp 235 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--------MR-ALFLMTKSGF---QPP 235 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch--------HH-HHHHhhccCC---CCC
Confidence 88999999999999999887777543111 01 1111111111 112
Q ss_pred cccC-CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTG-KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.. ..+.+.+..|++ .|+..+|.+|||++..+.
T Consensus 236 ~lkDk~kws~~fh~fvK---~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 236 TLKDKTKWSEFFHNFVK---GALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cccCCccchHHHHHHHH---HHhcCCCccCCChhhhee
Confidence 2222 235556666666 999999999999987654
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=201.85 Aligned_cols=170 Identities=24% Similarity=0.247 Sum_probs=142.6
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCC------CC-----------ccc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHP------NL-----------EKP 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~------ni-----------~~~ 340 (538)
...|.+....|+|-|++|.+|. ...|..||||+++......+.=+.|+++|++|... ++ +.|
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 3568888889999999999999 44588999999988766666677899998888511 11 668
Q ss_pred EEEeecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCcc
Q 040267 341 LVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSRL 418 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~ 418 (538)
||+|-+.- +|.++|++.+ ...|....+..++.|+.-||..|.. .+|+|.||||.|||+++. ..+||||||.|..
T Consensus 511 lVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 511 LVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred EEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCccccc
Confidence 99999854 9999999865 3457888899999999999999999 999999999999999976 5689999999986
Q ss_pred cCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 419 TNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 419 ~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
.... |....|+||.||+|||+.||+.-|.+....
T Consensus 587 ~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 587 ASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred cccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 5542 888999999999999999999999865543
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=177.66 Aligned_cols=152 Identities=16% Similarity=0.183 Sum_probs=109.5
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.++++..+ ..++|.++..|+.|++.||+|||+ .+ ||+||+++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~ 68 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDP 68 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccccCCCcc
Confidence 78999998644 369999999999999999999999 44 999999999999999 999875422
Q ss_pred -----------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHH-
Q 040267 422 -----------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEI- 489 (538)
Q Consensus 422 -----------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~- 489 (538)
.++.++|||||||++|||+||+.||...... ...+..+..... .. ++.-. .......
T Consensus 69 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~-~~------~~~~~-~~~~~~~~ 137 (176)
T smart00750 69 YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL---SAILEILLNGMP-AD------DPRDR-SNLESVSA 137 (176)
T ss_pred cccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh---cHHHHHHHHHhc-cC------Ccccc-ccHHHHHh
Confidence 2788999999999999999999999743221 111111111111 00 00000 0011111
Q ss_pred -HHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 490 -LQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 490 -~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+.+++.+||+.+|++||++.|+++.+..+..+
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 1466667799999999999999999998876543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-22 Score=198.64 Aligned_cols=165 Identities=19% Similarity=0.256 Sum_probs=139.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccH---------HHHHHHHHHHhcCC---CCCC-------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGE---------KQFLLEMKQVGLLK---HPNL------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~E~~~l~~l~---H~ni------- 337 (538)
.-.+|+..+.+|+|+||.|+.|.++ +...|+||.+.+.+--. ...-.||++|..++ |+||
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3456888899999999999999965 46789999997644211 22556999999997 9999
Q ss_pred ----cccEEEee-cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 338 ----EKPLVYKY-MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 338 ----~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
..||++|- -++-+|++++.... .+++.++..|++||+.|+++||+ .+|||||||-+|+.+|.+|-+||+|
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEee
Confidence 34577776 35569999998776 69999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCC
Q 040267 413 FGFSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 413 fg~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
||.|.....+ ....-|||++|++||-++....||.
T Consensus 714 fgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999865432 4567899999999999999999986
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-21 Score=190.20 Aligned_cols=167 Identities=20% Similarity=0.268 Sum_probs=139.9
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEe-C---CCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC-----------c
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAML-L---DGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL-----------E 338 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni-----------~ 338 (538)
+....+.|...++||+|.|++||++.. . ..+.||+|.+..... ..++.+|+++|..+. +.|| .
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 445566788999999999999999993 3 467899999976443 467899999999995 7776 4
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSR 417 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~ 417 (538)
..+|+||++.-.-.++... ++..++..+++.+..||+++|. +|||||||||+|+|.+.. +.-.|.|||+|.
T Consensus 110 v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHH
Confidence 4699999999888888864 7788999999999999999999 999999999999999854 678999999987
Q ss_pred ccC-----------------C---C------------------------------------------------CCCccCc
Q 040267 418 LTN-----------------G---D------------------------------------------------ASLQKDV 429 (538)
Q Consensus 418 ~~~-----------------~---~------------------------------------------------~~~~~DV 429 (538)
... . . .+++.||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 110 0 0 5678999
Q ss_pred ccHHHHHHHHHhCCCCCCCCc
Q 040267 430 HGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 430 ~S~Gvvl~elltg~~p~~~~~ 450 (538)
||-||+++-+++++.||....
T Consensus 262 ws~GVI~Lslls~~~PFf~a~ 282 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAK 282 (418)
T ss_pred eeccceeehhhccccccccCc
Confidence 999999999999999997543
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-21 Score=207.39 Aligned_cols=155 Identities=31% Similarity=0.435 Sum_probs=123.9
Q ss_pred CCChhhHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCCcccccccCCCC---CCCEEEEEcCCCCccccCcccccCCCCC
Q 040267 7 ATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGL---ENRILSLELEEMNLSGQVPESLQSCKSL 82 (538)
Q Consensus 7 ~~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~~~~~~~c~w~gv~C~~~~---~~~l~~L~L~~n~l~g~~p~~~~~l~~L 82 (538)
.+...|+.+|+.+| ++.++. ..+|... ++.+..|.|.||.|..+. ...|+.|+|++|+|+|.+|..++.+++|
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~--~~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPL--RFGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcc--cCCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 34567999999999 776653 2489742 222223489999995321 1358999999999999999999999999
Q ss_pred CeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCC-ccccEEecc
Q 040267 83 QVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSL-VRLKQFSVA 161 (538)
Q Consensus 83 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l-~~L~~l~l~ 161 (538)
+.|+|++|+|+|.+|..+.. +++|+.|||++|+++|.+|..++++++|+.|+|++|+|+|.+|..+..+ .++..++++
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~-l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~ 523 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGS-ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFT 523 (623)
T ss_pred CEEECCCCcccCcCChHHhC-CCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEec
Confidence 99999999999999998877 9999999999999999999999999999999999999999999887653 345556655
Q ss_pred cccC
Q 040267 162 YNCL 165 (538)
Q Consensus 162 ~N~l 165 (538)
+|..
T Consensus 524 ~N~~ 527 (623)
T PLN03150 524 DNAG 527 (623)
T ss_pred CCcc
Confidence 5543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.1e-21 Score=191.23 Aligned_cols=134 Identities=18% Similarity=0.180 Sum_probs=110.3
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEeC--CCCEEEEEEcccc------cccHHHHHHHHHHHhcCCCCCCc--------c
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAMLL--DGSMLAIKRLSAC------KLGEKQFLLEMKQVGLLKHPNLE--------K 339 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~H~ni~--------~ 339 (538)
....++|...+.||+|+||+||+|... +++.||||++... ....+.+.+|+++|++++|+|++ .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~ 93 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKD 93 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCc
Confidence 345567999999999999999999854 5778899987532 11245689999999999999983 5
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCC-CCCCeeeCCCCCeEEEeccCCcc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI-SSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
++||||+++++|... ... . ...++.++++||+|||+ .+|+|||| ||+|||++.++.+||+|||+|+.
T Consensus 94 ~LVmE~~~G~~L~~~-~~~-----~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 94 GLVRGWTEGVPLHLA-RPH-----G---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred EEEEEccCCCCHHHh-Ccc-----c---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 799999999999732 111 1 14678999999999999 99999999 99999999999999999999996
Q ss_pred cCC
Q 040267 419 TNG 421 (538)
Q Consensus 419 ~~~ 421 (538)
+..
T Consensus 162 ~~~ 164 (365)
T PRK09188 162 FRR 164 (365)
T ss_pred ccc
Confidence 643
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.6e-21 Score=176.89 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=105.5
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccc---c-------HHHH-----------------HHHHHHHhcCCCCCC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---G-------EKQF-----------------LLEMKQVGLLKHPNL 337 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~-------~~~~-----------------~~E~~~l~~l~H~ni 337 (538)
...||+|++|.||+|...+|+.||||+++.... . ..+| ..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 367999999999999987899999999975321 1 1122 349999999976665
Q ss_pred ---------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCccccCCCCCCeeeCCCCC
Q 040267 338 ---------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL-HHCCHPPCLHQNISSSVILVDEDFD 407 (538)
Q Consensus 338 ---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~Dlkp~NIll~~~~~ 407 (538)
..++||||++++++........ .+++.+..+++.|++.+|.|+ |+ .+|+||||||+||+++ ++.
T Consensus 82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~--~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILLKSHVLVMEFIGDDGWAAPRLKDA--PLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEecCCEEEEEEeCCCCCcchhhhcC--CCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-CCc
Confidence 2379999999987765533322 588999999999999999999 67 8999999999999998 478
Q ss_pred eEEEeccCCcccCC
Q 040267 408 ARIMDFGFSRLTNG 421 (538)
Q Consensus 408 ~kl~Dfg~a~~~~~ 421 (538)
++|+|||+|.....
T Consensus 156 v~LiDFG~a~~~~~ 169 (190)
T cd05147 156 LYIIDVSQSVEHDH 169 (190)
T ss_pred EEEEEccccccCCC
Confidence 99999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-21 Score=219.60 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=111.2
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---------------
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD--------------- 403 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--------------- 403 (538)
.+.++||+ +++|.+++.... ..+++.+++.++.||++||+|||+ ++|+||||||+|||++
T Consensus 55 ~~~~~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~ 129 (793)
T PLN00181 55 IVRALECE-DVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHS---QGIVVHNVRPSCFVMSSFNHVSFIESASCSD 129 (793)
T ss_pred hhhhhccC-CccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHh---CCeeeccCCchhEEEcccCcEEEeeccccCc
Confidence 35678887 559999997543 359999999999999999999999 9999999999999994
Q ss_pred ----CCCCeEEEeccCCccc---------------------------------------CCCCCCccCcccHHHHHHHHH
Q 040267 404 ----EDFDARIMDFGFSRLT---------------------------------------NGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 404 ----~~~~~kl~Dfg~a~~~---------------------------------------~~~~~~~~DV~S~Gvvl~ell 440 (538)
.++.+|++|||+++.. ...++.++|||||||+||||+
T Consensus 130 ~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl 209 (793)
T PLN00181 130 SGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELF 209 (793)
T ss_pred ccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHh
Confidence 3566788888887521 011788999999999999999
Q ss_pred hCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 441 TGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 441 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+|..|+..... .+...... ...+.. .........++.+||+++|.+||+|.||++.
T Consensus 210 ~~~~~~~~~~~------~~~~~~~~---------~~~~~~-----~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 210 CPVSSREEKSR------TMSSLRHR---------VLPPQI-----LLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred hCCCchhhHHH------HHHHHHHh---------hcChhh-----hhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 99888653110 01111100 011110 1112234456679999999999999999863
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-20 Score=216.33 Aligned_cols=167 Identities=32% Similarity=0.566 Sum_probs=121.6
Q ss_pred CChhhHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEE
Q 040267 8 TAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLN 86 (538)
Q Consensus 8 ~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~~~~~~~c~w~gv~C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~ 86 (538)
+...|..+|+.|| ++.+|.+.+.+|+.. .++|.|.||+|++ .++|+.|+|++|+++|.+|+.|..+++|+.|+
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~----~~~c~w~gv~c~~--~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~ 99 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSS----ADVCLWQGITCNN--SSRVVSIDLSGKNISGKISSAIFRLPYIQTIN 99 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCC----CCCCcCcceecCC--CCcEEEEEecCCCccccCChHHhCCCCCCEEE
Confidence 3457899999999 888888788999642 3689999999975 46899999999999999999999999999999
Q ss_pred ccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCC----------------------ccCcCCCCCcEeeecCccccCC
Q 040267 87 LSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP----------------------HELGNCVYLNTLYLSYNRLSGP 144 (538)
Q Consensus 87 Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p----------------------~~~~~l~~L~~L~ls~N~l~g~ 144 (538)
|++|+++|.+|..++..+++|++|+|++|+++|.+| ..++++++|++|+|++|.+++.
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 179 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK 179 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccccc
Confidence 999999999998887447777777777777766555 3444455555555555555555
Q ss_pred CCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 145 LPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 145 ~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+|..+.++++|++|++++|.+++.+|..+.++.+|+
T Consensus 180 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 215 (968)
T PLN00113 180 IPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLK 215 (968)
T ss_pred CChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCcc
Confidence 555555555555555555555555555444444443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=170.48 Aligned_cols=234 Identities=16% Similarity=0.210 Sum_probs=173.5
Q ss_pred CCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC-----------cccEEEeecC
Q 040267 281 NFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~e~~~ 347 (538)
+|.+.++||+|+||+.+.|+ +-+++.||||.-.. +....++..|.+..+.|. -++| ...||+|..
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 68889999999999999999 67899999997543 333457788888877774 4555 234899998
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-----CCeEEEeccCCcccCCC
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-----FDARIMDFGFSRLTNGD 422 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~a~~~~~~ 422 (538)
|.||+|+..-.++ .++..+...||+|++.-++|+|+ +.+|.|||||+|+||..- ..+.++|||+|+.+.+.
T Consensus 107 GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 107 GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 6799998876553 69999999999999999999999 999999999999999743 45899999999976543
Q ss_pred ------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 423 ------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 423 ------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
-+...|.-|+|-++++.+-|..||.+.... ...+-..+. ++-
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-----tnK~kYeKI---Ge~ 254 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-----TNKEKYEKI---GET 254 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-----chHHHHHHh---ccc
Confidence 456789999999999999999999863321 111111111 111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcccc
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYE 531 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~ 531 (538)
+........-+..++++...++.+ -..+-.+-|..+-+...+.++.+..+..+|.+
T Consensus 255 Kr~T~i~~Lc~g~P~efa~Yl~yv---R~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~ 310 (449)
T KOG1165|consen 255 KRSTPIEVLCEGFPEEFATYLRYV---RRLDFFETPDYDYLRKLFDDVLDRLGETDDGE 310 (449)
T ss_pred cccCCHHHHHhcCHHHHHHHHHHH---HhcCcccCCCHHHHHHHHHHHHHhcCCccccc
Confidence 111000001123456666666633 35677888999999999999998888776543
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.4e-20 Score=169.23 Aligned_cols=132 Identities=17% Similarity=0.143 Sum_probs=107.5
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEccccccc---------------------------HHHHHHHHHHHhcCCCCCC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG---------------------------EKQFLLEMKQVGLLKHPNL 337 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~E~~~l~~l~H~ni 337 (538)
...||+|++|.||+|...+|+.||||.++..... ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3679999999999999778999999998753210 1124578999999999887
Q ss_pred ---------cccEEEeecCCCCHHHH-hhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC
Q 040267 338 ---------EKPLVYKYMSNGTLYSL-LHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD 407 (538)
Q Consensus 338 ---------~~~lv~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 407 (538)
..++||||++++++... +.. . .++..+..+++.+++.++.|+|+ ..+|+||||||+||+++ ++.
T Consensus 82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~-~--~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLKKNVLVMEFIGDDGSPAPRLKD-V--PLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEecCCEEEEEEecCCCchhhhhhh-c--cCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-CCC
Confidence 23799999998865443 433 2 47788999999999999999997 36899999999999999 789
Q ss_pred eEEEeccCCcccCCC
Q 040267 408 ARIMDFGFSRLTNGD 422 (538)
Q Consensus 408 ~kl~Dfg~a~~~~~~ 422 (538)
++|+|||++......
T Consensus 156 ~~liDFG~a~~~~~~ 170 (190)
T cd05145 156 PYIIDVSQAVELDHP 170 (190)
T ss_pred EEEEEcccceecCCC
Confidence 999999999877543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7e-19 Score=177.25 Aligned_cols=230 Identities=17% Similarity=0.172 Sum_probs=168.0
Q ss_pred CCCCCCeEeecCCceEEEEEeCCC--CEEEEEEcccccc-cHHHHHHHHHHHhcCCC----CCC------------cccE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDG--SMLAIKRLSACKL-GEKQFLLEMKQVGLLKH----PNL------------EKPL 341 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~--~~vavK~~~~~~~-~~~~~~~E~~~l~~l~H----~ni------------~~~l 341 (538)
+|...+.||+|+||.||.+..... ..+|+|.-..... ....+..|+.++..+.. +++ ..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 789999999999999999995443 4788888764321 12267788888888862 122 4579
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-----CCeEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-----FDARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~a 416 (538)
||+.+ |.+|.++........++..+.++|+.|++.+|+++|+ .+++||||||.|+.+... ..++|.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 6799998876655689999999999999999999999 999999999999999854 46999999999
Q ss_pred c--cc---------CC---C-------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 417 R--LT---------NG---D-------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 417 ~--~~---------~~---~-------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
+ .. .. . .+.+.|+||++.++.|+..|..||........ ..-+
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~~~~ 249 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----KSKF 249 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----HHHH
Confidence 8 21 00 0 56788999999999999999999975332111 1111
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
...... ..... .....+.+...+.. .+-+.+..++|....+...+++...+.+...
T Consensus 250 ~~~~~~----~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~ 305 (322)
T KOG1164|consen 250 EKDPRK----LLTDR--FGDLKPEEFAKILE---YIDSLDYEDKPDYEKLAELLKDVFDSEGSKE 305 (322)
T ss_pred HHHhhh----hcccc--ccCCChHHHHHHHH---HhhccCCcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 111100 00010 11223445555555 6666899999999999999999887765443
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-20 Score=173.79 Aligned_cols=217 Identities=23% Similarity=0.335 Sum_probs=161.0
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
.+|.+...|..|+|++ .|..+++|++.... ...++|..|.-.|+.+.|||| ...++..||+.|+|
T Consensus 196 tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 3577888899999999 55566677775322 234679999999999999999 34589999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE--eccCCccc-----CCC--
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM--DFGFSRLT-----NGD-- 422 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~--Dfg~a~~~-----~~~-- 422 (538)
+..+++.....++-.++.+++.++|+|++|||+. .+-|.---+.+..+++|++.+++|+ |--++... .+.
T Consensus 275 ynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawm 353 (448)
T KOG0195|consen 275 YNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWM 353 (448)
T ss_pred HHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccC
Confidence 9999998777788899999999999999999983 2334445689999999999998874 32222211 110
Q ss_pred ------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHH
Q 040267 423 ------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEIL 490 (538)
Q Consensus 423 ------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 490 (538)
.-.++|+|||.+++||+.|++.||.+....+... ++.-..++...++....
T Consensus 354 spealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-----------------kialeglrv~ippgis~ 416 (448)
T KOG0195|consen 354 SPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-----------------KIALEGLRVHIPPGISR 416 (448)
T ss_pred CHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-----------------hhhhccccccCCCCccH
Confidence 3357899999999999999999998755433211 11112222233333444
Q ss_pred HHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 491 QFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 491 ~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.+.+++.-|+..||.+||.+..|+-.|+++.
T Consensus 417 hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 4555666999999999999999999998764
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.4e-20 Score=173.09 Aligned_cols=148 Identities=13% Similarity=0.126 Sum_probs=121.2
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHH----------HHHHHHHHhcCCCCCC----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQ----------FLLEMKQVGLLKHPNL---------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~----------~~~E~~~l~~l~H~ni---------- 337 (538)
..++|...+++|.|+||.||.+.. ++..+|+|.++......+. +.+|++.+.+++|++|
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467899999999999999999655 5778999999753322222 5789999999999998
Q ss_pred ---------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 338 ---------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 338 ---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
..+++|||++|.+|.++.. ++. ....+++.++..+|+ .+++|||+||+||++++++ +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-E
Confidence 1468999999999988732 232 345699999999999 9999999999999999988 9
Q ss_pred EEEeccCCcccCCC-----------CCCccCcccHHHHHHHHH
Q 040267 409 RIMDFGFSRLTNGD-----------ASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 409 kl~Dfg~a~~~~~~-----------~~~~~DV~S~Gvvl~ell 440 (538)
+|+|||........ +..++|+||||+++....
T Consensus 174 ~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHHH
Confidence 99999998866442 668999999999987543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.2e-19 Score=160.45 Aligned_cols=233 Identities=18% Similarity=0.236 Sum_probs=167.4
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC----CCC--------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH----PNL--------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H----~ni--------~~~lv~e~ 345 (538)
.++|...++||.|+||.+|.|. +.+|..||||.-+... ...++..|.++.+.++| |+| ...+|||.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 3568888999999999999999 6789999999865422 23467778888888864 444 33599999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCcccCCC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLTNGD 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~ 422 (538)
. |.+|+++..-.. +.++..+.+-.+-|++.-++|+|. +++|||||||+|+|..-+ ..+.++|||+|+.+.+.
T Consensus 93 L-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 93 L-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred c-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 8 679999886543 268999999999999999999999 999999999999998743 46899999999965431
Q ss_pred ------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 423 ------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 423 ------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.+...|+-|+|.+|....-|..||.+..... ...-...+.+.+.
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t------k~QKyEkI~EkK~ 241 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT------KKQKYEKISEKKM 241 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh------HHHHHHHHHHhhc
Confidence 4567899999999999999999998633211 1111111111111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
...+... -...+.|..-.+. -|-..--++-|...-+.+.+.-+...+....
T Consensus 242 s~~ie~L--C~G~P~EF~myl~---Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~ 292 (341)
T KOG1163|consen 242 STPIEVL--CKGFPAEFAMYLN---YCRGLGFEEKPDYMYLRQLFRILFRTLNHQY 292 (341)
T ss_pred CCCHHHH--hCCCcHHHHHHHH---HHhhcCCCCCCcHHHHHHHHHHHHhhccccC
Confidence 1111111 1223334444444 8888888889998888777766655554443
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-18 Score=156.96 Aligned_cols=155 Identities=19% Similarity=0.130 Sum_probs=121.6
Q ss_pred CCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccH-----HHHHHHHHHHhcCCC-CCC-------cccEEEeecCCC
Q 040267 283 SAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGE-----KQFLLEMKQVGLLKH-PNL-------EKPLVYKYMSNG 349 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~-----~~~~~E~~~l~~l~H-~ni-------~~~lv~e~~~~g 349 (538)
.....|++|+||+||.+.- ++.+++.+.+....... ..+.+|+++|+++.| +++ ..+++|||++|.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~ 83 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGA 83 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCc
Confidence 4557899999999997766 67888888887654322 257899999999954 555 347999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCC-CCCCeeeCCCCCeEEEeccCCcccCCC------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI-SSSVILVDEDFDARIMDFGFSRLTNGD------ 422 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg~a~~~~~~------ 422 (538)
+|.+.+.. ....++.|++++|.++|+ .+|+|||| ||+|||++.++.++|+|||+|......
T Consensus 84 ~L~~~~~~---------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~ 151 (218)
T PRK12274 84 AMYQRPPR---------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL 151 (218)
T ss_pred cHHhhhhh---------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence 98764321 113578899999999999 99999999 799999999999999999999844321
Q ss_pred -------------------------------CC-CccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 423 -------------------------------AS-LQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 423 -------------------------------~~-~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.+ ...+.++-|.-+|.++||+.+...+.
T Consensus 152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 11 23578899999999999998876543
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-18 Score=162.62 Aligned_cols=136 Identities=15% Similarity=0.080 Sum_probs=109.7
Q ss_pred CCCCCCeEeecCCceEEEEE--eCCCCEEEEEEcccccc-------------------------cHHHHHHHHHHHhcCC
Q 040267 281 NFSAQNVLVSTWTGTTYKAM--LLDGSMLAIKRLSACKL-------------------------GEKQFLLEMKQVGLLK 333 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~--~~~~~~vavK~~~~~~~-------------------------~~~~~~~E~~~l~~l~ 333 (538)
.|...+.||+|++|.||+|. ..+|+.||+|.++.... ....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777899999999999998 56899999999864321 0123568999999997
Q ss_pred CCCC---------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-ccccCCCCCCeeeC
Q 040267 334 HPNL---------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP-CLHQNISSSVILVD 403 (538)
Q Consensus 334 H~ni---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlkp~NIll~ 403 (538)
+..+ ..++||||+++++|........ .+...+...++.|++.+++|||+ .+ |+||||||+||+++
T Consensus 109 ~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeEecCceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhhEEEE
Confidence 6443 3579999999988877653322 35566678999999999999999 88 99999999999999
Q ss_pred CCCCeEEEeccCCcccCCC
Q 040267 404 EDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~ 422 (538)
+++++|+|||.+...+..
T Consensus 184 -~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 184 -DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred -CCCEEEEEChhhhccCCc
Confidence 889999999998876543
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=154.70 Aligned_cols=137 Identities=18% Similarity=0.126 Sum_probs=109.3
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc-----------------------cHHHHHHHHHHHh
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-----------------------GEKQFLLEMKQVG 330 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~E~~~l~ 330 (538)
++......|...+.||+|+||.||++...+|+.||||+++.... ....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 33333334777899999999999999988899999998754221 0123667888998
Q ss_pred cCCCCCC---------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCee
Q 040267 331 LLKHPNL---------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401 (538)
Q Consensus 331 ~l~H~ni---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 401 (538)
.+.|+++ ..++||||+++++|.+.... ....+++.+++.++.++|+ .+|+||||||+||+
T Consensus 89 ~l~~~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nil 157 (198)
T cd05144 89 ALYEEGFPVPKPIDWNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNIL 157 (198)
T ss_pred HHHHcCCCCCceeecCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEE
Confidence 8887754 45799999999999765431 2346788999999999999 99999999999999
Q ss_pred eCCCCCeEEEeccCCcccCC
Q 040267 402 VDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 402 l~~~~~~kl~Dfg~a~~~~~ 421 (538)
+++++.++|+|||++.....
T Consensus 158 l~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EcCCCcEEEEECCccccCCC
Confidence 99999999999999866544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-17 Score=169.50 Aligned_cols=183 Identities=22% Similarity=0.405 Sum_probs=138.5
Q ss_pred HhcCCCCCCc-----------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc-cccCCC
Q 040267 329 VGLLKHPNLE-----------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPC-LHQNIS 396 (538)
Q Consensus 329 l~~l~H~ni~-----------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-vH~Dlk 396 (538)
|+.+.|.|+. .++|.+||..|+|.|.+.... ..++|.-...+.++|+.||+|+|. .+| .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHN---SPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeeec
Confidence 3567888883 358999999999999998744 468999999999999999999999 555 999999
Q ss_pred CCCeeeCCCCCeEEEeccCCcccCCC--------------------------------CCCccCcccHHHHHHHHHhCCC
Q 040267 397 SSVILVDEDFDARIMDFGFSRLTNGD--------------------------------ASLQKDVHGFGVVLLELVTGQK 444 (538)
Q Consensus 397 p~NIll~~~~~~kl~Dfg~a~~~~~~--------------------------------~~~~~DV~S~Gvvl~elltg~~ 444 (538)
++|.++|..+.+||+|||+....... .+.++||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999999999999998876310 4678999999999999999999
Q ss_pred CCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 445 PFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 445 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
||......... ..++.++.. .....+.|.+.... +....++.++..||..+|.+||+++.|-..++.+...
T Consensus 157 ~~~~~~~~~~~-~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 157 PFDLRNLVEDP-DEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccccccCCh-HHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 99865443322 223333322 11222223222111 1222466677799999999999999999988876653
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-18 Score=183.72 Aligned_cols=211 Identities=24% Similarity=0.243 Sum_probs=153.9
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc--ccH---HHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK--LGE---KQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~--~~~---~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++...+.+|.+.|=.|.+|+.+.|. |+||++-+.. ..- .+...|++ ....+|||. ..|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666788999999999999988887 8899884322 222 33444555 566689998 2357888
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC--C-
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--G- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--~- 421 (538)
|..+ +|+|.+..+. .+...+.+-|+.|++.||.-+|. .+|+|||||.+|||++...-+.|+||..-+... .
T Consensus 102 yvkh-nLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 8876 8999888765 67888999999999999999999 999999999999999999899999997655211 0
Q ss_pred -------------------------------------C-CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 422 -------------------------------------D-ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 422 -------------------------------------~-~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
. .+++.||||.||++.||++ |++||.-. .+..+
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--------QL~aY 247 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--------QLLAY 247 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--------HHHhH
Confidence 0 5778999999999999998 78888621 11111
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
+.+. .......+ ....+ ..+.++++.|++.||++|-++++.++.-
T Consensus 248 -----r~~~-~~~~e~~L-e~Ied---~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 248 -----RSGN-ADDPEQLL-EKIED---VSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred -----hccC-ccCHHHHH-HhCcC---ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 1110 00000000 00111 1355677799999999999999999873
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.9e-18 Score=181.08 Aligned_cols=217 Identities=19% Similarity=0.182 Sum_probs=151.9
Q ss_pred CCCCeEeecCCceEEEEEe-CCCCEEEEEEcc----ccccc---HHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 283 SAQNVLVSTWTGTTYKAML-LDGSMLAIKRLS----ACKLG---EKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~----~~~~~---~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
....++|.|.+|.|+.... ......+.|..+ ..... ...+..|..+-..++|+|+ ..+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 3567899999998887773 334445555433 11111 1225667888888999997 122359
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|||++ +|+.++...+ .++..++-.++.|+..|+.|+|+ .+|.|||+|++|++++.++.+||+|||.+....-.
T Consensus 401 E~~~~-Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 9999998764 58888999999999999999999 99999999999999999999999999998743211
Q ss_pred ---------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 423 ---------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 423 ---------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.....||||.|+++..|++|+.||......+... ............
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------~~~~~~~~~~~~ 547 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------KTNNYSDQRNIF 547 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------hhhccccccccc
Confidence 2346799999999999999999998543322110 000000000000
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+ .............++.++++.||.+|.|+++|++
T Consensus 548 ~~~---~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 548 EGP---NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cCh---HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000 0011222333455666999999999999999986
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7e-17 Score=152.64 Aligned_cols=124 Identities=17% Similarity=0.272 Sum_probs=104.5
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+.||+|++|.||+|.. +|..|++|....... ...++.+|++++..++|+++ ..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 677899998653221 12457889999999998887 34589999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+++++|.+++.... + .+..++.+++.+|.++|+ .+++|+|++|.||+++ ++.++|+|||.+....
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence 99999999987533 2 888999999999999999 9999999999999999 7899999999987643
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.6e-17 Score=151.87 Aligned_cols=132 Identities=17% Similarity=0.235 Sum_probs=106.5
Q ss_pred eEeecCCceEEEEEeCCCCEEEEEEccccc--c-------cHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 287 VLVSTWTGTTYKAMLLDGSMLAIKRLSACK--L-------GEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~--~-------~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.||+|++|.||+|.. ++..|++|...... . ...++.+|++++..++|+++ ..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999995 67889999864321 1 12557789999999988876 337999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCc
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQ 426 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 426 (538)
++++|.+++.... . .++.+++.+|.+||+ .+++|+|++|.||+++ ++.+++.|||++..........
T Consensus 80 ~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~~~~~ 146 (199)
T TIGR03724 80 EGKPLKDVIEEGN---D------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIEDKA 146 (199)
T ss_pred CCccHHHHHhhcH---H------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcHHhhh
Confidence 9999999876532 1 889999999999999 9999999999999999 8899999999988765544445
Q ss_pred cCcccH
Q 040267 427 KDVHGF 432 (538)
Q Consensus 427 ~DV~S~ 432 (538)
.|++.+
T Consensus 147 ~~~~~~ 152 (199)
T TIGR03724 147 VDLHVL 152 (199)
T ss_pred chHHHH
Confidence 555433
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.3e-17 Score=156.38 Aligned_cols=197 Identities=17% Similarity=0.240 Sum_probs=129.3
Q ss_pred CCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCC-CC---------C-----------
Q 040267 284 AQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKH-PN---------L----------- 337 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H-~n---------i----------- 337 (538)
....||.|+++.||.++. .+++.+|+|.+... ....+++.+|.-....+.+ .| +
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 457899999999999995 45899999998432 2234567777655555433 11 1
Q ss_pred -----------------cccEEEeecCCCCHHHHhhc---CCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCC
Q 040267 338 -----------------EKPLVYKYMSNGTLYSLLHS---NGN--TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395 (538)
Q Consensus 338 -----------------~~~lv~e~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl 395 (538)
..+++|+-+. ++|.+++.. ... ..+....++.+..|+++.+++||+ .+++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEeccc
Confidence 2246777774 588888653 221 124455677888999999999999 99999999
Q ss_pred CCCCeeeCCCCCeEEEeccCCcccCCC----------------------------CCCccCcccHHHHHHHHHhCCCCCC
Q 040267 396 SSSVILVDEDFDARIMDFGFSRLTNGD----------------------------ASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 396 kp~NIll~~~~~~kl~Dfg~a~~~~~~----------------------------~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
||+|++++++|.++|+||+.....+.. ++.+.|.|++|+++|.|.+++.||.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999876533211 5778899999999999999999998
Q ss_pred CCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCC
Q 040267 448 INASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEK 507 (538)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R 507 (538)
.......... .+..+ ...++.++.++. ..++++|.+|
T Consensus 252 ~~~~~~~~~~-----------------~f~~C---~~~Pe~v~~LI~---~lL~~~~~~R 288 (288)
T PF14531_consen 252 LSSPEADPEW-----------------DFSRC---RDMPEPVQFLIR---GLLQRNPEDR 288 (288)
T ss_dssp CCGGGSTSGG-----------------GGTTS---S---HHHHHHHH---HHT-SSGGGS
T ss_pred CCCccccccc-----------------cchhc---CCcCHHHHHHHH---HHccCCcccC
Confidence 6443221110 11111 124455555555 9999999988
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=149.55 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=96.1
Q ss_pred CCCCCeEeecCCceEEEEEeCCCCEEEEEEcccc-cccHHHHHHHHHHHhcC-----CCCCCcc---------------c
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSAC-KLGEKQFLLEMKQVGLL-----KHPNLEK---------------P 340 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l-----~H~ni~~---------------~ 340 (538)
.+..+.||+|++|.||. .++....+||++... ....+.+.+|+++++.+ .||||.+ .
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34568899999999996 443333479988653 23456799999999999 5799922 1
Q ss_pred EEEee--cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCccccCCCCCCeeeCC----CCCeEEEec
Q 040267 341 LVYKY--MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGL-SWLHHCCHPPCLHQNISSSVILVDE----DFDARIMDF 413 (538)
Q Consensus 341 lv~e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~Df 413 (538)
+|+|| +++|+|.+++... .+++. ..++.+++.++ +|||+ .+|+||||||+|||++. +..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 68999 6689999999763 25555 36678888888 99999 99999999999999974 347999995
Q ss_pred cCC
Q 040267 414 GFS 416 (538)
Q Consensus 414 g~a 416 (538)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 443
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=152.23 Aligned_cols=224 Identities=26% Similarity=0.333 Sum_probs=160.4
Q ss_pred CCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCC-CC-----------cccEEEee
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHP-NL-----------EKPLVYKY 345 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~-ni-----------~~~lv~e~ 345 (538)
|...+.||.|.||.||++... ..+++|.+..... ....+.+|+.++..+.|+ ++ ..+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 556678999999999999976 8899999975332 356799999999999988 57 23699999
Q ss_pred cCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccC---
Q 040267 346 MSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTN--- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~--- 420 (538)
+.++++.+++..... ..++......+..|++.++.|+|+ .+++|||+||+||+++... .++++|||.++...
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765431 158889999999999999999999 8899999999999999988 79999999876221
Q ss_pred -----------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 421 -----------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 421 -----------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
...+...|+||+|++++++++|..||....... ........+...... .
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~-~ 234 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS-ATSQTLKIILELPTP-S 234 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc-cHHHHHHHHHhcCCc-c
Confidence 123457899999999999999999976433210 000111111111100 0
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
... .............+.+++..|+..+|..|.++.+....
T Consensus 235 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LAS----PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccc----ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000 00000001112334445559999999999999887765
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-16 Score=170.93 Aligned_cols=130 Identities=16% Similarity=0.241 Sum_probs=103.7
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEE-cccc-c-------ccHHHHHHHHHHHhcCCCCCC----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKR-LSAC-K-------LGEKQFLLEMKQVGLLKHPNL---------- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~-~~~~-~-------~~~~~~~~E~~~l~~l~H~ni---------- 337 (538)
.....|...+.||+|+||.||+|.+.+.. +++|+ ..+. . ...+++.+|++++..++|+++
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 33445567789999999999999875443 33333 2211 1 112568899999999999987
Q ss_pred -cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
..++||||+++++|.+++. ....++.+++++|.|||+ .+++|||+||+||++ +++.++|+|||++
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 3469999999999999875 356799999999999999 999999999999999 6789999999999
Q ss_pred cccCC
Q 040267 417 RLTNG 421 (538)
Q Consensus 417 ~~~~~ 421 (538)
+....
T Consensus 475 ~~~~~ 479 (535)
T PRK09605 475 KYSDL 479 (535)
T ss_pred ccCCc
Confidence 87543
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.7e-16 Score=167.93 Aligned_cols=163 Identities=20% Similarity=0.250 Sum_probs=127.1
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCC----CCCC----------cc
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK----HPNL----------EK 339 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~----H~ni----------~~ 339 (538)
+.+.....|.+.+.||+|+||.||+|...+|+.||+|.=+..... +|.--.+++.+|+ |.-. ..
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 455566778899999999999999999888999999987654322 1111222333333 1111 44
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-------CCCCeEEEe
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-------EDFDARIMD 412 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-------~~~~~kl~D 412 (538)
++|+||.+.|+|.+++...+ .++|...+.++.|+++-++.||. .+|||+||||.|.+|. ++.-++|+|
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~--~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNK--VMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred eeeeeccccccHHHhhccCC--CCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEEe
Confidence 69999999999999998444 79999999999999999999999 9999999999999994 235589999
Q ss_pred ccCCcccC-------------------------CCCCCccCcccHHHHHHHHHhCC
Q 040267 413 FGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVTGQ 443 (538)
Q Consensus 413 fg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~elltg~ 443 (538)
||.+.-+. ...+...|.|.+..+++-|+.|+
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 99886321 11677888888888888888886
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-15 Score=146.60 Aligned_cols=154 Identities=19% Similarity=0.187 Sum_probs=106.3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee--CCCC--CeEEEeccC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV--DEDF--DARIMDFGF 415 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~~~--~~kl~Dfg~ 415 (538)
|+||.-++. +|++++..+. .+...+.-+..|+++|+.|||. .+|.|||+|+.|||+ |+|. ...|+|||+
T Consensus 319 ylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGC 391 (598)
T KOG4158|consen 319 YLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGC 391 (598)
T ss_pred EEehhcchh-hHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccce
Confidence 578877765 8999987765 5667778889999999999999 999999999999998 4444 468899998
Q ss_pred CcccCCC-----------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHH
Q 040267 416 SRLTNGD-----------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLV 460 (538)
Q Consensus 416 a~~~~~~-----------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 460 (538)
+-.-... .-.|+|.|+.|.+.||+++...||+..... .
T Consensus 392 cLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-----~-- 464 (598)
T KOG4158|consen 392 CLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-----L-- 464 (598)
T ss_pred eeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-----e--
Confidence 7522110 335899999999999999999999852110 0
Q ss_pred HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 461 NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
+....+++.--|.+... .+..++ +++...++.||++||+..-....|
T Consensus 465 ------L~~r~Yqe~qLPalp~~-vpp~~r---qlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 465 ------LDTRTYQESQLPALPSR-VPPVAR---QLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred ------echhhhhhhhCCCCccc-CChHHH---HHHHHHhcCCccccCCccHHHhHH
Confidence 00001111111222111 122333 455589999999999986555443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.9e-15 Score=136.66 Aligned_cols=130 Identities=18% Similarity=0.123 Sum_probs=96.1
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccH---HH----------------------HHHHHHHHhcCCCCCC--
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGE---KQ----------------------FLLEMKQVGLLKHPNL-- 337 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~---~~----------------------~~~E~~~l~~l~H~ni-- 337 (538)
.+.||+|+||.||+|...+++.||||.++...... .. ...|.+.+.++.+..+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 36799999999999998789999999986432111 11 1356666666654432
Q ss_pred -------cccEEEeecCCCCHHH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 338 -------EKPLVYKYMSNGTLYS-LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 338 -------~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
..++||||++++.+.. .+.... .. .+..+++.+++.++.++|. ..+|+|+||||+||+++ ++.++
T Consensus 82 ~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~~~~ 154 (187)
T cd05119 82 PKPIDLNRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DGKVY 154 (187)
T ss_pred CceEecCCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CCcEE
Confidence 3469999999954332 111111 11 5678899999999999997 37899999999999999 89999
Q ss_pred EEeccCCcccCC
Q 040267 410 IMDFGFSRLTNG 421 (538)
Q Consensus 410 l~Dfg~a~~~~~ 421 (538)
++|||.+.....
T Consensus 155 liDfg~a~~~~~ 166 (187)
T cd05119 155 IIDVPQAVEIDH 166 (187)
T ss_pred EEECcccccccC
Confidence 999999976544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.5e-14 Score=137.26 Aligned_cols=125 Identities=18% Similarity=0.231 Sum_probs=100.7
Q ss_pred CCeEe-ecCCceEEEEEeCCCCEEEEEEccccc--------------ccHHHHHHHHHHHhcCCCCCC------------
Q 040267 285 QNVLV-STWTGTTYKAMLLDGSMLAIKRLSACK--------------LGEKQFLLEMKQVGLLKHPNL------------ 337 (538)
Q Consensus 285 ~~~ig-~G~~g~vy~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~H~ni------------ 337 (538)
...|| .|+.|+||++... +..++||.+.... ....++.+|++++.+++|+++
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 36788 8999999999884 7789999885311 123567889999999998886
Q ss_pred -----cccEEEeecCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 338 -----EKPLVYKYMSN-GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 338 -----~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
..++|+||+++ .+|.+++... .++.. .+.+++.+|.+||+ .+|+||||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEEEE
Confidence 11399999997 6999988653 24443 35789999999999 999999999999999998999999
Q ss_pred eccCCcccC
Q 040267 412 DFGFSRLTN 420 (538)
Q Consensus 412 Dfg~a~~~~ 420 (538)
|||.+....
T Consensus 185 Dfg~~~~~~ 193 (239)
T PRK01723 185 DFDRGELRT 193 (239)
T ss_pred ECCCcccCC
Confidence 999987754
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-16 Score=156.24 Aligned_cols=96 Identities=21% Similarity=0.273 Sum_probs=83.8
Q ss_pred cEEEeecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 340 PLVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
|+.|++|...+|.+|+.... ...-++...+.++.|++.|+.| ++.+|+|+||.||+...+..+||.|||+...
T Consensus 332 yI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 332 YIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhheee
Confidence 47899999999999997543 4567889999999999999999 5689999999999999999999999998764
Q ss_pred cCC-----------------------------CCCCccCcccHHHHHHHHHh
Q 040267 419 TNG-----------------------------DASLQKDVHGFGVVLLELVT 441 (538)
Q Consensus 419 ~~~-----------------------------~~~~~~DV~S~Gvvl~ellt 441 (538)
... .|+.|+||||+|++|+|+++
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 321 18899999999999999997
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-16 Score=135.61 Aligned_cols=124 Identities=28% Similarity=0.457 Sum_probs=114.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|.|++|.++ .+|+.++.+.+|+.|++++|+++ .+|.++.+ +++|+.|+++-|++. .+|..||.++.|++||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~iss-l~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISS-LPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhh-chhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 46899999999999 78999999999999999999999 99999998 999999999999998 8999999999999999
Q ss_pred ecCccccC-CCCccccCCccccEEecccccCCCCCCcccccccccccccc
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLAD 184 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~~ 184 (538)
|.+|+++. .+|..|+.+..|+.|+|+.|.|. .+|...+.+++|..++.
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~l 157 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSL 157 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEee
Confidence 99999984 57999999999999999999998 67888888888877754
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.3e-14 Score=123.46 Aligned_cols=124 Identities=19% Similarity=0.128 Sum_probs=102.5
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCC--CC-----------cccEEEeecCCCCH
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHP--NL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~--ni-----------~~~lv~e~~~~gsL 351 (538)
.+.||+|.++.||++...+ ..+++|....... ...+.+|+..+..++|. ++ ..++++||++++.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 4679999999999999754 7899999875433 56788999999999764 33 25799999988776
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
..+ +......++.+++++++++|.....+++|+|++|.||++++.+.+++.|||.+...
T Consensus 81 ~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 543 55677889999999999999854457999999999999999899999999997653
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-12 Score=135.86 Aligned_cols=133 Identities=21% Similarity=0.252 Sum_probs=99.1
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccccc-----------------------------------------H
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG-----------------------------------------E 319 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----------------------------------------~ 319 (538)
.|+ .+.||.|++|.||+|++.+|+.||||+.+..-.. +
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 3689999999999999999999999998643100 0
Q ss_pred HHHHHHHHHHhcCC-----CCCC-----------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHH-HHHHH
Q 040267 320 KQFLLEMKQVGLLK-----HPNL-----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAAR-GLSWL 382 (538)
Q Consensus 320 ~~~~~E~~~l~~l~-----H~ni-----------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-~L~yL 382 (538)
-+|.+|.+.+.+++ ++++ ..++||||++|++|.++...... .. .+.+++..++. .+..+
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQV 273 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHH
Confidence 02445665555552 3444 34699999999999988754221 12 24556666666 46788
Q ss_pred hcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 383 HHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 383 H~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|. .+++|+|+||.||++++++++++.|||++..+..
T Consensus 274 ~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 274 LR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred Hh---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 88 9999999999999999999999999999988754
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.8e-15 Score=151.75 Aligned_cols=157 Identities=22% Similarity=0.237 Sum_probs=129.3
Q ss_pred eEeecCCceEEEEE----eCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCC-CCCC-----------cccEEEeecC
Q 040267 287 VLVSTWTGTTYKAM----LLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK-HPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 287 ~ig~G~~g~vy~~~----~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~e~~~ 347 (538)
++|+|.||.|+.+. .+.|..+|+|.+++.. ........|..++..++ ||.+ ..+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36899999998876 2347789999886532 11224566888888887 8877 3468999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|...+.... .++......+...++-|++.+|+ .+|+|||+|++||+++.+|.+++.|||+++..-.
T Consensus 81 gg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cg 155 (612)
T KOG0603|consen 81 GGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACG 155 (612)
T ss_pred cchhhhccccCC--chHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhccc
Confidence 999998887765 57777888888999999999999 9999999999999999999999999999885322
Q ss_pred -----------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 -----------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 -----------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
....++|.||||++++||+||..||..
T Consensus 156 t~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 156 TYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred chhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence 156789999999999999999999975
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.3e-14 Score=150.23 Aligned_cols=184 Identities=19% Similarity=0.276 Sum_probs=126.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcccEEEeecCCCCHHHHhhc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLYSLLHS 357 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~~lv~e~~~~gsL~~~l~~ 357 (538)
..+|+..+.|..|+||.||..+++ +.+.+|+|.-+. .. +.+- ++.....|.+ | |+-...++.
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq-~l----ilRn--ilt~a~npfv----v------gDc~tllk~ 144 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-NL----ILRN--ILTFAGNPFV----V------GDCATLLKN 144 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccccc-ch----hhhc--cccccCCcce----e------chhhhhccc
Confidence 357888999999999999999965 467888844222 11 1110 2222233322 2 566666665
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------------
Q 040267 358 NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------------- 421 (538)
Q Consensus 358 ~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------------- 421 (538)
.+. ++- +++.+++|||+ .+|+|||+||.|.+|..-|.+|++|||+.+....
T Consensus 145 ~g~--lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~ 211 (1205)
T KOG0606|consen 145 IGP--LPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTH 211 (1205)
T ss_pred CCC--Ccc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHH
Confidence 542 221 22788999999 9999999999999999999999999999873211
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.|...+|.|++|+++||.+.|+.||.++..++.+...+.+.+ .+.+
T Consensus 212 Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i-------~wpE----- 279 (1205)
T KOG0606|consen 212 EFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI-------EWPE----- 279 (1205)
T ss_pred HhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc-------cccc-----
Confidence 188999999999999999999999998766554332111110 0111
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKW 508 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP 508 (538)
..+....+++.++. +.++.+|..|-
T Consensus 280 -~dea~p~Ea~dli~---~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 280 -EDEALPPEAQDLIE---QLLRQNPLCRL 304 (1205)
T ss_pred -cCcCCCHHHHHHHH---HHHHhChHhhc
Confidence 12233456666666 88889999995
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-13 Score=148.25 Aligned_cols=116 Identities=33% Similarity=0.543 Sum_probs=105.5
Q ss_pred CCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEec
Q 040267 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160 (538)
Q Consensus 81 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l 160 (538)
.++.|+|++|.|+|.+|..+.. +++|+.|+|++|+++|.+|..++.+++|+.|+|++|+|+|.+|..+++|++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~-L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISK-LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhC-CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 4788999999999999999988 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccccc----ccccccccccCCCCCCCCCCC
Q 040267 161 AYNCLSGRIPSFFNGA----MKMDMLADSRLGGANLGSKCC 197 (538)
Q Consensus 161 ~~N~l~g~~p~~~~~~----~~l~~~~~~~l~~~~~~~~c~ 197 (538)
++|+|+|.+|..+... ..+.+.+|..+|+.+....|.
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 9999999999887543 346677899999876555664
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-11 Score=128.24 Aligned_cols=132 Identities=20% Similarity=0.179 Sum_probs=89.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccccc---------------------------c--------H---
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKL---------------------------G--------E--- 319 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~---------------------------~--------~--- 319 (538)
-..|+. +.||.|++|.||+|++.+ |+.||||+.++.-. . .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999877 99999999974310 0 0
Q ss_pred ---HHHHHHHHHHhcCC----CC-CC-----------cccEEEeecCCCCHHHHh--hcCCC--CCCCHHHHHHHHHHHH
Q 040267 320 ---KQFLLEMKQVGLLK----HP-NL-----------EKPLVYKYMSNGTLYSLL--HSNGN--TALDWPSRLRIGLGAA 376 (538)
Q Consensus 320 ---~~~~~E~~~l~~l~----H~-ni-----------~~~lv~e~~~~gsL~~~l--~~~~~--~~l~~~~~~~i~~~ia 376 (538)
-+|.+|+..+.+++ +. .+ ..+|||||++|+.+.++- ...+. ..+.......++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 12445555555553 22 22 345999999999998753 22220 012222222233333
Q ss_pred HHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCCcccCC
Q 040267 377 RGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFSRLTNG 421 (538)
Q Consensus 377 ~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~~~~~ 421 (538)
+. .+++|+|+||.||+++.++ ++++.|||++..+..
T Consensus 277 ------f~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ------FR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------Hh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33 8899999999999999888 999999999987754
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.28 E-value=1e-11 Score=112.84 Aligned_cols=134 Identities=13% Similarity=0.123 Sum_probs=97.6
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCCCHHHHh
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNGTLYSLL 355 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~gsL~~~l 355 (538)
+.++.|.++.||++... +..|++|...........+.+|++++..+.+.++ ..++||||+++.++.+.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~- 81 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE- 81 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc-
Confidence 46788999999999874 7789999986543223456789999888865444 25799999999877643
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHH
Q 040267 356 HSNGNTALDWPSRLRIGLGAARGLSWLHHCC--HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFG 433 (538)
Q Consensus 356 ~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~G 433 (538)
. . ....++.+++++|+.||+.. ...++|+|++|.||+++ ++.+++.|||.+.... -.|-+|
T Consensus 82 ---~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~-------~~~Dla 144 (170)
T cd05151 82 ---D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMND-------PLFDLA 144 (170)
T ss_pred ---c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCC-------hHHHHH
Confidence 0 1 11345689999999999822 12359999999999999 6689999999976532 134456
Q ss_pred HHHHH
Q 040267 434 VVLLE 438 (538)
Q Consensus 434 vvl~e 438 (538)
.++.+
T Consensus 145 ~~~~~ 149 (170)
T cd05151 145 NFFSE 149 (170)
T ss_pred HHHHh
Confidence 55543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-13 Score=118.62 Aligned_cols=122 Identities=29% Similarity=0.462 Sum_probs=107.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCC-CCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG-TIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 134 (538)
.++..|++.+|++. .+|.++++++.|+.|+++-|++. .+|..+++ +|.|+.|||++|+++. .+|..|--++.|+.|
T Consensus 56 ~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs-~p~levldltynnl~e~~lpgnff~m~tlral 132 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGS-FPALEVLDLTYNNLNENSLPGNFFYMTTLRAL 132 (264)
T ss_pred hhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCC-CchhhhhhccccccccccCCcchhHHHHHHHH
Confidence 45788999999998 78999999999999999999998 89999988 9999999999999863 578888889999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|+.|.|. .+|+.++++++|+.|.+..|.+- .+|..++.++.|+.+
T Consensus 133 yl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrel 178 (264)
T KOG0617|consen 133 YLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLREL 178 (264)
T ss_pred HhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHH
Confidence 99999998 78999999999999999999887 578887777666544
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.5e-10 Score=106.45 Aligned_cols=129 Identities=15% Similarity=0.097 Sum_probs=94.4
Q ss_pred CeEeecCCceEEEEEeCC-------CCEEEEEEccccc----------------------cc-HHHH----HHHHHHHhc
Q 040267 286 NVLVSTWTGTTYKAMLLD-------GSMLAIKRLSACK----------------------LG-EKQF----LLEMKQVGL 331 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~----------------------~~-~~~~----~~E~~~l~~ 331 (538)
..||.|.-+.||.|.-.+ +..+|||..+... .. .+.+ .+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999998543 4799999874210 00 1122 378999988
Q ss_pred CCCCCC---------cccEEEeecCCCCHHH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCccccCCCCCCe
Q 040267 332 LKHPNL---------EKPLVYKYMSNGTLYS-LLHSNGNTALDWPSRLRIGLGAARGLSWL-HHCCHPPCLHQNISSSVI 400 (538)
Q Consensus 332 l~H~ni---------~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~Dlkp~NI 400 (538)
+...++ ..++||||+.++.+.. .++.. .++..+...+..+++.+|.+| |. .+|+|+|+++.||
T Consensus 83 l~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~~NI 156 (197)
T cd05146 83 MQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSEYNM 156 (197)
T ss_pred HHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHE
Confidence 865444 4569999997654422 22221 245556678889999999999 77 8999999999999
Q ss_pred eeCCCCCeEEEeccCCcccCC
Q 040267 401 LVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 401 ll~~~~~~kl~Dfg~a~~~~~ 421 (538)
+++ ++.++|+|||-+.....
T Consensus 157 L~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 157 LWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred EEE-CCcEEEEECCCceeCCC
Confidence 997 46899999998876653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.8e-12 Score=129.33 Aligned_cols=119 Identities=34% Similarity=0.452 Sum_probs=91.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|||++|+|. ..|..+..-+++-+|+||+|++. .||..++-.+..|-+||||+|++. .+|+.+..|..|++|+
T Consensus 103 ~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLK 179 (1255)
T ss_pred ccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhh
Confidence 45788899999888 77888888888888888888888 888887777888888888888887 7777788888888888
Q ss_pred ecCcccc-------------------------CCCCccccCCccccEEecccccCCCCCCcccccccc
Q 040267 136 LSYNRLS-------------------------GPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178 (538)
Q Consensus 136 ls~N~l~-------------------------g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 178 (538)
||+|.+. ..+|.++.+|.+|..+|+|.|+|. .+|..+.++.+
T Consensus 180 Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~ 246 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRN 246 (1255)
T ss_pred cCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhh
Confidence 8887551 135666777777778888888777 56666544433
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.6e-12 Score=135.73 Aligned_cols=218 Identities=24% Similarity=0.333 Sum_probs=154.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--CCCEEEEEEcccccc---cHHHHHHHHHHHhcCC-CCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLK-HPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~-H~ni-----------~~~lv 342 (538)
..|...+.||+|.|+.|-..... ....+|+|.+..... .......|..+-..+. |+|+ ..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 34566677999999999887743 355677887754332 2344555777777776 9998 45689
Q ss_pred EeecCCCCHHHHh-hcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLL-HSNGNTALDWPSRLRIGLGAARGLSWLH-HCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l-~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 419 (538)
+||..+|++.+.+ +... ...+......+..|+..++.|+| . .++.|+|+||+|.+++..+ ..+++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCCc-cCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999999988 4332 23566778889999999999999 7 9999999999999999999 9999999999865
Q ss_pred CC-C---------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 420 NG-D---------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 420 ~~-~---------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.. . ..+..|+||.|+++.-+++|..|+........ ....|.... ..
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~---~~ 249 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---RYSSWKSNK---GR 249 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---cceeecccc---cc
Confidence 43 1 35678999999999999999999986443321 111221110 00
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. . .............++. +++..+|+.|.+.+++-.
T Consensus 250 ~----~-~~~~~~~~~~~~~~l~---k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 F----T-QLPWNSISDQAHDLLH---KILKENPSNRLSIEELKL 285 (601)
T ss_pred c----c-cCccccCChhhhhccc---ccccCCchhccccccccc
Confidence 0 0 0000112223333444 888899999999887754
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.2e-10 Score=100.25 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=109.1
Q ss_pred CCCeEeecCCceEEEEEeCCCCEEEEEEcccc---------cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 284 AQNVLVSTWTGTTYKAMLLDGSMLAIKRLSAC---------KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
...++-+|+-+.|+++.+ .|+...||.-... +...++..+|++.|.+++--.| .-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456889999999999998 6777777754221 1234668889999998864444 235899
Q ss_pred eecCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---CeEEEeccCCccc
Q 040267 344 KYMSN-GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DARIMDFGFSRLT 419 (538)
Q Consensus 344 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~ 419 (538)
||+++ .++.+++................+..|-+.+.-||. ..|+|+||..+||++..++ .+.+.|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99976 488888876543223333337888999999999999 9999999999999997554 4689999999877
Q ss_pred CCCCCCccCcccH
Q 040267 420 NGDASLQKDVHGF 432 (538)
Q Consensus 420 ~~~~~~~~DV~S~ 432 (538)
...-...+|+|=|
T Consensus 167 ~~~EDKgVDLYVl 179 (229)
T KOG3087|consen 167 RLPEDKGVDLYVL 179 (229)
T ss_pred cCcccccceeeee
Confidence 6666778898833
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.6e-12 Score=128.72 Aligned_cols=135 Identities=23% Similarity=0.254 Sum_probs=100.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc---cCcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH---ELGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~ 132 (538)
.++..|+|++|+|+..-+.+|..|.+|++|+|++|+++ .+-...+..+++|+.|||++|.+++.|-+ .|..|++|+
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 35778888888888766777888888888888888887 66666666688888888888888877654 366788888
Q ss_pred EeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccc--ccccccccccCCCCC
Q 040267 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA--MKMDMLADSRLGGAN 191 (538)
Q Consensus 133 ~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~--~~l~~~~~~~l~~~~ 191 (538)
.|+|.+|++...--.+|.++.+|++|||.+|.+-..-|..|..+ +.|.+-..+.+|.+.
T Consensus 396 kL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 396 KLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQ 456 (873)
T ss_pred heeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEecc
Confidence 88888888884333578888888888888888887777777654 344444555666553
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.4e-10 Score=99.90 Aligned_cols=131 Identities=17% Similarity=0.237 Sum_probs=99.2
Q ss_pred eEeecCCceEEEEEeCCCCEEEEEEccccc---------ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 287 VLVSTWTGTTYKAMLLDGSMLAIKRLSACK---------LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.+++|+-+.+|.+.+. |..+++|.-.+.. ....+..+|++++.+++--.+ ...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5788999999999763 3346666542211 112457789999998864444 334999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCc
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQ 426 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 426 (538)
++..|.+.+... +..++..+-.-+.-||. .+|+|+||.++||++..+. +.++|||++......-..+
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~a 148 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKA 148 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccccccHHhhh
Confidence 998998888754 24667777777888999 9999999999999998764 9999999998776666677
Q ss_pred cCccc
Q 040267 427 KDVHG 431 (538)
Q Consensus 427 ~DV~S 431 (538)
+|+|-
T Consensus 149 VDl~V 153 (204)
T COG3642 149 VDLHV 153 (204)
T ss_pred chHHH
Confidence 88873
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.2e-10 Score=108.28 Aligned_cols=104 Identities=23% Similarity=0.372 Sum_probs=82.9
Q ss_pred cEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 340 PLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++.|||+.|++.++|++.. .+.+....-.+|+-||..||.|||+ |.++|+|+++...-|++..++-+|++--.-..
T Consensus 148 iFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~PpiihgnlTc~tifiq~ngLIkig~~ap~s 226 (458)
T KOG1266|consen 148 IFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS 226 (458)
T ss_pred EEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCccccCCcchhheeecCCceEEecccCccc
Confidence 48999999999999998643 3456777778999999999999998 88999999999999999998888875321110
Q ss_pred ---------------------ccCC------CCCCccCcccHHHHHHHHHhCCC
Q 040267 418 ---------------------LTNG------DASLQKDVHGFGVVLLELVTGQK 444 (538)
Q Consensus 418 ---------------------~~~~------~~~~~~DV~S~Gvvl~elltg~~ 444 (538)
.... ..+.++|||+||+..+||..+..
T Consensus 227 ~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEi 280 (458)
T KOG1266|consen 227 THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEI 280 (458)
T ss_pred cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhee
Confidence 0000 15668999999999999988764
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-11 Score=125.78 Aligned_cols=114 Identities=25% Similarity=0.162 Sum_probs=88.7
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
++..|+|+.|+++..-...+-+|+.|+.|+||+|.+...-++.+.- .++|++|||++|+++..-+..|..|..|++|+|
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf-tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnL 348 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF-TQKLKELDLSSNRITRLDEGSFRVLSQLEELNL 348 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh-cccceeEeccccccccCChhHHHHHHHhhhhcc
Confidence 5788888888888666777888888888999988888666666554 788889999999888655667777788888888
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~ 171 (538)
++|.++-.--..|..+++|+.|||++|.|++.|-+
T Consensus 349 s~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred cccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 88888755556677777888888888877776654
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.9e-11 Score=114.96 Aligned_cols=120 Identities=28% Similarity=0.380 Sum_probs=91.4
Q ss_pred EEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeec
Q 040267 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls 137 (538)
++.+.+++|.++ .+|..++.+++|+.|+|++|-+. .+|.+++. +..|+.||+|.|+|. .+|..+..+..|+++-.+
T Consensus 414 vT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~-lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas 489 (565)
T KOG0472|consen 414 VTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGS-LVRLQTLNLSFNRFR-MLPECLYELQTLETLLAS 489 (565)
T ss_pred HHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhh-hhhhheecccccccc-cchHHHhhHHHHHHHHhc
Confidence 456677666665 78888888999999999988888 88988887 788999999999887 778777777777777777
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++...-|..+.+|.+|..|||.+|.+. .+|..+++++++..+
T Consensus 490 ~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hL 533 (565)
T KOG0472|consen 490 NNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHL 533 (565)
T ss_pred cccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEE
Confidence 77777444445777777888888888777 566667766665544
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-09 Score=101.96 Aligned_cols=131 Identities=18% Similarity=0.180 Sum_probs=102.6
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC----------c------ccEEEeecC
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL----------E------KPLVYKYMS 347 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni----------~------~~lv~e~~~ 347 (538)
+.|+.|..+.||++...+|..+++|....... ....+..|++++..+++.++ . .++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46889999999999987778999999865432 34578899999999865332 1 269999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC----------------------------------------- 386 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------------- 386 (538)
+.++.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888776542 14777888888999999999998521
Q ss_pred ------------CCCccccCCCCCCeeeCC--CCCeEEEeccCCccc
Q 040267 387 ------------HPPCLHQNISSSVILVDE--DFDARIMDFGFSRLT 419 (538)
Q Consensus 387 ------------~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~ 419 (538)
...++|+|+.|.||+++. ++.+.|.||+.+...
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 245799999999999998 566899999987653
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.8e-11 Score=117.16 Aligned_cols=117 Identities=33% Similarity=0.465 Sum_probs=60.3
Q ss_pred EEEEEcCCCCccccCcccccCCCCCCe-EEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 58 ILSLELEEMNLSGQVPESLQSCKSLQV-LNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~~L~~-L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
|+.++++.|++. .+|..+..++.+++ +.+++|.++ .+|..+++ +++|..|+|++|-+. .+|.+++.+..|+.||+
T Consensus 390 Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~-l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~Lnl 465 (565)
T KOG0472|consen 390 VTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQ-LQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNL 465 (565)
T ss_pred eEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHh-hhcceeeecccchhh-hcchhhhhhhhhheecc
Confidence 555555555555 45555554444433 333333333 55555555 555555555555554 55555555555555555
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
|.|+|. .+|..+..+..|+.+-.++|++....|+.+.++.+|
T Consensus 466 S~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL 507 (565)
T KOG0472|consen 466 SFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNL 507 (565)
T ss_pred cccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhc
Confidence 555555 455555544445555555555554333334444433
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-10 Score=119.79 Aligned_cols=108 Identities=35% Similarity=0.463 Sum_probs=93.6
Q ss_pred CCEEEEEcCCCCcc-ccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCCcE
Q 040267 56 NRILSLELEEMNLS-GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNT 133 (538)
Q Consensus 56 ~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 133 (538)
+++.++.+..|+|. .-+|+.+-.+..|+.||||+|+|. ..|..+-. .+++.+|+||+|++. +||.. +-+|+.|-.
T Consensus 78 p~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~-AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 78 PRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEY-AKNSIVLNLSYNNIE-TIPNSLFINLTDLLF 154 (1255)
T ss_pred hhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhh-hcCcEEEEcccCccc-cCCchHHHhhHhHhh
Confidence 35677788888884 357888999999999999999999 99999877 899999999999998 77764 568999999
Q ss_pred eeecCccccCCCCccccCCccccEEecccccCCC
Q 040267 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 134 L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
||||+|++. .+|+.+..|..|+.|.|++|.|..
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~h 187 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNH 187 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhH
Confidence 999999999 799999999999999999998753
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.5e-11 Score=125.61 Aligned_cols=125 Identities=30% Similarity=0.388 Sum_probs=88.4
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.|+.|.|.+|.|+...-+.|.+++.|+.|+|++|+|. .+|+...+.+..|+.|+||+|.++ .+|..+.++..|++|..
T Consensus 360 ~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 4677778888887777777777888888888888876 777776666777888888888887 77777777777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCC-CCccc--cccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR-IPSFF--NGAMKMDMLADS 185 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~-~p~~~--~~~~~l~~~~~~ 185 (538)
.+|++. .+| .+..+++|+.+|+|.|+|+.. +|... .++.-|++.||.
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 777777 566 677777777777777777543 33222 234444444554
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.91 E-value=1e-09 Score=99.06 Aligned_cols=121 Identities=32% Similarity=0.422 Sum_probs=45.0
Q ss_pred CEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccC-cCCCCCcEe
Q 040267 57 RILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL-GNCVYLNTL 134 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L 134 (538)
+++.|+|.+|.++. +. .++ .+++|+.|+||+|.++ .++. +.. +++|+.|++++|+++ .++..+ ..+++|+.|
T Consensus 20 ~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~~-l~~-L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 20 KLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLEG-LPG-LPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---TT------TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred cccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-cccC-ccC-hhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 46888888888873 33 455 5788888999999888 5653 444 888889999999888 555444 358888889
Q ss_pred eecCccccCCC-CccccCCccccEEecccccCCCCCCc----ccccccccccccc
Q 040267 135 YLSYNRLSGPL-PPQLSSLVRLKQFSVAYNCLSGRIPS----FFNGAMKMDMLAD 184 (538)
Q Consensus 135 ~ls~N~l~g~~-p~~l~~l~~L~~l~l~~N~l~g~~p~----~~~~~~~l~~~~~ 184 (538)
+|++|++...- =..+..+++|+.|++.+|.++.. +. .+..+++|..++.
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 99988887421 14566788888888888887643 21 1234455555544
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.2e-08 Score=97.28 Aligned_cols=130 Identities=12% Similarity=0.042 Sum_probs=96.9
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEccccc------------ccHHHHHHHHHHHhcCCCCCC----------------
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACK------------LGEKQFLLEMKQVGLLKHPNL---------------- 337 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~------------~~~~~~~~E~~~l~~l~H~ni---------------- 337 (538)
+.+-+-....|++..+ +|+.+.||+..... .....+.+|.+.+.++...+|
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444455777766 67789999774322 111247789988888865454
Q ss_pred --cccEEEeecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-------CCC
Q 040267 338 --EKPLVYKYMSNG-TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-------DFD 407 (538)
Q Consensus 338 --~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-------~~~ 407 (538)
..++|+|++++- +|.+++........+...+..++.+++..+.-||. .+|+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCce
Confidence 146999999886 89999864222245667788999999999999999 99999999999999985 468
Q ss_pred eEEEeccCCccc
Q 040267 408 ARIMDFGFSRLT 419 (538)
Q Consensus 408 ~kl~Dfg~a~~~ 419 (538)
+.++||+.+...
T Consensus 184 ~~LIDl~r~~~~ 195 (268)
T PRK15123 184 LSVIDLHRAQIR 195 (268)
T ss_pred EEEEECCccccc
Confidence 999999998653
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.1e-09 Score=109.83 Aligned_cols=218 Identities=17% Similarity=0.152 Sum_probs=148.7
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEe--CCCCEEEEEEccccccc---HHHHHHHHHHHhcC-CCCCC-----------
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAML--LDGSMLAIKRLSACKLG---EKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
....+.+|.....||.|.|+.||+... .++..+++|.+...-.. +..-..|+-+...+ .|.++
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 445567889999999999999999874 45889999988653211 11122344443333 13332
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFS 416 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 416 (538)
..|+-.|||+++++.....-. ..++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..+++|||.+
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccc
Confidence 446888999999887766332 257888999999999999999999 999999999999999876 78899999988
Q ss_pred cccC----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTN----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
..+. ..+..+.|+||||..+.|.+++..--... ..|.. +..+..
T Consensus 415 t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~----------~~~~~--i~~~~~-- 480 (524)
T KOG0601|consen 415 TRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG----------VQSLT--IRSGDT-- 480 (524)
T ss_pred cccceecccccccccccccchhhccccccccccccccccccccccccCcccCccc----------cccee--eecccc--
Confidence 5211 01567899999999999999986432210 11110 111110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 519 (538)
+. ......+... ++.....+++..||.+.+.....+.
T Consensus 481 ---p~--~~~~~~~~q~---~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 481 ---PN--LPGLKLQLQV---LLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ---cC--CCchHHhhhh---hhhhhcCCccccchhhhhhcccchh
Confidence 11 1111233333 4448888999999999887665443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.6e-09 Score=109.38 Aligned_cols=211 Identities=18% Similarity=0.198 Sum_probs=144.4
Q ss_pred CCCCCeEee--cCCceEEEEEe---CCCCEEEEEEcccc---cccHHHHHHHHHHHhcCC-CCCC-----------cccE
Q 040267 282 FSAQNVLVS--TWTGTTYKAML---LDGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLK-HPNL-----------EKPL 341 (538)
Q Consensus 282 f~~~~~ig~--G~~g~vy~~~~---~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-H~ni-----------~~~l 341 (538)
|...+.+|. |.+|.+|.+.. .++..+|+|+-+.. ......=.+|+....+++ |+|. ..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 455677899 99999999986 35788999984321 122233345666666663 7776 4467
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAAR----GLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 416 (538)
-+|++. .+|.++.+.... .++....+.+..+... ||..+|. ..++|-|+||.||++..+ ...+++|||+.
T Consensus 196 qtE~~~-~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 196 QTELCG-ESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eecccc-chhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCccee
Confidence 788885 688888876542 3566667777777777 9999999 999999999999999999 88999999988
Q ss_pred cccCCC---------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 417 RLTNGD---------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 417 ~~~~~~---------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
..++.. ++.++|+|++|.+.+|..++..+.... ....|.+ .+.
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g--------~~~~W~~--~r~ 340 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVG--------KNSSWSQ--LRQ 340 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCC--------CCCCccc--ccc
Confidence 765432 778899999999999999987665431 0011211 000
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.. +..++...-..++-.....+++.+|-.|++.+++..
T Consensus 341 ~~--------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 341 GY--------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cc--------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 00 111111111112222555899999999999877654
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=92.92 Aligned_cols=119 Identities=21% Similarity=0.228 Sum_probs=82.1
Q ss_pred eEEEEEeCCCCEEEEEEccccc--------------c-------------cHHHHHHHHHHHhcCCCCCC---------c
Q 040267 295 TTYKAMLLDGSMLAIKRLSACK--------------L-------------GEKQFLLEMKQVGLLKHPNL---------E 338 (538)
Q Consensus 295 ~vy~~~~~~~~~vavK~~~~~~--------------~-------------~~~~~~~E~~~l~~l~H~ni---------~ 338 (538)
.||.|.-.+|..+|+|..+... . ......+|.+.|.++..-++ .
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 4899998899999999874310 0 01346789999999986654 4
Q ss_pred ccEEEeecC--CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 KPLVYKYMS--NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSW-LHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 ~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~y-LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
..+||||++ +..+..+... . ++......++.+++..+.. +|. .+|+|+|+.+.||+++++ .+.++|||.
T Consensus 81 ~~ivME~I~~~G~~~~~l~~~-~---~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 81 NVIVMEYIGEDGVPLPRLKDV-D---LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp TEEEEE--EETTEEGGCHHHC-G---GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred CEEEEEecCCCccchhhHHhc-c---ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEEecCc
Confidence 469999998 5455443332 1 2244566788888886666 467 899999999999999988 999999998
Q ss_pred CcccCC
Q 040267 416 SRLTNG 421 (538)
Q Consensus 416 a~~~~~ 421 (538)
+.....
T Consensus 153 av~~~~ 158 (188)
T PF01163_consen 153 AVDSSH 158 (188)
T ss_dssp EEETTS
T ss_pred ceecCC
Confidence 876543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-09 Score=116.14 Aligned_cols=64 Identities=33% Similarity=0.309 Sum_probs=34.4
Q ss_pred CCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccc
Q 040267 106 YLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178 (538)
Q Consensus 106 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 178 (538)
+|+.|+|++|+|+ .+|.. .++|+.|++++|+|++ +|... .+|+.|++++|+|+ .+|..+.++.+
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~ 446 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSS 446 (788)
T ss_pred ccceEEecCCccc-CCCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccC
Confidence 4566666666665 34432 2456666666666663 55422 34555666666665 45555444443
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.8e-09 Score=79.00 Aligned_cols=60 Identities=40% Similarity=0.473 Sum_probs=35.1
Q ss_pred CCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccC
Q 040267 106 YLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165 (538)
Q Consensus 106 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l 165 (538)
+|++|++++|+++...+..|..+++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455666666666533334555666666666666666644455566666666666666653
|
... |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.7e-09 Score=79.08 Aligned_cols=61 Identities=41% Similarity=0.530 Sum_probs=38.7
Q ss_pred CCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccc
Q 040267 80 KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRL 141 (538)
Q Consensus 80 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 141 (538)
++|+.|+|++|+|+ .+|...+..+++|++|++++|.++..-|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 35666666666666 55555444466666677766666655555666667777777766654
|
... |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.3e-08 Score=112.10 Aligned_cols=98 Identities=32% Similarity=0.454 Sum_probs=61.7
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+ .++|+.|+|++|++. .+|..+. .+|+.|+|
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l---~~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 200 QITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATL---PDTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred CCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhh---hccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 4666666666666 3454432 46777777777776 566544 235666777777666 5665543 46777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCC
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
++|+|+ .+|..+. ++|+.|++++|+|++
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCcccc
Confidence 777777 4666553 367777777777764
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1e-09 Score=107.18 Aligned_cols=143 Identities=24% Similarity=0.342 Sum_probs=112.7
Q ss_pred cccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcc-cCCCC
Q 040267 48 VSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLS-NNDLS 118 (538)
Q Consensus 48 v~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls-~N~l~ 118 (538)
|.|+.. .+...+.|+|..|+|+-..|.+|+.+++|+.||||+|+|+ .|-+..+.++++|..|-+. +|+|+
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg~NkI~ 129 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYGNNKIT 129 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhcCCchh
Confidence 788752 2456799999999999888889999999999999999999 5555555668888766554 49998
Q ss_pred CCCC-ccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccc---cccccccCCCCCC
Q 040267 119 GTIP-HELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM---DMLADSRLGGANL 192 (538)
Q Consensus 119 g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l---~~~~~~~l~~~~~ 192 (538)
.+| ..|+.|.+|+.|.+.-|++.-.....|..|++|..|.+-.|.+...--..|..+..+ ....|++.|.+.+
T Consensus 130 -~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 130 -DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred -hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 555 468999999999999999997778899999999999999999984333356555443 4456777776554
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.7e-09 Score=105.57 Aligned_cols=87 Identities=24% Similarity=0.309 Sum_probs=55.3
Q ss_pred CCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccc---cccc
Q 040267 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA---MKMD 180 (538)
Q Consensus 104 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~---~~l~ 180 (538)
+++|+.|+|++|.+++.-+.+|..+..++.|.|..|+|.-.--..|.++..|+.|+|.+|+|+..-|.+|..+ ..+.
T Consensus 273 L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~ 352 (498)
T KOG4237|consen 273 LPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLN 352 (498)
T ss_pred cccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeee
Confidence 4556666666666665555566666666666666666654344456677777888888888877777666543 3455
Q ss_pred ccccccCCCC
Q 040267 181 MLADSRLGGA 190 (538)
Q Consensus 181 ~~~~~~l~~~ 190 (538)
.++|++.|.+
T Consensus 353 l~~Np~~CnC 362 (498)
T KOG4237|consen 353 LLSNPFNCNC 362 (498)
T ss_pred hccCcccCcc
Confidence 6677766654
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.3e-09 Score=114.95 Aligned_cols=104 Identities=32% Similarity=0.393 Sum_probs=92.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.++..|+|++|+|.......+.++..|+.|+||+|.|+ .+|..+.. ++.|++|...+|++. .+| ++..++.|+.+|
T Consensus 383 ~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~-~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lD 458 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVAN-LGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLD 458 (1081)
T ss_pred cceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHh-hhhhHHHhhcCCcee-ech-hhhhcCcceEEe
Confidence 57999999999998555567889999999999999999 99999887 999999999999998 888 899999999999
Q ss_pred ecCccccC-CCCccccCCccccEEeccccc
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~ 164 (538)
||.|+|+- .+|..... ++|++|||++|.
T Consensus 459 lS~N~L~~~~l~~~~p~-p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 459 LSCNNLSEVTLPEALPS-PNLKYLDLSGNT 487 (1081)
T ss_pred cccchhhhhhhhhhCCC-cccceeeccCCc
Confidence 99999984 44554443 899999999996
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.71 E-value=9.3e-10 Score=112.06 Aligned_cols=117 Identities=31% Similarity=0.502 Sum_probs=76.2
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.|||+.|+++ .+|..++.|+ |+.|.+++|+++ .+|.+++ .++.|..||.+.|++. .+|..++.+.+|+.|++
T Consensus 122 ~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig-~~~tl~~ld~s~nei~-slpsql~~l~slr~l~v 196 (722)
T KOG0532|consen 122 ALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIG-LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNV 196 (722)
T ss_pred HHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccc-cchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHH
Confidence 4566777777776 5666666554 667777777776 6666666 3666777777777766 66666666666666666
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
..|++. .+|+.+..|+ |..||+|.|+++ .||..|..+..|..
T Consensus 197 rRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~ 238 (722)
T KOG0532|consen 197 RRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQV 238 (722)
T ss_pred hhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhhee
Confidence 666666 4566666443 666777777776 56666666665554
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=2e-07 Score=97.64 Aligned_cols=135 Identities=19% Similarity=0.215 Sum_probs=105.0
Q ss_pred eCCCCEEEEEEccccccc-HHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCHHHHhhcCCCCCCCHHHH
Q 040267 301 LLDGSMLAIKRLSACKLG-EKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSR 368 (538)
Q Consensus 301 ~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~ 368 (538)
..++.+|.|...+..... .....+-++.|+.+||||| ..|+|+|-+. .|..++++.+ ....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-----~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-----KEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----HHHH
Confidence 456888888888754432 2446778899999999999 4479999884 6777777543 4555
Q ss_pred HHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-------------C--------CCcc
Q 040267 369 LRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-------------A--------SLQK 427 (538)
Q Consensus 369 ~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-------------~--------~~~~ 427 (538)
...+.||+.||.|||+. .+++|++|.-..|++++.|+.||++|..+....+. . +...
T Consensus 107 ~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~ 184 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWSI 184 (690)
T ss_pred HHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccch
Confidence 66789999999999973 67999999999999999999999999876433221 1 1124
Q ss_pred CcccHHHHHHHHHhCCC
Q 040267 428 DVHGFGVVLLELVTGQK 444 (538)
Q Consensus 428 DV~S~Gvvl~elltg~~ 444 (538)
|.|-||++++|++.|..
T Consensus 185 D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNGSL 201 (690)
T ss_pred hhhhHHHHHHHHhCccc
Confidence 99999999999999943
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-08 Score=90.95 Aligned_cols=87 Identities=32% Similarity=0.371 Sum_probs=30.1
Q ss_pred ccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccc-cCCcc
Q 040267 76 LQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQL-SSLVR 154 (538)
Q Consensus 76 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l-~~l~~ 154 (538)
+.+...++.|+|++|.++ .|. .+...+.+|+.|||++|.++ .++ .+..++.|++|++++|+++ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 456668899999999998 564 45534789999999999998 554 5888999999999999999 465555 46899
Q ss_pred ccEEecccccCCC
Q 040267 155 LKQFSVAYNCLSG 167 (538)
Q Consensus 155 L~~l~l~~N~l~g 167 (538)
|+.|++++|++..
T Consensus 90 L~~L~L~~N~I~~ 102 (175)
T PF14580_consen 90 LQELYLSNNKISD 102 (175)
T ss_dssp --EEE-TTS---S
T ss_pred CCEEECcCCcCCC
Confidence 9999999999975
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.4e-08 Score=106.83 Aligned_cols=17 Identities=35% Similarity=0.604 Sum_probs=10.2
Q ss_pred CCcEEEcccCCCCCCCCc
Q 040267 106 YLVSLDLSNNDLSGTIPH 123 (538)
Q Consensus 106 ~L~~L~Ls~N~l~g~~p~ 123 (538)
+|++|+|++|+|+ .+|.
T Consensus 343 ~Lq~LdLS~N~Ls-~LP~ 359 (788)
T PRK15387 343 GLQELSVSDNQLA-SLPT 359 (788)
T ss_pred ccceEecCCCccC-CCCC
Confidence 5666666666666 3443
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=8.8e-08 Score=105.66 Aligned_cols=115 Identities=24% Similarity=0.399 Sum_probs=91.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+.+.|+|++++|+ .+|..+. ++|+.|+|++|+|+ .+|..+ .++|+.|+|++|+|+ .+|..+. .+|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l---~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENL---QGNIKTLYANSNQLT-SIPATLP--DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhh---ccCCCEEECCCCccc-cCChhhh--ccccEEE
Confidence 45789999999999 5676553 58999999999999 788876 468999999999998 6787654 4799999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccc-ccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF-NGAMKMDMLAD 184 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~-~~~~~l~~~~~ 184 (538)
|++|+++ .+|..+. .+|+.|++++|+|+. +|..+ .++..|.+.+|
T Consensus 248 Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~~sL~~L~Ls~N 293 (754)
T PRK15370 248 LSINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLPEELRYLSVYDN 293 (754)
T ss_pred CcCCccC-cCChhHh--CCCCEEECcCCccCc-cccccCCCCcEEECCCC
Confidence 9999999 7888775 589999999999994 66543 34444444333
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.8e-07 Score=90.18 Aligned_cols=150 Identities=27% Similarity=0.320 Sum_probs=119.0
Q ss_pred CCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCcc---------------cEEEeecCC-CCHHH
Q 040267 292 WTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLEK---------------PLVYKYMSN-GTLYS 353 (538)
Q Consensus 292 ~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~~---------------~lv~e~~~~-gsL~~ 353 (538)
...+.||+. ..||..|++|+++..+ ........-+++++++.|.|++. ++||+|.|+ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346789998 4589999999995433 12223345678999999999932 489999986 57877
Q ss_pred HhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 354 LLHSNG-------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 354 ~l~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+-.... +...++...+.++.|+..||.++|+ .|+.-+-|.|.+|+++.+.+++|+..|+...+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 653321 2346788999999999999999999 898889999999999999999999988887766
Q ss_pred CCC------CCccCcccHHHHHHHHHhCCC
Q 040267 421 GDA------SLQKDVHGFGVVLLELVTGQK 444 (538)
Q Consensus 421 ~~~------~~~~DV~S~Gvvl~elltg~~ 444 (538)
.+. -++-|.=.||.+++-|.||..
T Consensus 445 ~d~~~~le~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPTEPLESQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCCcchhHHhhhhHHHHHHHHHHHhhccc
Confidence 543 346799999999999999954
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-07 Score=110.31 Aligned_cols=121 Identities=18% Similarity=0.231 Sum_probs=78.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++. .++..+..+++|+.|+|++|...+.+|. +.. +++|+.|+|++|.....+|..++++++|+.|+
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~-l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSM-ATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-ccc-CCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 45677777777766 4666666777777777776654456664 444 67777777777665567777777777777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+++|..-+.+|..+ ++++|+.|++++|...+.+|....++..|.
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~ 731 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLD 731 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeee
Confidence 77755445666654 567777777777765555555444444443
|
syringae 6; Provisional |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=8.5e-07 Score=81.94 Aligned_cols=128 Identities=16% Similarity=0.113 Sum_probs=101.0
Q ss_pred EeecCCceEEEEEeCCCCEEEEEEccc----c---cccHHHHHHHHHHHhcCCCCCC-----------------cccEEE
Q 040267 288 LVSTWTGTTYKAMLLDGSMLAIKRLSA----C---KLGEKQFLLEMKQVGLLKHPNL-----------------EKPLVY 343 (538)
Q Consensus 288 ig~G~~g~vy~~~~~~~~~vavK~~~~----~---~~~~~~~~~E~~~l~~l~H~ni-----------------~~~lv~ 343 (538)
-|+|+.+-|++-.+ +|..+-+|+-.. + ......|.+|...+.++...++ ..+||+
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 46677778888777 445788888751 1 2345789999999999976665 235899
Q ss_pred eecCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--eEEEeccCCccc
Q 040267 344 KYMSN-GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--ARIMDFGFSRLT 419 (538)
Q Consensus 344 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~ 419 (538)
|-+++ -+|.+++....-...+...+..+..++++.++-||+ .++.|+|+.+.||+++.++. ++++||.-++..
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 97763 489999876543456778889999999999999999 99999999999999986666 999999876643
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.2e-08 Score=96.38 Aligned_cols=102 Identities=27% Similarity=0.314 Sum_probs=74.4
Q ss_pred EEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeec
Q 040267 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls 137 (538)
++.|||++|.++ .+..+..-++.++.|++|+|++. .+-. +.. +++|+.||||+|.++ .+-.+-..|.+.++|.|+
T Consensus 286 LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~-L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 286 LTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAE-LPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhh-cccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 677888888877 67777777788888888888887 4443 444 788888888888887 555555667777888888
Q ss_pred CccccCCCCccccCCccccEEecccccCC
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~ 166 (538)
+|.+.. + ..+..|-+|.+||+++|++.
T Consensus 361 ~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 361 QNKIET-L-SGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhhHhh-h-hhhHhhhhheeccccccchh
Confidence 887752 2 23666677888888888775
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.1e-08 Score=102.95 Aligned_cols=112 Identities=26% Similarity=0.288 Sum_probs=71.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCC---CCeEEccCCcCCC----cCChhHhhcC-CCCcEEEcccCCCCCC----CCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKS---LQVLNLSTNNLFG----KIPTQLCKWF-PYLVSLDLSNNDLSGT----IPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~---L~~L~Ls~N~l~g----~ip~~~~~~l-~~L~~L~Ls~N~l~g~----~p~ 123 (538)
.+++.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+.. + ++|+.|+|++|.+++. ++.
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~-~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKD-LPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHh-CCCCceEEEcCCCcCCchHHHHHHH
Confidence 46777777777777655655555544 7777777777763 22233333 4 6777777777777743 233
Q ss_pred cCcCCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCCC
Q 040267 124 ELGNCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 124 ~~~~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
.+..+.+|++|+|++|.+++. ++..+..+++|+.|++++|.+++.
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 208 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDE 208 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChH
Confidence 455666777777777777742 333455556777777777777643
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.8e-07 Score=85.54 Aligned_cols=127 Identities=19% Similarity=0.143 Sum_probs=90.0
Q ss_pred CCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-----------------------ccHHHHHHHHHHHhcCCCC--CC
Q 040267 283 SAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-----------------------LGEKQFLLEMKQVGLLKHP--NL 337 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-----------------------~~~~~~~~E~~~l~~l~H~--ni 337 (538)
..++.||.|.-+.||.|..+.|.++|||.=+... .++....+|.+.|.++.-. .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 3457899999999999999999999999642110 1123467899999998654 23
Q ss_pred -------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 338 -------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 338 -------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
...+||||+++-.|...- ++....-.++..|+.-+.-.-. .||||+|+.+-||+++++|.+.+
T Consensus 174 P~P~~~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg~~~v 243 (304)
T COG0478 174 PKPIAWNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDGDIVV 243 (304)
T ss_pred CCccccccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCCCEEE
Confidence 346999999986665432 1122233444444444444445 89999999999999999999999
Q ss_pred EeccCCccc
Q 040267 411 MDFGFSRLT 419 (538)
Q Consensus 411 ~Dfg~a~~~ 419 (538)
+||--+...
T Consensus 244 IDwPQ~v~~ 252 (304)
T COG0478 244 IDWPQAVPI 252 (304)
T ss_pred EeCcccccC
Confidence 999554443
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.7e-07 Score=109.95 Aligned_cols=119 Identities=21% Similarity=0.267 Sum_probs=94.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|...+.+|.+++++++|+.|+|++|...+.+|..+ . +++|+.|+|++|.....+|.. .++|+.|+
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~-L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~ 852 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-N-LESLESLDLSGCSRLRTFPDI---STNISDLN 852 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-C-ccccCEEECCCCCcccccccc---ccccCEeE
Confidence 468889999998888899999999999999999876555888775 4 889999999998765566653 36789999
Q ss_pred ecCccccCCCCccccCCccccEEeccc-ccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAY-NCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~-N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.++ .+|.++..+++|+.|++++ |+|. .+|.....++.|..
T Consensus 853 Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~ 897 (1153)
T PLN03210 853 LSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLET 897 (1153)
T ss_pred CCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCe
Confidence 9999998 6899999999999999998 4555 46655555554443
|
syringae 6; Provisional |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.9e-09 Score=88.00 Aligned_cols=129 Identities=26% Similarity=0.413 Sum_probs=99.7
Q ss_pred CCEEEEEcCCCCccccCccc---ccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPES---LQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~---~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 132 (538)
..+..++|+++.|- .++.. +.....|+..+|++|.|. .+|..+...++.++.|+|++|.++ .+|.++..++.|+
T Consensus 27 kE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr 103 (177)
T KOG4579|consen 27 KELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALR 103 (177)
T ss_pred HHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhh
Confidence 34567888888775 45544 445566777799999998 888888876778999999999998 8999999999999
Q ss_pred EeeecCccccCCCCccccCCccccEEecccccCCCCCCcc--ccccccccccccccCCC
Q 040267 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF--FNGAMKMDMLADSRLGG 189 (538)
Q Consensus 133 ~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~~~~l~~ 189 (538)
.|+++.|.|. ..|.-+..|.+|..|+..+|.+. ++|.. ......+.-++|..+.+
T Consensus 104 ~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 104 SLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred hcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccc
Confidence 9999999999 68888888999999999999887 44532 23344455556655544
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.8e-08 Score=101.48 Aligned_cols=108 Identities=27% Similarity=0.405 Sum_probs=98.7
Q ss_pred EEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeec
Q 040267 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls 137 (538)
+..|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++. +.+|+.|++..|++. .+|.++.. -.|..||+|
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~-l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfS 219 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGY-LTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFS 219 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhh-HHHHHHHHHhhhhhh-hCCHHHhC-Cceeeeecc
Confidence 678889999998 88999999999999999999998 89999998 999999999999998 88999984 469999999
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF 172 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~ 172 (538)
.|+++ .+|-.|.+|+.|++|.|.+|.|.. .|..
T Consensus 220 cNkis-~iPv~fr~m~~Lq~l~LenNPLqS-PPAq 252 (722)
T KOG0532|consen 220 CNKIS-YLPVDFRKMRHLQVLQLENNPLQS-PPAQ 252 (722)
T ss_pred cCcee-ecchhhhhhhhheeeeeccCCCCC-ChHH
Confidence 99999 899999999999999999999995 4543
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.8e-07 Score=63.66 Aligned_cols=40 Identities=40% Similarity=0.725 Sum_probs=28.8
Q ss_pred hhhHHHHHHhh-cCC-CCCCCCCCCCCCCCCCCCCCcccccccC
Q 040267 10 EDDVKCLAGIK-SFN-DPQGKLSSWSLTNSSVGFICRFNGVSCW 51 (538)
Q Consensus 10 ~~~~~~l~~~~-~~~-~~~~~l~~W~~~~~~~~~~c~w~gv~C~ 51 (538)
++|+.+|+.|| ++. +|.+.+.+|+.+. ..+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~--~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSS--DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT----S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcC--CCCCeeeccEEeC
Confidence 57899999999 887 5778899998753 2579999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.1e-08 Score=97.50 Aligned_cols=111 Identities=26% Similarity=0.316 Sum_probs=87.3
Q ss_pred CCEEEEEcCCCCccc----cCcccccCC-CCCCeEEccCCcCCCcCCh----hHhhcCCCCcEEEcccCCCCCC----CC
Q 040267 56 NRILSLELEEMNLSG----QVPESLQSC-KSLQVLNLSTNNLFGKIPT----QLCKWFPYLVSLDLSNNDLSGT----IP 122 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g----~~p~~~~~l-~~L~~L~Ls~N~l~g~ip~----~~~~~l~~L~~L~Ls~N~l~g~----~p 122 (538)
.+++.|++++|++++ .+...+..+ ++|+.|+|++|.+++..+. .+.. +++|+.|+|++|.+++. ++
T Consensus 108 ~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~l~ 186 (319)
T cd00116 108 SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRA-NRDLKELNLANNGIGDAGIRALA 186 (319)
T ss_pred CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHh-CCCcCEEECcCCCCchHHHHHHH
Confidence 359999999999984 344556677 8999999999999964333 3333 67899999999999853 34
Q ss_pred ccCcCCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCC
Q 040267 123 HELGNCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 187 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 187 EGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 4566678999999999999743 34556778899999999999986
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.1e-05 Score=85.27 Aligned_cols=129 Identities=18% Similarity=0.260 Sum_probs=87.8
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccccH-----------------------------------------HHHHH
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGE-----------------------------------------KQFLL 324 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~-----------------------------------------~~~~~ 324 (538)
+.|+.++-|.||+|++.+|+.||||+.+..-... -++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6799999999999999999999999986421100 01333
Q ss_pred HHHHHhcCC-----CCCC-----------cccEEEeecCCCCHHHHh--hcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 040267 325 EMKQVGLLK-----HPNL-----------EKPLVYKYMSNGTLYSLL--HSNGNTALDWPSRLRIGLGAARGLSWLHHCC 386 (538)
Q Consensus 325 E~~~l~~l~-----H~ni-----------~~~lv~e~~~~gsL~~~l--~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~ 386 (538)
|...+.+++ .+++ .+.|+|||++|-.+.+.. +..+ .+ +..++..++++ |+-+-.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g---~d---~k~ia~~~~~~--f~~q~~ 282 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG---ID---RKELAELLVRA--FLRQLL 282 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC---CC---HHHHHHHHHHH--HHHHHH
Confidence 444444432 2222 345999999998888874 4432 44 23333333332 121111
Q ss_pred CCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 387 HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 387 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
..++.|.|..|.||+++.++++.+.|||+...+.+.
T Consensus 283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred hcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 268999999999999999999999999999887654
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.7e-08 Score=91.85 Aligned_cols=121 Identities=23% Similarity=0.219 Sum_probs=95.0
Q ss_pred cccccccCCC---CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC
Q 040267 44 RFNGVSCWNG---LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT 120 (538)
Q Consensus 44 ~w~gv~C~~~---~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ 120 (538)
++.-++|.+- ....+..|+++.|++. .+. ++..|++|+.||||+|.|+ .+-..-.. +-+++.|.|+.|.+.
T Consensus 292 S~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~K-LGNIKtL~La~N~iE-- 365 (490)
T KOG1259|consen 292 SGNLITQIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLK-LGNIKTLKLAQNKIE-- 365 (490)
T ss_pred cccchhhhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhh-hcCEeeeehhhhhHh--
Confidence 4455677542 2467999999999997 333 3888999999999999998 55443334 889999999999985
Q ss_pred CCccCcCCCCCcEeeecCccccCCC-CccccCCccccEEecccccCCCCCC
Q 040267 121 IPHELGNCVYLNTLYLSYNRLSGPL-PPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 121 ~p~~~~~l~~L~~L~ls~N~l~g~~-p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
--+.++.|.+|..||+++|++...- -..+++|+-|+++.|.+|.+.+.+.
T Consensus 366 ~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 366 TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 2346888999999999999998321 2468999999999999999997543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.39 E-value=1e-06 Score=82.81 Aligned_cols=97 Identities=23% Similarity=0.254 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHhcCCCCCC-----------------cccEEEeecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 040267 319 EKQFLLEMKQVGLLKHPNL-----------------EKPLVYKYMSNG-TLYSLLHSNGNTALDWPSRLRIGLGAARGLS 380 (538)
Q Consensus 319 ~~~~~~E~~~l~~l~H~ni-----------------~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~ 380 (538)
..+..+|...+..++...| ..++|+|++++. +|.+++.... ..+......++.+++..++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHH
Confidence 4567888888888876665 226899999874 7999988644 2566778899999999999
Q ss_pred HHhcCCCCCccccCCCCCCeeeCCCC---CeEEEeccCCcccC
Q 040267 381 WLHHCCHPPCLHQNISSSVILVDEDF---DARIMDFGFSRLTN 420 (538)
Q Consensus 381 yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~ 420 (538)
-||+ .+|+|+|+++.|||++.+. .+.++||+-++...
T Consensus 133 ~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 9999 9999999999999999886 89999999877654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.8e-08 Score=81.63 Aligned_cols=113 Identities=19% Similarity=0.257 Sum_probs=94.2
Q ss_pred CCEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..++.++|++|.|. .+|+.|. .++.++.|+|++|.++ .+|.++.. ++.|+.|+++.|.|. ..|.-+..|.+|..|
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aa-m~aLr~lNl~~N~l~-~~p~vi~~L~~l~~L 128 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAA-MPALRSLNLRFNPLN-AEPRVIAPLIKLDML 128 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhh-hHHhhhcccccCccc-cchHHHHHHHhHHHh
Confidence 46899999999999 4555554 4668999999999999 99999877 999999999999998 788888889999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
+..+|.+. ++|-.+..-.+.-..++.++.+.+.-+.-+
T Consensus 129 ds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 129 DSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred cCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccc
Confidence 99999998 788665554555566778888888776543
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.1e-07 Score=95.42 Aligned_cols=102 Identities=38% Similarity=0.592 Sum_probs=54.1
Q ss_pred EEEEEcCCCCccccCcccccCCC-CCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 58 ILSLELEEMNLSGQVPESLQSCK-SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
++.|++.+|+++ .+|+....++ +|+.|++++|.+. .+|..+.. +++|+.|++++|+++ .+|...+.++.|+.|++
T Consensus 118 l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~-l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 118 LTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRN-LPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred eeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhc-cccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 555555555555 4444444443 5555555555555 44444444 555555555555555 45544445555555555
Q ss_pred cCccccCCCCccccCCccccEEeccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~ 164 (538)
++|+++ .+|.....+..|+.|.+++|.
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~ 220 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNS 220 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCc
Confidence 555555 455544344445555555553
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.3e-07 Score=100.23 Aligned_cols=170 Identities=21% Similarity=0.239 Sum_probs=116.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
.-++|...+-+-+|.++.++-+.- ..|...+.|....... ..+....+-.++-..+||-+ ..+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 345566667788889998888773 2343444444322111 11122223233333334443 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
+++|..+++|...++..+ ..+..-.......+.++++|||. ..+.|+|++|.|++...++..+++|||.....+.
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999998876 34444445556677789999998 7799999999999999999999999984432110
Q ss_pred ------------------------------------------------------CCCCccCcccHHHHHHHHHhCCCCCC
Q 040267 422 ------------------------------------------------------DASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 422 ------------------------------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
.....+|.|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 04567899999999999999999998
Q ss_pred CCccc
Q 040267 448 INASE 452 (538)
Q Consensus 448 ~~~~~ 452 (538)
....+
T Consensus 1037 a~tpq 1041 (1205)
T KOG0606|consen 1037 AETPQ 1041 (1205)
T ss_pred Ccchh
Confidence 65443
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=3e-08 Score=103.75 Aligned_cols=104 Identities=34% Similarity=0.450 Sum_probs=84.8
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCCcEee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLY 135 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ 135 (538)
.+...+.+.|.|. .+..++.-++.|+.|||++|+++ ... .+.. +++|++|||++|.+. .+|.. ...|. |+.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~-~v~-~Lr~-l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFT-KVD-NLRR-LPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhh-hhH-HHHh-cccccccccccchhc-cccccchhhhh-heeee
Confidence 5677888888887 67778888999999999999998 443 5554 999999999999998 67753 33444 99999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
|++|.++. + ..+.+|.+|+.||+++|-|++-
T Consensus 239 lrnN~l~t-L-~gie~LksL~~LDlsyNll~~h 269 (1096)
T KOG1859|consen 239 LRNNALTT-L-RGIENLKSLYGLDLSYNLLSEH 269 (1096)
T ss_pred ecccHHHh-h-hhHHhhhhhhccchhHhhhhcc
Confidence 99999983 3 2477889999999999999864
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.5e-07 Score=93.60 Aligned_cols=117 Identities=29% Similarity=0.434 Sum_probs=93.5
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|++++|.+. .+|..++.+++|+.|+++.|.++ .+|...+. ++.|+.|++++|+++ .+|...+.+..|++|.+
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~-~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~ 216 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSN-LSNLNNLDLSGNKIS-DLPPEIELLSALEELDL 216 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhh-hhhhhheeccCCccc-cCchhhhhhhhhhhhhh
Confidence 7999999999998 67777899999999999999999 88887655 899999999999998 88887777777999999
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
++|.+. ..+..+.++.++..+.+++|++.. ++..++.+..+
T Consensus 217 ~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l 257 (394)
T COG4886 217 SNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNL 257 (394)
T ss_pred cCCcce-ecchhhhhcccccccccCCceeee-ccchhcccccc
Confidence 999654 466677777778888888877764 23334443333
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.7e-05 Score=73.71 Aligned_cols=127 Identities=15% Similarity=0.206 Sum_probs=83.1
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHH----------HHHHHHHHHhcCCCCCC----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEK----------QFLLEMKQVGLLKHPNL---------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~----------~~~~E~~~l~~l~H~ni---------- 337 (538)
..++|...+++-......|.+-.. +|..+++|..+......+ ...+++..+.+++-..+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 345566666666655555555555 678899998764221111 12233443334322111
Q ss_pred ---------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 338 ---------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 338 ---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
..+++|||++|..|.+... ++. .++..+++++.-+|+ .|+.|+|..|.|++++++ .+
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~-~i 173 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNN-GI 173 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECC-cE
Confidence 2348999999988776532 222 355667788999999 999999999999999865 59
Q ss_pred EEEeccCCccc
Q 040267 409 RIMDFGFSRLT 419 (538)
Q Consensus 409 kl~Dfg~a~~~ 419 (538)
++.||+..+..
T Consensus 174 ~iID~~~k~~~ 184 (229)
T PF06176_consen 174 RIIDTQGKRMS 184 (229)
T ss_pred EEEECcccccc
Confidence 99999887653
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.2e-05 Score=76.38 Aligned_cols=227 Identities=14% Similarity=0.129 Sum_probs=133.8
Q ss_pred CCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC------------------cccEEEe
Q 040267 284 AQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL------------------EKPLVYK 344 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni------------------~~~lv~e 344 (538)
.+..||+|+.+.+|-.-- -.-.+-|++.......+ ..-+..|... .||-+ +..+.|.
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~--aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQ--AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHH--HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 346799999999996431 11223466543221111 1122333333 45544 2235666
Q ss_pred ecCCC-CHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc--
Q 040267 345 YMSNG-TLYSLLHSN----GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR-- 417 (538)
Q Consensus 345 ~~~~g-sL~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~-- 417 (538)
.+++. .+..++... .-....|...+++++.+|.+.+-||+ .|.+-+|+.++|+|+++++.+.|.|-..-.
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeec
Confidence 66553 233333221 12468999999999999999999999 888999999999999999988887743221
Q ss_pred --------------ccC-----------CCCCCccCcccHHHHHHHHHhC-CCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 418 --------------LTN-----------GDASLQKDVHGFGVVLLELVTG-QKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 418 --------------~~~-----------~~~~~~~DV~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
+.. .+.+...|-|.+||++++++.| ++||.+-........-.. ..+..+.
T Consensus 168 ~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E----~~Ia~g~ 243 (637)
T COG4248 168 ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE----TDIAHGR 243 (637)
T ss_pred cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch----hhhhcce
Confidence 111 1156778999999999999885 999986332211111000 0011111
Q ss_pred ccccccccc--cC-------CCcHHHHHHHHHHHhHccCC--CCCCCCCHHHHHHHHHHhHHhc
Q 040267 472 IKDVIDKAL--TG-------KGYDDEILQFLQIACKCVAV--RPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 472 ~~~~~d~~l--~~-------~~~~~~~~~l~~l~~~cl~~--dP~~RPs~~evl~~L~~i~~~~ 524 (538)
+...-|... +. ...+..+..+.. +|+.. .+.-|||++.-+..|.++.+++
T Consensus 244 f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~---qaF~~~~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 244 FAYASDQRRGLKPPPRSIPLSMLPPDVQALFQ---QAFTESGVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred eeechhccCCCCCCCCCCChhhcCHHHHHHHH---HHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence 111111111 00 111223344444 77764 3678999999999998887765
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.4e-06 Score=94.80 Aligned_cols=122 Identities=25% Similarity=0.325 Sum_probs=71.5
Q ss_pred EEEEEcCCCCccccCcccccCCCCCCeEEccCCcC-CCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL-FGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l-~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+....+.+|.+. .++... .++.|++|-+..|.. -..++..++..++.|++|||++|.=-+.+|..+++|.+|++|+|
T Consensus 525 ~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L 602 (889)
T KOG4658|consen 525 VRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDL 602 (889)
T ss_pred eeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccc
Confidence 444445455443 222222 223566666666651 22556555555677777777766655567777777777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++..++ .+|..+.+|+.|.+||+..+.-...+|.....+.+|+.+
T Consensus 603 ~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L 647 (889)
T KOG4658|consen 603 SDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVL 647 (889)
T ss_pred cCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEE
Confidence 777766 567777777777777777665544455544445555544
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.5e-06 Score=57.48 Aligned_cols=35 Identities=51% Similarity=0.658 Sum_probs=12.6
Q ss_pred CcEEEcccCCCCCCCCccCcCCCCCcEeeecCcccc
Q 040267 107 LVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLS 142 (538)
Q Consensus 107 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 142 (538)
|++|++++|+++ .+|..+++|++|++|++++|+++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 333344444333 23333333333333333333333
|
... |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.01 E-value=6e-05 Score=70.88 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=96.2
Q ss_pred cCHHHHHHHhcCCCCCCeEe---ecCCceEEEEEeCCCCEEEEEEccccccc--------------------HH-----H
Q 040267 270 LKLVHLIAATSNFSAQNVLV---STWTGTTYKAMLLDGSMLAIKRLSACKLG--------------------EK-----Q 321 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig---~G~~g~vy~~~~~~~~~vavK~~~~~~~~--------------------~~-----~ 321 (538)
.+++.+....+........| .|.-+.||+|.-.++..+|||+++..... .. -
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 45566666666666655555 56667899999888999999998532110 01 1
Q ss_pred HHHHHHHHhcCCCCCC---------cccEEEeecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 040267 322 FLLEMKQVGLLKHPNL---------EKPLVYKYMSNG-TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCL 391 (538)
Q Consensus 322 ~~~E~~~l~~l~H~ni---------~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iv 391 (538)
...|..-|.++.--.+ .-.|||||+... .-.-.|+.- .+...+...+..++++.+.-|-. ..++|
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~--~a~LV 189 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYK--EAGLV 189 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHH--hcCcc
Confidence 3456666766643333 335999998653 111112111 23333566777778777777654 27899
Q ss_pred ccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 392 HQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 392 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|+||..=|||+. ++.+.++|+|-|.....
T Consensus 190 HgDLSEyNiL~~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 190 HGDLSEYNILVH-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred cccchhhheEEE-CCeEEEEECccccccCC
Confidence 999999999999 88999999988766553
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.3e-06 Score=90.24 Aligned_cols=127 Identities=20% Similarity=0.274 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-----------------------------
Q 040267 372 GLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD----------------------------- 422 (538)
Q Consensus 372 ~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----------------------------- 422 (538)
+.+++.|+.|+|. ..++||++|.|++|.++.++..||+.|+++....+.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3456699999998 588999999999999999999999999887644331
Q ss_pred ---CCCccCcccHHHHHHHHHhCCCC-CCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhH
Q 040267 423 ---ASLQKDVHGFGVVLLELVTGQKP-FEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACK 498 (538)
Q Consensus 423 ---~~~~~DV~S~Gvvl~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~ 498 (538)
.+.++|+||+|+++|-+..|..+ +....... ......... +... .. .....+.++++-+. +
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-----~~~~~~~~~---~~~~---~~-~s~~~p~el~~~l~---k 247 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-----SYSFSRNLL---NAGA---FG-YSNNLPSELRESLK---K 247 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcc-----hhhhhhccc---cccc---cc-ccccCcHHHHHHHH---H
Confidence 67899999999999999854444 33211100 000000000 0000 00 01223445555566 8
Q ss_pred ccCCCCCCCCCHHHHHH
Q 040267 499 CVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 499 cl~~dP~~RPs~~evl~ 515 (538)
.+..++.-||++.++..
T Consensus 248 ~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 248 LLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HhcCCcccCcchhhhhc
Confidence 88999999998877654
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.4e-05 Score=68.55 Aligned_cols=121 Identities=19% Similarity=0.145 Sum_probs=83.8
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCCCHHHHhh
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNGTLYSLLH 356 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~gsL~~~l~ 356 (538)
.+.|++|++|.||.|.+ .|..+|+|.-+.+ ..+..+..|+++|..+.-.++ .-++.|||+.|-.|.++-.
T Consensus 27 ~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~d-s~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~~~~~ 104 (201)
T COG2112 27 EKELAKGTTSVVYLGEW-RGGEVALKVRRRD-SPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLGKLEI 104 (201)
T ss_pred hhhhhcccccEEEEeec-cCceEEEEEecCC-cchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchhhhhh
Confidence 46799999999999998 4558888876543 335778999999999986666 2347799998878877654
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCC-CCeeeCCCCCeEEEeccCCccc
Q 040267 357 SNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS-SVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 357 ~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp-~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
.. +-.. ...++.+---|-. .+|-|+.|.- ...++-.+..+.|+||..|..-
T Consensus 105 ~~-----~rk~----l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 105 GG-----DRKH----LLRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred cc-----cHHH----HHHHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 32 1222 2334444223444 7888888764 4444444459999999988743
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.98 E-value=6.4e-06 Score=56.18 Aligned_cols=37 Identities=43% Similarity=0.717 Sum_probs=24.9
Q ss_pred CCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCC
Q 040267 80 KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118 (538)
Q Consensus 80 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~ 118 (538)
++|++|+|++|+|+ .+|+.+.. +++|+.|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~-l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSN-LPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTT-CTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhC-CCCCCEEEecCCCCC
Confidence 35777777777777 66666665 777777777777776
|
... |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=97.96 E-value=8.1e-05 Score=70.84 Aligned_cols=128 Identities=12% Similarity=0.145 Sum_probs=75.5
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-------------cccEEEeecCCCC-H
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------------EKPLVYKYMSNGT-L 351 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~e~~~~gs-L 351 (538)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-.+ ...+|||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 56899999999984 24567788876532 34567889998887753333 2368999998863 2
Q ss_pred HHHh---------------------hcCCCCCCCHHHHHH-HHH----------HHHH-HHHHHhcC-CCCCccccCCCC
Q 040267 352 YSLL---------------------HSNGNTALDWPSRLR-IGL----------GAAR-GLSWLHHC-CHPPCLHQNISS 397 (538)
Q Consensus 352 ~~~l---------------------~~~~~~~l~~~~~~~-i~~----------~ia~-~L~yLH~~-~~~~ivH~Dlkp 397 (538)
...+ |.-............ +-. .+.. ...+|... ....++|+|+.|
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~ 162 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI 162 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence 1111 111001111111110 000 0111 12222211 124578999999
Q ss_pred CCeeeCCCCCeEEEeccCCcc
Q 040267 398 SVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 398 ~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.||++++++ +.+.||+.+..
T Consensus 163 ~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 163 GNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CcEEEcCCC-cEEEechhcCc
Confidence 999999888 99999988754
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.2e-06 Score=93.30 Aligned_cols=107 Identities=28% Similarity=0.344 Sum_probs=94.0
Q ss_pred CCEEEEEcCCCC--ccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcE
Q 040267 56 NRILSLELEEMN--LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133 (538)
Q Consensus 56 ~~l~~L~L~~n~--l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 133 (538)
..+++|-+..|. +.-..+..|..++.|++||||+|.=-+.+|.+++. +-+|++|+|+...++ .+|..+++|..|.+
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~-Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE-LVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh-hhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 468999999996 55344455888999999999999877899999998 999999999999998 99999999999999
Q ss_pred eeecCccccCCCCccccCCccccEEeccccc
Q 040267 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 134 L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~ 164 (538)
||+..+.-...+|..+..|.+|++|.+..-.
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccc
Confidence 9999998776778877889999999987765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 538 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 2e-36 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-35 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-20 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-20 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-12 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-12 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-12 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-11 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 9e-11 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 3e-10 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-07 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-07 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-07 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-07 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-07 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 3e-07 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 3e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 3e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 4e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 4e-07 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 4e-07 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 5e-07 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 6e-07 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 6e-07 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 6e-07 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 7e-07 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 8e-07 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 9e-07 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 5e-06 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-05 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-04 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-04 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-04 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 1e-04 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-04 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-04 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-04 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-04 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 3e-04 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 3e-04 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-04 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 3e-04 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-04 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-04 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-04 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 3e-04 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-04 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-04 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-04 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 4e-04 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 4e-04 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 4e-04 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 4e-04 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 4e-04 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 4e-04 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 4e-04 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 4e-04 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 4e-04 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 4e-04 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 5e-04 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 5e-04 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 5e-04 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-04 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 6e-04 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 6e-04 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 6e-04 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-04 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 6e-04 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 7e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 8e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 8e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 224 bits (573), Expect = 4e-69
Identities = 94/278 (33%), Positives = 148/278 (53%), Gaps = 39/278 (14%)
Query: 275 LIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL--GEKQFLLEMKQVGLL 332
L A+ NFS +N+L G YK L DG+++A+KRL + GE QF E++ + +
Sbjct: 25 LQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA 84
Query: 333 KHPNL-----------EKPLVYKYMSNGTLYSLLH--SNGNTALDWPSRLRIGLGAARGL 379
H NL E+ LVY YM+NG++ S L LDWP R RI LG+ARGL
Sbjct: 85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGL 144
Query: 380 SWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL--------------------- 418
++LH C P +H+++ ++ IL+DE+F+A + DFG ++L
Sbjct: 145 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 204
Query: 419 ---TNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475
+ G +S + DV G+GV+LLEL+TGQ+ F++ L++W+ L +++ +
Sbjct: 205 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEAL 264
Query: 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
+D L G D+E+ Q +Q+A C P E+ M +V
Sbjct: 265 VDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 1e-57
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 44/278 (15%)
Query: 275 LIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-GEKQFLLEMKQVGLLK 333
L AT+NF + ++ G YK +L DG+ +A+KR + G ++F E++ + +
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 334 HPNL-----------EKPLVYKYMSNGTLYSLLH--SNGNTALDWPSRLRIGLGAARGLS 380
HP+L E L+YKYM NG L L+ ++ W RL I +GAARGL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 381 WLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL-TNGD----------------- 422
+LH +H+++ S IL+DE+F +I DFG S+ T D
Sbjct: 154 YLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDP 210
Query: 423 --ASLQK-----DVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475
+ DV+ FGVVL E++ + I S NL W + ++G+++ +
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
+D L K + + +F A KC+A+ +++ SM V
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 186 bits (476), Expect = 3e-55
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 59/296 (19%)
Query: 275 LIAATSNFSAQNVLVSTWT------GTTYKAMLLDGSMLAIKRLSACKL-----GEKQFL 323
L T+NF + + V G YK ++ + +A+K+L+A ++QF
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 324 LEMKQVGLLKHPNL-----------EKPLVYKYMSNGTLYSLLH-SNGNTALDWPSRLRI 371
E+K + +H NL + LVY YM NG+L L +G L W R +I
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 372 GLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL------------- 418
GAA G+++LH H +H++I S+ IL+DE F A+I DFG +R
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRI 195
Query: 419 -----------TNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ-L 466
G+ + + D++ FGVVLLE++TG + + + L++ ++
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ----LLLDIKEEIE 251
Query: 467 SSSGRIKDVIDKALTGKGYD-DEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521
I+D IDK + D + +A +C+ + ++ + +V L +
Sbjct: 252 DEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 1e-38
Identities = 56/315 (17%), Positives = 93/315 (29%), Gaps = 80/315 (25%)
Query: 275 LIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH 334
L + V G +KA L +A+K Q E+ + +KH
Sbjct: 19 LYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKH 77
Query: 335 PNL---------------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGL 379
N+ + L+ + G+L L +N + W I ARGL
Sbjct: 78 ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGL 134
Query: 380 SWLHH-------CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL-------------- 418
++LH P H++I S +L+ + A I DFG +
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 419 ----------------TNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNW 462
DA L+ D++ G+VL EL + + E Y
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE--YMLPFEEE 252
Query: 463 IDQLSSSGRIKDVIDKALTGKGYDDEI----------LQFLQIACKCV----AVRPKEKW 508
I Q S +++V+ K + + +C R
Sbjct: 253 IGQHPSLEDMQEVVVH----KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL---- 304
Query: 509 SMYQVYISLCSIAEQ 523
S V + +
Sbjct: 305 SAGCVGERITQMQRL 319
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-36
Identities = 59/171 (34%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 10 EDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWN-GLENRILSLELEEMN 67
D + L IK +P LSSW T + GV C R+ +L+L +N
Sbjct: 5 PQDKQALLQIKKDLGNP-TTLSSWLPTTDCCN--RTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 68 LSGQ--VPESLQSCKSLQVLNLS-TNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE 124
L +P SL + L L + NNL G IP + K L L +++ ++SG IP
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDF 120
Query: 125 LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFN 174
L L TL SYN LSG LPP +SSL L + N +SG IP S+ +
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 2e-30
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT 120
L+ LSG +P S+ S +L + N + G IP + S+ +S N L+G
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 121 IPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
IP N L + LS N L G S ++ +A N L+ +
Sbjct: 190 IPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGL 242
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 5e-28
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 54 LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLS 113
S+ + L+G++P + + +L ++LS N L G + L+
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGS-DKNTQKIHLA 229
Query: 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
N L+ + ++G LN L L NR+ G LP L+ L L +V++N L G IP
Sbjct: 230 KNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288
Query: 174 N 174
N
Sbjct: 289 N 289
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-25
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPT--QLCKWFPYLVSLDLSNNDLS 118
++L L G S K+ Q ++L+ N+L + L LDL NN +
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS----KNLNGLDLRNNRIY 257
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN-CLSG 167
GT+P L +L++L +S+N L G + PQ +L R + A N CL G
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFDVSAYANNKCLCG 306
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 6e-31
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+ G + + S+ L++S N L G IP ++ PYL L+L +ND+SG
Sbjct: 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISG 670
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
+IP E+G+ LN L LS N+L G +P +S+L L + ++ N LSG IP
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 5e-30
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 43 CRFNGV---SCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQ 99
F+G + +N + L L+ +G++P +L +C L L+LS N L G IP+
Sbjct: 378 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437
Query: 100 LCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS 159
L L L L N L G IP EL L TL L +N L+G +P LS+ L S
Sbjct: 438 LGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 496
Query: 160 VAYNCLSGRIPSFF 173
++ N L+G IP +
Sbjct: 497 LSNNRLTGEIPKWI 510
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 5e-30
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 15/197 (7%)
Query: 2 SFTPTATAEDDVKCLAGIKSFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSL 61
+P+ + ++ L K + L WS + C F+GV+C + ++ S+
Sbjct: 3 QASPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKN----PCTFDGVTCRDD---KVTSI 55
Query: 62 ELEEMNLS---GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
+L L+ V SL S L+ L LS +++ G + C L SLDLS N LS
Sbjct: 56 DLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKC--SASLTSLDLSRNSLS 113
Query: 119 GTIP--HELGNCVYLNTLYLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
G + LG+C L L +S N L P L L+ ++ N +SG +
Sbjct: 114 GPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVL 173
Query: 176 AMKMDMLADSRLGGANL 192
+ L + G +
Sbjct: 174 SDGCGELKHLAISGNKI 190
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-29
Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 5/147 (3%)
Query: 27 GKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLN 86
K S N G + N + + G E L + N
Sbjct: 559 FKQSGKIAANFIAGKRYVYIK----NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 87 LSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLP 146
+++ G ++ LD+S N LSG IP E+G+ YL L L +N +SG +P
Sbjct: 615 ITSRVYGGHTSPTFDN-NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 147 PQLSSLVRLKQFSVAYNCLSGRIPSFF 173
++ L L ++ N L GRIP
Sbjct: 674 DEVGDLRGLNILDLSSNKLDGRIPQAM 700
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 5e-29
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 67 NLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126
L G++P+ L K+L+ L L N+L G+IP+ L L + LSNN L+G IP +G
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC-TNLNWISLSNNRLTGEIPKWIG 511
Query: 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
L L LS N SG +P +L L + N +G IP+
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 6e-29
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L + G +P KSLQ L+L+ N G+IP L L LDLS N G
Sbjct: 251 LLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIP-SFFNGAM 177
+P G+C L +L LS N SG LP L + LK +++N SG +P S N +
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 178 KMDML 182
+ L
Sbjct: 369 SLLTL 373
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-27
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 60 SLELEEMNLSGQVP-ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
SL L N SG++P ++L + L+VL+LS N G++P L L++LDLS+N+ S
Sbjct: 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381
Query: 119 GTIPHELGNC--VYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
G I L L LYL N +G +PP LS+ L +++N LSG IPS
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-27
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+L L+ +L+G++P L +C +L ++LS N L G+IP + + L L LSNN SG
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR-LENLAILKLSNNSFSG 528
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179
IP ELG+C L L L+ N +G +P + +A N ++G+ +
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ----SGKIAANFIAGKRYVYIKNDGMK 584
Query: 180 DML 182
Sbjct: 585 KEC 587
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-26
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L + +SG V + C +L+ L++S+NN IP L L LD+S N LSG
Sbjct: 182 HLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGD-CSALQHLDISGNKLSG 237
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179
+ C L L +S N+ GP+PP L L+ S+A N +G IP F +GA
Sbjct: 238 DFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDT 295
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 1e-21
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Query: 67 NLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126
+ SG +P L C+SL L+L+TN G IP + K S ++ N ++G +
Sbjct: 525 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ-----SGKIAANFIAGKRYVYIK 579
Query: 127 NCVYLNTLYLSYN--RLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182
N + + N G QL+ L ++ G F+ M L
Sbjct: 580 NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 7e-30
Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 39/191 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL--------EKP-- 340
G +K G+ + +K L + F E ++ + HPN+ P
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 341 ---LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
L+ +M G+LY++LH N +D ++ L ARG+++L H P ++S
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNS 141
Query: 398 SVILVDEDFDARIMDFGFSRLTNGDAS-----------LQK----------DVHGFGVVL 436
+++DED ARI LQK D+ F V+L
Sbjct: 142 RSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLL 201
Query: 437 LELVTGQKPFE 447
ELVT + PF
Sbjct: 202 WELVTREVPFA 212
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 9e-29
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------EKPL--VYK 344
G KA +AIK++ + K F++E++Q+ + HPN+ P+ V +
Sbjct: 22 GVVCKAKW-RAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVME 79
Query: 345 YMSNGTLYSLLHSNGNTA-LDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
Y G+LY++LH + L ++G+++LH +H+++ +L+
Sbjct: 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 139
Query: 404 EDFD-ARIMDFGFSRLTNGDASLQK--------------------DVHGFGVVLLELVTG 442
+I DFG + + K DV +G++L E++T
Sbjct: 140 AGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 199
Query: 443 QKPFE 447
+KPF+
Sbjct: 200 RKPFD 204
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-27
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 40/192 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPN--------LEKP-- 340
GT ++A GS +A+K L +FL E+ + L+HPN + P
Sbjct: 51 GTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 341 -LVYKYMSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
+V +Y+S G+LY LLH +G LD RL + A+G+++LH +PP +H+N+ S
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSP 168
Query: 399 VILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVV 435
+LVD+ + ++ DFG SRL K DV+ FGV+
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
Query: 436 LLELVTGQKPFE 447
L EL T Q+P+
Sbjct: 229 LWELATLQQPWG 240
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-27
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 47/199 (23%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE--------KQFLLEMKQVGLLKHPN-------- 336
G +K L+ D S++AIK L ++F E+ + L HPN
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 337 LEKP-LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
P +V +++ G LY L + + W +LR+ L A G+ ++ +PP +H+++
Sbjct: 93 HNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDL 150
Query: 396 SSSVILVDE-----DFDARIMDFGFSRLTNGDASLQK----------------------D 428
S I + A++ DFG S+ + S D
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKAD 210
Query: 429 VHGFGVVLLELVTGQKPFE 447
+ F ++L ++TG+ PF+
Sbjct: 211 TYSFAMILYTILTGEGPFD 229
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-24
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 49/199 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGE-----KQFLLEMKQVGLLKHPNL--------EKP 340
G Y+A G +A+K + + E K +LKHPN+ ++P
Sbjct: 21 GKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP 79
Query: 341 ---LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
LV ++ G L +L + + + ARG+++LH P +H+++ S
Sbjct: 80 NLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 398 SVILVDEDFDAR--------IMDFGFSRLTNGDASLQK---------------------D 428
S IL+ + + I DFG +R + + D
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSD 196
Query: 429 VHGFGVVLLELVTGQKPFE 447
V +GV+L EL+TG+ PF
Sbjct: 197 VWSYGVLLWELLTGEVPFR 215
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 50/246 (20%), Positives = 84/246 (34%), Gaps = 71/246 (28%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFL--LEMKQVGLLKHPNL-------EKP---- 340
G YK LD +A+K S + F+ + +V L++H N+ E+
Sbjct: 27 GAVYKG-SLDERPVAVKVFSFA--NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83
Query: 341 -----LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH------HCCHPP 389
LV +Y NG+L L + DW S R+ RGL++LH P
Sbjct: 84 RMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA 140
Query: 390 CLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------------------------- 421
H++++S +LV D I DFG S G
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200
Query: 422 ----------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471
A Q D++ G++ E+ S Y+ + + ++ +
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ---MAFQTEVGNHPT 257
Query: 472 IKDVID 477
+D+
Sbjct: 258 FEDMQV 263
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 6e-24
Identities = 41/208 (19%), Positives = 68/208 (32%), Gaps = 57/208 (27%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------EKP------ 340
G + G +A+K + E+ Q L++H N+ K
Sbjct: 51 GEVWMG-KWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109
Query: 341 --LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-----HCCHPPCLHQ 393
L+ Y NG+LY L S LD S L++ + GL LH P H+
Sbjct: 110 LYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 394 NISSSVILVDEDFDARIMDFGFSR---------------------------------LTN 420
++ S ILV ++ I D G + +
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226
Query: 421 GDASLQKDVHGFGVVLLELVTGQKPFEI 448
+ + D++ FG++L E+ I
Sbjct: 227 FQSYIMADMYSFGLILWEVARRCVSGGI 254
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 5e-23
Identities = 44/208 (21%), Positives = 68/208 (32%), Gaps = 57/208 (27%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKP-- 340
G ++ G +A+K S+ E+ +L+H N+
Sbjct: 22 GEVWRG-SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80
Query: 341 --LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-----HCCHPPCLHQ 393
L+ Y G+LY L LD S LRI L A GL+ LH P H+
Sbjct: 81 LWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 394 NISSSVILVDEDFDARIMDFGFSRL---------------------------------TN 420
++ S ILV ++ I D G + +
Sbjct: 138 DLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDC 197
Query: 421 GDASLQKDVHGFGVVLLELVTGQKPFEI 448
D+ + D+ FG+VL E+ I
Sbjct: 198 FDSYKRVDIWAFGLVLWEVARRMVSNGI 225
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 6e-23
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 45/181 (24%)
Query: 308 AIKRLSACKLGE---KQFLLEMKQVGLLKHPNL-------EKPLVY---KYMSNGTLYSL 354
A+K L+ + F E+ + +H N+ P + ++ +LY
Sbjct: 50 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHH 109
Query: 355 LHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414
LH++ + + I ARG+ +LH +H+++ S+ I + ED +I DFG
Sbjct: 110 LHASETK-FEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFG 165
Query: 415 FSRLTNGDASLQK----------------------------DVHGFGVVLLELVTGQKPF 446
+ + + + DV+ FG+VL EL+TGQ P+
Sbjct: 166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Query: 447 E 447
Sbjct: 226 S 226
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 7e-23
Identities = 41/236 (17%), Positives = 82/236 (34%), Gaps = 60/236 (25%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------EKP------ 340
G ++ G +A+K S+ + E+ Q +L+H N+ K
Sbjct: 56 GEVWRG-KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114
Query: 341 --LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-----HCCHPPCLHQ 393
LV Y +G+L+ L+ + +++ L A GL+ LH P H+
Sbjct: 115 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 394 NISSSVILVDEDFDARIMDFGFSR---------------------------------LTN 420
++ S ILV ++ I D G + + +
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231
Query: 421 GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476
++ + D++ G+V E+ I+ E Y+ + + S ++ V+
Sbjct: 232 FESFKRADIYAMGLVFWEIARRCSIGGIH---EDYQLPYYDLVPSDPSVEEMRKVV 284
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 2e-22
Identities = 43/207 (20%), Positives = 79/207 (38%), Gaps = 60/207 (28%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSAC-KLGEKQFLLE---MKQVGLLKHPNL---------EK 339
G K + G ++ +K L + ++ FL E M+ L+HPN+ +K
Sbjct: 24 GQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC---LEHPNVLKFIGVLYKDK 80
Query: 340 PL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
L + +Y+ GTL ++ S + W R+ A G+++LH +H++++S
Sbjct: 81 RLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNS 136
Query: 398 SVILVDEDFDARIMDFGFSRLTNGDASLQK------------------------------ 427
LV E+ + + DFG +RL + + +
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196
Query: 428 -------DVHGFGVVLLELVTGQKPFE 447
DV FG+VL E++
Sbjct: 197 RSYDEKVDVFSFGIVLCEIIGRVNADP 223
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 2e-21
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 1/127 (0%)
Query: 49 SCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLV 108
S + L N ++ L++ + SL+VL ++ N+ + L
Sbjct: 415 SVFLSLRN-LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473
Query: 109 SLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168
LDLS L P + L L +S+N L L+ + N +
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Query: 169 IPSFFNG 175
Sbjct: 534 KKQELQH 540
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 7e-20
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 2/124 (1%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
L +L+L L S S LQVL+LS + +L +L L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSL-SHLSTLIL 83
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL-SGRIPS 171
+ N + L L L+ + L LK+ +VA+N + S ++P
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 172 FFNG 175
+F+
Sbjct: 144 YFSN 147
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-18
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
Query: 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
++ + E+N ++P++L S + L+LS N L FP L LDLS ++
Sbjct: 10 ITYQCMELNFY-KIPDNLPF--STKNLDLSFNPLRHLGSYSFFS-FPELQVLDLSRCEIQ 65
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
+ +L+TL L+ N + S L L++ L+
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGH 122
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 5e-16
Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 8/116 (6%)
Query: 63 LEEMNLSG------QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
LE + ++G +P+ ++L L+LS L PT L L++S+N+
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS-LSSLQVLNMSHNN 505
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVR-LKQFSVAYNCLSGRIPS 171
L L S N + +L L ++ N +
Sbjct: 506 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 561
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 7e-16
Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 4/131 (3%)
Query: 43 CRFNGVSCWNGLEN-RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLC 101
+ L + L L ++ G +S SL+ L+LS N + + +
Sbjct: 335 NKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFL 393
Query: 102 KWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
L LD +++L + L L +S+ + L L+ +
Sbjct: 394 G-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452
Query: 161 AYNCLSGRIPS 171
A N
Sbjct: 453 AGNSFQENFLP 463
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-15
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL-S 118
+L L + + SLQ L NL + L L++++N + S
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI-GHLKTLKELNVAHNLIQS 138
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV----AYNCLSGRIPSFFN 174
+P N L L LS N++ L L ++ ++ + N ++ P F
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198
Query: 175 G 175
Sbjct: 199 E 199
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL-FGKIPTQLCKWFPYLVSLDLSNNDLS 118
L E NL+ + K+L+ LN++ N + K+P L LDLS+N +
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN-LTNLEHLDLSSNKIQ 162
Query: 119 GTIPHELGNCVYL----NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
+L + +L LS N ++ + P +RL + ++ N S +
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMK 218
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 6e-11
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 67 NLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-- 124
N + SLQVL+ S N++ +L + L L+L+ ND + T H+
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSF 564
Query: 125 LGNCVYLNTLYLSYNRLSGPLPPQLS 150
L L + R+ P
Sbjct: 565 LQWIKDQRQLLVEVERMECATPSDKQ 590
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 9e-11
Identities = 22/163 (13%), Positives = 41/163 (25%), Gaps = 28/163 (17%)
Query: 33 SLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL 92
+ N G+ E R+ L+ + + ++ +L + +
Sbjct: 239 NEGNLEKFDKSALEGLCNLTIEEFRLAYLDY----YLDDIIDLFNCLTNVSSFSLVSVTI 294
Query: 93 FGKIPTQLCKWFPYLVSLDLSNN-------------------DLSGTIPHELGNCVYLNT 133
+ L+L N G + L
Sbjct: 295 ERVKDFS---YNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEF 351
Query: 134 LYLSYNRLS--GPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
L LS N LS G LK +++N + +F
Sbjct: 352 LDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG 394
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 18/134 (13%), Positives = 34/134 (25%), Gaps = 10/134 (7%)
Query: 54 LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLS 113
+ LSL+L ++ P + + L L L N + + L L
Sbjct: 175 MPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLV 233
Query: 114 NNDLSGT------IPHELGNCVYLNTLYLSYNRLS---GPLPPQLSSLVRLKQFSVAYNC 164
+ L L L + + L + FS+
Sbjct: 234 LGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVT 293
Query: 165 LSGRIPSFFNGAMK 178
+ +N +
Sbjct: 294 IERVKDFSYNFGWQ 307
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 3e-21
Identities = 24/133 (18%), Positives = 54/133 (40%), Gaps = 12/133 (9%)
Query: 51 WNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL--------FGKIPTQLCK 102
W+ L++ + +E+ ++P L++ +Q++N++ N +
Sbjct: 245 WDNLKD-LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPV 303
Query: 103 WFPYLVSLDLSNNDL-SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVA 161
+ + + N+L + + L L L YN+L G P S ++L ++A
Sbjct: 304 -GEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG-KLPAFGSEIKLASLNLA 361
Query: 162 YNCLSGRIPSFFN 174
YN ++ +F
Sbjct: 362 YNQITEIPANFCG 374
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 5e-20
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 10/126 (7%)
Query: 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
+ E + K L + + K+PT L P + ++++ N
Sbjct: 227 WENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNRG 285
Query: 118 --------SGTIPHELGNCVYLNTLYLSYNRL-SGPLPPQLSSLVRLKQFSVAYNCLSGR 168
+ + +Y+ YN L + P+ L + +L YN L G+
Sbjct: 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345
Query: 169 IPSFFN 174
+P+F +
Sbjct: 346 LPAFGS 351
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-18
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLF-GKIPTQLCKWFPYLVSLDLS 113
NR +S E ++ Q + +Q++ + NNL + T L K L L+
Sbjct: 282 CNRGISGE--QLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQK-MKKLGMLECL 338
Query: 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPSF 172
N L G +P G+ + L +L L+YN+++ +P +++ S A+N L IP+
Sbjct: 339 YNQLEGKLP-AFGSEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKY-IPNI 395
Query: 173 F 173
F
Sbjct: 396 F 396
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-18
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 8/152 (5%)
Query: 28 KLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNL 87
++W+ N + GVS + R+ L LE SG+VP+++ L+VL L
Sbjct: 56 PGANWN-FNKELDMWGAQPGVSLNS--NGRVTGLSLEGFGASGRVPDAIGQLTELEVLAL 112
Query: 88 STNNLFGKIPTQLCKWFPYLVSL---DLSNNDLSGTIPHELGNCVYLN--TLYLSYNRLS 142
++ K +S T + + ++ +
Sbjct: 113 GSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQ 172
Query: 143 GPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
+ ++ Q N ++ +
Sbjct: 173 KSIKKSSRITLKDTQIGQLSNNITFVSKAVMR 204
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 6e-18
Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 21/136 (15%)
Query: 63 LEEMNLSG----QVPESLQ--SCKSLQVLNLSTNNL-------FGKIPTQLCKWFPYLVS 109
+E ++ + +P S + ++ S N + F + K + S
Sbjct: 379 VENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFK-GINVSS 437
Query: 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG-------PLPPQLSSLVRLKQFSVAY 162
++LSNN +S L+++ L N L+ + L + +
Sbjct: 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRF 497
Query: 163 NCLSGRIPSFFNGAMK 178
N L+ F +
Sbjct: 498 NKLTKLSDDFRATTLP 513
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 1e-17
Identities = 29/129 (22%), Positives = 39/129 (30%), Gaps = 18/129 (13%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL-------FGKIPTQLCKWFPYLVSLDL 112
S+ L +S E + L +NL N L L S+DL
Sbjct: 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNT-YLLTSIDL 495
Query: 113 SNNDLSGTIPHEL--GNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS------VAYNC 164
N L+ + + YL + LSYN S P Q + LK F N
Sbjct: 496 RFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNR 553
Query: 165 LSGRIPSFF 173
P
Sbjct: 554 TLREWPEGI 562
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 7e-17
Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 15/131 (11%)
Query: 63 LEEMNLSG----QVPESLQ--SCKSLQVLNLSTNNLFGKIPTQLCK-----WFPYLVSLD 111
L ++L ++ + + + L ++LS N F K PTQ F D
Sbjct: 490 LTSIDLRFNKLTKLSDDFRATTLPYLVGIDLS-YNSFSKFPTQPLNSSTLKGFGIRNQRD 548
Query: 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
N P + C L L + N + + ++ + + N S
Sbjct: 549 AQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKI--TPNISVLDIKDNPNISIDLS 605
Query: 172 FFNGAMKMDML 182
+ ++ M
Sbjct: 606 YVCPYIEAGMY 616
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 2e-16
Identities = 13/124 (10%), Positives = 38/124 (30%), Gaps = 7/124 (5%)
Query: 52 NGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111
+ + + + N++ V +++ L+ + + + + + + +
Sbjct: 179 SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWE------NEN 231
Query: 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
T + N L + + LP L +L ++ +VA N
Sbjct: 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQL 291
Query: 172 FFNG 175
+
Sbjct: 292 KDDW 295
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 5e-15
Identities = 15/111 (13%), Positives = 38/111 (34%), Gaps = 14/111 (12%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLST------NNLFGKIPTQLCKWFPYLVSLDL 112
L ++LS + P + +L+ + N + P + P L L +
Sbjct: 515 LVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITL-CPSLTQLQI 573
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
+ND+ + ++ ++ L + N + + + + Y+
Sbjct: 574 GSNDIR-KVNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYD 621
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 7e-13
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT 120
+ + + PE + C SL L + +N K+ ++ P + LD+ +N
Sbjct: 547 RDAQGNRTLREWPEGITLCPSLTQLQIG-SNDIRKVNEKI---TPNISVLDIKDNPNISI 602
Query: 121 IPHELGNCVYLNTLYLSYNRLS 142
+ + L Y++
Sbjct: 603 DLSYVCPYIEAGMYMLFYDKTQ 624
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-20
Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 56/191 (29%)
Query: 308 AIKRLSACKLGE---KQFLLEMKQVGLLKHPNL--------EKP---LVYKYMSNGTLYS 353
AI+ + + E K F E+ +H N+ P ++ TLYS
Sbjct: 59 AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYS 118
Query: 354 LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413
++ + LD +I +G+ +LH LH+++ S + D I DF
Sbjct: 119 VVR-DAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNG-KVVITDF 173
Query: 414 GFSRLTNGDASLQK-------------------------------------DVHGFGVVL 436
G ++ + ++ DV G +
Sbjct: 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 437 LELVTGQKPFE 447
EL + PF+
Sbjct: 234 YELHAREWPFK 244
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 7e-18
Identities = 27/123 (21%), Positives = 42/123 (34%), Gaps = 1/123 (0%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
L I L L L + L L++ N + K+ +LC+ P L L+L
Sbjct: 22 DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI-SKLEPELCQKLPMLKVLNL 80
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF 172
+N+LS C L L+L N + L +++N LS
Sbjct: 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGT 140
Query: 173 FNG 175
Sbjct: 141 QVQ 143
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 1e-17
Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 2/143 (1%)
Query: 42 ICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLC 101
+ + + + + L L + +S ++ L+VL+L N + ++ Q
Sbjct: 367 LRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEW 426
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG--PLPPQLSSLVRLKQFS 159
+ + + LS N + L L L L P L L
Sbjct: 427 RGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILD 486
Query: 160 VAYNCLSGRIPSFFNGAMKMDML 182
++ N ++ G K+++L
Sbjct: 487 LSNNNIANINDDMLEGLEKLEIL 509
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 4e-17
Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 7/119 (5%)
Query: 67 NLSGQVPESLQSCKSLQVLNLSTNNL-------FGKIPTQLCKWFPYLVSLDLSNNDLSG 119
N++ + L+ + L++L+L NNL P K +L L+L +N
Sbjct: 491 NIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDE 550
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178
+ L + L N L+ ++ V LK ++ N ++ F A +
Sbjct: 551 IPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR 609
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 6e-17
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 1/115 (0%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
SL++ +S PE Q L+VLNL N L + L L L +N +
Sbjct: 53 SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA-FCTNLTELHLMSNSIQK 111
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
+ L TL LS+N LS L L++ ++ N + +
Sbjct: 112 IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELD 166
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 4e-15
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWF-PYLVSLDLSNNDLS 118
+L+L LS + ++LQ L LS N + +L + L L+LS+N +
Sbjct: 125 TLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLS---SLVRLKQFSVAYNCLSGRIPSFFNG 175
P L L+L+ +L L +L + ++ S++ + LS + F G
Sbjct: 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLG 244
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-14
Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 5/122 (4%)
Query: 54 LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLS 113
L+ + +L S Q K L+ LN+ N++ G I + + L L LS
Sbjct: 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG-IKSNMFTGLINLKYLSLS 361
Query: 114 NNDLSGTIPHELG----NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRI 169
N+ S L+ L L+ N++S S L L+ + N + +
Sbjct: 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Query: 170 PS 171
Sbjct: 422 TG 423
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 5e-14
Identities = 28/163 (17%), Positives = 48/163 (29%), Gaps = 12/163 (7%)
Query: 60 SLELEEMNLSGQVP-ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
L+L + ++ + + +++ + LS N P L L L L
Sbjct: 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFAL-VPSLQRLMLRRVALK 467
Query: 119 G--TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176
+ P L L LS N ++ L L +L+ + +N L+ G
Sbjct: 468 NVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG 527
Query: 177 MKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSL 219
+ S L +L I F L
Sbjct: 528 PIYFLKGLSHL-------HILNLESNGFDEIP-VEVFKDLFEL 562
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNR 140
S +V + S L ++P L + L+L++N L L +L + +N
Sbjct: 5 SHEVADCSHLKLT-QVPDDL---PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT 60
Query: 141 LSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
+S P L LK ++ +N LS F
Sbjct: 61 ISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 60 SLELEEMNLSGQVPESLQ---SCKSLQVLNLSTNNLFGKIPTQLCKW-FPYLVSLDLSNN 115
L L + L + E L + S++ L+LS + L T + L LDLS N
Sbjct: 199 GLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 258
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170
+L+ L +L YN + L L ++ ++ + I
Sbjct: 259 NLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS 313
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-12
Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 10/124 (8%)
Query: 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN- 115
+ L+L NL+ +S L+ L NN+ L + L+L +
Sbjct: 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHG-LFNVRYLNLKRSF 307
Query: 116 --------DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167
L L L + N + G + L+ LK S++ + S
Sbjct: 308 TKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367
Query: 168 RIPS 171
R +
Sbjct: 368 RTLT 371
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 3e-09
Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 2/114 (1%)
Query: 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
+ L LE E + L++++L NNL + L SL+L N
Sbjct: 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNN-QVSLKSLNLQKNL 595
Query: 117 LSGTIPHELGNCVY-LNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRI 169
++ G L L + +N + + + LS
Sbjct: 596 ITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVA 161
K D S+ L+ +P +L + L L++N+L + +L V
Sbjct: 1 KCTVSHEVADCSHLKLT-QVPDDLPT--NITVLNLTHNQLRRLPAANFTRYSQLTSLDVG 57
Query: 162 YNCLSGRIPSFFNG 175
+N +S P
Sbjct: 58 FNTISKLEPELCQK 71
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 9e-18
Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 1/141 (0%)
Query: 42 ICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLC 101
+ R S + LE +L L++ N SL L ++ N+ + +
Sbjct: 411 LKRVTEFSAFLSLEK-LLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF 469
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVA 161
L LDLS L L L +S+N L + L L +
Sbjct: 470 ANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCS 529
Query: 162 YNCLSGRIPSFFNGAMKMDML 182
+N + + +
Sbjct: 530 FNRIETSKGILQHFPKSLAFF 550
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 6e-14
Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 5/118 (4%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
L ++LS + + + LQ L+ + L L+ LD+S +
Sbjct: 378 LRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPSFFNG 175
LNTL ++ N ++ L ++ L F+
Sbjct: 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDT 495
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 8e-14
Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 19/161 (11%)
Query: 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
++ + + LS +VP+ + S S + ++LS N L F L LDLS ++
Sbjct: 14 ITYQCMDQKLS-KVPDDIPS--STKNIDLSFNPLKILKSYSFSN-FSELQWLDLSRCEIE 69
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178
+L+ L L+ N + P S L L+ L+ +
Sbjct: 70 TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLIT 129
Query: 179 MDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSL 219
+ L +++ + + F +L
Sbjct: 130 LKKL---------------NVAHNFIHSCKLPAYFSNLTNL 155
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 2/118 (1%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+L L + P S SL+ L L + + L L++++N +
Sbjct: 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKL-ASLESFPIGQLITLKKLNVAHNFIHS 142
Query: 120 -TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176
+P N L + LSYN + L L Q +++ + I + A
Sbjct: 143 CKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQA 200
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 31/180 (17%)
Query: 63 LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+ M+L+G + E + Q L++ L + PT P+L SL L+ N S
Sbjct: 287 VSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTL---DLPFLKSLTLTMNKGS- 341
Query: 120 TIPHELGNCVYLNTLYLSYNRLS--GPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAM 177
I + L+ L LS N LS G L+ +++N + + F G
Sbjct: 342 -ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLE 399
Query: 178 KMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWL-WNNLTRVSK 236
++ L D L + AF + L+ L + + N
Sbjct: 400 ELQHL---------------DFQHSTLKRVTEFSAFLSLEKLLY---LDISYTNTKIDFD 441
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 24/119 (20%), Positives = 34/119 (28%), Gaps = 10/119 (8%)
Query: 63 LEEMNLSG-------QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
L ++LS S SL+ L+LS N I + L LD ++
Sbjct: 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGA--IIMSANFMGLEELQHLDFQHS 409
Query: 116 DLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
L + L L +SY L L +A N S
Sbjct: 410 TLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 44 RFNGVSCWNGLEN--RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLC 101
F + N N + L+L + L + LQ+LN+S NNL +
Sbjct: 459 SFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLS 142
+ L +LD S N + + L L+ N ++
Sbjct: 519 Q-LYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 17/144 (11%), Positives = 37/144 (25%), Gaps = 14/144 (9%)
Query: 57 RILSLELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
R +++S + + L L L N I + L L
Sbjct: 177 RENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRL 236
Query: 113 SNNDLSG---------TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
+ +I L + ++ L+Y + L + S+A
Sbjct: 237 ILGEFKDERNLEIFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295
Query: 164 CLSGRIPSFFNGAMKMDMLADSRL 187
+ + + + +L
Sbjct: 296 SIKYLEDVPKHFKWQSLSIIRCQL 319
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-06
Identities = 14/121 (11%), Positives = 32/121 (26%), Gaps = 15/121 (12%)
Query: 60 SLELEEMNLSG------QVPESLQSCKSLQVLNLSTNNLFG--KIPTQLCKWFPYLVS-- 109
++L E+ L G + LQ+ L V L + L
Sbjct: 203 GIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVT 262
Query: 110 ---LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L+ + + ++ + L+ + + + + S+ L
Sbjct: 263 IDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQLK 320
Query: 167 G 167
Sbjct: 321 Q 321
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 1e-16
Identities = 26/203 (12%), Positives = 55/203 (27%), Gaps = 16/203 (7%)
Query: 28 KLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNL 87
+L+ L ++ + + + + + N + +++Q LQ++
Sbjct: 397 RLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLT-NRITFISKAIQRLTKLQIIYF 455
Query: 88 STNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPP 147
+ + + N L + L LP
Sbjct: 456 ANSPFTYDNIAVD------WEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPD 509
Query: 148 QLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAI 207
L L L+ ++A N + LAD G + + + L
Sbjct: 510 FLYDLPELQSLNIACNRGISAAQLKAD----WTRLADDEDTGPKI--QIFYMGYNNLEEF 563
Query: 208 IAAGAFGAAPSLMLVFGLWLWNN 230
A+ + L L L +N
Sbjct: 564 PASASLQKMVKLGL---LDCVHN 583
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 76.1 bits (187), Expect = 1e-14
Identities = 24/182 (13%), Positives = 53/182 (29%), Gaps = 33/182 (18%)
Query: 21 SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCK 80
+ +W+ N + GV N R+ L L G+VP+++
Sbjct: 291 GTINNTIHSLNWN-FNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAKGRVPDAIGQLT 347
Query: 81 SLQVLNLSTNNLFGK------------------------IPTQLCKWFPYLVSLDLSNND 116
L+VL+ T++ + L DL +
Sbjct: 348 ELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDA 407
Query: 117 LS-----GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
++ I + + + NR++ + + L +L+ A + + +
Sbjct: 408 INRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIA 466
Query: 172 FF 173
Sbjct: 467 VD 468
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 2e-14
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 19/135 (14%)
Query: 62 ELEEMNLSG----QVPE--SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPY-----LVSL 110
++E + S +P + +S + ++ S N + G + ++
Sbjct: 620 QVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKI-GSEGRNISCSMDDYKGINASTV 678
Query: 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLS-------GPLPPQLSSLVRLKQFSVAYN 163
LS N++ ++T+ LS N ++ P + L + +N
Sbjct: 679 TLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFN 738
Query: 164 CLSGRIPSFFNGAMK 178
L+ F +
Sbjct: 739 KLTSLSDDFRATTLP 753
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 6e-14
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 16/124 (12%)
Query: 63 LEEMNLSG----QVPESLQSCK--SLQVLNLSTNNLFGKIPTQLC-----KWFPYLVSLD 111
L ++L + + ++ L +++S N F PTQ K F D
Sbjct: 730 LTTIDLRFNKLTSLSDDFRATTLPYLSNMDVS-YNCFSSFPTQPLNSSQLKAFGIRHQRD 788
Query: 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL-SGRIP 170
N + P + C L L + N + + +L+ +L +A N S +
Sbjct: 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDIRK-VDEKLTP--QLYILDIADNPNISIDVT 845
Query: 171 SFFN 174
S
Sbjct: 846 SVCP 849
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 4e-13
Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 30/179 (16%)
Query: 62 ELEEMNLSG----QVPES--LQSCKSLQVLNLSTNNLFGKIPT--QLCKWFPYLVSLDLS 113
+++ + + P S LQ L +L+ N + + K L L L
Sbjct: 549 KIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV-RHLEAFGTNVK----LTDLKLD 603
Query: 114 NNDLSGTIPHELGNCV-YLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
N + IP + + L S+N+L P S+ + +YN + +
Sbjct: 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662
Query: 172 FFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN 230
+ S + LS ++ F + + L NN
Sbjct: 663 ISCSMDDYKGINASTV----------TLSYNEIQKFP-TELFATGSPIST---IILSNN 707
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 6e-12
Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 14/114 (12%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNL------STNNLFGKIPTQLCKWFPYLVSLDL 112
L M++S P + L+ + N + + PT + P L+ L +
Sbjct: 755 LSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITT-CPSLIQLQI 813
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
+ND+ + +L L L ++ N + + + + Y+
Sbjct: 814 GSNDIR-KVDEKLTP--QLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 6e-09
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT 120
+ E + Q P + +C SL L + +N K+ +L P L LD+++N
Sbjct: 787 RDAEGNRILRQWPTGITTCPSLIQLQIG-SNDIRKVDEKL---TPQLYILDIADNPNISI 842
Query: 121 IPHELGNCVYLNTLYLSYNRLS 142
+ + L Y++
Sbjct: 843 DVTSVCPYIEAGMYVLLYDKTQ 864
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 8e-16
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VY 343
G + A + +A+K + + + FL E + L+H L ++P+ +
Sbjct: 202 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT 261
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
++M+ G+L L S+ + P + A G++++ +H+++ ++ ILV
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVS 318
Query: 404 EDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLLEL 439
+I DFG +R+ + +++ DV FG++L+E+
Sbjct: 319 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 440 VT-GQKPFE-------INASEEGY 455
VT G+ P+ I A E GY
Sbjct: 379 VTYGRIPYPGMSNPEVIRALERGY 402
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 78.4 bits (193), Expect = 2e-15
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 45/205 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VY 343
G + + +AIK L + + FL E + + L+H L E+P+ V
Sbjct: 281 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT 340
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
+YMS G+L L L P + + A G++++ +H+++ ++ ILV
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVG 397
Query: 404 EDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLLEL 439
E+ ++ DFG +RL + +++ DV FG++L EL
Sbjct: 398 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 440 VT-GQKPFE-------INASEEGYK 456
T G+ P+ ++ E GY+
Sbjct: 458 TTKGRVPYPGMVNREVLDQVERGYR 482
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 2e-15
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 45/205 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VY 343
G + + +AIK L + + FL E + + L+H L E+P+ V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT 257
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
+YMS G+L L L P + + A G++++ +H+++ ++ ILV
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVG 314
Query: 404 EDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLLEL 439
E+ ++ DFG +RL + +++ DV FG++L EL
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 440 VT-GQKPFE-------INASEEGYK 456
T G+ P+ ++ E GY+
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYR 399
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 77.5 bits (191), Expect = 2e-15
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 47/207 (22%)
Query: 294 GTTYKAMLLDGSML-AIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL-- 341
G Y+ + S+ A+K L + ++FL E + +KHPNL E P
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401
+ ++M+ G L L + L + + + +L +H+N+++ L
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCL 350
Query: 402 VDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLL 437
V E+ ++ DFG SRL GD S++ DV FGV+L
Sbjct: 351 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 410
Query: 438 ELVT-GQKPFE-------INASEEGYK 456
E+ T G P+ E+ Y+
Sbjct: 411 EIATYGMSPYPGIDLSQVYELLEKDYR 437
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 4e-15
Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 1/123 (0%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
L N LE L + +L L+L+ + I + L +L L
Sbjct: 30 TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQI-YWIHEDTFQSQHRLDTLVL 88
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF 172
+ N L L L L+ +S L + L+ + N +S
Sbjct: 89 TANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK 148
Query: 173 FNG 175
Sbjct: 149 GFP 151
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 1e-14
Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 20/174 (11%)
Query: 51 WNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSL 110
L + + SL L E+ + C L++L+L+ L K + L L
Sbjct: 372 LRNLSH-LQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430
Query: 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG---PLPPQLSSLVRLKQFSVAYNCLSG 167
+LS++ L + L L L N L +L RL+ +++ LS
Sbjct: 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490
Query: 168 RIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLML 221
F M+ + DLS +L + A + L
Sbjct: 491 IDQHAFTSLKMMNHV---------------DLSHNRLTSSS-IEALSHLKGIYL 528
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 4e-14
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL-- 117
L L S + SL L++ N ++ T + L LDLS++D+
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNG 175
S +L N +L +L LSYN +L+ +A+ L + S F
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 5e-14
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 6/119 (5%)
Query: 62 ELEEMNLSGQ-----VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
L ++L+ ++ QS L L L+ N + L L
Sbjct: 58 NLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLT-ANPLIFMAETALSGPKALKHLFFIQTG 116
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
+S L N L +LYL N +S P+ +LK N + +
Sbjct: 117 ISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSS 175
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 4e-13
Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 3/127 (2%)
Query: 42 ICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLC 101
+ E + S+ L++ + LQ L+L+ +L ++P+ L
Sbjct: 240 DEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLV 298
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSV 160
L L LS N N L L + N L L +L L++ +
Sbjct: 299 G-LSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDL 357
Query: 161 AYNCLSG 167
+++ +
Sbjct: 358 SHDDIET 364
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 4/122 (3%)
Query: 57 RILSLELEEMNLSGQVPESLQSCK--SLQVLNLSTNNLFGKIPTQLCKWFP-YLVSLDLS 113
SL + + L++ SL + + P + S++L
Sbjct: 203 VFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262
Query: 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
+ + L L L+ LS LP L L LK+ ++ N
Sbjct: 263 KHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISA 321
Query: 174 NG 175
+
Sbjct: 322 SN 323
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 63 LEEMNLSG--------QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSN 114
L+ +NL G Q SLQ+ L++L LS +L I + +DLS+
Sbjct: 451 LQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS-IDQHAFTSLKMMNHVDLSH 509
Query: 115 NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
N L+ + L + + L L+ N +S LP L L + + ++ N
Sbjct: 510 NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQN 557
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 22/193 (11%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L + +S L + K+L+ L L +N++ I L LD NN +
Sbjct: 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI-SSIKLPKGFPTEKLKVLDFQNNAIHY 167
Query: 120 TIPHELGNCVYLN--TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA- 176
++ + +L L+ N ++G + P + + I +
Sbjct: 168 LSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNST 226
Query: 177 ---MKMDMLADSRL---------GGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFG 224
+ + D G + + +L K I + F L
Sbjct: 227 IQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS-SNTFHCFSGLQE--- 282
Query: 225 LWL-WNNLTRVSK 236
L L +L+ +
Sbjct: 283 LDLTATHLSELPS 295
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 20/122 (16%), Positives = 31/122 (25%), Gaps = 5/122 (4%)
Query: 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK-WFPYLVSLDLSNN 115
LSL L N + Q LN I L L +
Sbjct: 180 TNLSLNLN-GNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDM 238
Query: 116 DLSGTIPHELGNCVYLN--TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
D P ++ ++ L + L++ + LS +PS
Sbjct: 239 DDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGL 297
Query: 174 NG 175
G
Sbjct: 298 VG 299
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 49 SCWNGLEN--RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPY 106
N L+ R+ L L +LS + S K + ++LS N L +
Sbjct: 467 QKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE----ALSH 522
Query: 107 LVS--LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG 143
L L+L++N +S +P L T+ L N L
Sbjct: 523 LKGIYLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Query: 109 SLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168
+ + N L+ IP L N L S+N L S L+ L + +
Sbjct: 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWI 72
Query: 169 IPSFFNG 175
F
Sbjct: 73 HEDTFQS 79
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 5e-15
Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 45/204 (22%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VY 343
G + + +A+K L + FL E + L+H L ++P+ +
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
+YM NG+L L + L L + A G++++ +H+++ ++ ILV
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVS 143
Query: 404 EDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVLLEL 439
+ +I DFG +RL + +++ DV FG++L E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 440 VT-GQKPFE-------INASEEGY 455
VT G+ P+ I E GY
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGY 227
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 50/259 (19%), Positives = 89/259 (34%), Gaps = 65/259 (25%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL------------ 337
T YK + +A L KL + + ++ +LK HPN+
Sbjct: 40 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK 99
Query: 338 EKPLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
K + + M++GTL + L + +GL +LH PP +H++
Sbjct: 100 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRD 156
Query: 395 ISSSVILVD-EDFDARIMDFGFSRLTNGDASLQKDVHG---------------------- 431
+ I + +I D G + L S K V G
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMYEEKYDESVDVYA 214
Query: 432 FGVVLLELVTGQKPF-EINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEIL 490
FG+ +LE+ T + P+ E + + Y+ +SG DK E+
Sbjct: 215 FGMCMLEMATSEYPYSECQNAAQIYR---------RVTSGVKPASFDKVA-----IPEVK 260
Query: 491 QFLQIACKCVAVRPKEKWS 509
+ ++ C+ E++S
Sbjct: 261 EIIE---GCIRQNKDERYS 276
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 1e-14
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 14/121 (11%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPY--------LVSL 110
LE + L+ +P S+ S L+ L++ ++P L L SL
Sbjct: 129 LETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSL 188
Query: 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170
L + ++P + N L +L + + LS L P + L +L++ + P
Sbjct: 189 RLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYP 246
Query: 171 S 171
Sbjct: 247 P 247
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 7e-13
Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 5/112 (4%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
L+ + + + ++ L+ L+L P L L L +
Sbjct: 208 LKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGR-APLKRLILKDCSNL 266
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170
T+P ++ L L L LP ++ L V + +
Sbjct: 267 LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQ 318
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 14/135 (10%)
Query: 42 ICRFNGVSCWNGLENRILSLELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIP 97
+ + GL N L+ + L +P S+ + ++L+ L + + L +
Sbjct: 170 LASTDASGEHQGLVN------LQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALG 222
Query: 98 TQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS-YNRLSGPLPPQLSSLVRLK 156
+ P L LDL P G L L L + L LP + L +L+
Sbjct: 223 PAIHHL-PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-LPLDIHRLTQLE 280
Query: 157 QFSVAYNCLSGRIPS 171
+ + R+PS
Sbjct: 281 KLDLRGCVNLSRLPS 295
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 16/120 (13%)
Query: 60 SLELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
+ L Q P+ LQ + + L ++P + + F L +L L+ N
Sbjct: 80 QPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGL-MELPDTMQQ-FAGLETLTLARN 137
Query: 116 DLSGTIPHELGNCVYLNTLYLSY-NRL--------SGPLPPQLSSLVRLKQFSVAYNCLS 166
L +P + + L L + L S + LV L+ + + +
Sbjct: 138 PLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR 196
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 7e-11
Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 6/95 (6%)
Query: 63 LEEMNLSG-----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
LEE++L G P L+ L L + +P + + L LDL
Sbjct: 231 LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRL-TQLEKLDLRGCVN 289
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSL 152
+P + + + + + + +
Sbjct: 290 LSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 13/119 (10%), Positives = 23/119 (19%), Gaps = 22/119 (18%)
Query: 73 PESLQSCKSLQVLNLSTNNLFGKIPTQLCKW----------------FPYLVSLDLSNND 116
+ L + L +W + +
Sbjct: 5 HHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT 64
Query: 117 LSG--TIPHELGNCVYLN--TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
L + L L L P Q L L+ ++ L +P
Sbjct: 65 GRALKATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-ELPD 121
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 2e-14
Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 51/208 (24%)
Query: 294 GTTYKAMLLDGSML-AIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL-- 341
G Y+ + S+ A+K L + ++FL E + +KHPNL E P
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSV 399
+ ++M+ G L L + L + + + +L + +H+++++
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-----IHRDLAARN 141
Query: 400 ILVDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVV 435
LV E+ ++ DFG SRL GD S++ DV FGV+
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 436 LLELVT-GQKPFE-------INASEEGY 455
L E+ T G P+ E+ Y
Sbjct: 202 LWEIATYGMSPYPGIDLSQVYELLEKDY 229
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 4e-14
Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 51/207 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--V 342
G + L+ +AIK + + E+ F+ E + + L HP L + P+ V
Sbjct: 22 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSVI 400
++M +G L L + + L + L G+++L +H+++++
Sbjct: 82 TEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC-----VIHRDLAARNC 135
Query: 401 LVDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVL 436
LV E+ ++ DFG +R D S + DV FGV++
Sbjct: 136 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 195
Query: 437 LELVT-GQKPFE-------INASEEGY 455
E+ + G+ P+E + G+
Sbjct: 196 WEVFSEGKIPYENRSNSEVVEDISTGF 222
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 4e-14
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 55/207 (26%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLG--EKQFLLE---MKQVGLLKHPNL---------EK 339
G G+ +A+K + K + FL E M Q L+H NL EK
Sbjct: 207 GDVMLGDY-RGNKVAVKCI---KNDATAQAFLAEASVMTQ---LRHSNLVQLLGVIVEEK 259
Query: 340 PLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396
+Y +YM+ G+L L S G + L L+ L + +L +H++++
Sbjct: 260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLA 316
Query: 397 SSVILVDEDFDARIMDFGFSR--------------------LTNGDASLQKDVHGFGVVL 436
+ +LV ED A++ DFG ++ L S + DV FG++L
Sbjct: 317 ARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376
Query: 437 LELVT-GQKPFE-------INASEEGY 455
E+ + G+ P+ + E+GY
Sbjct: 377 WEIYSFGRVPYPRIPLKDVVPRVEKGY 403
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 5e-14
Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 51/207 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--V 342
G +A+K + + E +F E + + L HP L E P+ V
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSVI 400
+Y+SNG L + L S+G L+ L + G+++L H +H+++++
Sbjct: 82 TEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESHQ-----FIHRDLAARNC 135
Query: 401 LVDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVL 436
LVD D ++ DFG +R D S + DV FG+++
Sbjct: 136 LVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILM 195
Query: 437 LELVT-GQKPFE-------INASEEGY 455
E+ + G+ P++ + +G+
Sbjct: 196 WEVFSLGKMPYDLYTNSEVVLKVSQGH 222
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 8e-14
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 53/206 (25%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLG--EKQFLLEMKQVGLLKHPNL---------EKPLV 342
G G+ +A+K + K + FL E + L+H NL EK +
Sbjct: 35 GDVMLGDY-RGNKVAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 90
Query: 343 Y---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISS 397
Y +YM+ G+L L S G + L L+ L + +L ++ +H+++++
Sbjct: 91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-----FVHRDLAA 145
Query: 398 SVILVDEDFDARIMDFGFSR--------------------LTNGDASLQKDVHGFGVVLL 437
+LV ED A++ DFG ++ L S + DV FG++L
Sbjct: 146 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 205
Query: 438 ELVT-GQKPFE-------INASEEGY 455
E+ + G+ P+ + E+GY
Sbjct: 206 EIYSFGRVPYPRIPLKDVVPRVEKGY 231
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 1e-13
Identities = 45/212 (21%), Positives = 77/212 (36%), Gaps = 57/212 (26%)
Query: 294 GTTYKAMLLDGSML-AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------E 338
G + L + L A+K + + +FL E +KQ HPN+ +
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ---YSHPNIVRLIGVCTQK 184
Query: 339 KPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396
+P+ V + + G + L + G L + L++ AA G+ +L C+H++++
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLES---KCCIHRDLA 240
Query: 397 SSVILVDEDFDARIMDFGFSRLTNGDASLQK-------------------------DVHG 431
+ LV E +I DFG SR DV
Sbjct: 241 ARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 432 FGVVLLELVT-GQKPFE-------INASEEGY 455
FG++L E + G P+ E+G
Sbjct: 301 FGILLWETFSLGASPYPNLSNQQTREFVEKGG 332
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-13
Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 51/207 (24%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--V 342
G +AIK + + E +F+ E K + L H L ++P+ +
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSVI 400
+YM+NG L + L + L + + +L LH+++++
Sbjct: 98 TEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ-----FLHRDLAARNC 151
Query: 401 LVDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVHGFGVVL 436
LV++ ++ DFG SR D S + D+ FGV++
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 437 LELVT-GQKPFE-------INASEEGY 455
E+ + G+ P+E +G
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGL 238
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 19/117 (16%)
Query: 62 ELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
LE + S ++PE QS KSL V N + L P L L +SNN L
Sbjct: 92 HLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPL--------LEYLGVSNNQL 143
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
+P EL N +L + + N L LP SL + + N L +P N
Sbjct: 144 E-KLP-ELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFI---AAGNNQLE-ELPELQN 193
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 19/126 (15%)
Query: 51 WNGLENRILSLELEEMNLSGQVPESLQSC--KSLQVLNLSTNNLFGKIPTQLCKWFPYLV 108
W+ E + L+ C + L L+ L + L + P+L
Sbjct: 43 WSEWER---NAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL-----SSLPELPPHLE 94
Query: 109 SLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168
SL S N L+ +P + L + LS LPP L L V+ N L +
Sbjct: 95 SLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSD-LPPLLEYL------GVSNNQLE-K 145
Query: 169 IPSFFN 174
+P N
Sbjct: 146 LPELQN 151
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 17/130 (13%)
Query: 54 LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK----------- 102
+ N L L + ++P ++ KS + + P +
Sbjct: 8 VSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRD 67
Query: 103 -WFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVA 161
L+L+N LS ++P + L +L S N L+ LP SL L +
Sbjct: 68 CLDRQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPELPQSLKSLLVDNNN 122
Query: 162 YNCLSGRIPS 171
LS P
Sbjct: 123 LKALSDLPPL 132
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 33/126 (26%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 55 ENRILSL-----ELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFP 105
N + L LE + ++PE LQ+ L + N+L K+P
Sbjct: 162 NNSLKKLPDLPPSLEFIAAGNNQLEELPE-LQNLPFLTAIYADNNSL-KKLPDLPLS--- 216
Query: 106 YLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165
L S+ NN L EL N +L T+Y N L LP SL L L
Sbjct: 217 -LESIVAGNNIL--EELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDL 272
Query: 166 SGRIPS 171
S
Sbjct: 273 PELPQS 278
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 35/132 (26%), Positives = 49/132 (37%), Gaps = 29/132 (21%)
Query: 56 NRILSL-----ELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIP--------- 97
N + +L LE +N+ +PE QS L V + L P
Sbjct: 247 NLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASS 306
Query: 98 ---TQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVR 154
LC P L L++SNN L +P L L S+N L+ +P +L +
Sbjct: 307 NEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHLAE-VPELPQNLKQ 361
Query: 155 LKQFSVAYNCLS 166
L V YN L
Sbjct: 362 L---HVEYNPLR 370
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 32/136 (23%)
Query: 55 ENRILSL-----ELEEMNLSG----QVPESLQSCKSLQVLN---------------LSTN 90
N+++ L LE + S +VPE Q+ K L V L N
Sbjct: 326 NNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMN 385
Query: 91 NLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLS 150
+ ++P L L + N L P + + L ++ R+ P
Sbjct: 386 SHLAEVPELPQN----LKQLHVETNPLR-EFPDIPES---VEDLRMNSERVVDPYEFAHE 437
Query: 151 SLVRLKQFSVAYNCLS 166
+ +L+ ++
Sbjct: 438 TTDKLEDDVFEHHHHH 453
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 49/193 (25%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL--------EKP--LVYKYMSNGTLYSLL 355
AIK L + K+ L E + + +P++ L+ + M G L +
Sbjct: 48 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV 107
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415
+ + + L + A+G+++L +H+++++ +LV +I DFG
Sbjct: 108 REHKDN-IGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGL 163
Query: 416 SRLTNGDA-------------------------SLQKDVHGFGVVLLELVT-GQKPFE-- 447
++L + + Q DV +GV + EL+T G KP++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 448 -----INASEEGY 455
+ E+G
Sbjct: 224 PASEISSILEKGE 236
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 3e-12
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 11/112 (9%)
Query: 62 ELEEMNLSGQVPESLQSC--KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
EE V + +++C VLN+ + L +P L + +L + +N+L+
Sbjct: 20 PAEESRGRAAVVQKMRACLNNGNAVLNVGESGL-TTLPDCLPAH---ITTLVIPDNNLT- 74
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
++P L TL +S N+L+ LP L+ L FS L
Sbjct: 75 SLPALPPE---LRTLEVSGNQLTS-LPVLPPGLLELSIFSNPLTHLPALPSG 122
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 5e-12
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 13/94 (13%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
+N+ +P+ L + L + NNL T L P L +L++S N L+
Sbjct: 42 NAVLNVGESGLTTLPDCL--PAHITTLVIPDNNL-----TSLPALPPELRTLEVSGNQLT 94
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSL 152
++P + L+ L LP L L
Sbjct: 95 -SLPVLPPGLLELSIFSNPLTHLP-ALPSGLCKL 126
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 4e-10
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 17/113 (15%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
L ++ + G +P LQ L++S N L L L L NN L+
Sbjct: 123 LCKLWIFGNQLTSLPVLPPG---LQELSVSDNQL-----ASLPALPSELCKLWAYNNQLT 174
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
++P L L +S N+L+ LP S L +L ++ L
Sbjct: 175 -SLPMLPSG---LQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSG 222
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 8e-10
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 18/115 (15%)
Query: 54 LENRILSL-----ELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWF 104
NR+ SL L+E+ +SG +P L+ L +S N L T L
Sbjct: 209 YNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSE---LKELMVSGNRL-----TSLPMLP 260
Query: 105 PYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS 159
L+SL + N L+ +P L + T+ L N LS L + +S
Sbjct: 261 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYS 314
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 6e-12
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 13/124 (10%)
Query: 56 NRILSLE-------LEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLV 108
N + L ++L+ + L S++ L+ + NN+ ++
Sbjct: 68 NVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI-SRVSCSR---GQGKK 123
Query: 109 SLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSG 167
++ L+NN ++ + G + L L N + +S L+ ++ YN +
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY- 182
Query: 168 RIPS 171
+
Sbjct: 183 DVKG 186
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 73 PESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN 132
E Q+ ++ ++ ++L + L + + LDLS N LS +L L
Sbjct: 3 HEIKQNGNRYKIEKVTDSSL-KQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L LS N L L SL L+ + N +
Sbjct: 62 LLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQ 93
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 20/189 (10%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
NR ++ + +L + QS +++ L+LS N L +I F L L+LS+N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPL-SQISAADLAPFTKLELLNLSSN 68
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
L +L + L TL L+ N + +L ++ A N +S S G
Sbjct: 69 VLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRVSCSRGQG 121
Query: 176 AMKMDMLADSRLGG------ANLGS-KCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWL- 227
+ LA++++ + DL ++ + A ++ +L L L
Sbjct: 122 KKNIY-LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH---LNLQ 177
Query: 228 WNNLTRVSK 236
+N + V
Sbjct: 178 YNFIYDVKG 186
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 9/102 (8%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
LE +NL V + L+ L+LS+N L + + + + L NN L
Sbjct: 171 LEHLNLQYNFIYDVKGQVV-FAKLKTLDLSSNKL-AFMGPEFQS-AAGVTWISLRNNKLV 227
Query: 119 GTIPHELGNCVYLNTLYLSYNRLS-GPLPPQLSSLVRLKQFS 159
I L L L N G L S R++ +
Sbjct: 228 -LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA 268
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 7e-12
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 13/124 (10%)
Query: 56 NRILSLE-------LEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLV 108
N + L ++L+ + L S++ L+ + NN+ ++
Sbjct: 68 NVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI-SRVSCSR---GQGKK 123
Query: 109 SLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSG 167
++ L+NN ++ + G + L L N + +S L+ ++ YN +
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY- 182
Query: 168 RIPS 171
+
Sbjct: 183 DVKG 186
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYL 131
+ E Q+ ++ ++ ++L + L + + LDLS N LS +L L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSL-KQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L LS N L L SL L+ + N +
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYVQ 93
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 1e-10
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
NR ++ + +L + QS +++ L+LS N L L F L L+LS+N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP-FTKLELLNLSSN 68
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
L +L + L TL L+ N + +L ++ A N +S S G
Sbjct: 69 VLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRVSCSRGQG 121
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 26/119 (21%), Positives = 40/119 (33%), Gaps = 19/119 (15%)
Query: 56 NRILSLE----------LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLC 101
N I ++ LE +NL V + L+ L+LS+N L + +
Sbjct: 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVV-FAKLKTLDLSSNKL-AFMGPEFQ 211
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLS-GPLPPQLSSLVRLKQFS 159
+ + L NN L I L L L N G L S R++ +
Sbjct: 212 S-AAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA 268
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 15/132 (11%), Positives = 37/132 (28%), Gaps = 16/132 (12%)
Query: 56 NRILSLE--------LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW 103
N++ + + ++L + ++L+ ++L+ +L N L +
Sbjct: 201 NKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGF---HCGTLRDF 257
Query: 104 FPYLVSL-DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAY 162
F + ++ + C + P L+ LK+ A
Sbjct: 258 FSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHAL 317
Query: 163 NCLSGRIPSFFN 174
G
Sbjct: 318 LSGQGSETERLE 329
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-11
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 15/122 (12%)
Query: 55 ENRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWF 104
N+I L L + + +++ L++LN+ +N + + L
Sbjct: 230 NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQI--SDISVLNN-L 286
Query: 105 PYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNC 164
L SL L+NN L +G L TL+LS N ++ + P L+SL ++ A
Sbjct: 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD-IRP-LASLSKMDSADFANQV 344
Query: 165 LS 166
+
Sbjct: 345 IK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 63 LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+ ++ ++G + ++ +L+ LNL+ N + P L +L + N +
Sbjct: 46 ITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPL---SNLVKLTNLYIGTNKI-- 100
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
T L N L LYL+ + +S L++L ++ ++ N + N
Sbjct: 101 TDISALQNLTNLRELYLNEDNISD--ISPLANLTKMYSLNLGANHNLSDLSPLSN 153
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 2e-10
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 19/131 (14%)
Query: 55 ENRILSLE-------LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW 103
E+ I + + +NL L + L L ++ + + P
Sbjct: 119 EDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPI---AN 175
Query: 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
L SL L+ N + P L + L+ N+++ + P ++++ RL + N
Sbjct: 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD-ITP-VANMTRLNSLKIGNN 231
Query: 164 CLSGRIPSFFN 174
++ + N
Sbjct: 232 KITD-LSPLAN 241
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 4e-10
Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 17/129 (13%)
Query: 56 NRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFP 105
N+I + L + + +LQ+ +L+ L L+ +N+ P L
Sbjct: 76 NQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISP--LAN-LT 132
Query: 106 YLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165
+ SL+L N + L N LN L ++ +++ + P +++L L S+ YN +
Sbjct: 133 KMYSLNLGANHNL-SDLSPLSNMTGLNYLTVTESKVKD-VTP-IANLTDLYSLSLNYNQI 189
Query: 166 SGRIPSFFN 174
I +
Sbjct: 190 ED-ISPLAS 197
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 2e-09
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 20/131 (15%)
Query: 56 NRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIP--TQLCKW 103
N+I + L + + L + L L + TN + I L K
Sbjct: 209 NQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQI-SDINAVKDLTK- 266
Query: 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
L L++ +N +S L N LN+L+L+ N+L + L L ++ N
Sbjct: 267 ---LKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQN 321
Query: 164 CLSGRIPSFFN 174
++ I +
Sbjct: 322 HITD-IRPLAS 331
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 8e-08
Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 8/101 (7%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133
L ++ + + + L ++ ++ +I + L
Sbjct: 16 FPDADLAEGIRAVLQKASVTDVVT---QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEY 70
Query: 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
L L+ N+++ P LS+LV+L + N ++ I + N
Sbjct: 71 LNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-DISALQN 108
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 6e-04
Identities = 11/95 (11%), Positives = 29/95 (30%), Gaps = 11/95 (11%)
Query: 80 KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139
+L L N +F + L ++ + + L ++
Sbjct: 3 ATLATLPAPINQIFP------DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGE 54
Query: 140 RLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
+++ + L L+ ++ N ++ I N
Sbjct: 55 KVAS--IQGIEYLTNLEYLNLNGNQITD-ISPLSN 86
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 1e-11
Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 67 NLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126
SG + LQ L+LS N+L C W L SL+LS L +P L
Sbjct: 215 TPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273
Query: 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167
L+ L LSYNRL P L ++ S+ N
Sbjct: 274 A--KLSVLDLSYNRLDR--NPSPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 31/194 (15%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL----FGKIPTQLCKW-FPYLVSL 110
+ + L LE + ++G P L + L+ N+ +L +W P L L
Sbjct: 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVL 154
Query: 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPL-------PPQLSSLVRLKQFSVAYN 163
++ ++ L+TL LS N G P + +L L +
Sbjct: 155 SIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214
Query: 164 CLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVF 223
SG + +++ L DLS L A + L
Sbjct: 215 TPSGVCSALAAARVQLQGL---------------DLSHNSLRDAAGAPSCDWPSQLNS-- 257
Query: 224 GLWL-WNNLTRVSK 236
L L + L +V K
Sbjct: 258 -LNLSFTGLKQVPK 270
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 2/124 (1%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
L +L+L L S S LQVL+LS + I + +L +L L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI-QTIEDGAYQSLSHLSTLIL 83
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL-SGRIPS 171
+ N + L L L+ + L LK+ +VA+N + S ++P
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 172 FFNG 175
+F+
Sbjct: 144 YFSN 147
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 22/172 (12%)
Query: 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
++ + E+N ++P++L S + L+LS N L FP L LDLS ++
Sbjct: 10 ITYQCMELNFY-KIPDNLPF--STKNLDLSFNPLRHLGSYSFFS-FPELQVLDLSRCEIQ 65
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178
+ +L+TL L+ N + S L L++ L+
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 179 MDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN 230
+ L +++ + + F +L L L +N
Sbjct: 126 LKEL---------------NVAHNLIQSFKLPEYFSNLTNLEH---LDLSSN 159
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 10/117 (8%)
Query: 63 LEEMNLS-------GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
LE ++LS G +S SL+ L+LS N + + + L LD ++
Sbjct: 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLG-LEQLEHLDFQHS 406
Query: 116 DLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
+L + L L +S+ + L L+ +A N
Sbjct: 407 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 463
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 2/101 (1%)
Query: 76 LQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTL 134
S ++L L++S + + L L ++ N + L L
Sbjct: 417 FLSLRNLIYLDISHTHT-RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475
Query: 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
LS +L P +SL L+ ++A N L F+
Sbjct: 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDR 516
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 1/115 (0%)
Query: 49 SCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLV 108
S + L N ++ L++ + SL+VL ++ N+ + L
Sbjct: 415 SVFLSLRN-LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473
Query: 109 SLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
LDLS L P + L L ++ N+L L L++ + N
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 12/122 (9%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
N I SL + SLQ L NL + L L++++N
Sbjct: 86 NPIQSLA----------LGAFSGLSSLQKLVAVETNL-ASLENFPIGHLKTLKELNVAHN 134
Query: 116 DL-SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
+ S +P N L L LS N++ L L ++ +++ + +
Sbjct: 135 LIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 194
Query: 175 GA 176
GA
Sbjct: 195 GA 196
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 63 LEEMNLSG------QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
LE + ++G +P+ ++L L+LS L ++ L L++++N
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL-EQLSPTAFNSLSSLQVLNMASNQ 505
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLS 142
L L ++L N
Sbjct: 506 LKSVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-11
Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 49/193 (25%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL--------EKP--LVYKYMSNGTLYSLL 355
AIK L + K+ L E + + +P++ L+ + M G L +
Sbjct: 48 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV 107
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415
+ + + L + A+G+++L +H+++++ +LV +I DFG
Sbjct: 108 REHKDN-IGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGL 163
Query: 416 SRLTNGDA-------------------------SLQKDVHGFGVVLLELVT-GQKPFE-- 447
++L + + Q DV +GV + EL+T G KP++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 448 -----INASEEGY 455
+ E+G
Sbjct: 224 PASEISSILEKGE 236
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
+++ +L+ + + + + ++ +L +N S N L P K LV + ++NN
Sbjct: 46 DQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQLTDITP---LKNLTKLVDILMNNN 100
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
++ P L N L L L N+++ P L +L L + ++ N +S I +
Sbjct: 101 QIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-ISALSG 154
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 6e-10
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 56 NRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFP 105
N++ + L +++L+ L L L L N + P
Sbjct: 231 NQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLT--- 287
Query: 106 YLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165
L +L+L+ N L P + N L L L +N +S P +SSL +L++ N +
Sbjct: 288 ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV 343
Query: 166 SGRIPSFFN 174
S + S N
Sbjct: 344 SD-VSSLAN 351
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 11/142 (7%)
Query: 33 SLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL 92
L ++++ N + L + L + N++ S + L +
Sbjct: 2 PLGSATITQDTPINQIFTDTALAE-KMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGI 58
Query: 93 FGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSL 152
K + L ++ SNN L+ P L N L + ++ N+++ P L++L
Sbjct: 59 --KSIDGVEY-LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANL 111
Query: 153 VRLKQFSVAYNCLSGRIPSFFN 174
L ++ N ++ I N
Sbjct: 112 TNLTGLTLFNNQITD-IDPLKN 132
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 19/130 (14%)
Query: 55 ENRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWF 104
N+I ++ L + LS +L SLQ L+ N + P
Sbjct: 121 NNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANLTT- 178
Query: 105 PYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNC 164
L LD+S+N +S L L +L + N++S + P L L L + S+ N
Sbjct: 179 --LERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD-ITP-LGILTNLDELSLNGNQ 232
Query: 165 LSGRIPSFFN 174
L I + +
Sbjct: 233 LKD-IGTLAS 241
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 15/121 (12%)
Query: 56 NRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFP 105
N I + L+ + SL + ++ L+ N + P
Sbjct: 319 NNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPL---ANLT 375
Query: 106 YLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165
+ L L++ + + N NT+ L P +S + + +N
Sbjct: 376 RITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI--APATISDGGSYTEPDITWNLP 433
Query: 166 S 166
S
Sbjct: 434 S 434
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 10/111 (9%), Positives = 26/111 (23%), Gaps = 7/111 (6%)
Query: 63 LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+ ++ L + + L L+ P ++ L
Sbjct: 355 INWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN-APVNYKANVSIPNTVKNVTGAL-- 411
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170
P + + +++N S + + SG +
Sbjct: 412 IAPATISDGGSYTEPDITWNLPSY-TNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 3/121 (2%)
Query: 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
L L + S + LQ+L L + I + + P L LDL ++ +
Sbjct: 26 TERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ--LSSLVRLKQFSVAYNCLSG-RIPSFFN 174
P +L L L + LS + +L L + ++ N + + F
Sbjct: 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG 145
Query: 175 G 175
Sbjct: 146 K 146
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 5e-10
Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 6/166 (3%)
Query: 28 KLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSG-QVPESLQSCKSLQVLN 86
L++ S N + + + L E L + L LQ+L
Sbjct: 373 ALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILI 432
Query: 87 LSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVY-----LNTLYLSYNRL 141
L+ N Q P L L L N L EL V+ L LYL++N L
Sbjct: 433 LNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492
Query: 142 SGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRL 187
+ P S L L+ S+ N L+ + +++ ++ ++L
Sbjct: 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQL 538
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 3/131 (2%)
Query: 54 LENRILSLELEEMNLSGQVPESLQSCK--SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111
L + I+ N+ + S++ L+LS +F + +++ + L L+
Sbjct: 238 LAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF-SLNSRVFETLKDLKVLN 296
Query: 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
L+ N ++ L L LSYN L L ++ + N ++
Sbjct: 297 LAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQ 356
Query: 172 FFNGAMKMDML 182
F K+ L
Sbjct: 357 TFKFLEKLQTL 367
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 43/211 (20%), Positives = 67/211 (31%), Gaps = 24/211 (11%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL-FGKIPTQLCKWFPYLVSLDLSN 114
++I L P++ Q L L L L + + L LDLS
Sbjct: 83 SKIYFLH----------PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSK 132
Query: 115 NDLSGTIPH-ELGNCVYLNTLYLSYNRLSGPLPPQLSSL--VRLKQFSVAYNCLSGRIPS 171
N + H G L ++ S N++ +L L L FS+A N L R+
Sbjct: 133 NQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSV 192
Query: 172 FFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNL 231
+ M N+ + D+S I G F A S F L L +++
Sbjct: 193 DWGKCMNPF---------RNMVLEILDVSGNGWTVDI-TGNFSNAISKSQAFSLILAHHI 242
Query: 232 TRVSKRRKRGYEFDDCWVERLGVHKLVEVSL 262
+ D L + + L
Sbjct: 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDL 273
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 16/168 (9%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L L ++ E+ +LQVLNLS NL G++ + P + +DL N ++
Sbjct: 294 VLNLAYNKINKIADEAFYGLDNLQVLNLS-YNLLGELYSSNFYGLPKVAYIDLQKNHIAI 352
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179
L TL L N L+ + + + ++ N L +P A +
Sbjct: 353 IQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLV-TLPKINLTANLI 406
Query: 180 DMLADSRLGGANLGSKCC--------DLSKKKLAAIIAAGAFGAAPSL 219
L+++RL ++ L++ + ++ PSL
Sbjct: 407 H-LSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL 453
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 30/155 (19%), Positives = 48/155 (30%), Gaps = 18/155 (11%)
Query: 78 SCK-SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136
SC ++ NL ++P L L LS N + L L L
Sbjct: 1 SCSFDGRIAFYRFCNLT-QVPQVL----NTTERLLLSFNYIRTVTASSFPFLEQLQLLEL 55
Query: 137 SYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML--ADSRLGGANLG 193
+ + +L L+ + + + P F G + L L A L
Sbjct: 56 GSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLK 115
Query: 194 SKCC---------DLSKKKLAAIIAAGAFGAAPSL 219
DLSK ++ ++ +FG SL
Sbjct: 116 DGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSL 150
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 5e-05
Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 21/137 (15%)
Query: 60 SLELEEMNLSGQVPESLQS--CKSLQVLNLSTNNLFGKIPTQLCKWF-----PYLVSLDL 112
S++ + L+ K+L +L+ N+L+ ++ K L LD+
Sbjct: 152 SIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDV 211
Query: 113 SNNDLSGTIPHELGNCV------------YLNTLYLSYNRLSGPLPPQLSSLVR--LKQF 158
S N + I N + ++ ++ + P + L R ++
Sbjct: 212 SGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHL 271
Query: 159 SVAYNCLSGRIPSFFNG 175
+++ + F
Sbjct: 272 DLSHGFVFSLNSRVFET 288
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 5e-11
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 30/132 (22%)
Query: 52 NGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111
L N+ L+L +NLS +P++L + VL ++ N L +P L LD
Sbjct: 55 ECLINQFSELQLNRLNLS-SLPDNL--PPQITVLEITQNAL-ISLPELPAS----LEYLD 106
Query: 112 LSNNDLSGTIPHELGNCVYLN-----------------TLYLSYNRLSGPLPPQLSSLVR 154
+N LS T+P + +L+ + N+L+ LP +SL
Sbjct: 107 ACDNRLS-TLPELPASLKHLDVDNNQLTMLPELPALLEYINADNNQLTM-LPELPTSLEV 164
Query: 155 LKQFSVAYNCLS 166
L SV N L+
Sbjct: 165 L---SVRNNQLT 173
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 60.8 bits (147), Expect = 6e-10
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 17/113 (15%)
Query: 56 NRILSL-----ELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWF-- 104
N++ L LE +++ +PE +S L+ L++S NL +P +
Sbjct: 150 NQLTMLPELPTSLEVLSVRNNQLTFLPELPES---LEALDVS-TNLLESLPAVPVRNHHS 205
Query: 105 -PYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLK 156
+ N ++ IP + + T+ L N LS + LS
Sbjct: 206 EETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQP 257
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 5e-11
Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 53/195 (27%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL--------EKPL--VYKYMSNGTLYSLL 355
IK + + + + M +G L H ++ L V +Y+ G+L +
Sbjct: 46 CIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHV 105
Query: 356 HSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSVILVDEDFDARIMDF 413
+ L L G+ A+G+ +L H +H+N+++ +L+ ++ DF
Sbjct: 106 RQHRGA-LGPQLLLNWGVQIAKGMYYLEEHGM-----VHRNLAARNVLLKSPSQVQVADF 159
Query: 414 GFSRLTNGDA-------------------------SLQKDVHGFGVVLLELVT-GQKPFE 447
G + L D + Q DV +GV + EL+T G +P+
Sbjct: 160 GVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219
Query: 448 -------INASEEGY 455
+ E+G
Sbjct: 220 GLRLAEVPDLLEKGE 234
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-10
Identities = 41/200 (20%), Positives = 69/200 (34%), Gaps = 57/200 (28%)
Query: 294 GTTYKA--MLLDGSMLAIKRLSACKLGEKQFLL----EMKQVGLLKHPNL--------EK 339
T Y A +L+ +AIK + +++ L E+ L H N+ E
Sbjct: 25 STVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED 83
Query: 340 PLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-----HCCHPPCL 391
Y +Y+ TL + S+G L + + G+ H H P
Sbjct: 84 DCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKP-- 139
Query: 392 HQNISSSVILVDEDFDARIMDFGFSRLTN------------------------GDASLQK 427
QNI L+D + +I DFG ++ +
Sbjct: 140 -QNI-----LIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 428 DVHGFGVVLLELVTGQKPFE 447
D++ G+VL E++ G+ PF
Sbjct: 194 DIYSIGIVLYEMLVGEPPFN 213
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
GL + SL+L ++ L++C +LQVL L ++ + I L LDL
Sbjct: 23 GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRI-NTIEGDAFYSLGSLEHLDL 81
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
S+N LS G L L L N + +L L+ + I
Sbjct: 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 18/149 (12%)
Query: 43 CRFNGVSCWNGLENRILS-------LELEEMNLSGQV-----PESLQSCKSLQVLNLSTN 90
C NG+ +N E+ ++S + + +++ + ++ + + N
Sbjct: 261 CTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVE-N 319
Query: 91 NLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE---LGNCVYLNTLYLSYNRLS--GPL 145
+ +P + L LDLS N + G L TL LS N L
Sbjct: 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKT 379
Query: 146 PPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
L +L L ++ N S
Sbjct: 380 GEILLTLKNLTSLDISRNTFHPMPDSCQW 408
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 6/136 (4%)
Query: 63 LEEMNLSG------QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
L+ +NL G V + +LQ L + F +I L L++
Sbjct: 100 LKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176
L L + ++ L L + + L L ++ + L+ S
Sbjct: 160 LRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVD 219
Query: 177 MKMDMLADSRLGGANL 192
+ G+ L
Sbjct: 220 EVSSPMKKLAFRGSVL 235
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 3e-10
Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 22/160 (13%)
Query: 78 SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137
SC + V + + + IP+ L + SLDLS N ++ +L C L L L
Sbjct: 3 SCDASGVCDGRSRSFT-SIPSGL---TAAMKSLDLSFNKITYIGHGDLRACANLQVLILK 58
Query: 138 YNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKC 196
+R++ + SL L+ ++ N LS S+F + L
Sbjct: 59 SSRINT-IEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYL-------------- 103
Query: 197 CDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSK 236
+L + F +L + + + +
Sbjct: 104 -NLMGNPYQTLGVTSLFPNLTNL-QTLRIGNVETFSEIRR 141
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
L +++S +P+S Q + ++ LNLS+ + + T + L LD+SNN+L
Sbjct: 389 LTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGI-RVVKTCI---PQTLEVLDVSNNNLD 444
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178
+ L L LY+S N+L LP S L ++ N L F+
Sbjct: 445 -SFSLFLPR---LQELYISRNKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTS 498
Query: 179 MDML 182
+ +
Sbjct: 499 LQKI 502
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 56 NRILSLE---------LEEMNLSG----QVPES-LQSCKSLQVLNLSTNNLFGKIPTQLC 101
+RI ++E LE ++LS + S SL+ LNL N T L
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 102 KWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
L +L + N + I LN L + L L S+ + ++
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179
Query: 161 AYNCLSGRIPSFFNG 175
+ + + F +
Sbjct: 180 HLSESAFLLEIFADI 194
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 17/147 (11%), Positives = 39/147 (26%), Gaps = 9/147 (6%)
Query: 28 KLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNL 87
+L +L + S L R L E N ++ + ++ +
Sbjct: 202 ELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDC 261
Query: 88 STNNLFGKIPTQLCKWFPYLVS--------LDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139
+ N L G L L + L + + + + +
Sbjct: 262 TLNGL-GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320
Query: 140 RLSGPLPPQLSSLVRLKQFSVAYNCLS 166
++ L L+ ++ N +
Sbjct: 321 KVFLVPCSFSQHLKSLEFLDLSENLMV 347
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
+ +NLS V + +L+VL++S NNL L P L L +S N L
Sbjct: 412 MRFLNLSSTGIRVVKTCIPQ--TLEVLDVSNNNL-DSFSLFL----PRLQELYISRNKLK 464
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
T+P + L + +S N+L L L++ + N
Sbjct: 465 -TLP-DASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 16/116 (13%), Positives = 31/116 (26%), Gaps = 2/116 (1%)
Query: 60 SLELEEMNLSGQVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
+L + + ++ SL L + +L +Q K + L L ++ +
Sbjct: 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL-RNYQSQSLKSIRDIHHLTLHLSESA 185
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
+ + L L L+ L S FN
Sbjct: 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 6/109 (5%)
Query: 63 LEEMNLSGQV-----PESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
L E+ + +SL+S + + L L + + + L+L + +L
Sbjct: 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES-AFLLEIFADILSSVRYLELRDTNL 208
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
+ L + + R S + L++L ++ + + +
Sbjct: 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE 257
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 10/83 (12%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
LE +++S L LQ L +S N L +P FP L+ + +S N L
Sbjct: 433 LEVLDVSNNNLDSFSLFL---PRLQELYISRNKL-KTLPD--ASLFPVLLVMKISRNQLK 486
Query: 119 GTIPHELGNCVYLNTLYLSYNRL 141
L ++L N
Sbjct: 487 SVPDGIFDRLTSLQKIWLHTNPW 509
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 57/198 (28%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
AIK L + + FL E M Q HPN+ + V +YM NG+L
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQ---FDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411
+ L ++ + + G G+ +L +H+++++ +LVD + ++
Sbjct: 138 DTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVS 193
Query: 412 DFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQK 444
DFG SR+ D S DV FGVV+ E++ G++
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 445 PFE-------INASEEGY 455
P+ I++ EEGY
Sbjct: 254 PYWNMTNRDVISSVEEGY 271
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 62.5 bits (151), Expect = 1e-10
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLC--KWFPYLVSLDLSN 114
R L+ + ++VL+L+ +L T LC + + LDLS+
Sbjct: 418 RAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDL-----TVLCHLEQLLLVTHLDLSH 472
Query: 115 NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
N L +P L L L S N L + +++L RL++ + N L
Sbjct: 473 NRLR-ALPPALAALRCLEVLQASDNALEN-VDG-VANLPRLQELLLCNNRLQ 521
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 4e-07
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 21/103 (20%)
Query: 55 ENRILSLE-------LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIP--TQLC 101
+ L + ++LS +P +L + + L+VL S N L + L
Sbjct: 450 HKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALE-NVDGVANLP 508
Query: 102 KWFPYLVSLDLSNNDLSGTIPH--ELGNCVYLNTLYLSYNRLS 142
+ L L L NN L L +C L L L N L
Sbjct: 509 R----LQELLLCNNRLQ-QSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 4/118 (3%)
Query: 50 CWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVS 109
+ L + LE+ + + +L L+++ NL +P + YL
Sbjct: 195 SFKRLYR-LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL-TAVPYLAVRHLVYLRF 252
Query: 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLS 166
L+LS N +S L + L + L +L+ + P L L+ +V+ N L+
Sbjct: 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFRGLNYLRVLNVSGNQLT 309
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 40/198 (20%), Positives = 62/198 (31%), Gaps = 32/198 (16%)
Query: 43 CRFNGVSCWN--------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG 94
+ V C G+ L+L + + + S L+ L L+ N +
Sbjct: 11 AQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV-S 69
Query: 95 KIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLV 153
+ L +L L +N L IP L L +S N++ L L
Sbjct: 70 AVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 128
Query: 154 RLKQFSVAYNCLSGRIPS-FFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGA 212
LK V N L I F+G ++ L L K L + I A
Sbjct: 129 NLKSLEVGDNDLV-YISHRAFSGLNSLEQL---------------TLEKCNLTS-IPTEA 171
Query: 213 FGAAPSLMLVFGLWLWNN 230
L++ L L +
Sbjct: 172 LSHLHGLIV---LRLRHL 186
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 33/199 (16%), Positives = 62/199 (31%), Gaps = 37/199 (18%)
Query: 55 ENRILSLE---------LEEMNLSG----QVPE-SLQSCKSLQVLNLSTNNLFGKIPTQL 100
EN+I+ L L+ + + + + SL+ L L NL IPT+
Sbjct: 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL-TSIPTEA 171
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
L+ L L + +++ + L L +S+ + P + L S+
Sbjct: 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 231
Query: 161 AYNCLSGRIPSF-FNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSL 219
+ L+ +P + + L +LS ++ I L
Sbjct: 232 THCNLT-AVPYLAVRHLVYLRFL---------------NLSYNPIST-IEGSMLHELLRL 274
Query: 220 MLVFGLWLWNN-LTRVSKR 237
+ L L V
Sbjct: 275 Q---EIQLVGGQLAVVEPY 290
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 39/180 (21%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
++ VPE + + ++L+L N + + FP+L L+L+ N +S
Sbjct: 14 RAVLCHRKRFV-AVPEGIPT--ETRLLDLGKNRI-KTLNQDEFASFPHLEELELNENIVS 69
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPSFFNGAM 177
P N L TL L NRL +P + L L + ++ N + + F
Sbjct: 70 AVEPGAFNNLFNLRTLGLRSNRLKL-IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 128
Query: 178 KMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWL-WNNLTRVSK 236
+ L ++ L I+ AF SL L L NLT +
Sbjct: 129 NLKSL---------------EVGDNDLVY-ISHRAFSGLNSLEQ---LTLEKCNLTSIPT 169
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 58/213 (27%)
Query: 294 GTTYKAMLLDGSML----AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL------- 337
G Y+ + + A+K +++F+ E MK L HP++
Sbjct: 26 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN---LDHPHIVKLIGII 82
Query: 338 -EKP--LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
E+P ++ + G L L N N+ L + + L + +++L C+H++
Sbjct: 83 EEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESIN---CVHRD 138
Query: 395 ISSSVILVDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVH 430
I+ ILV ++ DFG SR + + DV
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVW 198
Query: 431 GFGVVLLELVT-GQKPFE-------INASEEGY 455
F V + E+++ G++PF I E+G
Sbjct: 199 MFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 50/217 (23%), Positives = 82/217 (37%), Gaps = 62/217 (28%)
Query: 294 GTTYKAMLLDGSML-----AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL------ 337
G YK ML S AIK L + FL E M Q H N+
Sbjct: 58 GEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ---FSHHNIIRLEGV 114
Query: 338 ---EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392
KP+ + +YM NG L L + + G A G+ +L + +H
Sbjct: 115 ISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMN---YVH 170
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDA--------------------------SLQ 426
+++++ ILV+ + ++ DFG SR+ D +
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA 230
Query: 427 KDVHGFGVVLLELVT-GQKPFE-------INASEEGY 455
DV FG+V+ E++T G++P+ + A +G+
Sbjct: 231 SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF 267
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 63/201 (31%)
Query: 308 AIKRLSACKLG-----EKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSN 348
AIK K+G + FL E M Q HPN+ KP+ V +YM N
Sbjct: 77 AIK---TLKVGYTEKQRRDFLGEASIMGQ---FDHPNIIRLEGVVTKSKPVMIVTEYMEN 130
Query: 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408
G+L S L + + + G A G+ +L +H+++++ IL++ +
Sbjct: 131 GSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
++ DFG R+ D + DV +G+VL E+++
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 442 GQKPFE-------INASEEGY 455
G++P+ I A +EGY
Sbjct: 247 GERPYWEMSNQDVIKAVDEGY 267
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 58/213 (27%)
Query: 294 GTTYKAMLLDGS----MLAIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL------- 337
G ++ + + +AIK ++FL E M+Q HP++
Sbjct: 404 GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ---FDHPHIVKLIGVI 460
Query: 338 -EKP--LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
E P ++ + + G L S L + LD S + + L++L +H++
Sbjct: 461 TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---FVHRD 516
Query: 395 ISSSVILVDEDFDARIMDFGFSRLTNGDA------------------------SLQKDVH 430
I++ +LV + ++ DFG SR + DV
Sbjct: 517 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576
Query: 431 GFGVVLLELVT-GQKPFE-------INASEEGY 455
FGV + E++ G KPF+ I E G
Sbjct: 577 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 54/201 (26%)
Query: 294 GTTYKAMLLDGS----MLAIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------E 338
G Y +D + AIK L + FL E + L HPN+
Sbjct: 35 GVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP 94
Query: 339 KPLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQ 393
+ L + YM +G L + S + GL ARG+ +L +H+
Sbjct: 95 EGLPHVLLPYMCHGDLLQFIRSPQRN-PTVKDLISFGLQVARGMEYLAEQKF-----VHR 148
Query: 394 NISSSVILVDEDFDARIMDFGFSR---------------------------LTNGDASLQ 426
++++ ++DE F ++ DFG +R L + +
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK 208
Query: 427 KDVHGFGVVLLELVT-GQKPF 446
DV FGV+L EL+T G P+
Sbjct: 209 SDVWSFGVLLWELLTRGAPPY 229
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 3e-10
Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 60/199 (30%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL--------EKP--LVYKYMSNGTLY 352
AIK L K ++ + E M Q L +P + + LV + G L+
Sbjct: 41 AIKVLKQGTEKADTEEMMREAQIMHQ---LDNPYIVRLIGVCQAEALMLVMEMAGGGPLH 97
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSVILVDEDFDARI 410
L + + + + G+ +L + +H+++++ +L+ A+I
Sbjct: 98 KFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNF-----VHRDLAARNVLLVNRHYAKI 151
Query: 411 MDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQ 443
DFG S+ D S + DV +GV + E ++ GQ
Sbjct: 152 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211
Query: 444 KPFE-------INASEEGY 455
KP++ + E+G
Sbjct: 212 KPYKKMKGPEVMAFIEQGK 230
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 4e-10
Identities = 44/215 (20%), Positives = 77/215 (35%), Gaps = 62/215 (28%)
Query: 294 GTTYKAMLLDGS----MLAIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL------- 337
G ++ + + +AIK ++FL E M+Q HP++
Sbjct: 29 GDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ---FDHPHIVKLIGVI 85
Query: 338 -EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLH 392
E P+ + + + G L S L + LD S + + L++L +H
Sbjct: 86 TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKRF-----VH 139
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDA------------------------SLQKD 428
++I++ +LV + ++ DFG SR + D
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 199
Query: 429 VHGFGVVLLELVT-GQKPFE-------INASEEGY 455
V FGV + E++ G KPF+ I E G
Sbjct: 200 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 8e-10
Identities = 46/201 (22%), Positives = 73/201 (36%), Gaps = 54/201 (26%)
Query: 294 GTTYKAMLLDGS----MLAIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------- 337
G Y LLD A+K L QFL E + HPN+
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQ 393
E V YM +G L + + + + + GL A+G+ +L H +
Sbjct: 99 EGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQVAKGMKYLASKKFVH-----R 152
Query: 394 NISSSVILVDEDFDARIMDFGFSR---------------------------LTNGDASLQ 426
++++ ++DE F ++ DFG +R L + +
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 212
Query: 427 KDVHGFGVVLLELVT-GQKPF 446
DV FGV+L EL+T G P+
Sbjct: 213 SDVWSFGVLLWELMTRGAPPY 233
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 8/113 (7%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L L+ ++ SL+ +L L LS N++ + P+L L L+NN L
Sbjct: 196 ELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI-SAVDNGSLANTPHLRELHLNNNKLV- 253
Query: 120 TIPHELGNCVYLNTLYLSYNRLSG------PLPPQLSSLVRLKQFSVAYNCLS 166
+P L + Y+ +YL N +S P + S+ N +
Sbjct: 254 KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
L + ++ +P+ L SL L+L N + K+ K L L LS N +S
Sbjct: 173 LSYIRIADTNITTIPQGL--PPSLTELHLDGNKI-TKVDAASLKGLNNLAKLGLSFNSIS 229
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L N +L L+L+ N+L +P L+ ++ + N +S
Sbjct: 230 AVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNIS 276
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 39/163 (23%)
Query: 43 CRFNGVSCWN--------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTN---- 90
C V C + L L+L+ ++ ++ K+L L L N
Sbjct: 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 90
Query: 91 -------------------NLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVY 130
N ++P ++ L L + N+++ +
Sbjct: 91 ISPGAFAPLVKLERLYLSKNQLKELPEKM---PKTLQELRVHENEIT-KVRKSVFNGLNQ 146
Query: 131 LNTLYLSYNRL-SGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPS 171
+ + L N L S + + +L +A ++ IP
Sbjct: 147 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ 188
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 44/183 (24%), Positives = 70/183 (38%), Gaps = 34/183 (18%)
Query: 62 ELEEMNLSGQ----VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
L + S VP+ L +L+L N + +I K L +L L NN +
Sbjct: 32 HLRVVQCSDLGLEKVPKDLPP--DTALLDLQNNKI-TEIKDGDFKNLKNLHTLILINNKI 88
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPSF-FNG 175
S P V L LYLS N+L LP ++ +L L V N ++ ++ FNG
Sbjct: 89 SKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKTLQEL---RVHENEIT-KVRKSVFNG 143
Query: 176 AMKMDMLADSRLGGANLGSKCCDLSKKKLAAI-IAAGAFGAAPSLMLVFGLWL-WNNLTR 233
+M ++ +L L + I GAF L + + N+T
Sbjct: 144 LNQMIVV---------------ELGTNPLKSSGIENGAFQGMKKLSY---IRIADTNITT 185
Query: 234 VSK 236
+ +
Sbjct: 186 IPQ 188
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 11/89 (12%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNL-----FGKIPTQLCKWFPYLVSLDLS 113
L E++L+ +VP L K +QV+ L NN+ P + L
Sbjct: 242 LRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLF 301
Query: 114 NNDLSGT-IPHELGNCVY-LNTLYLSYNR 140
+N + I CVY + L +
Sbjct: 302 SNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 54/201 (26%)
Query: 294 GTTYKAMLLDGS----MLAIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------- 337
G Y LLD A+K L QFL E + HPN+
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 338 EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQ 393
E V YM +G L + + + + + GL A+G+ +L +H+
Sbjct: 163 EGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQVAKGMKFLASKKF-----VHR 216
Query: 394 NISSSVILVDEDFDARIMDFGFSR---------------------------LTNGDASLQ 426
++++ ++DE F ++ DFG +R L + +
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 276
Query: 427 KDVHGFGVVLLELVT-GQKPF 446
DV FGV+L EL+T G P+
Sbjct: 277 SDVWSFGVLLWELMTRGAPPY 297
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 42/217 (19%), Positives = 78/217 (35%), Gaps = 65/217 (29%)
Query: 294 GTTYKAMLLDGSML---AIKRL---SACKLGEKQFLLE---MKQVGLLKHPNL------- 337
GT K ++ A+K L + + + L E M+Q L +P +
Sbjct: 31 GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ---LDNPYIVRMIGIC 87
Query: 338 -EKP--LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLH 392
+ LV + G L L N + + + + + + G+ +L + +H
Sbjct: 88 EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNF-----VH 140
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDA--------------------------SLQ 426
+++++ +L+ A+I DFG S+ D S +
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Query: 427 KDVHGFGVVLLELVT-GQKPFE-------INASEEGY 455
DV FGV++ E + GQKP+ E+G
Sbjct: 201 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 37/201 (18%), Positives = 67/201 (33%), Gaps = 62/201 (30%)
Query: 308 AIKRL-SACKLGEKQFLLE---MKQVGLLKHPNL---------EKP--LVYKYMSNGTLY 352
+K L A + + F M + L H +L LV +++ G+L
Sbjct: 44 LLKVLDKAHRNYSESFFEAASMMSK---LSHKHLVLNYGVCVCGDENILVQEFVKFGSLD 100
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSVILVDEDFDAR- 409
+ L N N ++ +L + A + +L + +H N+ + IL+ + D +
Sbjct: 101 TYLKKNKNC-INILWKLEVAKQLAAAMHFLEENT-----LIHGNVCAKNILLIREEDRKT 154
Query: 410 -------IMDFGFSRLTNGDASLQK--------------------DVHGFGVVLLELVT- 441
+ D G S LQ+ D FG L E+ +
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
Query: 442 GQKPFE-------INASEEGY 455
G KP + E+ +
Sbjct: 215 GDKPLSALDSQRKLQFYEDRH 235
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 2e-09
Identities = 42/206 (20%), Positives = 71/206 (34%), Gaps = 63/206 (30%)
Query: 294 GTTYKA--MLLDGSMLAIKRLSACKLGEKQFLL----EMKQVGLLKHPNL---------- 337
+ A + +A+K L A + F L E + L HP +
Sbjct: 26 SEVHLARDLRDH-RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 84
Query: 338 --EKPLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-----HCCH 387
PL Y +Y+ TL ++H+ G + + + A + L++ H H
Sbjct: 85 TPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 388 PPCLHQNISSSVILVDEDFDARIMDFGFSR--------LTN------------------G 421
P NI ++ ++MDFG +R +T
Sbjct: 143 KP---ANI-----MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 422 DASLQKDVHGFGVVLLELVTGQKPFE 447
+ DV+ G VL E++TG+ PF
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFT 220
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 3e-09
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 56 NRILSLE----LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYL 107
N + +L +EE++ S V + L +L L NNL T +P L
Sbjct: 202 NLLSTLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNL---TDTAWLLNYPGL 256
Query: 108 VSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167
V +DLS N+L + H L LY+S NRL L + LK +++N L
Sbjct: 257 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH 315
Query: 168 RIPSFFN 174
+
Sbjct: 316 VERNQPQ 322
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 40 GFICRFNGVSCWN-GLENRILSLELEEMNLSGQVPESLQ--SCKSLQVLNLSTNNLFGKI 96
R C + L+ + ++ + V + + + +++ N+ K+
Sbjct: 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFK-NSTMRKL 66
Query: 97 PTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVR 154
P L F + L+L++ + I + LY+ +N + LPP ++
Sbjct: 67 PAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPL 124
Query: 155 LKQFSVAYNCLS 166
L + N LS
Sbjct: 125 LTVLVLERNDLS 136
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 3e-08
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 27/133 (20%)
Query: 56 NRILSLE---------LEEMNLSG----QVPES-LQSCKSLQVLNLSTNNLFGKIPTQLC 101
N + SL L +++S ++ + Q+ SLQ L LS+N L + L
Sbjct: 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THVDLSL- 190
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVA 161
P L ++S N LS L + + L S+N ++ P L L +
Sbjct: 191 --IPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSINVVRGPVNVELTIL---KLQ 240
Query: 162 YNCLSGRIPSFFN 174
+N L+ N
Sbjct: 241 HNNLT-DTAWLLN 252
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 9e-08
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 18/120 (15%)
Query: 56 NRILSL-------ELEEMNLSG----QVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKW 103
N + L E++LS ++ + L+ L +S N L +
Sbjct: 242 NNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL-VALNLYGQPI 300
Query: 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
P L LDLS+N L + L LYL +N + L S+ LK ++++N
Sbjct: 301 -PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKL--STHHTLKNLTLSHN 355
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 4e-09
Identities = 39/199 (19%), Positives = 72/199 (36%), Gaps = 60/199 (30%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL--------EKP--LVYKYMSNGTLY 352
AIK L K ++ + E M Q L +P + + LV + G L+
Sbjct: 367 AIKVLKQGTEKADTEEMMREAQIMHQ---LDNPYIVRLIGVCQAEALMLVMEMAGGGPLH 423
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPPCLHQNISSSVILVDEDFDARI 410
L + + + + G+ +L + +H+N+++ +L+ A+I
Sbjct: 424 KFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNF-----VHRNLAARNVLLVNRHYAKI 477
Query: 411 MDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQ 443
DFG S+ D S + DV +GV + E ++ GQ
Sbjct: 478 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537
Query: 444 KPFE-------INASEEGY 455
KP++ + E+G
Sbjct: 538 KPYKKMKGPEVMAFIEQGK 556
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 5e-09
Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 22/144 (15%)
Query: 322 FLLEMKQVGLLKHPNL--------EKPLVY---KYMSNGTLYSLLHSNGNTALDWPSRLR 370
L ++ + P + + +++ G+L + T+ +R
Sbjct: 78 TLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD----TSPSPVGAIR 133
Query: 371 IGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVH 430
A H S + V D D + DA+ Q D+
Sbjct: 134 AMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMP----DANPQDDIR 186
Query: 431 GFGVVLLELVTGQKPFEINASEEG 454
G G L L+ + P G
Sbjct: 187 GIGASLYALLVNRWPLPEAGVRSG 210
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 41/207 (19%), Positives = 71/207 (34%), Gaps = 59/207 (28%)
Query: 308 AIKRLSACKLGEKQ----FLLE---MKQVGLLKHPNL--------EKP--LVYKYMSNGT 350
A+K L L + + F+ E M L H NL P +V + G+
Sbjct: 50 AVKCLKPDVLSQPEAMDDFIREVNAMHS---LDHRNLIRLYGVVLTPPMKMVTELAPLGS 106
Query: 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410
L L + + R + A G+ +L +H+++++ +L+ +I
Sbjct: 107 LLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKI 162
Query: 411 MDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQ 443
DFG R + S D FGV L E+ T GQ
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 444 KPFEINASEEGYKGNLVNWIDQLSSSG 470
+P+ G G+ + + ++ G
Sbjct: 223 EPW------IGLNGSQI--LHKIDKEG 241
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 7e-09
Identities = 34/191 (17%), Positives = 60/191 (31%), Gaps = 27/191 (14%)
Query: 51 WNGLENRILS------LELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
N LEN L+L + +S +P+ L +L L+L N + I +
Sbjct: 156 GNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPE--TLNELHLDHNKI-QAIELED 212
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
+ L L L +N + L L L+L N+LS +P L L L+ +
Sbjct: 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYL 271
Query: 161 AYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAI-IAAGAFGAAPSL 219
N ++ ++ + G L + + F
Sbjct: 272 HTNNIT-KVGV--------NDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDR 322
Query: 220 MLVFGLWLWNN 230
+ + N
Sbjct: 323 LA---IQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 38/162 (23%)
Query: 43 CRFNGVSCWN--------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTN---- 90
C V C + + L+L+ ++S + + + L L L N
Sbjct: 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK 92
Query: 91 -------------------NLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVY 130
N +IP L LV L + +N + +P
Sbjct: 93 IHEKAFSPLRKLQKLYISKNHLVEIPPNL---PSSLVELRIHDNRIR-KVPKGVFSGLRN 148
Query: 131 LNTLYLSYNRL-SGPLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
+N + + N L + P ++L ++ L+ IP
Sbjct: 149 MNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPK 189
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 78 SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137
C L+V+ S L +P ++ P LDL NND+S + +L L L
Sbjct: 32 HC-HLRVVQCSDLGL-KAVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLV 86
Query: 138 YNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPS 171
N++S + + S L +L++ ++ N L IP
Sbjct: 87 NNKISK-IHEKAFSPLRKLQKLYISKNHLV-EIPP 119
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 7e-09
Identities = 39/205 (19%), Positives = 62/205 (30%), Gaps = 32/205 (15%)
Query: 43 CRFNGVSCWN--------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNL-F 93
C + C + G+ + LELE L L L+LS+N L F
Sbjct: 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSF 66
Query: 94 GKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ--LSS 151
+Q L LDLS N + T+ L L ++ L + S
Sbjct: 67 KGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MSEFSVFLS 124
Query: 152 LVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAG 211
L L +++ FNG +++L ++
Sbjct: 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVL---------------KMAGNSFQENFLPD 169
Query: 212 AFGAAPSLMLVFGLWL-WNNLTRVS 235
F +L L L L ++S
Sbjct: 170 IFTELRNLTF---LDLSQCQLEQLS 191
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 25/180 (13%)
Query: 63 LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
L+ ++LS + + + L+ L+ +NL + L+ LD+S+
Sbjct: 80 LKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 139
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPSFFNGAM 177
L L ++ N P + L L ++ L P+ FN
Sbjct: 140 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 199
Query: 178 KMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN-LTRVSK 236
+ +L + N S + + SL + L N + K
Sbjct: 200 SLQVL---NMSHNNFFS-------------LDTFPYKCLNSLQV---LDYSLNHIMTSKK 240
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 2/108 (1%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L++ + SL+VL ++ N+ + L LDLS L
Sbjct: 130 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE- 188
Query: 120 TIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
+ + L L +S+N L L+ + N +
Sbjct: 189 QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 27/161 (16%)
Query: 78 SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137
SC S + ++ L +PT + L+L +N L L L LS
Sbjct: 6 SC-SGTEIRCNSKGL-TSVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLS 60
Query: 138 YNRLS--GPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSK 195
N LS G LK +++N + + S F G +++ L
Sbjct: 61 SNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL------------- 106
Query: 196 CCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWL-WNNLTRVS 235
D L + F + +L+ L + +
Sbjct: 107 --DFQHSNLKQMSEFSVFLSLRNLIY---LDISHTHTRVAF 142
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 7e-09
Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 54/188 (28%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSL 354
AIK + +A +FL E + ++ +P + + M+ G L S
Sbjct: 59 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 118
Query: 355 LHSNGNTALDWPSR--------LRIGLGAARGLSWL--HHCCHPPCLHQNISSSVILVDE 404
L S + P +++ A G+++L + H +++++ +V E
Sbjct: 119 LRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH-----RDLAARNCMVAE 173
Query: 405 DFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVVLLEL 439
DF +I DFG +R L +G + DV FGVVL E+
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 440 VT-GQKPF 446
T ++P+
Sbjct: 234 ATLAEQPY 241
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 9e-09
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 56 NRILSLE----LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYL 107
N + +L +EE++ S V + L +L L NNL T +P L
Sbjct: 196 NLLSTLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNL---TDTAWLLNYPGL 250
Query: 108 VSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167
V +DLS N+L + H L LY+S NRL L + LK +++N L
Sbjct: 251 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL- 308
Query: 168 RIPSFF 173
+
Sbjct: 309 HVERNQ 314
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 6e-08
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 18/120 (15%)
Query: 56 NRILSL-------ELEEMNLSG----QVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKW 103
N + L E++LS ++ + L+ L +S N L +
Sbjct: 236 NNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL-VALNLYGQPI 294
Query: 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
P L LDLS+N L + L LYL +N + L S+ LK ++++N
Sbjct: 295 -PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKL--STHHTLKNLTLSHN 349
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 6e-08
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 27/133 (20%)
Query: 56 NRILSLE---------LEEMNLSG----QVP-ESLQSCKSLQVLNLSTNNLFGKIPTQLC 101
N + SL L +++S ++ ++ Q+ SLQ L LS+N L + L
Sbjct: 127 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THVDLSL- 184
Query: 102 KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVA 161
P L ++S N LS L + + L S+N ++ P L L +
Sbjct: 185 --IPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSINVVRGPVNVELTIL---KLQ 234
Query: 162 YNCLSGRIPSFFN 174
+N L+ N
Sbjct: 235 HNNLT-DTAWLLN 246
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 7e-08
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 63 LEEMNLSG----QVPES-LQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117
++++ + +P Q+ L VL L N+L +P + P L +L +SNN+L
Sbjct: 95 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNL 153
Query: 118 SGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
I + L L LS NRL+ + S + L +V+YN LS
Sbjct: 154 E-RIEDDTFQATTSLQNLQLSSNRLTH-VDL--SLIPSLFHANVSYNLLS 199
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 40 GFICRFNGVSCWN-GLENRILSLELEEMNLSGQVPESLQ--SCKSLQVLNLSTNNLFGKI 96
R C + L+ + ++ + V + + + +++ N+ K+
Sbjct: 2 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFK-NSTMRKL 60
Query: 97 PTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVR 154
P L F + L+L++ + I + LY+ +N + LPP ++
Sbjct: 61 PAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPL 118
Query: 155 LKQFSVAYNCLS 166
L + N LS
Sbjct: 119 LTVLVLERNDLS 130
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 25/99 (25%)
Query: 56 NRILSLE--------LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW 103
NR+++L L+ ++LS V + L+ L L +N +
Sbjct: 282 NRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLD-HNSIVTLKLST--- 337
Query: 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLS 142
L +L LS+ND +C L L+ + R +
Sbjct: 338 HHTLKNLTLSHNDW---------DCNSLRALFRNVARPA 367
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 42/198 (21%), Positives = 68/198 (34%), Gaps = 53/198 (26%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPN--------LEKPL 341
G DG IK ++ ++ K+ ++V +L HPN E
Sbjct: 38 GKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGS 97
Query: 342 VY---KYMSNGTLYSLLHSNGN------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392
+Y Y G L+ +++ LDW ++ L H LH
Sbjct: 98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI---------CLALKHVHDRKILH 148
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DV 429
++I S I + +D ++ DFG +R+ N L + D+
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDI 208
Query: 430 HGFGVVLLELVTGQKPFE 447
G VL EL T + FE
Sbjct: 209 WALGCVLYELCTLKHAFE 226
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 2e-08
Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Query: 43 CRFNGVSCWNGLEN--RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
+ +N + + L + +++ +L SL +L++S + I T++
Sbjct: 73 INNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI 132
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
P + S+DLS N I L L +L + ++ + + +L Q
Sbjct: 133 NT-LPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYA 188
Query: 161 AYNCLSG 167
+ G
Sbjct: 189 FSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 2e-08
Identities = 13/91 (14%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIP-TQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN 132
++ +++ L ++ + P + L L L + D++ L L
Sbjct: 60 TGIEYAHNIKDLTINNIHATNYNPISGLSN----LERLRIMGKDVTSDKIPNLSGLTSLT 115
Query: 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
L +S++ + ++++L ++ ++YN
Sbjct: 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYN 146
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 6e-07
Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 9/98 (9%)
Query: 80 KSLQVLNLSTNNLFGKIPTQLC--KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137
SL + L+ N+ T L ++ + L ++N + P + L L +
Sbjct: 44 NSLTYITLANINV-----TDLTGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIM 96
Query: 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175
++ P LS L L ++++ I + N
Sbjct: 97 GKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 59/193 (30%)
Query: 308 AIKRLSACKLGEKQ-FLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSLL 355
A+K L L ++ F E + + L+H ++ PL V++YM +G L L
Sbjct: 49 AVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
Query: 356 HSNGNTALDWPSR--------------LRIGLGAARGLSWL--HHCCHPPCLHQNISSSV 399
++G A+ L I A G+ +L H H +N
Sbjct: 109 RAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNC---- 164
Query: 400 ILVDEDFDARIMDFGFSR-LTNGDA------------------------SLQKDVHGFGV 434
LV + +I DFG SR + + D + + DV FGV
Sbjct: 165 -LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
Query: 435 VLLELVT-GQKPF 446
+L E+ T G++P+
Sbjct: 224 ILWEIFTYGKQPW 236
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 65/210 (30%)
Query: 294 GTTYKAMLLDGSML---AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL-------- 337
G KA + + AIKR+ A K + F E + ++G HPN+
Sbjct: 39 GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACE 96
Query: 338 -EKPL--VYKYMSNGTLYSLLHSNGNTALDWPSR--------------LRIGLGAARGLS 380
L +Y +G L L + D L ARG+
Sbjct: 97 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 156
Query: 381 WL--HHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR--------------------- 417
+L +H+++++ ILV E++ A+I DFG SR
Sbjct: 157 YLSQKQF-----IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE 211
Query: 418 -LTNGDASLQKDVHGFGVVLLELVT-GQKP 445
L + DV +GV+L E+V+ G P
Sbjct: 212 SLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 43/192 (22%), Positives = 72/192 (37%), Gaps = 45/192 (23%)
Query: 308 AIKRL-SACKLGEKQFLLEMKQVGLLKHPNL-----------EKP--LVYKYMSNGTLYS 353
A+K+L + ++ F E++ + L + + LV +Y+ +G L
Sbjct: 56 AVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD 115
Query: 354 LLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413
L + LD L +G+ +L C+H+++++ ILV+ + +I DF
Sbjct: 116 FLQRHRAR-LDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADF 171
Query: 414 GFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQKPF 446
G ++L D S Q DV FGVVL EL T K
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231
Query: 447 EINASEEGYKGN 458
+A G
Sbjct: 232 SPSAEFLRMMGC 243
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 3e-08
Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 67/210 (31%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSL 354
AIK L A ++F E L+HPN+ ++PL ++ Y S+G L+
Sbjct: 43 AIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEF 102
Query: 355 LHSNGNTALDWPSR--------------LRIGLGAARGLSWL--HHCCHPPCLHQNISSS 398
L + + + + A G+ +L HH H +++++
Sbjct: 103 LVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVH-----KDLATR 157
Query: 399 VILVDEDFDARIMDFGFSRL--------TNGDA-----------------SLQKDVHGFG 433
+LV + + +I D G R G++ S+ D+ +G
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 217
Query: 434 VVLLELVT-GQKPFE-------INASEEGY 455
VVL E+ + G +P+ +
Sbjct: 218 VVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 247
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 7/104 (6%)
Query: 66 MNLSGQV---PESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP 122
+ L+ ++ + + L+L + I L ++D S+N++ +
Sbjct: 2 VKLTAELIEQAAQYTNAVRDRELDLRGYKI-PVI-ENLGATLDQFDAIDFSDNEIR-KLD 58
Query: 123 HELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L TL ++ NR+ +L L + + N L
Sbjct: 59 G-FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 6e-06
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
Query: 61 LELEEMNLSGQ---VPESLQS-CKSLQVLNLSTNNLFGKIPTQLCKW--FPYLVSLDLSN 114
+ E++L G V E+L + ++ S N + +L + L +L ++N
Sbjct: 19 VRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEI-----RKLDGFPLLRRLKTLLVNN 73
Query: 115 NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQF 158
N + L L L+ N L +L L L
Sbjct: 74 NRICRIGEGLDQALPDLTELILTNNSLV-----ELGDLDPLASL 112
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 59/201 (29%)
Query: 294 GTTYKA--MLLDGSMLAIKRLSACKLGEKQFLL----EMKQVGLLKHPNL--------EK 339
G Y+A + + ++A+K +S + F E + G L+ P++
Sbjct: 48 GDVYEAEDTVRE-RIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID 106
Query: 340 PLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC--CH----PPC 390
+Y + ++ L ++L G L P + I L H H P
Sbjct: 107 GQLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKP-- 162
Query: 391 LHQNISSSVILVDEDFDARIMDFGFSR------------------------LTNGDASLQ 426
+NI LV D A ++DFG + + A+ +
Sbjct: 163 --ENI-----LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYR 215
Query: 427 KDVHGFGVVLLELVTGQKPFE 447
D++ VL E +TG P++
Sbjct: 216 ADIYALTCVLYECLTGSPPYQ 236
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 4e-08
Identities = 41/204 (20%), Positives = 68/204 (33%), Gaps = 56/204 (27%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEK---QFLLEMKQVGLLKHPN--------LEKP- 340
G K DG +L K L + E + E+ + LKHPN +++
Sbjct: 20 GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 79
Query: 341 ----LVYKYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHP 388
+V +Y G L S++ L ++L L H
Sbjct: 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL------TLALKECHRRSDG 133
Query: 389 PC--LHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK------------------- 427
LH+++ + + +D + ++ DFG +R+ N D S K
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 428 ----DVHGFGVVLLELVTGQKPFE 447
D+ G +L EL PF
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFT 217
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 12/112 (10%)
Query: 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSN 114
N I S+ + SL L+L I + L L+L
Sbjct: 156 NNPIESIP----------SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGM 205
Query: 115 NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
++ +P+ L V L L +S N P L LK+ V + +S
Sbjct: 206 CNIK-DMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS 255
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 49 SCWNGLENRILSLELEEMNLSGQVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKWF--- 104
+N + + ++ L+L E+ + E + + +L+ LNL N+ +P
Sbjct: 165 YAFNRVPS-LMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-----LTPL 217
Query: 105 PYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYN 163
L L++S N P L L++ +++S + L L + ++A+N
Sbjct: 218 VGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-IERNAFDGLASLVELNLAHN 276
Query: 164 CLSGRIPSFFNG 175
LS F
Sbjct: 277 NLSSLPHDLFTP 288
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L L E N+ ++ + L+VL L N++ +I L +L+L +N L+
Sbjct: 79 YLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI-RQIEVGAFNGLASLNTLELFDNWLT- 136
Query: 120 TIPHE-LGNCVYLNTLYLSYNRLSGPLPPQ----LSSLVRL 155
IP L L+L N + +P + SL+RL
Sbjct: 137 VIPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRL 176
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 28/158 (17%), Positives = 48/158 (30%), Gaps = 27/158 (17%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNR 140
+ + L ++P + L+L N++ + +L L L N
Sbjct: 55 QFSKVVCTRRGLS-EVPQGI---PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 141 LSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDL 199
+ + + L L + N L+ F + L + L + S
Sbjct: 111 IRQ-IEVGAFNGLASLNTLELFDNWLTVIPSGAFEY---LSKLRELWLRNNPIES----- 161
Query: 200 SKKKLAAIIAAGAFGAAPSLMLVFGLWL--WNNLTRVS 235
I + AF PSLM L L L +S
Sbjct: 162 --------IPSYAFNRVPSLMR---LDLGELKKLEYIS 188
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 58/192 (30%)
Query: 308 AIKRLSACKLGEKQ-FLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSLL 355
A+K L +Q F E + + +L+H ++ +PL V++YM +G L L
Sbjct: 75 AVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
Query: 356 HSNGNTALDWPSR-------------LRIGLGAARGLSWL--HHCCHPPCLHQNISSSVI 400
S+G A L + A G+ +L H H +N
Sbjct: 135 RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC----- 189
Query: 401 LVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVV 435
LV + +I DFG SR + + + DV FGVV
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 436 LLELVT-GQKPF 446
L E+ T G++P+
Sbjct: 250 LWEIFTYGKQPW 261
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 39/190 (20%), Positives = 61/190 (32%), Gaps = 58/190 (30%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSL 354
A+K L + E FL+E + H N+ P + + M+ G L S
Sbjct: 64 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF 123
Query: 355 LHSNG-----NTALDWPSRLRIGLGAARGLSWL--HHCCHPP-----CLHQNISSSVILV 402
L ++L L + A G +L +H H CL +
Sbjct: 124 LRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL-------LTCP 176
Query: 403 DEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVVLL 437
A+I DFG +R G + + D FGV+L
Sbjct: 177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236
Query: 438 ELVT-GQKPF 446
E+ + G P+
Sbjct: 237 EIFSLGYMPY 246
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 4e-08
Identities = 50/343 (14%), Positives = 112/343 (32%), Gaps = 92/343 (26%)
Query: 226 WLWNNLTRVSKRRKRGYE-FDDCWVERL--GVHKLVEVSLF-LKPLIKLK--LVHLIAAT 279
+L + + ++ + + +RL + ++ L+P +KL+ L+ L
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIEQ-RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR--- 148
Query: 280 SNFSAQNVLVSTWTGTTYKAMLLDG-SMLAIKRLSA----CKLGEKQFLLEMKQVGLLKH 334
A+NVL+ G +L G + +A+ + CK+ K F L +K
Sbjct: 149 ---PAKNVLID---G-----VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN---- 193
Query: 335 PNLEKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARG--LSWLHHCCHPPCLH 392
V + + L + N + D S +++ + + + L + CL
Sbjct: 194 ---SPETVLEMLQK--LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL- 247
Query: 393 QNISSSVILVDEDFDARIMD-FGFS-R--LTNGDASLQKDVHGFGVVLLELVTGQKPFEI 448
++L +A+ + F S + LT + + + L
Sbjct: 248 ------LVL-LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP 300
Query: 449 NASEEGYKGNLVNWIDQLSSSGRIKD-----------VIDKALTGKGYDDEIL---QFLQ 494
+ + L+ ++D R +D + ++ + D + +
Sbjct: 301 DEVKS----LLLKYLDC-----RPQDLPREVLTTNPRRL--SIIAESIRDGLATWDNWKH 349
Query: 495 IACK--------CVAV-RPKEKWSMYQVYISLCSIAEQLGFSE 528
+ C + V P E +++ L S+ F
Sbjct: 350 VNCDKLTTIIESSLNVLEPAE---YRKMFDRL-SV-----FPP 383
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 86/552 (15%), Positives = 160/552 (28%), Gaps = 177/552 (32%)
Query: 27 GKLSSWSLTNSSV---GFICRFNGVSCWNGLENRILSLELEEMNLSGQV--PESLQSCKS 81
GK +W + C+ + W +NL PE++
Sbjct: 162 GK--TW-VALDVCLSYKVQCKMDFKIFW--------------LNL-KNCNSPETV----- 198
Query: 82 LQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRL 141
L++L L +I S +D S I ++++ RL
Sbjct: 199 LEMLQ----KLLYQIDPNWT-----------SRSDHSSNIKLR------IHSIQAELRRL 237
Query: 142 --SGPLPPQLSSL--VR----LKQFSVAYNC---LSGR---IPSFFNGAMKMDMLADSRL 187
S P L L V+ F++ +C L+ R + F + A + D
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNL--SCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 188 GG------ANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWL------WNNLTRVS 235
+L K D + L + P + + + W+N V+
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTT----NPRRLSIIAESIRDGLATWDNWKHVN 351
Query: 236 KRRKRGYEFDDCWVERLGVHKLVEVSL-FLKPLIKLKLVHLIA---ATSNFSAQNVLVST 291
+ + ++E SL L+P K+ ++ +++ +L
Sbjct: 352 CDK---------------LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI-LLSLI 395
Query: 292 WTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTL 351
W M+ + +L K L+E K P K ++
Sbjct: 396 WFDVIK-----SDVMVVVNKL------HKYSLVE-------KQP---KESTI------SI 428
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD----EDFD 407
S+ L + LH++I + +D
Sbjct: 429 PSIY-----------------------LELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 408 ARIMD------FGFSRLTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN 461
+D G L N + + F +V L+ ++ +++ G+++N
Sbjct: 466 PPYLDQYFYSHIGH-HLKN--IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522
Query: 462 WIDQLSSSGRIKDVI-DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520
+ QL K I D + + IL FL + + K Y L I
Sbjct: 523 TLQQLK---FYKPYICDNDPKYERLVNAILDFLP-KIEENLICSK--------YTDLLRI 570
Query: 521 AEQLGFSEFYEE 532
A +EE
Sbjct: 571 ALMAEDEAIFEE 582
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 22/131 (16%), Positives = 36/131 (27%), Gaps = 11/131 (8%)
Query: 43 CRFNGVSCWN-GLE------NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGK 95
C N GL + ++L +++ S + LQ L +
Sbjct: 10 VIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69
Query: 96 IPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYNRL-SGPLPPQL-SSL 152
I + L+ L L N + L L L+ L L L
Sbjct: 70 IRNNTFRGLSSLIILKLDYNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPL 128
Query: 153 VRLKQFSVAYN 163
L+ + N
Sbjct: 129 TSLEMLVLRDN 139
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYN 139
++ +LS + +F + + F L L L+ N+++ I +L L LS N
Sbjct: 276 GVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQN 333
Query: 140 RLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPS 171
L + ++ +L +L+ ++YN + +
Sbjct: 334 FLGS-IDSRMFENLDKLEVLDLSYNHIR-ALGD 364
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 35/165 (21%), Positives = 53/165 (32%), Gaps = 23/165 (13%)
Query: 80 KSLQVLNLSTNNLFGKIPTQLCK------WFPYLVSLDLSNNDLSGTIPHELG------- 126
+ VL+L+ N + +C+ + L LS+ L + LG
Sbjct: 154 RRFHVLDLTFNKV-----KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208
Query: 127 -NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADS 185
+ TL LS N + + + + S + S F D +
Sbjct: 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268
Query: 186 RLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN 230
G G K CDLSK K+ A + F L L L N
Sbjct: 269 FKGLEASGVKTCDLSKSKIFA-LLKSVFSHFTDLEQ---LTLAQN 309
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 49 SCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLV 108
+ + + + +L + + + L+ L L+ N + KI +L+
Sbjct: 268 TFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEI-NKIDDNAFWGLTHLL 326
Query: 109 SLDLSNNDLSGTIPHEL-GNCVYLNTLYLSYNRLSGPLPPQL-SSLVRLKQFSVAYNCLS 166
L+LS N L +I + N L L LSYN + L Q L LK+ ++ N L
Sbjct: 327 KLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIRA-LGDQSFLGLPNLKELALDTNQLK 384
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 49 SCWNGLENRILSLELEEMNLSGQVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKWF--- 104
+N + + + L+L E+ + E + + +L+ LNL+ NL +IP
Sbjct: 154 YAFNRIPS-LRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL-REIPN-----LTPL 206
Query: 105 PYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYN 163
L LDLS N LS P ++L L++ +++ + +L L + ++A+N
Sbjct: 207 IKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV-IERNAFDNLQSLVEINLAHN 265
Query: 164 CLS 166
L+
Sbjct: 266 NLT 268
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
N+ + NL +VP+ + + + ++LNL N + I K +L L LS N
Sbjct: 43 NQFSKVICVRKNLR-EVPDGIST--NTRLLNLHENQI-QIIKVNSFKHLRHLEILQLSRN 98
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPS 171
+ LNTL L NRL+ +P L +LK+ + N + IPS
Sbjct: 99 HIRTIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRNNPIE-SIPS 153
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 9e-06
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 17/122 (13%)
Query: 56 NRILSLE---------LEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102
R+ + L +NL+ ++P +L L L+LS N+L I +
Sbjct: 171 KRLSYISEGAFEGLSNLRYLNLAMCNLREIP-NLTPLIKLDELDLSGNHL-SAIRPGSFQ 228
Query: 103 WFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVA 161
+L L + + + + N L + L++N L+ LP + L L++ +
Sbjct: 229 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL-LPHDLFTPLHHLERIHLH 287
Query: 162 YN 163
+N
Sbjct: 288 HN 289
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 45/196 (22%)
Query: 303 DGSMLAIKRLSACKLGEKQ-FLLEMKQVGLLKHPNL-----------EKP--LVYKYMSN 348
G ++A+K+L + F E++ + L+H N+ + L+ +Y+
Sbjct: 69 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128
Query: 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408
G+L L + +D L+ +G+ +L +H+++++ ILV+ +
Sbjct: 129 GSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 184
Query: 409 RIMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT- 441
+I DFG +++ D S+ DV FGVVL EL T
Sbjct: 185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 244
Query: 442 GQKPFEINASEEGYKG 457
+K A G
Sbjct: 245 IEKSKSPPAEFMRMIG 260
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 7e-08
Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 74/222 (33%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
A+K L +A ++ + E M +G +H N+ P+ + +Y G L
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLG--QHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 352 YSLLHSNGNTALDWPSR------------LRIGLGAARGLSWL--HHCCHPPCLHQNISS 397
+ L P+ L A+G+++L +C +H+++++
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC-----IHRDVAA 192
Query: 398 SVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGF 432
+L+ A+I DFG +R + + ++Q DV +
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 433 GVVLLELVT-GQKPFEINASEEGYKGNLVNW--IDQLSSSGR 471
G++L E+ + G P Y G LVN + +
Sbjct: 253 GILLWEIFSLGLNP---------YPGILVNSKFYKLVKDGYQ 285
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 46/193 (23%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL-----------EKP--LVYKYMSNGTLY 352
A+K L + E++ + L H N+ L+ +++ +G+L
Sbjct: 54 AVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLK 113
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412
L N N ++ +L+ + +G+ +L +H+++++ +LV+ + +I D
Sbjct: 114 EYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGD 169
Query: 413 FGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQKP 445
FG ++ D + DV FGV L EL+T
Sbjct: 170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD 229
Query: 446 FEINASEEGYKGN 458
A G
Sbjct: 230 SSPMALFLKMIGP 242
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 7e-08
Identities = 39/190 (20%), Positives = 62/190 (32%), Gaps = 58/190 (30%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSL 354
A+K L + E FL+E + H N+ P + + M+ G L S
Sbjct: 105 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 164
Query: 355 L-----HSNGNTALDWPSRLRIGLGAARGLSWL--HHCCHPP-----CLHQNISSSVILV 402
L + ++L L + A G +L +H H CL +
Sbjct: 165 LRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL-------LTCP 217
Query: 403 DEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVVLL 437
A+I DFG +R G + + D FGV+L
Sbjct: 218 GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 277
Query: 438 ELVT-GQKPF 446
E+ + G P+
Sbjct: 278 EIFSLGYMPY 287
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 61/209 (29%)
Query: 294 GTTYKAMLLDGS----MLAIKRL--SACKLGEKQ-FLLEMKQVGLLKHPNL--------- 337
G+ +A L +A+K L + + FL E + HP++
Sbjct: 37 GSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96
Query: 338 EKP--------LVYKYMSNGTLYSLL----HSNGNTALDWPSRLRIGLGAARGLSWL--H 383
+ ++ +M +G L++ L L + +R + A G+ +L
Sbjct: 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR 156
Query: 384 HCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR-------------------------L 418
+ H +++++ ++ ED + DFG SR L
Sbjct: 157 NFIH-----RDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL 211
Query: 419 TNGDASLQKDVHGFGVVLLELVT-GQKPF 446
+ ++ DV FGV + E++T GQ P+
Sbjct: 212 ADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 60/208 (28%)
Query: 294 GTTYKAMLLDGS----MLAIKRL---SACKLGEKQFLLEMKQVGLLKHPNL--------- 337
G+ + L +A+K + ++ + ++FL E + HPN+
Sbjct: 48 GSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
Query: 338 EKP-------LVYKYMSNGTLYSLL----HSNGNTALDWPSRLRIGLGAARGLSWL--HH 384
++ +M G L++ L G + + L+ + A G+ +L +
Sbjct: 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN 167
Query: 385 CCHPPCLHQNISSSVILVDEDFDARIMDFGFSR-------------------------LT 419
LH+++++ ++ +D + DFG S+ L
Sbjct: 168 F-----LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA 222
Query: 420 NGDASLQKDVHGFGVVLLELVT-GQKPF 446
+ + + DV FGV + E+ T G P+
Sbjct: 223 DRVYTSKSDVWAFGVTMWEIATRGMTPY 250
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 45/195 (23%)
Query: 304 GSMLAIKRLSACKLGEKQ-FLLEMKQVGLLKHPNL-----------EKP--LVYKYMSNG 349
G ++A+K+L + F E++ + L+H N+ + L+ +Y+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDAR 409
+L L + +D L+ +G+ +L +H+++++ ILV+ + +
Sbjct: 99 SLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVK 154
Query: 410 IMDFGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-G 442
I DFG +++ D S+ DV FGVVL EL T
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 443 QKPFEINASEEGYKG 457
+K A G
Sbjct: 215 EKSKSPPAEFMRMIG 229
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 1e-07
Identities = 48/270 (17%), Positives = 93/270 (34%), Gaps = 45/270 (16%)
Query: 294 GTTYKAMLL-DGSMLAIK--RLSACKLGEKQFLLEMKQVGLLKHPN--------LEKPLV 342
G +K G ++A K L Q + E++ + P +
Sbjct: 47 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 106
Query: 343 Y---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
++M G+L +L G + + + +GL++L +H+++ S
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGK--VSIAVIKGLTYLREKHK--IMHRDVKPSN 162
Query: 400 ILVDEDFDARIMDFGFS---------------------RLTNGDASLQKDVHGFGVVLLE 438
ILV+ + ++ DFG S RL S+Q D+ G+ L+E
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
Query: 439 LVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE----ILQFLQ 494
+ G+ P ++E + + + L G D I + L
Sbjct: 223 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLD 282
Query: 495 -IACKCVAVRPKEKWSM-YQVYISLCSIAE 522
I + P +S+ +Q +++ C I
Sbjct: 283 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 312
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 58/198 (29%)
Query: 294 GTTYKA--MLLDGSMLAIKRLSACKLGEKQ--FLLEMKQVGLLKHPNL------------ 337
G Y A ++G + +K L E Q + E + + + HP++
Sbjct: 94 GWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR 153
Query: 338 -EKPLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-----HC-CH 387
P+ Y +Y+ +L L + L LS+LH +
Sbjct: 154 HGDPVGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLK 209
Query: 388 PPCLHQNISSSVILVDEDFDARIMDFGFSR-LTN-----------------GDASLQKDV 429
P +NI ++ E+ +++D G + + ++ D+
Sbjct: 210 P----ENI-----MLTEE-QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDI 259
Query: 430 HGFGVVLLELVTGQKPFE 447
+ G L L
Sbjct: 260 YTVGRTLAALTLDLPTRN 277
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 44/199 (22%), Positives = 69/199 (34%), Gaps = 28/199 (14%)
Query: 43 CRFNGVSCWN--------GLENRILSLELEEMNLSGQVPE-SLQSCKSLQVLNLSTNNLF 93
C N +SC L + L+L NLS E + +L L LS N+L
Sbjct: 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHL- 76
Query: 94 GKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPP-QLSS 151
I ++ P L LDLS+N L T+ + L L L N + +
Sbjct: 77 NFISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFED 134
Query: 152 LVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAG 211
+ +L++ ++ N +S K+ L L L +
Sbjct: 135 MAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK-------------LPLT 181
Query: 212 AFGAAPSLMLVFGLWLWNN 230
P+ + GL+L NN
Sbjct: 182 DLQKLPAWVKN-GLYLHNN 199
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 2e-07
Identities = 22/168 (13%), Positives = 51/168 (30%), Gaps = 37/168 (22%)
Query: 345 YMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
+ T +L S+ + +L +RL++ L R L+ LHH +H + I++
Sbjct: 188 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVL 244
Query: 403 DEDFDARIMDFGFSRLTN-----------------------------GDASLQKDVHGFG 433
D+ + F + D G
Sbjct: 245 DQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481
+ + + P +A+ G + + + ++ +++ L
Sbjct: 305 LAIYWIWCADLPNTDDAALGGSEWIFRSCKN---IPQPVRALLEGFLR 349
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 55/191 (28%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
A+K L A + + E MK +G KH N+ + PL + +Y S G L
Sbjct: 105 AVKMLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCH-----------PPCLHQNISSSVI 400
L + L++ L C + C+H+++++ +
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 222
Query: 401 LVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVV 435
LV ED +I DFG +R L + + Q DV FGV+
Sbjct: 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 282
Query: 436 LLELVT-GQKP 445
L E+ T G P
Sbjct: 283 LWEIFTLGGSP 293
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 33/205 (16%), Positives = 63/205 (30%), Gaps = 58/205 (28%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLG---EKQFLL-EMKQVGLLKHPN--------LEKP 340
Y+A LLDG +A+K++ L + + E+ + L HPN +E
Sbjct: 46 SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN 105
Query: 341 LVYKYM---SNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHPP 389
+ + G L ++ T + +L L H
Sbjct: 106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL----------EHMHSR 155
Query: 390 C-LHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHG----------------- 431
+H++I + + + ++ D G R + + + G
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 215
Query: 432 ------FGVVLLELVTGQKPFEINA 450
G +L E+ Q PF +
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYGDK 240
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 22/119 (18%)
Query: 51 WNGLENRILSLE----LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW 103
+E +L + + LS + SL ++L++L+L N + K L
Sbjct: 34 IPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLI--KKIENLDAV 91
Query: 104 FPYLVSLDLSNN---DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS 159
L L +S N LSG + V L LY+S N+++ + +L
Sbjct: 92 ADTLEELWISYNQIASLSG-----IEKLVNLRVLYMSNNKIT-----NWGEIDKLAALD 140
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 25/174 (14%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+ L +S S ++C++L +L L +N L +I L LDLS+N
Sbjct: 36 RIFLHGNRISHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 120 TIPHE-LGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPS-FFNGA 176
++ L+TL+L L L P L L+ + N L +P F
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDL 152
Query: 177 MKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN 230
+ L L ++++ + AF SL L L N
Sbjct: 153 GNLTHL---------------FLHGNRISS-VPERAFRGLHSLDR---LLLHQN 187
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 3/108 (2%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+L L+ L P + +LQ L L N L +P + L L L N +S
Sbjct: 109 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL-QALPDDTFRDLGNLTHLFLHGNRISS 167
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLS 166
L+ L L NR++ + P L RL + N LS
Sbjct: 168 VPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRDLGRLMTLYLFANNLS 214
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 26/150 (17%)
Query: 89 TNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ 148
+P + + L N +S C L L+L N L+ +
Sbjct: 19 PQQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAA 74
Query: 149 -LSSLVRLKQFSVAYNCLSGRIPS-FFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAA 206
+ L L+Q ++ N + F+G ++ L L + L
Sbjct: 75 AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL---------------HLDRCGLQE 119
Query: 207 IIAAGAFGAAPSLMLVFGLWL-WNNLTRVS 235
+ G F +L L+L N L +
Sbjct: 120 -LGPGLFRGLAAL---QYLYLQDNALQALP 145
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 4e-07
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 4/96 (4%)
Query: 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYL 131
L ++L L + + + + L +L + + L P L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 132 NTLYLSYNRLSGPLPPQL---SSLVRLKQFSVAYNC 164
+ L LS+N L L + SL L +C
Sbjct: 83 SRLNLSFNALES-LSWKTVQGLSLQELVLSGNPLHC 117
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 4e-04
Identities = 15/100 (15%), Positives = 27/100 (27%), Gaps = 5/100 (5%)
Query: 78 SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTLYL 136
L + + L L L + N + L L L +
Sbjct: 6 CPHGSSGLRCTRDGAL-DSLHHL-PGAENLTELYIENQQHLQHLELRDLRGLGELRNLTI 63
Query: 137 SYNRLSGPLPPQ-LSSLVRLKQFSVAYNCLSGRIPSFFNG 175
+ L + P RL + ++++N L G
Sbjct: 64 VKSGLR-FVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 4e-07
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 62 ELEEMNLSGQ---VPESLQSCKSLQVLNLSTNNLFGKIPTQLC--KWFPYLVSLDLSNND 116
E + NL + + S+ + + +++ + ++ P + L L+ N
Sbjct: 22 ETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDI-----KSVQGIQYLPNVTKLFLNGNK 76
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L+ P L N L L+L N++ L L L +LK S+ +N +S
Sbjct: 77 LTDIKP--LTNLKNLGWLFLDENKIKD-LSS-LKDLKKLKSLSLEHNGIS 122
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 4e-07
Identities = 24/112 (21%), Positives = 33/112 (29%), Gaps = 15/112 (13%)
Query: 56 NRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFP 105
N I + LE + L L L L+L N + I
Sbjct: 119 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQI-SDIVP--LAGLT 175
Query: 106 YLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQ 157
L +L LS N +S + L L+ L L S+LV
Sbjct: 176 KLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNT 225
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 1e-06
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Query: 63 LEEMNLSG-QVP--ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
++++ + + + +Q ++ L L+ N L I L L L L N +
Sbjct: 45 IDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKL-TDI-KPLTN-LKNLGWLFLDENKIKD 101
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L + L +L L +N +S + L L +L+ + N ++
Sbjct: 102 LSS--LKDLKKLKSLSLEHNGISD-ING-LVHLPQLESLYLGNNKIT 144
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133
+ NL ++ TQ + + +N+D+ ++ + +
Sbjct: 15 FPDDAFAETIKDNLKKKSV-TDAVTQNE--LNSIDQIIANNSDIK-SVQ-GIQYLPNVTK 69
Query: 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L+L+ N+L+ + P L++L L + N +
Sbjct: 70 LFLNGNKLTD-IKP-LTNLKNLGWLFLDENKIK 100
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 4e-07
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 80 KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139
KSLQ L++S N++ C W L+SL++S+N L+ TI L + L L N
Sbjct: 374 KSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSN 431
Query: 140 RLSGPLPPQLSSLVRLKQFSVAYN 163
++ +P Q+ L L++ +VA N
Sbjct: 432 KIKS-IPKQVVKLEALQELNVASN 454
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 8e-07
Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 21/211 (9%)
Query: 22 FNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKS 81
N L+ ++ + FI V I +++L+ S S K+
Sbjct: 218 TNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKA 277
Query: 82 LQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRL 141
L + + +++FG + + + F + + + + L S N L
Sbjct: 278 LSIHQV-VSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLL 336
Query: 142 SGPLPPQLSSLVRLKQFSVAYNCLS--GRIPSFFNGAMKMDMLADSRLGGANLGSKCCDL 199
+ + L L+ + N L +I + L D+
Sbjct: 337 TDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL---------------DI 381
Query: 200 SKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN 230
S+ ++ G SL+ L + +N
Sbjct: 382 SQNSVSYDEKKGDCSWTKSLLS---LNMSSN 409
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS 118
++ + L VP+ L +LN+S N + ++ T L L +S+N +
Sbjct: 3 FLVDRSKNGLI-HVPKDLSQ--KTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQ 58
Query: 119 GTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L L LS+N+L + V LK +++N
Sbjct: 59 YLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFD 103
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 73 PESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN 132
+ S L++L +S N + + + K+ L LDLS+N L H N L
Sbjct: 38 TSDILSLSKLRILIISHNRI-QYLDISVFKFNQELEYLDLSHNKLVKISCHPTVN---LK 93
Query: 133 TLYLSYNRL-SGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
L LS+N + P+ + ++ +LK ++ L
Sbjct: 94 HLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPI 135
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 73 PESLQSCKSLQVLNLSTNNL----FGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNC 128
KSL LN+S+N L F +P + + LDL +N + +IP ++
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCLPPR-------IKVLDLHSNKIK-SIPKQVVKL 443
Query: 129 VYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163
L L ++ N+L L L++ + N
Sbjct: 444 EALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 56/193 (29%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL----------EKPL--VYKYMSNGT 350
A+K L A + + E + +G H N+ PL + ++ G
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCH-----------PPCLHQNISSSV 399
L + L S N + + L L C+H+++++
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 400 ILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGV 434
IL+ E +I DFG +R + + ++Q DV FGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 435 VLLELVT-GQKPF 446
+L E+ + G P+
Sbjct: 239 LLWEIFSLGASPY 251
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
++ L+ ++ + L L+ S N + +Q L L+ N
Sbjct: 148 TQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITELDVSQN----KLLNRLNCDTN 201
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
+++ + L + L L S N+L+ + ++ L +L F + N L+
Sbjct: 202 NIT-KLD--LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLT 246
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 9e-07
Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL--CKWFPYLVSLDLSNNDL 117
S + S + +L L+ +++ T + + L L ++N++
Sbjct: 22 SEVAAAFEMQATDTISEEQLATLTSLDCHNSSI-----TDMTGIEKLTGLTKLICTSNNI 76
Query: 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
+ T+ L L L N+L+ L ++ L +L + N L+
Sbjct: 77 T-TLD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLT 119
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 43 CRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102
C + + N L + + + L +L+ + ++
Sbjct: 261 CIQTDLLEIDLTHNTQL-IYFQAEGCRKIKELDVTHNTQLYLLDCQAAGI-TELDLSQN- 317
Query: 103 WFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAY 162
P LV L L+N +L+ + + + L +L + + + L A
Sbjct: 318 --PKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQD-FSS-VGKIPALNNNFEAE 370
Query: 163 N 163
Sbjct: 371 G 371
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 11/93 (11%)
Query: 75 SLQSCKSLQVLNLSTNNLFGKIPTQL-CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133
+ L LN + N L T++ L LD N + + L T
Sbjct: 122 DVSQNPLLTYLNCARNTL-----TEIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTT 174
Query: 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L S+N+++ L +S L + + N ++
Sbjct: 175 LDCSFNKITE-LD--VSQNKLLNRLNCDTNNIT 204
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 9/96 (9%)
Query: 62 ELEEMNLSG-QVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+L ++ + E L L L L+ L ++ L SL N +
Sbjct: 298 QLYLLDCQAAGITELDLSQNPKLVYLYLNNTEL-TELDVSHN---TKLKSLSCVNAHIQ- 352
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRL 155
+G LN + + + +P + + L
Sbjct: 353 DFS-SVGKIPALNNNFEAEGQTIT-MPKETLTNNSL 386
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 28/135 (20%)
Query: 56 NRILSLE------LEEMNLSG-QVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYL 107
N I L+ L ++ S ++ E + L + S N L ++ L
Sbjct: 201 NNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPL-TELDVSTLSKLTTL 259
Query: 108 -------VSLDLSNN---------DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSS 151
+ +DL++N ++ + L L ++ L LS
Sbjct: 260 HCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-ELD--LSQ 316
Query: 152 LVRLKQFSVAYNCLS 166
+L + L+
Sbjct: 317 NPKLVYLYLNNTELT 331
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 48/192 (25%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL-----------EKP--LVYKYMSNGTLY 352
A+K L A + E+ + L H ++ LV +Y+ G+L
Sbjct: 64 AVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123
Query: 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412
L + ++ L G+++LH +H+++++ +L+D D +I D
Sbjct: 124 DYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGD 177
Query: 413 FGFSRLTNGDA--------------------------SLQKDVHGFGVVLLELVT-GQKP 445
FG ++ DV FGV L EL+T
Sbjct: 178 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 237
Query: 446 FEINASEEGYKG 457
G
Sbjct: 238 QSPPTKFLELIG 249
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 7e-07
Identities = 44/203 (21%), Positives = 69/203 (33%), Gaps = 77/203 (37%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
A+K L A + + E MK +G KH N+ + PL + +Y S G L
Sbjct: 117 AVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 352 YSLLHSNGNTALDWPSR--------------LRIGLGAARGLSWL--HHCCH------PP 389
L + +++ + ARG+ +L C H
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR-- 232
Query: 390 CLHQNISSSVILVDEDFDARIMDFGFSR-------------------------LTNGDAS 424
N+ LV E+ +I DFG +R L + +
Sbjct: 233 ----NV-----LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 283
Query: 425 LQKDVHGFGVVLLELVT-GQKPF 446
Q DV FGV++ E+ T G P+
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPY 306
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 17/134 (12%)
Query: 46 NGVSCWNGLENRILSLELEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQLC- 101
++ L LS L+ + L L +LQ L++ + + L
Sbjct: 117 TQITDVTPLAG--LS-NLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQV-----SDLTP 168
Query: 102 -KWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
L +L +N +S I L + L ++L N++S + P L++ L ++
Sbjct: 169 LANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISD-VSP-LANTSNLFIVTL 224
Query: 161 AYNCLSGRIPSFFN 174
++ + + N
Sbjct: 225 TNQTITNQPVFYNN 238
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133
E +Q +L L L N + + K + L+LS N L + + + T
Sbjct: 57 EGVQYLNNLIGLELKDNQI-TDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKT 111
Query: 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L L+ +++ L+ L L+ + N ++
Sbjct: 112 LDLTSTQITD--VTPLAGLSNLQVLYLDLNQIT 142
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 50/201 (24%)
Query: 293 TGTTYKAM-LLDGSMLAIKR--LSACKLGEKQFLL-EMKQVGLLKHPNLEKP-------- 340
T A G + ++R L AC FL E+ L HPN+
Sbjct: 40 LMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN 99
Query: 341 ---LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
+V +M+ G+ L+ ++ ++ + I G + L ++HH + +H+++ +
Sbjct: 100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY---VHRSVKA 156
Query: 398 SVILVDEDFDARIMDFGFS---------RLTNGDAS--------------LQKDVHG--- 431
S IL+ D + + + D LQ+++ G
Sbjct: 157 SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA 216
Query: 432 ------FGVVLLELVTGQKPF 446
G+ EL G PF
Sbjct: 217 KSDIYSVGITACELANGHVPF 237
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 62 ELEEMNLSG------QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
+++E+ L ++ + L+ L+ L I L L+LS+N
Sbjct: 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL-TSI--ANLPKLNKLKKLELSDN 74
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQF 158
+SG + C L L LS N++ LS++ LK+
Sbjct: 75 RVSGGLEVLAEKCPNLTHLNLSGNKIK-----DLSTIEPLKKL 112
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 77 QSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136
++ ++ L L + L F L L N L+ +I + L L L L
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLEL 71
Query: 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
S NR+SG L L +++ N +
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 33/203 (16%), Positives = 62/203 (30%), Gaps = 17/203 (8%)
Query: 28 KLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNL 87
++ + + + F I +L + E + S + KSL + ++
Sbjct: 253 NVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHV 312
Query: 88 STNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPP 147
N +F L F + LS +D + L + N + +
Sbjct: 313 -KNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQ 371
Query: 148 QLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAI 207
S+L RL+ + N L M L + D+S L +
Sbjct: 372 GCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSL------------ETLDVSLNSLNSH 418
Query: 208 IAAGAFGAAPSLMLVFGLWLWNN 230
A S+++ L L +N
Sbjct: 419 AYDRTCAWAESILV---LNLSSN 438
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYL 131
V ++ SL+ L++S N+L + C W ++ L+LS+N L+G++ L +
Sbjct: 395 VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452
Query: 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165
L L NR+ +P ++ L L++ +VA N L
Sbjct: 453 KVLDLHNNRIMS-IPKDVTHLQALQELNVASNQL 485
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 15/112 (13%)
Query: 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
N I L + L+VL LS N + + + + L LD+S+N
Sbjct: 62 NSISELR----------MPDISFLSELRVLRLSHNRI-RSLDFHVFLFNQDLEYLDVSHN 110
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRL-SGPLPPQLSSLVRLKQFSVAYNCLS 166
L + + L L LS+N P+ + +L +L ++
Sbjct: 111 RLQNISCCPMAS---LRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 44/202 (21%), Positives = 68/202 (33%), Gaps = 77/202 (38%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
A+K L A + + E MK +G KH N+ + PL + +Y S G L
Sbjct: 71 AVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 352 YSLLHSNGNTALDWPSR--------------LRIGLGAARGLSWL--HHCCH------PP 389
L + +++ + ARG+ +L C H
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR-- 186
Query: 390 CLHQNISSSVILVDEDFDARIMDFGFSR-------------------------LTNGDAS 424
N+ LV E+ +I DFG +R L + +
Sbjct: 187 ----NV-----LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 425 LQKDVHGFGVVLLELVT-GQKP 445
Q DV FGV++ E+ T G P
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSP 259
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLC--KWFPYLVSLDLSNN 115
+ L++ +++ + S+ + + +++ + ++ P + L L+ N
Sbjct: 26 TIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDI-----KSVQGIQYLPNVTKLFLNGN 78
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L+ P L N L L+L N++ L L L +LK S+ +N +S
Sbjct: 79 KLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGIS 125
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLC--KWFPYLVSLDLSNNDLSGTIPHELGNCVYL 131
SL+ K L+ L+L N + + + P L SL L NN ++ L L
Sbjct: 106 SSLKDLKKLKSLSLEHNGI-----SDINGLVHLPQLESLYLGNNKITDITV--LSRLTKL 158
Query: 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
+TL L N++S + P L+ L +L+ ++ N +S
Sbjct: 159 DTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHIS 191
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133
+ +Q ++ L L+ N L I L L L L N + L + L +
Sbjct: 62 QGIQYLPNVTKLFLNGNKL-TDI-KPLAN-LKNLGWLFLDENKVKDLSS--LKDLKKLKS 116
Query: 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L L +N +S + L L +L+ + N ++
Sbjct: 117 LSLEHNGISD-ING-LVHLPQLESLYLGNNKIT 147
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 23/114 (20%), Positives = 34/114 (29%), Gaps = 19/114 (16%)
Query: 56 NRILSLE-------LEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQL--CKW 103
N I + LE + L L L L+L N + + +
Sbjct: 122 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQI-----SDIVPLAG 176
Query: 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQ 157
L +L LS N +S + L L+ L L S+LV
Sbjct: 177 LTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNT 228
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133
S + NL ++ TQ + + +N+D+ ++ + +
Sbjct: 18 FSDDAFAETIKDNLKKKSV-TDAVTQNE--LNSIDQIIANNSDIK-SVQ-GIQYLPNVTK 72
Query: 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L+L+ N+L+ + P L++L L + N +
Sbjct: 73 LFLNGNKLTD-IKP-LANLKNLGWLFLDENKVK 103
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 67/198 (33%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
A+K L SA + + E + +G H N+ P + +Y G L
Sbjct: 57 AVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCYGDL 114
Query: 352 YSLLHSNGNTALDWPSR----------------LRIGLGAARGLSWL--HHCCHPPCLHQ 393
+ L ++ + + L A+G+++L +C +H+
Sbjct: 115 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-----IHR 169
Query: 394 NISSSVILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKD 428
++++ IL+ +I DFG +R + N + + D
Sbjct: 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 229
Query: 429 VHGFGVVLLELVT-GQKP 445
V +G+ L EL + G P
Sbjct: 230 VWSYGIFLWELFSLGSSP 247
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 62 ELEEMNLSG------QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115
+ E+ L ++ +L+ L+L N + + L K P L L+LS N
Sbjct: 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLI-NVGLISV-SNLPK-LPKLKKLELSEN 81
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQF 158
+ G + L L LS N+L +S+L LK+
Sbjct: 82 RIFGGLDMLAEKLPNLTHLNLSGNKLK-----DISTLEPLKKL 119
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 77 QSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136
++ +++ L L L F L L L N L ++ + L L L L
Sbjct: 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLEL 78
Query: 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
S NR+ G L L L +++ N L
Sbjct: 79 SENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133
+ NL ++ + +Q K + + + N+++ ++ + L
Sbjct: 13 FPDPGLANAVKQNLGKQSV-TDLVSQ--KELSGVQNFNGDNSNIQ-SLAG-MQFFTNLKE 67
Query: 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
L+LS+N++S L P L L +L++ SV N L
Sbjct: 68 LHLSHNQISD-LSP-LKDLTKLEELSVNRNRLK 98
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 9e-06
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 15/110 (13%)
Query: 62 ELEEMNLSGQ---VPESLQSCKSLQVLNLSTNNLFGKIPTQLC--KWFPYLVSLDLSNND 116
+ NL Q S + +Q N +N+ L ++F L L LS+N
Sbjct: 20 NAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNI-----QSLAGMQFFTNLKELHLSHNQ 74
Query: 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166
+S P L + L L ++ NRL + L RL + N L
Sbjct: 75 ISDLSP--LKDLTKLEELSVNRNRLKNLNGIPSACLSRL---FLDNNELR 119
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 12/117 (10%)
Query: 43 CRFNGVSCWNGLENRILSLELEEMNLSG---QVPESLQSCKSLQVLNLSTNNLFGKIPTQ 99
N + NG+ + L + L + +SL K+L++L++ N L I
Sbjct: 92 VNRNRLKNLNGIPS----ACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKL-KSIVM- 145
Query: 100 LCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLK 156
+ L LDL N+++ T L +N + L+ + L
Sbjct: 146 -LGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWIDLTGQKCVNEPVKYQPELYITN 199
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 56/203 (27%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPN---------------- 336
G +KA +DG IKR+ K ++ E+K + L H N
Sbjct: 25 GQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81
Query: 337 --------LEKPLVY---KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC 385
+ ++ ++ GTL + LD L + +G+ ++H
Sbjct: 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK 141
Query: 386 CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDV---------------H 430
+++++ S I + + +I DFG D + +
Sbjct: 142 KL---INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDY 198
Query: 431 GF-------GVVLLELVTGQKPF 446
G G++L EL+
Sbjct: 199 GKEVDLYALGLILAELLHVCDTA 221
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 41/200 (20%), Positives = 67/200 (33%), Gaps = 31/200 (15%)
Query: 43 CRFNGVSCWN--------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG 94
C L +L+L L S S LQVL+LS +
Sbjct: 7 VPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI-Q 65
Query: 95 KIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL-GNCVYLNTLYLSYNRLSGPLPPQL-SSL 152
I + +L +L L+ N + ++ L L L+ L L
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHL 123
Query: 153 VRLKQFSVAYNCL-SGRIPSFFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAG 211
LK+ +VA+N + S ++P +F+ ++ L DLS K+ + I
Sbjct: 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHL---------------DLSSNKIQS-IYCT 167
Query: 212 AFGAAPSL-MLVFGLWLWNN 230
+ +L L L N
Sbjct: 168 DLRVLHQMPLLNLSLDLSLN 187
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIP----TQLCKWFPYLVSL 110
N I S +L PE + +L+ L+LS+N + I L + +SL
Sbjct: 133 HNLIQSFKL---------PEYFSNLTNLEHLDLSSNKI-QSIYCTDLRVLHQMPLLNLSL 182
Query: 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ----LSSLVRL 155
DLS N ++ I + L L L N+L +P L+SL ++
Sbjct: 183 DLSLNPMN-FIQPGAFKEIRLKELALDTNQLKS-VPDGIFDRLTSLQKI 229
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 61/246 (24%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLL-EMKQVGLLKHPNL---------EKPLV 342
L DG A+KR+ + +++ E L HPN+ E+
Sbjct: 43 SYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102
Query: 343 YK------YMSNGTLYSLL--HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
++ + GTL++ + + L L + LG RGL +H H++
Sbjct: 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRD 159
Query: 395 ISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDV---------HG-------------- 431
+ + IL+ ++ +MD G +
Sbjct: 160 LKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219
Query: 432 ------------FGVVLLELVTGQKPFEINASEEGYKGNLVN----WIDQLSSSGRIKDV 475
G VL ++ G+ P+++ + V S + +
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQL 279
Query: 476 IDKALT 481
++ +T
Sbjct: 280 LNSMMT 285
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 43/231 (18%), Positives = 73/231 (31%), Gaps = 54/231 (23%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL----KHPN--------LEKP 340
G +K DG + A+KR + G K ++ +VG +HP E
Sbjct: 71 GEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130
Query: 341 LVYKYM--SNGTLYSLLHSNG-----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQ 393
++Y +L + G + L+ LH +H
Sbjct: 131 ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDT------LLALAHLHSQ---GLVHL 181
Query: 394 NISSSVILVDEDFDARIMDFGFSR-LTNGDAS--------------LQK------DVHGF 432
++ + I + ++ DFG L A LQ DV
Sbjct: 182 DVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSL 241
Query: 433 GVVLLELVTGQK-PFEINASEEGYKGNL-VNWIDQLSSSGRIKDVIDKALT 481
G+ +LE+ + P ++ +G L + LSS R V+ L
Sbjct: 242 GLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELR--SVLVMMLE 290
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 8e-06
Identities = 42/208 (20%), Positives = 66/208 (31%), Gaps = 80/208 (38%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSL 354
A+K L A + F E + +PN+ KP+ +++YM+ G L
Sbjct: 81 AVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEF 140
Query: 355 LHSNGNTALDWPSR----------------------LRIGLGAARGLSWL--HHCCHPPC 390
L S + S L I A G+++L H
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH--- 197
Query: 391 LHQ------NISSSVILVDEDFDARIMDFGFSR-------------------------LT 419
N LV E+ +I DFG SR +
Sbjct: 198 ---RDLATRN-----CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF 249
Query: 420 NGDASLQKDVHGFGVVLLELVT-GQKPF 446
+ + DV +GVVL E+ + G +P+
Sbjct: 250 YNRYTTESDVWAYGVVLWEIFSYGLQPY 277
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 31/156 (19%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP----HELGNCVYLNTLYL 136
L L+ N T + K P L ++ SNN ++ I +N + L
Sbjct: 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASG---VNEILL 88
Query: 137 SYNRLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPSF-FNGAMKMDMLADSRLGGANLGS 194
+ NRL + ++ L LK + N ++ + + F G + +L L + +
Sbjct: 89 TSNRLEN-VQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLL---SLYDNQITT 143
Query: 195 KCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN 230
+A GAF SL L L N
Sbjct: 144 -------------VAPGAFDTLHSLST---LNLLAN 163
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 39/202 (19%), Positives = 62/202 (30%), Gaps = 61/202 (30%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGE-KQFLLEMKQVGLLKHPN--------------- 336
G Y L +AIK + + E+ LKH N
Sbjct: 36 GIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK 95
Query: 337 --LEKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRI----GLGAARGLSWLHHCCHPPC 390
+E + G+L +LL S D + L GL +LH
Sbjct: 96 IFME------QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL---EGLKYLHDNQ---I 143
Query: 391 LHQNISSSVILVD-EDFDARIMDFGFSRLTNGDASLQKDVHG------------------ 431
+H++I +L++ +I DFG S+ G + G
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 432 -------FGVVLLELVTGQKPF 446
G ++E+ TG+ PF
Sbjct: 204 KAADIWSLGCTIIEMATGKPPF 225
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 72/203 (35%)
Query: 308 AIKRL--SACKLGEKQFLLE---MKQVGLLKHPNL---------EKPL--VYKYMSNGTL 351
A+K L A + + E M Q+G H N+ P+ +++Y G L
Sbjct: 79 AVKMLKEKADSSEREALMSELKMMTQLG--SHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 352 YSLLHSNGNTALDWPSR---------------------LRIGLGAARGLSWL--HHCCHP 388
+ L S + L A+G+ +L C
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC--- 193
Query: 389 PCLHQNISSSVILVDEDFDARIMDFGFSR-------------------------LTNGDA 423
+H+++++ +LV +I DFG +R L G
Sbjct: 194 --VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY 251
Query: 424 SLQKDVHGFGVVLLELVT-GQKP 445
+++ DV +G++L E+ + G P
Sbjct: 252 TIKSDVWSYGILLWEIFSLGVNP 274
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 34/194 (17%), Positives = 60/194 (30%), Gaps = 50/194 (25%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPN--------LEKPLVY- 343
G ++ G A+K++ + E+ L P E P V
Sbjct: 72 GEVHRMKDKQTGFQCAVKKVRLEVFRVE----ELVACAGLSSPRIVPLYGAVREGPWVNI 127
Query: 344 --KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401
+ + G+L L+ G L L A GL +LH LH ++ + +L
Sbjct: 128 FMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVL 182
Query: 402 VDED-FDARIMDFGFSRLTNGDASLQ-----KDVHG-----------------------F 432
+ D A + DFG + D + + G
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242
Query: 433 GVVLLELVTGQKPF 446
++L ++ G P+
Sbjct: 243 CCMMLHMLNGCHPW 256
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 39/182 (21%), Positives = 60/182 (32%), Gaps = 26/182 (14%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
GL + SL+L ++ LQ C +LQ L L++N + I L LDL
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI-NTIEEDSFSSLGSLEHLDL 107
Query: 113 SNNDLSGTIPHEL-GNCVYLNTLYLSYNRLSGPLPPQ--LSSLVRLKQFSVAYNCLSGRI 169
S N LS + L L L N L S L +L+ V +I
Sbjct: 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKI 165
Query: 170 PS-FFNGAMKMDMLADSRLGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLW 228
F G + L + + ++L S + + ++ L L
Sbjct: 166 QRKDFAG---LTFLEELEIDASDLQS-------------YEPKSLKSIQNVSH---LILH 206
Query: 229 NN 230
Sbjct: 207 MK 208
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 22/171 (12%)
Query: 68 LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGN 127
++ SC + S+ +L IP+ L + SLDLSNN ++ +L
Sbjct: 19 KEESSNQASLSCDRNGICKGSSGSL-NSIPSGL---TEAVKSLDLSNNRITYISNSDLQR 74
Query: 128 CVYLNTLYLSYNRLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSR 186
CV L L L+ N ++ + SSL L+ ++YN LS S+F + L
Sbjct: 75 CVNLQALVLTSNGINT-IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFL---- 129
Query: 187 LGGANLGSKCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNNLTRVSKR 237
+L + F L ++ + T++ ++
Sbjct: 130 -----------NLLGNPYKTLGETSLFSHLTKLQILRVGNMD-TFTKIQRK 168
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 63 LEEMNLSG----QVPES--LQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116
L +NL G + E+ LQ+L + + F KI + +L L++ +D
Sbjct: 126 LTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185
Query: 117 LSGTIPHE-LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167
L + + L + ++ L L + L + ++ + L
Sbjct: 186 LQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT 236
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
GL + L L + + ++ S + L LNLS NN ++P + V LD+
Sbjct: 151 GLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNC 164
S + + L N L + LP L LV L + S+ Y
Sbjct: 210 SRTRIHSLPSYGLENLKKLRARSTYNLKK---LPT-LEKLVALMEASLTYPS 257
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 41/189 (21%)
Query: 304 GSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNLEKP-----------LVYKYMSN 348
+LA+K L +L E Q E++ L+HPN+ + L+ +Y
Sbjct: 34 KFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93
Query: 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408
GT+Y L D A LS+ H +H++I +L+ +
Sbjct: 94 GTVYRELQKLSK--FDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 148
Query: 409 RIMDFGFSRLTNGDAS--------------LQKDVHGF-------GVVLLELVTGQKPFE 447
+I DFG+S ++ +H GV+ E + G+ PFE
Sbjct: 149 KIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
Query: 448 INASEEGYK 456
N +E YK
Sbjct: 209 ANTYQETYK 217
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 56/164 (34%)
Query: 331 LLKHPN-------LEKP----LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGA---- 375
+K+ + ++Y+YM N ++ ++ + I +
Sbjct: 99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158
Query: 376 --ARGLSWLH---HCCH----PPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDA--- 423
S++H + CH P NI L+D++ ++ DFG S
Sbjct: 159 SVLNSFSYIHNEKNICHRDVKP----SNI-----LMDKNGRVKLSDFGESEYMVDKKIKG 209
Query: 424 -------------SLQKDVHGF-------GVVLLELVTGQKPFE 447
S + +G G+ L + PF
Sbjct: 210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 23/169 (13%), Positives = 55/169 (32%), Gaps = 38/169 (22%)
Query: 345 YMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
+ T +L S+ + +L +RL++ L R L+ LHH +H + I++
Sbjct: 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVL 239
Query: 403 DEDFDARIMDFGFSRLTN-----------------------GDASLQKDVHGF------- 432
D+ + F ++ + F
Sbjct: 240 DQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299
Query: 433 GVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481
G+V+ + P +A+ G + + + + ++ +++ L
Sbjct: 300 GLVIYWIWCADLPITKDAALGGSEWIFRSCKN-IPQP--VRALLEGFLR 345
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 16/114 (14%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+L+L E +L + + ++ + +S + ++ + + +++ N
Sbjct: 35 TLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT 94
Query: 120 TIPHE-LGNCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPS 171
I + L L L + L P ++ S + N IP
Sbjct: 95 YIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPV 148
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 45/281 (16%), Positives = 80/281 (28%), Gaps = 85/281 (30%)
Query: 303 DGSMLAIKRLSACKLGEKQFLLE----MKQVGLLKHPNL------------------EKP 340
G A+KRL + + + + +++ MK+ L HPN+ +
Sbjct: 52 SGREYALKRLLSNEEEKNRAIIQEVCFMKK--LSGHPNIVQFCSAASIGKEESDTGQAEF 109
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSR-LRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
L+ + G L L + L+I R + +H PP +H+++
Sbjct: 110 LLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVEN 168
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQKDVHGF--------------------------- 432
+L+ ++ DFG + +
Sbjct: 169 LLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF 228
Query: 433 -----------GVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481
G +L L Q PFE A G + + +I L
Sbjct: 229 PIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK-YSIPPHDTQYTVFHSLIRAMLQ 287
Query: 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522
V P+E+ S+ +V L IA
Sbjct: 288 --------------------VNPEERLSIAEVVHQLQEIAA 308
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 44/203 (21%), Positives = 69/203 (33%), Gaps = 52/203 (25%)
Query: 293 TGTTYKAM-LLDGSMLAIKR--LSACKLGEKQFLLEMKQVGLLKHPNLEKP--------- 340
T A +AIKR L C+ + L E++ + HPN+
Sbjct: 28 TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 87
Query: 341 --LVYKYMSNGTLYSLLHSNGNTALDWPSRLR------IGLGAARGLSWLHHCCHPPCLH 392
LV K +S G++ ++ L I GL +LH +H
Sbjct: 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IH 144
Query: 393 QNISSSVILVDEDFDARIMDFGFS-RLTNGDASLQK------------------------ 427
+++ + IL+ ED +I DFG S L G +
Sbjct: 145 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY 204
Query: 428 ----DVHGFGVVLLELVTGQKPF 446
D+ FG+ +EL TG P+
Sbjct: 205 DFKADIWSFGITAIELATGAAPY 227
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 16/112 (14%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNL-----FGKIPTQLCKWFPYLVSLDLSNN 115
L L E L +L L LNL L G +P L +LDLS+N
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPV--------LGTLDLSHN 87
Query: 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQL-SSLVRLKQFSVAYNCLS 166
L ++P L L +S+NRL+ LP L L++ + N L
Sbjct: 88 QLQ-SLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELK 137
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 6e-05
Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 30/140 (21%)
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
K +S+ L + A+G+ +L C+H+++++ IL+
Sbjct: 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 227
Query: 404 EDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGVVLLE 438
E +I DFG +R + + ++Q DV FGV+L E
Sbjct: 228 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 287
Query: 439 LVT-GQKPF-EINASEEGYK 456
+ + G P+ + EE +
Sbjct: 288 IFSLGASPYPGVKIDEEFCR 307
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 9e-05
Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 44/192 (22%)
Query: 304 GSMLAIK-----RLSACKLGEKQFLLEMKQVGLLKHPN-------LEKP----LVYKYMS 347
G +AIK + + ++ E+K LKHP+ E LV +
Sbjct: 36 GLEVAIKMIDKKAMYKAGM-VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCH 94
Query: 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD 407
NG + L + + +R G+ +LH LH++++ S +L+ + +
Sbjct: 95 NGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMN 150
Query: 408 ARIMDFGFSRLTNGDAS----------------LQKDVHGF-------GVVLLELVTGQK 444
+I DFG + + HG G + L+ G+
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210
Query: 445 PFEINASEEGYK 456
PF+ + +
Sbjct: 211 PFDTDTVKNTLN 222
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 41/208 (19%), Positives = 65/208 (31%), Gaps = 80/208 (38%)
Query: 308 AIKRL--SACKLGEKQFLLEMKQVGLLKHPNL---------EKPL--VYKYMSNGTLYSL 354
A+K L +A + L E + + HP++ + PL + +Y G+L
Sbjct: 57 AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116
Query: 355 LHSNGNTALDWPSR----------------------LRIGLGAARGLSWL--HHCCHPPC 390
L + + + ++G+ +L H
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH--- 173
Query: 391 LHQ------NISSSVILVDEDFDARIMDFGFSR-------------------------LT 419
N ILV E +I DFG SR L
Sbjct: 174 ---RDLAARN-----ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF 225
Query: 420 NGDASLQKDVHGFGVVLLELVT-GQKPF 446
+ + Q DV FGV+L E+VT G P+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Query: 75 SLQSCKSLQVLNLSTNNLFGKIPTQL--CKWFPYLVSLDLSNNDLSGT----IPHELGNC 128
S +L+ L + + P L ++D+S L+ + +
Sbjct: 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKI 306
Query: 129 VYLNTLYLSYNRLSGPLPPQLSS 151
+L + + YN LS + +L
Sbjct: 307 KHLKFINMKYNYLSDEMKKELQK 329
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 25/124 (20%), Positives = 41/124 (33%), Gaps = 17/124 (13%)
Query: 60 SLELEEMNLSGQVPESLQSCK--SLQVLNL---STNNLFGKIPTQLCKW-----FPYLVS 109
SLE+ L V E + +L+ L L + F FP L
Sbjct: 197 SLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKW 256
Query: 110 LDLSNNDLSGTIPHELGNCVYLN---TLYLSYNRLSG----PLPPQLSSLVRLKQFSVAY 162
L + + + + L T+ +S L+ L + + LK ++ Y
Sbjct: 257 LGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKY 316
Query: 163 NCLS 166
N LS
Sbjct: 317 NYLS 320
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 16/227 (7%), Positives = 42/227 (18%), Gaps = 71/227 (31%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNLEKP-------- 340
+ ++ A+K + ++ L + E+
Sbjct: 76 SVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLL 135
Query: 341 -----------------------------LVYKYM--SNGTLYSLLH--SNGNTALDWPS 367
L+ L+S L +
Sbjct: 136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILA 195
Query: 368 RLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------- 420
+ R + L +H + + + + D + D
Sbjct: 196 LHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASS 252
Query: 421 ---------------GDASLQKDVHGFGVVLLELVTGQKPFEINASE 452
+ + G+ + + PF +
Sbjct: 253 VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 34/161 (21%), Positives = 56/161 (34%), Gaps = 30/161 (18%)
Query: 294 GTTYKAM-LLDGSMLAIK--RLSACKLGEKQFLLEMKQVGLLKHPN--------LEKPLV 342
G ++A +D AIK RL +L ++ + E+K + L+HP LEK
Sbjct: 19 GVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 343 YK---------------YMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWLHHCC 386
K L ++ + L I L A + +LH
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138
Query: 387 HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK 427
+H+++ S I D ++ DFG + D Q
Sbjct: 139 L---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 38/195 (19%), Positives = 68/195 (34%), Gaps = 53/195 (27%)
Query: 304 GSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNLEKP-----------LVYKYMSN 348
++A+K L +L E Q E++ L+HPN+ + L+ ++
Sbjct: 39 KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98
Query: 349 GTLYSLLHSNGNTALDWPSRLRIGLGA------ARGLSWLHHCCHPPCLHQNISSSVILV 402
G LY L +G R A A L + H +H++I +L+
Sbjct: 99 GELYKELQKHG--------RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLM 147
Query: 403 DEDFDARIMDFGFSRLTNGDAS--------------LQKDVHG-------FGVVLLELVT 441
+ +I DFG+S ++ H GV+ E +
Sbjct: 148 GYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 207
Query: 442 GQKPFEINASEEGYK 456
G PF+ + E ++
Sbjct: 208 GMPPFDSPSHTETHR 222
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 32/156 (20%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP----HELGNCVYLNTLYL 136
++ + L N + IP + L +DLSNN +S + L + LN+L L
Sbjct: 33 TITEIRLEQNTI-KVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRS---LNSLVL 87
Query: 137 SYNRLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPSF-FNGAMKMDMLADSRLGGANLGS 194
N+++ LP L L L+ + N ++ + F +++L
Sbjct: 88 YGNKITE-LPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLL------------ 133
Query: 195 KCCDLSKKKLAAIIAAGAFGAAPSLMLVFGLWLWNN 230
L KL IA G F ++ + L N
Sbjct: 134 ---SLYDNKLQT-IAKGTFSPLRAIQT---MHLAQN 162
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A Length = 267 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 3e-04
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 8/108 (7%)
Query: 62 ELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG-- 119
+ ++L G + +++ V L+ + + + P L+SL+LSNN L
Sbjct: 128 SQQALDLKGLRSDPDLVAQNIDV-VLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLD 186
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167
+ + L L LS N L L ++K + L G
Sbjct: 187 DMSSIVQKAPNLKILNLSGNELK-----SERELDKIKGLKLEELWLDG 229
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 27/199 (13%), Positives = 48/199 (24%), Gaps = 48/199 (24%)
Query: 303 DGSMLAIKRLSACKLGEKQFLLEMKQV-GLLKHPNLEKP-----------LVYKYMSNGT 350
+ +K E ++ + K LV + S GT
Sbjct: 94 NKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGT 153
Query: 351 LYSLLHSNGNTA---LDWPSRLRIGLGAARGLSWLHHC--CHPP------CLHQNISSSV 399
L + ++ NT + + + + +H C H L
Sbjct: 154 LLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD 213
Query: 400 ILVDEDFDARIMDFGFSR-------------------------LTNGDASLQKDVHGFGV 434
D ++D G S L+N + Q D G
Sbjct: 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAA 273
Query: 435 VLLELVTGQKPFEINASEE 453
+ ++ G N E
Sbjct: 274 TVYCMLFGTYMKVKNEGGE 292
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 21/160 (13%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL----KHPN--------LEKP 340
G+ +K + LDG + AIKR G +++V +H + E
Sbjct: 25 GSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD 84
Query: 341 LVY---KYMSNGTLYSLL--HSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
+ +Y + G+L + + + + L RGL ++H +H +I
Sbjct: 85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDI 141
Query: 396 SSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVV 435
S I + + + G V
Sbjct: 142 KPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 54/187 (28%)
Query: 304 GSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPN-------LEKP----LVYKYMSNG 349
G +AIK + +L ++ E++ + +L HPN +E L+ +Y S G
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 350 TLYSLLHSNGNTALDWPSRLRIGLGAARG-----LSWLHHCCHPPCL-HQNISSSVILVD 403
++ L ++G R+ AR +S + +C H + H+++ + +L+D
Sbjct: 100 EVFDYLVAHG----------RMKEKEARSKFRQIVSAVQYC-HQKRIVHRDLKAENLLLD 148
Query: 404 EDFDARIMDFGFSRLTNGDASL-----------------------QKDVHGFGVVLLELV 440
D + +I DFGFS L + DV GV+L LV
Sbjct: 149 ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Query: 441 TGQKPFE 447
+G PF+
Sbjct: 209 SGSLPFD 215
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.98 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.97 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.97 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.97 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.97 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.96 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.91 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.89 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.87 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.85 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.85 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.84 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.82 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.79 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.78 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.76 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.76 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.75 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.74 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.71 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.7 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.68 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.66 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.66 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.65 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.64 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.63 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.62 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.62 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.62 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.62 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.61 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.61 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.61 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.59 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.59 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.58 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.58 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.58 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.58 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.57 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.57 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.57 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.56 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.55 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.55 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.55 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.55 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.54 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.54 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.54 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.53 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.53 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.52 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.52 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.52 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.52 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.52 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.51 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.51 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.51 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.51 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.51 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.5 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.5 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.5 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.49 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.49 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.49 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.49 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.47 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.47 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.46 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.46 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.45 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.45 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.45 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.45 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.45 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.45 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.44 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.44 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.44 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.44 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.44 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.44 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.43 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.43 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.43 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.43 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.42 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.42 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.42 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.42 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.41 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.4 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.4 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.4 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.4 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.39 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.39 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.38 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.38 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.36 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.36 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.35 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.34 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.34 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.33 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.32 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.32 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.32 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.3 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.3 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.29 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.29 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.28 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.27 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.27 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.26 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.26 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.24 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.24 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.24 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.23 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.22 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.21 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.19 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.18 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.18 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.17 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.16 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.15 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.14 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.13 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.1 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.09 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.06 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.05 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.02 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.0 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.97 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.95 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.86 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.86 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.81 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.78 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.68 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.66 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.56 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.55 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.48 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.45 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.44 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.43 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.33 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.23 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.16 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.12 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.1 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.91 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.89 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 97.86 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.79 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.71 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.7 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.65 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.65 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.55 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.52 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.37 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.22 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.11 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.02 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.99 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.97 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.87 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.81 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.69 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 96.61 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.56 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.55 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.53 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.53 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 96.45 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.44 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.37 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.33 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 95.99 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 95.98 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 95.74 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.16 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 95.08 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 95.0 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 94.8 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 94.11 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 94.06 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 92.32 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 92.0 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 91.44 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 91.41 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 86.56 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 83.58 |
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-48 Score=384.23 Aligned_cols=225 Identities=24% Similarity=0.385 Sum_probs=178.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|...+.||+|+||.||+|++. ++..||||+++... ...++|.+|+++|++++|||| ..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 35667789999999999999863 36789999997543 335679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 342 VYKYMSNGTLYSLLHSNG-----------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
|||||++|+|.++|+..+ ...++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 3479999999999999999999999 99999999999999999999999
Q ss_pred EeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHH
Q 040267 411 MDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWID 464 (538)
Q Consensus 411 ~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 464 (538)
+|||+|+.... .++.++|||||||++|||+| |+.||...... .+...+
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i- 243 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIECI- 243 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHH-
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHH-
Confidence 99999974321 18899999999999999999 89999864321 122211
Q ss_pred HHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 465 QLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 465 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..+.... .+...+++ +.+++.+||+.||++||||+||.+.|+++.+..+
T Consensus 244 ---~~~~~~~------~p~~~~~~---~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 244 ---TQGRVLQ------RPRTCPQE---VYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp ---HHTCCCC------CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred ---HcCCCCC------CCccchHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 1222111 11122334 4455559999999999999999999999887643
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=384.90 Aligned_cols=223 Identities=25% Similarity=0.383 Sum_probs=174.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|...++||+|+||+||+|++. +++.||||+++... ...++|.+|+++|++++|||| ..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35666788999999999999864 47889999997543 335679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 342 VYKYMSNGTLYSLLHSNG-------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
|||||++|+|.++++... ...++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence 999999999999997643 2369999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+|+.... .++.++|||||||++|||+| |+.||...... .+...
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~ 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----EAIDC 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----HHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----HHHHH
Confidence 9999999985421 18899999999999999999 89999854321 12221
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+ ..+... .. +...+++ +.+|+.+||+.||++||||.||++.|+.+.+.
T Consensus 273 i----~~g~~~-----~~-p~~~~~~---~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 I----TQGREL-----ER-PRACPPE---VYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp H----HHTCCC-----CC-CTTCCHH---HHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred H----HcCCCC-----CC-cccccHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1 111110 11 1122334 44555599999999999999999999998764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-48 Score=382.19 Aligned_cols=218 Identities=22% Similarity=0.340 Sum_probs=173.2
Q ss_pred CCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+...+.||+|+||+||+|.+. +++.||||+++... ...++|.+|+.++++++|||| ..+||
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 344578999999999999863 46789999997533 345789999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
||||++|+|.++|+... ...++|.++++|+.|||.||+|||+ .+||||||||+|||+++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCE
Confidence 99999999999997532 1368999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+|+.... .++.++|||||||++|||+| |+.||...... .+...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-----~~~~~ 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-----DVVEM 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-----HHHHH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 9999999985321 18899999999999999999 89999864321 12222
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
+..+.... .+++....+.+|+.+||+.||++||||.||++.|+..
T Consensus 260 ----i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 ----IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22222111 1112223455566699999999999999999999864
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=373.24 Aligned_cols=226 Identities=24% Similarity=0.351 Sum_probs=175.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~ 346 (538)
+++...+.||+|+||+||+|++.+ .||||.++... ...++|.+|++++++++|||| ..+||||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~ 113 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWC 113 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcC
Confidence 456777899999999999999743 59999997533 234679999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.++++... ..++|.++.+|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 114 ~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 114 EGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp SSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999997654 369999999999999999999999 9999999999999999999999999999975321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||+||+.||...... ..+......+.. .+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--------~~~~~~~~~~~~----~p 257 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--------DQIIFMVGRGYA----SP 257 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--------HHHHHHHHTTCC----CC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcCCC----CC
Confidence 1677999999999999999999999753321 111111211111 11
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.+. ..+......+.+++.+||+.||++||||.||++.|+.+...+
T Consensus 258 ~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 258 DLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred Ccc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 111 011112233445555999999999999999999999886543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=372.79 Aligned_cols=238 Identities=18% Similarity=0.246 Sum_probs=177.4
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------------ccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------KPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~e~ 345 (538)
+|...+.||+|+||+||+|++ +|+.||||+++........+..|+..+.+++||||+ .||||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 456678999999999999998 689999999976443333345577777889999992 3699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-----HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|++|+|.++++... ++|..+.+++.|++.||+|||+.+ .++||||||||+|||+|+++++||+|||+|+...
T Consensus 83 ~~~gsL~~~l~~~~---l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 83 HEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCcHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999998754 999999999999999999999831 3499999999999999999999999999987432
Q ss_pred CC---------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccccc------ccHHH
Q 040267 421 GD---------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK------GNLVN 461 (538)
Q Consensus 421 ~~---------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~------~~~~~ 461 (538)
.. ++.++|||||||++|||+||+.||......+... .....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 10 2457999999999999999988876433221110 00111
Q ss_pred HHHHHhccCCccccccccccCCC-cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKG-YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.+......+.. ++.+.... ..+....+.+|+.+||+.||++||||.||++.|+++.++-+.
T Consensus 240 ~~~~~~~~~~~----rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~i 301 (303)
T 3hmm_A 240 EMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp HHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHhcccC----CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCC
Confidence 22222222111 22221111 224556677788899999999999999999999999876543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=365.12 Aligned_cols=215 Identities=20% Similarity=0.304 Sum_probs=170.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|++++++++|||| ..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788999999999999999995 569999999997543 234679999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
||++|+|.+++...+...+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999987665578999999999999999999999 9999999999999999999999999999986532
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++|||||||++|||+||+.||..... .+.+..... +.... +
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~-~~~~~-----~- 245 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--------KNLVLKIIS-GSFPP-----V- 245 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHH-TCCCC-----C-
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHc-CCCCC-----C-
Confidence 288999999999999999999999985432 122222221 11111 1
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.++.+++. +||+.||++|||+.|+++
T Consensus 246 ~~~~s~~~~~li~---~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 SLHYSYDLRSLVS---QLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 1123445565555 999999999999999986
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=371.37 Aligned_cols=232 Identities=20% Similarity=0.282 Sum_probs=182.2
Q ss_pred HHHHHHHhcCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEccccc--ccHHHHHHHHHHHhcCCC-CCC-----
Q 040267 272 LVHLIAATSNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKH-PNL----- 337 (538)
Q Consensus 272 ~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H-~ni----- 337 (538)
.++.+...++|...+.||+|+||.||+|.+.. ++.||||.++... ...++|.+|+++|.+++| |||
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 34444556788999999999999999998532 3589999997543 234679999999999965 898
Q ss_pred -------cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCC
Q 040267 338 -------EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396 (538)
Q Consensus 338 -------~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 396 (538)
..++|||||++|+|.++|+... ...++|.+++.|+.|||.||+|||+ ++|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccC
Confidence 2369999999999999997532 2358999999999999999999999 999999999
Q ss_pred CCCeeeCCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCc
Q 040267 397 SSVILVDEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINA 450 (538)
Q Consensus 397 p~NIll~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~ 450 (538)
|+|||+++++.+||+|||+|+..... ++.++|||||||++|||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999865321 8899999999999999998 999998643
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+ .+ ...+..+.... . ++..+++ +.+++.+||+.||++||||.||++.|+++.+.
T Consensus 293 ~~~----~~----~~~i~~g~~~~-----~-p~~~~~~---~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 293 IDE----EF----CRRLKEGTRMR-----A-PDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CSH----HH----HHHHHHTCCCC-----C-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH----HH----HHHHHcCCCCC-----C-CccCCHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 211 11 12222221111 1 1222334 44555599999999999999999999998765
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=352.05 Aligned_cols=212 Identities=21% Similarity=0.275 Sum_probs=167.2
Q ss_pred CCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------ccEEE
Q 040267 283 SAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------KPLVY 343 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~ 343 (538)
...++||+|+||+||+|.. .++..||+|.+.... ...++|.+|++++++++||||+ .||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 3446799999999999995 468999999996533 2346799999999999999993 36899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeC-CCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVD-EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~ 420 (538)
|||++|+|.++++..+ .+++..+..|+.||+.||+|||+ .+ ||||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999998765 69999999999999999999998 66 99999999999998 47999999999998543
Q ss_pred CC--------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 421 GD--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 421 ~~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.. ++.++|||||||++|||+||+.||..... ..... .....+.....++
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~-~~i~~~~~~~~~~--- 252 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIY-RRVTSGVKPASFD--- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHH-HHHTTTCCCGGGG---
T ss_pred CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHH-HHHHcCCCCCCCC---
Confidence 21 88999999999999999999999975322 11111 1122211111111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++.+++. +||+.||++|||+.|+++
T Consensus 253 --~~~~~~~~~li~---~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 --KVAIPEVKEIIE---GCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GCCCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred --ccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 122334555555 999999999999999875
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=360.50 Aligned_cols=221 Identities=17% Similarity=0.195 Sum_probs=176.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeecC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYMS 347 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~~ 347 (538)
+.|...++||+|+||.||+|+. .+|+.||||+++.... ..+|+.++++++||||+ .|||||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 4577778999999999999995 4699999999975432 24799999999999993 469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccCC-----
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTNG----- 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~----- 421 (538)
+|+|.++++..+ .+++.++..|+.||+.||+|||+ .+||||||||+|||++.++ .+||+|||+|+....
T Consensus 134 gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 134 GGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999998765 69999999999999999999999 9999999999999999987 699999999975321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||+||+.||......+. +. .+ ... ... . .
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~-~i---~~~-~~~-~--~ 276 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CL-KI---ASE-PPP-I--R 276 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HH-HH---HHS-CCG-G--G
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HH-HH---HcC-CCC-c--h
Confidence 188999999999999999999999986443221 11 11 111 100 0 0
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.+ ....+.++.++++ +||+.||++|||+.|+++.|....++.+
T Consensus 277 ~~-~~~~s~~~~~li~---~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 277 EI-PPSCAPLTAQAIQ---EGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp GS-CTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred hc-CccCCHHHHHHHH---HHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 11 1223445555555 9999999999999999999998877654
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=359.49 Aligned_cols=213 Identities=19% Similarity=0.312 Sum_probs=172.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
..|+..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||| ..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4588888999999999999995 469999999996533 334668899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++... .+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+.+...
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc
Confidence 999999999864 49999999999999999999999 99999999999999999999999999999865321
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC-
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG- 482 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~- 482 (538)
|+.++|||||||++|||++|+.||......+ + ...... +. .+.+..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-----~---~~~i~~-~~-----~~~~~~~ 293 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----A---MKMIRD-NL-----PPRLKNL 293 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----H---HHHHHH-SS-----CCCCSCG
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----H---HHHHHc-CC-----CCCCCcc
Confidence 8899999999999999999999998643211 1 111111 10 111110
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++.++++ +||+.||++|||+.|+++
T Consensus 294 ~~~s~~~~dli~---~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLD---RLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 112345566655 999999999999999876
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=343.83 Aligned_cols=211 Identities=19% Similarity=0.307 Sum_probs=165.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
++|+..+.||+|+||+||+|+. .+|+.||||.+++.. ...+++.+|++++++++||||+ .|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5899999999999999999994 569999999996532 2346799999999999999993 46999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+ +|+|.+++...+ .+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 689999998766 69999999999999999999999 99999999999999999999999999999854321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||+||++|||+||+.||..... ....... ..+.. .+
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i-~~~~~------~~ 231 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNI-SNGVY------TL 231 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH-HHTCC------CC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHH-HcCCC------CC
Confidence 35789999999999999999999975332 1112111 11111 11
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....++++.++++ +||+.||++|||++|+++
T Consensus 232 -p~~~s~~~~~li~---~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 -PKFLSPGAAGLIK---RMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -CTTSCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred -CCCCCHHHHHHHH---HHccCChhHCcCHHHHHc
Confidence 1223445566655 999999999999999986
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-44 Score=352.68 Aligned_cols=212 Identities=18% Similarity=0.253 Sum_probs=173.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||+||+|+. .+|+.||||++.+. ....+.+.+|+++|++++|||| ..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4699999999999999999995 56999999999743 2345679999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|||++|+|.+++...+ .+++.++..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999998765 59999999999999999999999 99999999999999999999999999999865311
Q ss_pred ------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
++.++||||+||++|||+||+.||...+.. ....... .+.+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~-~~~~------ 251 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--------LIFAKII-KLEY------ 251 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HTCC------
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-cCCC------
Confidence 788999999999999999999999854321 1111111 1111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+. +..++++.++++ +||+.||++|||++|++.
T Consensus 252 ~~p-~~~s~~~~dli~---~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 252 DFP-EKFFPKARDLVE---KLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CCC-TTCCHHHHHHHH---HHSCSSGGGSTTSGGGTC
T ss_pred CCC-cccCHHHHHHHH---HHccCCHhHCcChHHHcC
Confidence 111 123445666666 999999999999998753
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=360.58 Aligned_cols=213 Identities=19% Similarity=0.309 Sum_probs=173.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
+.|+..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||| ..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4688889999999999999995 469999999997533 345668999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.++++.. .+++.++..|+.||+.||+|||+ .+||||||||+||||+.++.+||+|||+|+.+...
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 999999999865 49999999999999999999999 99999999999999999999999999999865321
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc-C
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT-G 482 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~ 482 (538)
|+.++|||||||++|||++|+.||......+ ....... + ..+.+. .
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--------~~~~i~~-~-----~~~~~~~~ 370 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--------AMKMIRD-N-----LPPRLKNL 370 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHH-S-----CCCCCSCT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHc-C-----CCCCCccc
Confidence 8899999999999999999999998543211 1111111 1 011111 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++.++++ +||+.||++|||+.|+++
T Consensus 371 ~~~s~~~~dli~---~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLD---RLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 223456666666 999999999999999876
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=346.87 Aligned_cols=207 Identities=19% Similarity=0.278 Sum_probs=161.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
++|+..+.||+|+||+||+|+.. +++.||||.+++.. ....++.+|++++++++|||| ..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46889999999999999999852 47899999997532 223568899999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|||||++|+|.+++...+ .+++.++..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999998765 69999999999999999999999 9999999999999999999999999999985321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||+||++|||+||+.||...+.. +...... .+..
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~-~~~~------ 243 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--------ETMTMIL-KAKL------ 243 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HCCC------
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--------HHHHHHH-cCCC------
Confidence 1889999999999999999999999864322 1111111 1111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
.. ....+.++.++++ +||+.||++|||+
T Consensus 244 ~~-p~~~s~~~~~li~---~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 GM-PQFLSPEAQSLLR---MLFKRNPANRLGA 271 (304)
T ss_dssp CC-CTTSCHHHHHHHH---HHTCSSGGGSTTC
T ss_pred CC-CCcCCHHHHHHHH---HHcccCHHHCCCC
Confidence 01 1223445666666 9999999999985
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=342.73 Aligned_cols=258 Identities=37% Similarity=0.640 Sum_probs=220.1
Q ss_pred cccccCHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------
Q 040267 266 PLIKLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------ 337 (538)
Q Consensus 266 ~~~~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------ 337 (538)
....+++.++...+++|...+.||+|+||.||+|...+++.||||++.... ....++.+|++++++++||||
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 345788899999999999999999999999999998789999999997533 223468999999999999999
Q ss_pred -----cccEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEE
Q 040267 338 -----EKPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARI 410 (538)
Q Consensus 338 -----~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 410 (538)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 3469999999999999998754 245999999999999999999999933339999999999999999999999
Q ss_pred EeccCCcccCCC------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 411 MDFGFSRLTNGD------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 411 ~Dfg~a~~~~~~------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
+|||+++..... ++.++||||||+++|||+||+.||...............|+...
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999754321 57789999999999999999999974333333445678888887
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
........+.+..+...........+.+++.+||+.||++|||+.||++.|++....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 777788888888888888888889999999999999999999999999999875433
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=335.49 Aligned_cols=213 Identities=19% Similarity=0.280 Sum_probs=160.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE------------------ 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~------------------ 338 (538)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|+++|++++||||+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4588889999999999999995 569999999996433 2346789999999999999992
Q ss_pred -----ccEEEeecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 339 -----KPLVYKYMSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 339 -----~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
.|+|||||++|+|.+++..... ...++..++.|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence 3689999999999999987652 235677789999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCC-----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccc
Q 040267 413 FGFSRLTNG-----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG 457 (538)
Q Consensus 413 fg~a~~~~~-----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~ 457 (538)
||+|+.... .++.++|||||||++|||++ ||.....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~------ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME------ 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH------
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH------
Confidence 999975321 18899999999999999996 7753110
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.. ......... .........+++.+||+.||++|||+.|+++
T Consensus 233 -~~~~~~~-~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 -RVRTLTD-VRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHH-HHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHH-HhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0111111 111111110 1112222344566999999999999999976
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=332.68 Aligned_cols=250 Identities=32% Similarity=0.537 Sum_probs=212.7
Q ss_pred ccCHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC----------
Q 040267 269 KLKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL---------- 337 (538)
Q Consensus 269 ~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni---------- 337 (538)
.+.+.++...+++|...+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 345556677889999999999999999999998889999999987543 335679999999999999999
Q ss_pred -cccEEEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..++||||+++|+|.+++.... ...++|.++.+++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 3469999999999999997654 2359999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 415 FSRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 415 ~a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
+++.... .++.++||||||+++|||+||+.||......+ ......|.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--MVNLAEWAVESHNN 262 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS--CCCHHHHTHHHHTT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH--HHHHHHHhhhcccc
Confidence 9874321 16789999999999999999999998654432 23566777666666
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+.+...+++.+......+....+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 777778887777777778888888999999999999999999999999998754
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=341.28 Aligned_cols=165 Identities=23% Similarity=0.335 Sum_probs=145.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|...+.||+|+||+||+|+. .+|+.||||+++.... ..+++.+|+++|++++||||+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688899999999999999995 5799999999975432 235688999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|||||||+ |+|.+++...+ .+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 269999996 68999998765 69999999999999999999999 9999999999999999999999999999975
Q ss_pred cCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 419 TNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 419 ~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.. .++.++||||+||++|||++|+.||.+.+
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~ 267 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence 321 16889999999999999999999998644
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=323.20 Aligned_cols=236 Identities=21% Similarity=0.250 Sum_probs=181.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~ 343 (538)
.++|...+.||+|+||.||+|+.. ++.||||+++........+..|+.++++++||||+ .++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 346788899999999999999874 78999999986555556677899999999999992 37999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CccccCCCCCCeeeCCCCCeEEEec
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP----------PCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~----------~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
||+++|+|.++++... +++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 102 e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 102 AFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp ECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred ecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999998754 9999999999999999999999 7 9999999999999999999999999
Q ss_pred cCCcccCCC------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccccc-------
Q 040267 414 GFSRLTNGD------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK------- 456 (538)
Q Consensus 414 g~a~~~~~~------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~------- 456 (538)
|+++..... ++.++|||||||++|||+||+.||..........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999643211 2346799999999999999999998644322111
Q ss_pred -ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 457 -GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 457 -~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.....+..... .......+...... ......+.+++.+||+.||++|||+.||++.|+++.+..+
T Consensus 256 ~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~~ 321 (322)
T 3soc_A 256 HPSLEDMQEVVV-HKKKRPVLRDYWQK---HAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTN 321 (322)
T ss_dssp SCCHHHHHHHHT-TSCCCCCCCGGGGS---SHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CCchhhhhhhhh-cccCCCCccccccc---cchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 01122222111 11111111111111 1234446666669999999999999999999999987654
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=325.56 Aligned_cols=167 Identities=17% Similarity=0.287 Sum_probs=143.7
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEe----CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------c
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------E 338 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~ 338 (538)
+....+.|...+.||+|+||+||+|+. .+++.||+|.+.... ...++.+|+++|..+ +|||| .
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 334567899999999999999999984 246789999987543 356788999999998 69999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSR 417 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~ 417 (538)
.|+||||+++|+|.+++. .+++.++..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+|||+|+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 469999999999999994 48999999999999999999999 999999999999999876 799999999996
Q ss_pred ccC----------------------------------------------------CCCCCccCcccHHHHHHHHHhCCCC
Q 040267 418 LTN----------------------------------------------------GDASLQKDVHGFGVVLLELVTGQKP 445 (538)
Q Consensus 418 ~~~----------------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p 445 (538)
... ..++.++||||+||++|||+||+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 321 0178899999999999999999999
Q ss_pred CCCCc
Q 040267 446 FEINA 450 (538)
Q Consensus 446 ~~~~~ 450 (538)
|....
T Consensus 247 f~~~~ 251 (361)
T 4f9c_A 247 FYKAS 251 (361)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 97543
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=311.67 Aligned_cols=247 Identities=29% Similarity=0.483 Sum_probs=198.4
Q ss_pred ccccCHHHHHHHhcCCCCC------CeEeecCCceEEEEEeCCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCC
Q 040267 267 LIKLKLVHLIAATSNFSAQ------NVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHP 335 (538)
Q Consensus 267 ~~~~~~~~l~~~~~~f~~~------~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ 335 (538)
...|++.++..++++|... +.||+|+||.||+|.. +++.||||.+.... ...+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3468999999999999988 8999999999999987 68899999986422 2346799999999999999
Q ss_pred CC-----------cccEEEeecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 336 NL-----------EKPLVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 336 ni-----------~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
|| ..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEc
Confidence 99 3469999999999999997532 2469999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCCC------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH
Q 040267 404 EDFDARIMDFGFSRLTNGD------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL 459 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 459 (538)
+++.+||+|||+++..... ++.++||||||+++|||++|+.||....... .+
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~ 243 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ----LL 243 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS----BT
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchH----HH
Confidence 9999999999998754321 5778999999999999999999998644322 12
Q ss_pred HHHHHHHhc-cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 460 VNWIDQLSS-SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 460 ~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
..+...... ...+.+.+++.+. .........+.+++.+||+.||.+|||+.+|++.|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 222222211 1223344444432 3345566677788889999999999999999999998754
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=337.33 Aligned_cols=228 Identities=20% Similarity=0.388 Sum_probs=184.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecC
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMS 347 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~ 347 (538)
..++|...+.||+|+||.||+|...++..||||.++......++|.+|++++++++|||| ..++||||++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~ 265 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA 265 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecC
Confidence 456778889999999999999999888999999998766677899999999999999999 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.++++......+++..+.+++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 9999999986543358999999999999999999999 9999999999999999999999999999986432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||+| |+.||...... .+...+. ...... ..
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~---~~~~~~-------~~ 407 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALE---RGYRMP-------RP 407 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHH---HTCCCC-------CC
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH---cCCCCC-------CC
Confidence 16789999999999999999 99999753321 1111111 110100 01
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
...+++ +.+++.+||+.||++|||+.+|++.|+++......
T Consensus 408 ~~~~~~---l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~ 448 (454)
T 1qcf_A 408 ENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448 (454)
T ss_dssp TTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred CCCCHH---HHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence 122334 44555599999999999999999999988765443
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=309.48 Aligned_cols=222 Identities=23% Similarity=0.385 Sum_probs=181.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|...+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++|||| ..++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 4577788999999999999998888999999998777677889999999999999999 33699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 90 GCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp CBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999997654 368999999999999999999999 9999999999999999999999999999975422
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++ |+.||...... ........... .. ...
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~~------~~-~~~ 230 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR------LY-KPR 230 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC------CC-CCT
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCcc------CC-CCC
Confidence 16789999999999999999 99999753321 11111111100 00 111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+..+.++ +.+||+.||++|||+.|+++.|+++.++
T Consensus 231 ~~~~~~~~l---i~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LASTHVYQI---MNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TSCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHH---HHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 223444444 4499999999999999999999998864
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=324.13 Aligned_cols=225 Identities=22% Similarity=0.355 Sum_probs=172.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
.++|...+.||+|+||.||+|+.. ++..||||.++... ...+++.+|++++++++|||| ..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999854 47789999997532 234679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.++++..+ ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999998654 369999999999999999999999 9999999999999999999999999999875421
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++||||||+++|||++ |+.||...... .+...+ ..+.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~i----~~~~--- 267 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAV----DEGY--- 267 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHHH----HTTE---
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH----HcCC---
Confidence 16778999999999999998 99999753321 111111 1110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
...........+.+++.+||+.||++||++.||++.|+++.+..+
T Consensus 268 ------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 268 ------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp ------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred ------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 001111122335556669999999999999999999999977543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=336.73 Aligned_cols=216 Identities=19% Similarity=0.243 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHH---HHHHHhcCCCCCCc-----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLL---EMKQVGLLKHPNLE-----------K 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~---E~~~l~~l~H~ni~-----------~ 339 (538)
.++|...++||+|+||.||+|+. .+|+.||||++++.. .....+.+ ++.+++.++||||+ .
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999995 469999999996432 22233333 46777888999993 4
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+|||||+||+|.+++...+ .+++..+..|+.||+.||+|||+ .+||||||||+||||+.+|.+||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 69999999999999998765 69999999999999999999999 99999999999999999999999999999854
Q ss_pred CC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 420 NG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 420 ~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.. .++.++||||+||++|||++|+.||......+ ......... ....
T Consensus 343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~-~~~~----- 411 (689)
T 3v5w_A 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTL-TMAV----- 411 (689)
T ss_dssp SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHH-HCCC-----
T ss_pred CCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhc-CCCC-----
Confidence 32 17889999999999999999999997533211 111111111 1111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
.+ ....+.++.++++ +||+.||.+|++ ++||++
T Consensus 412 -~~-p~~~S~~a~dLI~---~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 -EL-PDSFSPELRSLLE---GLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -CC-CTTSCHHHHHHHH---HHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -CC-CccCCHHHHHHHH---HHccCCHhHCCCCCCCCHHHHhc
Confidence 11 1223456666666 999999999998 677765
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=312.89 Aligned_cols=230 Identities=26% Similarity=0.428 Sum_probs=175.2
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
...++|...+.||+|+||.||+|.. +++.||||.+...... .+++.+|++++++++|||| ..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788889999999999999987 6889999999754322 3568899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999987541 248999999999999999999999 78 999999999999999999999999998643
Q ss_pred CC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 420 NG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 420 ~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.. .++.++||||||+++|||++|+.||...... .. ...........
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~---~~~~~~~~~~~--- 258 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QV---VAAVGFKCKRL--- 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HH---HHHHHHSCCCC---
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HH---HHHHHhcCCCC---
Confidence 21 1678999999999999999999999853321 11 11111111100
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
.+ ....+.++.+++ .+||+.||++|||+.|+++.|+.+.+....+
T Consensus 259 --~~-~~~~~~~l~~li---~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 259 --EI-PRNLNPQVAAII---EGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp --CC-CTTSCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred --CC-CccCCHHHHHHH---HHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 11 112233444444 4999999999999999999999998765444
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=316.03 Aligned_cols=225 Identities=24% Similarity=0.376 Sum_probs=177.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||.||+|... .+..||||.++... ...+.+.+|++++++++|||| ..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45777899999999999999964 34469999997532 334679999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
|||+++|+|.++++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 129 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred eeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999997653 369999999999999999999999 99999999999999999999999999999854321
Q ss_pred --------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 423 --------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 423 --------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
++.++||||||+++|||++ |+.||...... .+ ..........
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~---~~~~~~~~~~--- 273 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DV---ISSVEEGYRL--- 273 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HH---HHHHHTTCCC---
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HH---HHHHHcCCCC---
Confidence 5678999999999999999 99999753321 11 1111111000
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.. ....++++ .+++.+||+.||++|||+.||++.|+.+.+....
T Consensus 274 ---~~-~~~~~~~l---~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 274 ---PA-PMGCPHAL---HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ---CC-CTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ---CC-CCCcCHHH---HHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 00 11223344 4455599999999999999999999999876543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-38 Score=336.06 Aligned_cols=217 Identities=18% Similarity=0.327 Sum_probs=173.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|+++|+.++||||+ .|+|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 5789999999999999999995 569999999997543 3356788999999999999993 46999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC--CCeEEEeccCCcccCCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED--FDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~-- 422 (538)
++|+|.+++.... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 237 ~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 237 SGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999997543 269999999999999999999999 999999999999999854 89999999999865432
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++||||+||++|||++|+.||......+ ...... ..... ++... .
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~--------~~~~i~-~~~~~--~~~~~-~ 380 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--------TLRNVK-SCDWN--MDDSA-F 380 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHH-TTCCC--CCSGG-G
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHH-hCCCC--CCccc-c
Confidence 7889999999999999999999998643321 111111 11110 01111 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++.++++ +||+.||.+|||+.|+++
T Consensus 381 ~~~s~~~~dli~---~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 SGISEDGKDFIR---KLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred cCCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 123445566665 999999999999999986
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=333.22 Aligned_cols=228 Identities=22% Similarity=0.378 Sum_probs=182.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSN 348 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~ 348 (538)
.++|...+.||+|+||.||+|...++..||||.++......++|.+|++++++++|||| ..++||||+++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~ 262 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 262 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcC
Confidence 45677788999999999999999888889999998766667889999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 263 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 339 (452)
T 1fmk_A 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339 (452)
T ss_dssp CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceeccc
Confidence 999999986433469999999999999999999999 9999999999999999999999999999985432
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||+| |+.||...... .+ ... ...+... .. ..
T Consensus 340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~---~~~-i~~~~~~-----~~-~~ 404 (452)
T 1fmk_A 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EV---LDQ-VERGYRM-----PC-PP 404 (452)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HH---HHH-HHTTCCC-----CC-CT
T ss_pred CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HH---HHH-HHcCCCC-----CC-CC
Confidence 16789999999999999999 99999753321 11 111 1111100 00 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
..++. +.+++.+||+.||++|||+++|++.|+++.......
T Consensus 405 ~~~~~---l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 405 ECPES---LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp TSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred CCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 22334 445555999999999999999999999987655443
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-38 Score=319.77 Aligned_cols=225 Identities=22% Similarity=0.346 Sum_probs=177.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe--------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML--------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
.++|...+.||+|+||.||+|.. .++..||||.++... ...+++.+|+++++++ +||||
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35678889999999999999984 235579999997543 2346789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
..++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 3469999999999999998653 1358999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
+.++.+||+|||+++.... .++.++|||||||++|||+| |+.||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 9999999999999974321 16789999999999999999 99999864322
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.+...+ ..+... .. ....+.++. +++.+||+.||++|||+.|+++.|+++....
T Consensus 313 -~~~~~~----~~~~~~-----~~-~~~~~~~l~---~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 313 -ELFKLL----KEGHRM-----DK-PANCTNELY---MMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp -GHHHHH----HTTCCC-----CC-CTTSCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -HHHHHH----hcCCCC-----CC-CCCCCHHHH---HHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 122111 111110 01 111233444 4555999999999999999999999987643
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=325.56 Aligned_cols=224 Identities=23% Similarity=0.370 Sum_probs=178.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc--cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||.||+|... +++.||||.++.... ..+++.+|++++++++|||| ..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356778899999999999999975 689999999975422 23468899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++|+|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999998643 258999999999999999999999 99999999999999999999999999998753321
Q ss_pred -----------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
++.++|||||||++|||+| |+.||...... ..... ...+....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~----~~~~~~~~---- 335 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREF----VEKGGRLP---- 335 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHH----HHTTCCCC----
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH----HHcCCCCC----
Confidence 5678999999999999999 99999753321 11111 11111000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.....++++. +++.+||+.||++|||+.+|++.|+++.++.
T Consensus 336 --~~~~~~~~l~---~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 336 --CPELCPDAVF---RLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --CCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCCCHHHH---HHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0112233444 4555999999999999999999999998754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=337.47 Aligned_cols=226 Identities=21% Similarity=0.370 Sum_probs=183.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC-CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|.... +..||||.++......++|.+|++++++++|||| ..++||||+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 4567788999999999999999754 8899999998766667889999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++.......+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 99999999987665579999999999999999999999 99999999999999999999999999999865321
Q ss_pred --------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
++.++|||||||++|||+| |+.||...... .+...+. .+.. .. .
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~----~~~~-----~~-~ 440 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLE----KDYR-----ME-R 440 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHH----TTCC-----CC-C
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH----cCCC-----CC-C
Confidence 5678999999999999999 99999764321 1222221 1100 00 0
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
....+++ +.+++.+||+.||++|||+.+|++.|+.+.++..
T Consensus 441 ~~~~~~~---l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 481 (495)
T 1opk_A 441 PEGCPEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481 (495)
T ss_dssp CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSSC
T ss_pred CCCCCHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHHhccc
Confidence 1122334 4455559999999999999999999998765443
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=309.42 Aligned_cols=232 Identities=22% Similarity=0.302 Sum_probs=176.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
++|...+.||+|+||.||+|++ .+++.||||++.... ...+.+.+|++++++++||||+ .+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4677789999999999999984 358899999997543 3346789999999999999992 46
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999998764 258999999999999999999999 999999999999999999999999999998542
Q ss_pred C--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccc-------cccccHHHHHHHHh
Q 040267 421 G--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEE-------GYKGNLVNWIDQLS 467 (538)
Q Consensus 421 ~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 467 (538)
. .++.++||||||+++|||+||..|+....... .........+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 2 16789999999999999999999987432110 00001111111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+... . .....++++. +++.+||+.||++|||+.|+++.|+++.+++
T Consensus 246 ~~~~~~-----~-~~~~~~~~l~---~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 246 KNNGRL-----P-RPDGCPDEIY---MIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HTTCCC-----C-CCTTCCHHHH---HHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hccCcC-----C-CCcCcCHHHH---HHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 111100 0 0112233444 4555999999999999999999999998765
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-38 Score=308.20 Aligned_cols=223 Identities=19% Similarity=0.303 Sum_probs=178.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.++|...+.||+|+||.||+|...++..||+|.++......+++.+|++++.+++|||| ..++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 44677789999999999999999888899999998777677889999999999999999 3469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 103 NGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp TCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 999999997633 259999999999999999999999 9999999999999999999999999999975422
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||+| |+.||...... ........ +. .. ...
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~-~~-----~~-~~~ 243 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQ-GL-----RL-YRP 243 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHT-TC-----CC-CCC
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhc-cc-----CC-CCC
Confidence 16789999999999999998 99999753321 11111111 10 00 011
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...++.+. +++.+||+.||++|||+.|+++.|+++.++
T Consensus 244 ~~~~~~l~---~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVY---TIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHH---HHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHH---HHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 12233444 455599999999999999999999998765
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=301.48 Aligned_cols=223 Identities=24% Similarity=0.400 Sum_probs=181.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMS 347 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~ 347 (538)
.++|...+.||+|+||.||+|...++..||+|.++......+++.+|++++.+++|||| ..++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 35677889999999999999998888899999998777677889999999999999999 3369999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-----
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD----- 422 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----- 422 (538)
+|+|.+++...+ ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 87 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 87 NGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999997653 258999999999999999999999 99999999999999999999999999999754321
Q ss_pred -------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++||||||+++|||+| |+.||...... ........... . ...
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~---~----~~~ 227 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR---L----YRP 227 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC---C----CCC
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC---C----CCC
Confidence 5679999999999999999 99999753321 11111111110 0 011
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...++.+.+ ++.+||+.||++|||+.|+++.|+++.++
T Consensus 228 ~~~~~~l~~---li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 HLASDTIYQ---IMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTSCHHHHH---HHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CcChHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 122344444 44599999999999999999999988754
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=327.23 Aligned_cols=222 Identities=22% Similarity=0.360 Sum_probs=179.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|.. .++.||||.++... ..+.|.+|++++++++|||| ..++||||+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 45677889999999999999998 47899999998644 45789999999999999999 246999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.+++...+...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 99999999987665558999999999999999999999 9999999999999999999999999999874322
Q ss_pred ---------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ---------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ---------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++|||||||++|||+| |+.||...... .+...+ ..+... . .....
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i----~~~~~~-----~-~p~~~ 411 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRV----EKGYKM-----D-APDGC 411 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----THHHHH----HTTCCC-----C-CCTTC
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH----HcCCCC-----C-CCCcC
Confidence 17889999999999999999 99999854322 122211 111100 0 01122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+.++. +++.+||+.||++|||+.++++.|+++...
T Consensus 412 ~~~l~---~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 412 PPAVY---DVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 33444 455599999999999999999999998754
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=306.84 Aligned_cols=226 Identities=23% Similarity=0.354 Sum_probs=171.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhc--CCCCCCc---------------ccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGL--LKHPNLE---------------KPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~ni~---------------~~l 341 (538)
.++|...+.||+|+||.||+|+. +++.||||++.... ...+..|.+++.. ++||||. .++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 45788889999999999999998 78999999987533 4556666666665 7999992 359
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH--------HCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
||||+++|+|.++++.. .+++..+.+++.|++.||+||| + .+|+||||||+|||++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeC
Confidence 99999999999999654 4999999999999999999999 7 99999999999999999999999999
Q ss_pred cCCcccCCC---------------------------------CCCccCcccHHHHHHHHHhC----------CCCCCCCc
Q 040267 414 GFSRLTNGD---------------------------------ASLQKDVHGFGVVLLELVTG----------QKPFEINA 450 (538)
Q Consensus 414 g~a~~~~~~---------------------------------~~~~~DV~S~Gvvl~elltg----------~~p~~~~~ 450 (538)
|+++..... ++.++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 998632110 12589999999999999999 78886533
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.... ................. +.... ........+.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~~---~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDP---SFEDMRKVVCVDQQRPN-IPNRW---FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSC---CHHHHHHHHTTSCCCCC-CCGGG---GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCc---chhhhhHHHhccCCCCC-CChhh---ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3221 11111111111111111 11110 1223445566677799999999999999999999976
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=304.00 Aligned_cols=225 Identities=24% Similarity=0.380 Sum_probs=180.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc-cccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC-KLGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+... ....+.+.+|++++++++||||+ .++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4677789999999999999996 46899999988653 34456799999999999999993 36999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC------
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------ 420 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------ 420 (538)
++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 90 KGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999998754 369999999999999999999999 999999999999999999999999999996431
Q ss_pred -------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCccccccc-ccHHHHHHHHhc
Q 040267 421 -------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK-GNLVNWIDQLSS 468 (538)
Q Consensus 421 -------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~ 468 (538)
..++.++||||||+++|||++|..|+.......... ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-- 243 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY-- 243 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--
Confidence 116789999999999999999999987644332211 1122221111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.. ...+.. +.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 244 -----------~~-~~~~~~---l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 244 -----------CP-PNCPPS---FFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp -----------CC-TTCCTT---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----------CC-CCCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 01 111223 4445559999999999999999999999987653
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=316.80 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=183.9
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC------CCEEEEEEcccccc------------cHHHHHHHHHHHhcCCCCCCc-
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD------GSMLAIKRLSACKL------------GEKQFLLEMKQVGLLKHPNLE- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~H~ni~- 338 (538)
..++|...+.||+|+||.||+|...+ ++.||||.+..... ....+..|+..+..++||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578888999999999999998654 47899999865321 112344566677888999992
Q ss_pred --------------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-
Q 040267 339 --------------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD- 403 (538)
Q Consensus 339 --------------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~- 403 (538)
.++||||+ +|+|.+++.... ..+++.+++.|+.|++.||+|||+ .+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEec
Confidence 47999999 999999998753 369999999999999999999999 9999999999999999
Q ss_pred -CCCCeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 404 -EDFDARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 404 -~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
.++.+||+|||+++.... .++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999964311 1678899999999999999999999853221
Q ss_pred ccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 453 EGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
.....+..... ...+..++++.+.....++++..+++ .||+.||.+||++.+|++.|+++.++.+...+
T Consensus 268 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~---~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 268 ----PKYVRDSKIRY-RENIASLMDKCFPAANAPGEIAKYME---TVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp ----HHHHHHHHHHH-HHCHHHHHHHHSCTTCCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred ----HHHHHHHHHHh-hhhHHHHHHHhcccccCHHHHHHHHH---HHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 11222221111 12344455555544444556666555 99999999999999999999999998877654
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=301.85 Aligned_cols=215 Identities=18% Similarity=0.320 Sum_probs=171.3
Q ss_pred hcCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|. ..+++.||||.+.... ...+.+.+|+.++++++||||+ .++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4578899999999999999999 4579999999986433 3456789999999999999993 3699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... +++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 99 ~~~~~L~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp CTTCBHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred CCCCCHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 99999999998753 8999999999999999999999 9999999999999999999999999999875432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||+||+.||...... .........+.. .... .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~-~~~~----~ 239 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGTP-ELQN----P 239 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHHCSC-CCSC----G
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC-CCCC----c
Confidence 1678999999999999999999999753321 111111111110 0000 0
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+..+.+ ++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~---li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRD---FLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHH---HHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHH---HHHHHccCChhHCcCHHHHhh
Confidence 112334444 445999999999999999986
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=305.82 Aligned_cols=226 Identities=22% Similarity=0.386 Sum_probs=182.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCC
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSN 348 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~ 348 (538)
.++|...+.||+|+||.||+|...++..||+|.++......+.+.+|++++++++|||| ..++||||+++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN 91 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCC
Confidence 34677889999999999999998888899999998766667889999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------ 422 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------ 422 (538)
|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 999999976433358999999999999999999999 99999999999999999999999999999754321
Q ss_pred ------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 ------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 ------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
++.++||||||+++|||++ |+.||...... ....... .+. . .. ...
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~-~~~-~----~~-~~~ 233 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLE-RGY-R----MV-RPD 233 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHH-TTC-C----CC-CCT
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHh-ccc-C----CC-Ccc
Confidence 5668999999999999999 99999753221 1111111 110 0 00 111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..++++.+ ++.+|++.||++|||+.++++.|+++.....
T Consensus 234 ~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 234 NCPEELYQ---LMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred cccHHHHH---HHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 22334444 5559999999999999999999999887654
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=301.43 Aligned_cols=222 Identities=24% Similarity=0.388 Sum_probs=181.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|...+.||+|+||.||+|...+++.||+|.++......+++.+|++++++++|||| ..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 4577788999999999999998888899999998776667889999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 88 GCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp CBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999998754 368999999999999999999999 9999999999999999999999999999875421
Q ss_pred -----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++||||||+++|||++ |+.||...... ........ +. . .. ...
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~i~~-~~-~----~~-~~~ 228 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDIST-GF-R----LY-KPR 228 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHT-TC-C----CC-CCT
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--------HHHHHHhc-CC-c----CC-CCc
Confidence 16778999999999999999 89999753221 11111111 10 0 00 111
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..+..+.+ ++.+||+.||++|||+.|+++.|+++.++
T Consensus 229 ~~~~~l~~---li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 229 LASTHVYQ---IMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TSCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22334444 44599999999999999999999998864
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=309.03 Aligned_cols=241 Identities=22% Similarity=0.313 Sum_probs=174.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHH--HHHHhcCCCCCCcc----------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLE--MKQVGLLKHPNLEK----------------P 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E--~~~l~~l~H~ni~~----------------~ 340 (538)
.++|...+.||+|+||.||+|+. +++.||||++.... ...+..| +..+..++||||.+ +
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 35788889999999999999987 78999999997543 3344444 44455689999922 5
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CccccCCCCCCeeeCCCCCeEEE
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP---------PCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~---------~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
+||||+++|+|.+++.... .++..+.+++.|++.||+|||+ . +|+||||||+|||++.++.+||+
T Consensus 89 lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEe
Confidence 8999999999999998765 6899999999999999999999 6 99999999999999999999999
Q ss_pred eccCCcccCCC--------------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccc
Q 040267 412 DFGFSRLTNGD--------------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEE 453 (538)
Q Consensus 412 Dfg~a~~~~~~--------------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~ 453 (538)
|||+++..... ++.++|||||||++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 99999754210 2247899999999999999987765433322
Q ss_pred cccccHH---------HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 454 GYKGNLV---------NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 454 ~~~~~~~---------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
....... ...............+..... ........+.+++.+||+.||++|||+.|+++.|+++...+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 1111110 111111111111111111111 11223445666666999999999999999999999999887
Q ss_pred CCCccc
Q 040267 525 GFSEFY 530 (538)
Q Consensus 525 ~~~~~~ 530 (538)
...+-.
T Consensus 321 ~~~~~~ 326 (336)
T 3g2f_A 321 ERNKSV 326 (336)
T ss_dssp CC----
T ss_pred HhcccC
Confidence 665433
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=302.96 Aligned_cols=225 Identities=18% Similarity=0.267 Sum_probs=178.2
Q ss_pred ccCHHHHHHHhcC----------CCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCC
Q 040267 269 KLKLVHLIAATSN----------FSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPN 336 (538)
Q Consensus 269 ~~~~~~l~~~~~~----------f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~n 336 (538)
.++.+++..+++. |...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 5788888888765 556678999999999999965 79999999997533 44577899999999999999
Q ss_pred C-----------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC
Q 040267 337 L-----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED 405 (538)
Q Consensus 337 i-----------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 405 (538)
| ..++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence 9 346999999999999998754 49999999999999999999999 999999999999999999
Q ss_pred CCeEEEeccCCcccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHH
Q 040267 406 FDARIMDFGFSRLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 406 ~~~kl~Dfg~a~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 462 (538)
+.+||+|||+++.... .++.++||||||+++|||++|+.||...... ..
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--------~~ 249 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--------QA 249 (321)
T ss_dssp CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HH
T ss_pred CcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HH
Confidence 9999999999875432 1678899999999999999999999753221 11
Q ss_pred HHHHhccCCccccccccccC-CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTG-KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...... .. .+.+.. ...+.++.++++ +||+.||++|||+.|+++.
T Consensus 250 ~~~~~~-~~-----~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRD-SP-----PPKLKNSHKVSPVLRDFLE---RMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHH-SS-----CCCCTTGGGSCHHHHHHHH---HHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhc-CC-----CCCcCccccCCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 111111 11 011100 112334445555 9999999999999999874
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=313.44 Aligned_cols=221 Identities=23% Similarity=0.369 Sum_probs=172.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCC----EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGS----MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|+.. +++ .||+|.++... ...+++.+|+.++++++||||+ .++|
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v 94 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 45778899999999999999953 444 36888886432 4457899999999999999993 3589
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++.... ..+++..++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999998754 369999999999999999999999 9999999999999999999999999999875321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++|||||||++|||+| |+.||...... .+...+. .+..
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~----~~~~---- 237 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILE----KGER---- 237 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH----TTCC----
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-----HHHHHHH----cCCC----
Confidence 16789999999999999999 99999864332 1222211 1110
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
..........+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 238 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 -----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00111122345556669999999999999999999999865
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=336.04 Aligned_cols=229 Identities=22% Similarity=0.368 Sum_probs=184.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc----------ccEEEeecC
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMS 347 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~ 347 (538)
..++|...+.||+|+||.||+|...++..||||+++......++|.+|++++++++||||+ .++||||++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~ 344 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 344 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhc
Confidence 3456778889999999999999998888899999987666678899999999999999993 469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------ 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------ 421 (538)
+|+|.++++......+++.++++++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 9999999986433468999999999999999999999 9999999999999999999999999999986532
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||+| |+.||...... .+.. . +..+.... . .
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~---~-i~~~~~~~-----~-~ 486 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD---Q-VERGYRMP-----C-P 486 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHH---H-HHTTCCCC-----C-C
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---H-HHcCCCCC-----C-C
Confidence 16789999999999999999 99999753221 1111 1 11111000 0 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
...+++ +.+++.+||+.||++|||+.+|++.|+++.......
T Consensus 487 ~~~~~~---l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~ 528 (535)
T 2h8h_A 487 PECPES---LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 528 (535)
T ss_dssp TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCS
T ss_pred CCCCHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcc
Confidence 122334 445555999999999999999999999887655443
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=317.32 Aligned_cols=234 Identities=20% Similarity=0.276 Sum_probs=182.8
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC---
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL--- 337 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni--- 337 (538)
+...+.....++|...+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++.++ +||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455556678899999999999999999973 246799999997543 2235699999999999 79999
Q ss_pred ---------cccEEEeecCCCCHHHHhhcCCC------------------------------------------------
Q 040267 338 ---------EKPLVYKYMSNGTLYSLLHSNGN------------------------------------------------ 360 (538)
Q Consensus 338 ---------~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------ 360 (538)
..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 25689999999999999986532
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 361 ----------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 361 ----------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 128999999999999999999999 9999999999999999999999999999975422
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++|||+| |+.||......+ .+... ...+...
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~----~~~~~~~----- 315 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRR----LKEGTRM----- 315 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHH----HHHTCCC-----
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHHH----HHcCCCC-----
Confidence 16789999999999999998 999997543211 11111 1111110
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.. ....+.++. +++.+||+.||++|||+.||++.|+++.+.
T Consensus 316 ~~-~~~~~~~l~---~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 316 RA-PDYTTPEMY---QTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC-CCCCCHHHH---HHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 00 112233444 455599999999999999999999998764
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=308.13 Aligned_cols=230 Identities=21% Similarity=0.366 Sum_probs=186.1
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
..++|...+.||+|+||.||+|... ++..||+|.+.......+++.+|++++++++|||| ..++||||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 3456788899999999999999965 48899999998766667889999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 167 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence 999999999988665679999999999999999999999 99999999999999999999999999999765421
Q ss_pred ---------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||||+++|||++ |+.||...... .+...+.... ....
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~~~---------~~~~ 233 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDY---------RMER 233 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTC---------CCCC
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhccC---------CCCC
Confidence 6778999999999999999 99999754321 1222211100 0000
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
....++.+.+ ++.+|++.||.+|||+.|+++.|+++.++...++
T Consensus 234 -~~~~~~~l~~---li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~~~ 277 (288)
T 3kfa_A 234 -PEGCPEKVYE---LMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277 (288)
T ss_dssp -CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHH---HHHHHhCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 1122334444 4559999999999999999999999887655443
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=299.94 Aligned_cols=222 Identities=22% Similarity=0.356 Sum_probs=175.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+. +++.||||.++... ...+++.+|+.++++++|||| ..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 4677889999999999999998 48899999997543 234579999999999999999 236999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||+++|+|.+++.......+++.++..++.|++.||+|||+ .+ |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999988765569999999999999999999999 77 99999999999999999999999988764332
Q ss_pred C---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 D---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
. ++.++||||||+++|||++|+.||...... .........+. .+..
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~-----~~~~ 232 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--------EIGMKVALEGL-----RPTI 232 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--------HHHHHHHHSCC-----CCCC
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--------HHHHHHHhcCC-----CCCC
Confidence 1 233799999999999999999999753321 11111111111 1111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
. ...+.++.+++ .+||+.||++|||+.|+++.|+++.+
T Consensus 233 ~-~~~~~~~~~li---~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 P-PGISPHVSKLM---KICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp C-TTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred C-CCCCHHHHHHH---HHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 12233444444 49999999999999999999998864
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=306.88 Aligned_cols=214 Identities=20% Similarity=0.345 Sum_probs=172.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+++++.++|||| ..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788889999999999999995 679999999997543 234568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999998765 59999999999999999999999 99999999999999999999999999999754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+.++|||||||++|||++|+.||..... ........ .+... +
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~-~~~~~------~ 233 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--------KELRERVL-RGKYR------I 233 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHH-HCCCC------C
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHH-hCCCC------C
Confidence 34789999999999999999999985332 11121111 11110 0
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+...+.++..+++ +||+.||.+|||++|+++.
T Consensus 234 -p~~~s~~~~~li~---~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 -PFYMSTDCENLLK---RFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CTTSCHHHHHHHH---HHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 1123345555555 9999999999999999863
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=308.43 Aligned_cols=232 Identities=22% Similarity=0.360 Sum_probs=170.4
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCC-CC---EEEEEEcccc---cccHHHHHHHHHHHhcCCCCCCc-----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLD-GS---MLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNLE----------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~-~~---~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni~----------- 338 (538)
...++|...+.||+|+||.||+|.... +. .||||.++.. ....+++.+|++++++++||||+
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345678999999999999999999544 32 8999999753 23356799999999999999991
Q ss_pred ------ccEEEeecCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 339 ------KPLVYKYMSNGTLYSLLHSNG----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 339 ------~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
.++||||+++|+|.+++.... ...+++.++.+++.|++.||+|||+ .+|+||||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCE
Confidence 179999999999999996532 2258999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHH
Q 040267 409 RIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 409 kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 462 (538)
||+|||+++.... .++.++||||||+++|||++ |+.||...... .+...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~ 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-----EIYNY 251 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-----HHHHH
Confidence 9999999975422 16789999999999999999 99999864332 11111
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
+ ...... .. ....++++ .+++.+||+.||++|||+.|+++.|+++.+.......
T Consensus 252 ~---~~~~~~------~~-~~~~~~~l---~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~ 305 (323)
T 3qup_A 252 L---IGGNRL------KQ-PPECMEEV---YDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305 (323)
T ss_dssp H---HTTCCC------CC-CTTCCHHH---HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred H---hcCCCC------CC-CCccCHHH---HHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence 1 111100 00 11122344 4455599999999999999999999999887665543
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=314.79 Aligned_cols=227 Identities=23% Similarity=0.322 Sum_probs=178.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
.++|...+.||+|+||.||+|... ++..||||+++... ...+++.+|+++++++ +||||
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356788899999999999999842 23579999997543 2336789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
..++||||+++|+|.+++..... ..+++.++++|+.|++.||+|||+ .+|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence 34699999999999999987541 359999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
++++.+||+|||+++.... .++.++|||||||++|||++ |+.||......
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 9999999999999975432 16779999999999999999 99999753221
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
..... ...+.... . ....++++.. ++.+||+.||++|||+.||++.|+++......
T Consensus 301 ----~~~~~-~~~~~~~~-----~-~~~~~~~l~~---li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 301 ----ELFKL-LKEGHRMD-----K-PSNCTNELYM---MMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp ----HHHHH-HHTTCCCC-----C-CSSCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred ----HHHHH-HHcCCCCC-----C-CccCCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 11111 11111110 0 1122334444 55599999999999999999999999876543
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-37 Score=306.53 Aligned_cols=224 Identities=23% Similarity=0.353 Sum_probs=177.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.++|...+.||+|+||.||+|.. .++..||||.++... ...+++.+|++++++++|||| ..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45678889999999999999985 235789999997543 234678999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGN----------------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp 397 (538)
++||||+++|+|.+++..... ..+++.++.+++.|++.||+|||+ .+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence 699999999999999986532 248999999999999999999999 9999999999
Q ss_pred CCeeeCCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcc
Q 040267 398 SVILVDEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINAS 451 (538)
Q Consensus 398 ~NIll~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~ 451 (538)
+||++++++.+||+|||+++..... ++.++||||||+++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999754221 5778999999999999999 9999976433
Q ss_pred cccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 452 EEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. .+...+. .+... .. ....++++. +++.+||+.||++|||+.|+++.|+++.++
T Consensus 259 ~-----~~~~~~~----~~~~~-----~~-~~~~~~~~~---~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 E-----RLFNLLK----TGHRM-----ER-PDNCSEEMY---RLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G-----GHHHHHH----TTCCC-----CC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H-----HHHHHhh----cCCcC-----CC-CccCCHHHH---HHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 2 1222111 11100 01 112233444 455599999999999999999999998764
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-37 Score=301.32 Aligned_cols=222 Identities=21% Similarity=0.386 Sum_probs=173.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc--------HHHHHHHHHHHhcCCCCCCc---------ccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG--------EKQFLLEMKQVGLLKHPNLE---------KPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~E~~~l~~l~H~ni~---------~~l 341 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+...... .+++.+|++++++++||||. .++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l 98 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM 98 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence 5688889999999999999995 57899999998643211 16789999999999999993 369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCC-----eEEEecc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFD-----ARIMDFG 414 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl~Dfg 414 (538)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++. +||+|||
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred EEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 999999999999987654 369999999999999999999999 78 999999999999988776 9999999
Q ss_pred CCcccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 415 FSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 415 ~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
+++..... ++.++||||||+++|||++|+.||...... -..+.......+ .
T Consensus 175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~-~ 247 (287)
T 4f0f_A 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------KIKFINMIREEG-L 247 (287)
T ss_dssp TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC------HHHHHHHHHHSC-C
T ss_pred ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc------HHHHHHHHhccC-C
Confidence 98743221 467899999999999999999999753321 111121111111 1
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
. +.+. ...++++.+ ++.+||+.||++|||+.|+++.|+++
T Consensus 248 ~----~~~~-~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 R----PTIP-EDCPPRLRN---VIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C----CCCC-TTSCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C----CCCC-cccCHHHHH---HHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1 1111 122334444 44599999999999999999999864
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=311.63 Aligned_cols=229 Identities=24% Similarity=0.380 Sum_probs=173.4
Q ss_pred CCCCCeEeecCCceEEEEEeC--CC--CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEEE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL--DG--SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLVY 343 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~--~~--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv~ 343 (538)
|...+.||+|+||.||+|... ++ ..||+|.++... ...+++.+|+.++++++|||| ..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 555678999999999999853 22 368999987533 334679999999999999999 236999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 171 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp ECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred ECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999998654 358999999999999999999999 9999999999999999999999999999974321
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++|||+| |..||...... .+...+. .+.. .
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-----~~~~~~~----~~~~--~ 315 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLL----QGRR--L 315 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-----CHHHHHH----TTCC--C
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-----HHHHHHH----cCCC--C
Confidence 16789999999999999999 67777653321 2222211 1110 0
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCccccc
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEE 532 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~ 532 (538)
......++.+ .+++.+||+.||++|||+.|+++.|+++...+........
T Consensus 316 ----~~p~~~~~~l---~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~~~ 365 (373)
T 3c1x_A 316 ----LQPEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 365 (373)
T ss_dssp ----CCCTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBCCC
T ss_pred ----CCCCCCCHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccceeec
Confidence 0112223344 4455599999999999999999999999988765554433
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-37 Score=308.36 Aligned_cols=237 Identities=22% Similarity=0.348 Sum_probs=178.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC--------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL--------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
.++|...+.||+|+||.||+|... ++..||+|+++... ...+++.+|+++++++ +||||
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 457888899999999999999852 46789999997543 2346789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
..++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence 34699999999999999986541 248999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
+.++.+||+|||+++..... ++.++||||||+++|||+| |+.||......
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 266 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 266 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----
Confidence 99999999999998754321 5778999999999999999 99999753221
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcccccCCCc
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEENSPF 536 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~p~ 536 (538)
.+...+ ..+... .. ....+.++. +++.+||+.||++|||+.|+++.|+++.....-.+..+.+.|+
T Consensus 267 -~~~~~~----~~~~~~-----~~-~~~~~~~l~---~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~~~~~~~~l 332 (334)
T 2pvf_A 267 -ELFKLL----KEGHRM-----DK-PANCTNELY---MMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQPL 332 (334)
T ss_dssp -HHHHHH----HHTCCC-----CC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-----------
T ss_pred -HHHHHH----hcCCCC-----CC-CccCCHHHH---HHHHHHccCChhhCcCHHHHHHHHHHHHhccccCcccCCCCcc
Confidence 111111 111100 01 111233444 4555999999999999999999999998877666655555554
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=310.77 Aligned_cols=230 Identities=24% Similarity=0.324 Sum_probs=180.3
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC---------
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL--------- 337 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni--------- 337 (538)
+....++|...+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++++++||||
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999963 34789999997543 234678999999999999999
Q ss_pred --cccEEEeecCCCCHHHHhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 040267 338 --EKPLVYKYMSNGTLYSLLHSNG----------------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQ 393 (538)
Q Consensus 338 --~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~ 393 (538)
..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 3469999999999999998642 1469999999999999999999999 999999
Q ss_pred CCCCCCeeeCCCCCeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCC
Q 040267 394 NISSSVILVDEDFDARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFE 447 (538)
Q Consensus 394 Dlkp~NIll~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~ 447 (538)
||||+||+++.++.+||+|||+++... ..++.++||||||+++|||+| |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999986421 116789999999999999999 999997
Q ss_pred CCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 448 INASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..... .... ....+.... . ....+.++. +++.+||+.||++|||+.||++.|+++.+.+.
T Consensus 279 ~~~~~--------~~~~-~~~~~~~~~-----~-~~~~~~~l~---~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 279 GMAHE--------EVIY-YVRDGNILA-----C-PENCPLELY---NLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TSCHH--------HHHH-HHHTTCCCC-----C-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCChH--------HHHH-HHhCCCcCC-----C-CCCCCHHHH---HHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 53321 1111 111221111 1 112233444 45559999999999999999999999887654
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=300.41 Aligned_cols=224 Identities=21% Similarity=0.344 Sum_probs=171.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv 342 (538)
.++|...+.||+|+||.||+|.... +..||+|.++... ...+.+.+|+.++++++|||| ..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv 93 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 93 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence 3467788999999999999998643 4579999987532 234678999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999998654 358999999999999999999999 9999999999999999999999999999875432
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||++ |+.||...... .+...+. .+...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~----~~~~~---- 236 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIE----NGERL---- 236 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH----TTCCC----
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHH----cCCCC----
Confidence 16778999999999999997 99999864322 2222211 11110
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.. ....+.++.. ++.+||+.||++|||+.|+++.|+++.++.
T Consensus 237 -~~-~~~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 -PM-PPNCPPTLYS---LMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp -CC-CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CC-CCCCCHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01 1122334444 455999999999999999999999987653
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-36 Score=297.27 Aligned_cols=229 Identities=21% Similarity=0.338 Sum_probs=176.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------ccEEEeecCCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------KPLVYKYMSNGT 350 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------~~lv~e~~~~gs 350 (538)
++|...+.||+|+||.||+|.. .++.||+|.+... ...+.+.+|++++++++||||+ .++||||+++|+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS 85 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence 4577788999999999999998 4788999999753 3356799999999999999993 369999999999
Q ss_pred HHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC-eEEEeccCCcccCC-------
Q 040267 351 LYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD-ARIMDFGFSRLTNG------- 421 (538)
Q Consensus 351 L~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~------- 421 (538)
|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++.....
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 9999987542 34789999999999999999999855578999999999999998886 79999999864322
Q ss_pred -------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHH
Q 040267 422 -------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488 (538)
Q Consensus 422 -------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 488 (538)
.++.++||||||+++|||+||+.||...... ......... .+... .... ..+..
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~-~~~~~-----~~~~-~~~~~ 232 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AFRIMWAVH-NGTRP-----PLIK-NLPKP 232 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS------HHHHHHHHH-TTCCC-----CCBT-TCCHH
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc------HHHHHHHHh-cCCCC-----Cccc-ccCHH
Confidence 2788999999999999999999999753221 111111111 11111 1111 12234
Q ss_pred HHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 489 ~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
+. +++.+||+.||++|||+.|+++.|+.+.+.+..
T Consensus 233 l~---~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 233 IE---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HH---HHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HH---HHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 44 455599999999999999999999999876643
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=302.19 Aligned_cols=238 Identities=21% Similarity=0.327 Sum_probs=175.0
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC--CCCCCc---------------
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL--KHPNLE--------------- 338 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~H~ni~--------------- 338 (538)
....++|...+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++... +||||+
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 344568999999999999999999984 8999999986533 34455566665554 899992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-----HPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
.++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 36999999999999999775 4999999999999999999999810 129999999999999999999999999
Q ss_pred cCCcccCCC---------------------------CCC------ccCcccHHHHHHHHHhC----------CCCCCCCc
Q 040267 414 GFSRLTNGD---------------------------ASL------QKDVHGFGVVLLELVTG----------QKPFEINA 450 (538)
Q Consensus 414 g~a~~~~~~---------------------------~~~------~~DV~S~Gvvl~elltg----------~~p~~~~~ 450 (538)
|+++..... .+. ++|||||||++|||+|| +.||....
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~ 266 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence 999643211 222 38999999999999999 56665432
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.... .... ................... .......+.+++.+||+.||++|||+.||++.|+++.++...
T Consensus 267 ~~~~---~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 335 (337)
T 3mdy_A 267 PSDP---SYED-MREIVCIKKLRPSFPNRWS---SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335 (337)
T ss_dssp CSSC---CHHH-HHHHHTTSCCCCCCCGGGG---GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTC
T ss_pred CCCC---chhh-hHHHHhhhccCccccccch---hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhccc
Confidence 2211 1111 1111111111111111111 123455566777799999999999999999999999987654
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=312.34 Aligned_cols=235 Identities=16% Similarity=0.193 Sum_probs=182.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC---------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcc-----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD---------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK----------- 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~----------- 339 (538)
++|...+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++++++||||+.
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 568888999999999999999653 789999998753 46889999999999988732
Q ss_pred ----------------cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 340 ----------------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 340 ----------------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
++||||+ +|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVD 193 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEc
Confidence 6999999 9999999987633469999999999999999999999 9999999999999999
Q ss_pred CCC--CeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 404 EDF--DARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 404 ~~~--~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
.++ .+||+|||+++.... .++.++||||||+++|||++|+.||.....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 998 899999999964321 167799999999999999999999985431
Q ss_pred cccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCccc
Q 040267 452 EEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFY 530 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 530 (538)
.. ..+......... ......+........+.++.++++ +||+.||++|||+.+|++.|+++.++.+.+.+.
T Consensus 274 ~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~ 344 (352)
T 2jii_A 274 NT---EDIMKQKQKFVD--KPGPFVGPCGHWIRPSETLQKYLK---VVMALTYEEKPPYAMLRNNLEALLQDLRVSPYD 344 (352)
T ss_dssp CH---HHHHHHHHHHHH--SCCCEECTTSCEECCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTS
T ss_pred CH---HHHHHHHHhccC--ChhhhhhhccccCCCcHHHHHHHH---HHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCc
Confidence 11 112222221111 112222222111123445555555 999999999999999999999999998876543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=297.57 Aligned_cols=230 Identities=19% Similarity=0.274 Sum_probs=179.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ...+++.+|+.++.+++|||| ..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4688889999999999999995 468999999985422 223678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999998765 59999999999999999999999 9999999999999999999999999999975432
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||+||+.||...... .......... .... ...
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~-~~~~-~~~ 235 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--------SIAIKHIQDS-VPNV-TTD 235 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--------HHHHHHHSSC-CCCH-HHH
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhhcc-CCCc-chh
Confidence 1678899999999999999999999853321 1111111111 1110 011
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHhHHhcCCCc
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKW-SMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~i~~~~~~~~ 528 (538)
... ..++.+. +++.+|++.||++|| +++++.+.|+++..+....+
T Consensus 236 ~~~-~~~~~l~---~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~ 281 (294)
T 4eqm_A 236 VRK-DIPQSLS---NVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE 281 (294)
T ss_dssp SCT-TSCHHHH---HHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred ccc-CCCHHHH---HHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence 111 1233444 455599999999998 99999999998776554443
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=297.81 Aligned_cols=217 Identities=23% Similarity=0.341 Sum_probs=165.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|.. .++.||||.++... ...+.+.+|+++++.++|||| ..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 4678889999999999999997 48899999986532 224678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---ccccCCCCCCeeeCC--------CCCeEEEe
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP---CLHQNISSSVILVDE--------DFDARIMD 412 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~---ivH~Dlkp~NIll~~--------~~~~kl~D 412 (538)
||+++|+|.+++... .+++..+..++.|++.||+|||+ .+ |+||||||+||+++. ++.+||+|
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp ECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999654 59999999999999999999999 66 999999999999986 67899999
Q ss_pred ccCCcccCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 413 FGFSRLTNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 413 fg~a~~~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
||+++..... ++.++||||||+++|||++|+.||....... ........ .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~-~ 230 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--------VAYGVAMN-K 230 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--------HHHHHHTS-C
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHhhhcC-C
Confidence 9999754321 6789999999999999999999998533211 11111111 1
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
.. ... ....++.+. +++.+||+.||++|||+.|+++.|+++
T Consensus 231 ~~----~~~-~~~~~~~~~---~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 LA----LPI-PSTCPEPFA---KLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CC----CCC-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CC----CCC-CcccCHHHH---HHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 10 001 112233444 455599999999999999999999864
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=300.16 Aligned_cols=238 Identities=19% Similarity=0.265 Sum_probs=180.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++|||| ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45778899999999999999964 58999999997533 345778899999999999999 225999
Q ss_pred eecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEeccCCcc
Q 040267 344 KYMSNGTLYSLLHSNGN-TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDFGFSRL 418 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~ 418 (538)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999986542 349999999999999999999999 999999999999999 7888899999999975
Q ss_pred cCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 419 TNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 419 ~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
... .++.++|||||||++|||+||+.||............+...... ..
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~p 244 (319)
T 4euu_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG-KP 244 (319)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH-CC
T ss_pred cCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC-CC
Confidence 321 25678999999999999999999997543322221112221111 11
Q ss_pred cCCccccc---------ccccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 469 SGRIKDVI---------DKALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 469 ~~~~~~~~---------d~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
...+..+. ...+. ..........+.+++.+||+.||++|||++|+++..++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11111100 00111 1223444455666777999999999999999999988654
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=303.69 Aligned_cols=226 Identities=21% Similarity=0.351 Sum_probs=178.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~ 338 (538)
.++|...+.||+|+||.||+|+. .+++.||+|.++... ...+.+.+|+++++++ +|||| .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35678889999999999999984 346799999997543 2346789999999999 89999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGN----------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
.++||||+++|+|.+++..... ..+++..+.+++.|++.||+|||+ .+|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence 4699999999999999987542 248999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 403 DEDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
+.++.+||+|||+++..... ++.++||||||+++|||+| |+.||.......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 255 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--- 255 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---
Confidence 99999999999998754321 6778999999999999999 999997543211
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.....+. .+. . .. .....+.++..+ +.+||+.||.+|||+.|+++.|+++.++.
T Consensus 256 -~~~~~~~----~~~-~----~~-~~~~~~~~l~~l---i~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 -KFYKMIK----EGF-R----ML-SPEHAPAEMYDI---MKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp -HHHHHHH----HTC-C----CC-CCTTSCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHhc----cCC-C----CC-CcccCCHHHHHH---HHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1111111 110 0 00 111223444444 45999999999999999999999988764
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-37 Score=299.70 Aligned_cols=222 Identities=22% Similarity=0.362 Sum_probs=174.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|.. +|+.||||.++... ..+.+.+|++++++++|||| ..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 35678889999999999999987 58899999997543 45779999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG----- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----- 421 (538)
++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999986543348899999999999999999999 9999999999999999999999999999875432
Q ss_pred ---------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ---------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ---------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||||+++|||+| |+.||...... .+...+ ..+. .... ....
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~----~~~~-----~~~~-~~~~ 239 (278)
T 1byg_A 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRV----EKGY-----KMDA-PDGC 239 (278)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHH----TTTC-----CCCC-CTTC
T ss_pred CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH----hcCC-----CCCC-cccC
Confidence 16789999999999999998 99999754321 111111 1110 0111 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+..+..++ .+||+.||++|||+.|+++.|+++...
T Consensus 240 ~~~l~~li---~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 240 PPAVYEVM---KNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHH---HHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 33444444 499999999999999999999998764
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=303.44 Aligned_cols=219 Identities=15% Similarity=0.237 Sum_probs=173.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+|... +++.||+|.++........+.+|+++++.++|||| ..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 457888899999999999999954 58899999998655556678999999999999999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC--CCCeEEEeccCCcccCCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE--DFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~-- 422 (538)
++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 84 ~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999997653 369999999999999999999999 99999999999999997 789999999999865331
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++|||||||++|||++|+.||...... ........ +... .+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~-~~~~--~~~~~~- 227 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMN-AEYT--FDEEAF- 227 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-TCCC--CCHHHH-
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHc-CCCC--CChhhh-
Confidence 578999999999999999999999753321 11111111 1100 000000
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.++.++++ +|++.||++|||+.|+++.
T Consensus 228 ~~~s~~~~~li~---~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 KEISIEAMDFVD---RLLVKERKSRMTASEALQH 258 (321)
T ss_dssp TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHHS
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhcC
Confidence 112334444444 9999999999999999973
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=296.56 Aligned_cols=232 Identities=15% Similarity=0.198 Sum_probs=178.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+++.||||.+.... ..+.+.+|++++.++ +|+|+ ..++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 4688889999999999999994 578999999986432 234688999999999 78888 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC-----eEEEeccCCcccCC
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD-----ARIMDFGFSRLTNG 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~ 421 (538)
+++|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++....
T Consensus 89 -~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 89 -GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred -CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 999999998754 259999999999999999999999 99999999999999987766 99999999874321
Q ss_pred ------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 422 ------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 422 ------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.++.++||||||+++|||++|+.||........ ......+........
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGEKKQSTP 241 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHHHHHHSC
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHhhccCcc
Confidence 157889999999999999999999986432111 011111111100000
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
.. .+. ...++++. +++.+||+.||++|||+.+|++.|+++.++.+..+
T Consensus 242 ~~-----~~~-~~~~~~l~---~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~ 289 (298)
T 1csn_A 242 LR-----ELC-AGFPEEFY---KYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTE 289 (298)
T ss_dssp HH-----HHT-TTSCHHHH---HHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred HH-----HHH-hhCcHHHH---HHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCC
Confidence 00 000 11233444 45559999999999999999999999999887664
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=307.89 Aligned_cols=231 Identities=19% Similarity=0.231 Sum_probs=176.4
Q ss_pred CCCCCeEeecCCceEEEEEeC-----CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-------------ccE
Q 040267 282 FSAQNVLVSTWTGTTYKAMLL-----DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-------------KPL 341 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-------------~~l 341 (538)
|...+.||+|+||.||++.+. +++.||||+++... ...+.+.+|++++++++||||. .++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 367789999999999998642 57899999997643 2346689999999999999992 269
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++.... +++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 113 v~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999998754 8999999999999999999999 9999999999999999999999999999976532
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccccc----ccc--cHHHHHHHHhcc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEG----YKG--NLVNWIDQLSSS 469 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~----~~~--~~~~~~~~~~~~ 469 (538)
. ++.++||||||+++|||+||+.||........ ... .....+......
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 1 45688999999999999999999975321100 000 000011111111
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
+.. .. .....+.+ +.+++.+||+.||++|||+.|+++.|+++.+++...
T Consensus 267 ~~~-----~~-~~~~~~~~---l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 267 GER-----LP-RPDKCPAE---VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp TCC-----CC-CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccC-----CC-CCccccHH---HHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 110 00 01122334 445555999999999999999999999998877543
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=296.38 Aligned_cols=225 Identities=24% Similarity=0.400 Sum_probs=170.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|+..+ .||+|.++.... ..+.+.+|++++++++|||| ..++||||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~ 100 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW 100 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence 4568888999999999999998643 599999975432 23668999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 101 CEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred cCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999997654 369999999999999999999999 9999999999999999999999999999864321
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||++|+.||......+ .+... ...+.......
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~----~~~~~~~~~~~ 248 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEM----VGRGSLSPDLS 248 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----HHHHH----HHHTSCCCCTT
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----HHHHH----hcccccCcchh
Confidence 15668999999999999999999997533211 11111 11111111111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
. +. ...++++. +++.+||+.||++|||+.|+++.|+++.+
T Consensus 249 ~-~~-~~~~~~l~---~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 K-VR-SNCPKRMK---RLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp S-SC-TTSCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred h-cc-ccCCHHHH---HHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1 11 11233444 45559999999999999999999998864
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=295.03 Aligned_cols=226 Identities=24% Similarity=0.330 Sum_probs=174.4
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCC---EEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEEE
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGS---MLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLVY 343 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~---~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv~ 343 (538)
|...++||+|+||.||+|.. .++. .||+|.+.... ...+.+.+|++++++++|||| ..++|+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 44558899999999999984 3333 79999997533 234678999999999999999 236999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+.+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 103 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred ecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999998744 368999999999999999999999 9999999999999999999999999999974321
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||++|..|+...... ..+...+.. +...
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~----~~~~--- 247 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQ----GRRL--- 247 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHT----TCCC---
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhc----CCCC---
Confidence 1578899999999999999966555432211 122222211 1100
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
......++.+.+ ++.+||+.||.+|||+.|+++.|+++.+++....
T Consensus 248 ---~~~~~~~~~l~~---li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 248 ---PQPEYCPDSLYQ---VMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp ---CCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred ---CCCccchHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 011122334444 4459999999999999999999999998875543
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=314.73 Aligned_cols=224 Identities=21% Similarity=0.320 Sum_probs=174.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|... ++..||||+++... ....++.+|+.++++++|||| ..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 46788899999999999999943 36689999997532 334568899999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---CeEEEe
Q 040267 341 LVYKYMSNGTLYSLLHSNG-----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DARIMD 412 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D 412 (538)
+||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999998643 2458999999999999999999999 9999999999999999554 599999
Q ss_pred ccCCccc-------------------------CCCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHH
Q 040267 413 FGFSRLT-------------------------NGDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 413 fg~a~~~-------------------------~~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
||+++.. ...++.++|||||||++|||+| |+.||...... .+.. ..
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-----~~~~---~i 299 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLE---FV 299 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHH---HH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---HH
Confidence 9998632 0127889999999999999998 99999753321 1111 11
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
. .+.... . ....+.. +.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 300 ~-~~~~~~-----~-~~~~~~~---l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 300 T-SGGRMD-----P-PKNCPGP---VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp H-TTCCCC-----C-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred H-cCCCCC-----C-CccCCHH---HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 1 111000 0 1112334 445555999999999999999999999987653
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=304.76 Aligned_cols=221 Identities=23% Similarity=0.365 Sum_probs=172.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCC----EEEEEEcccc--cccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGS----MLAIKRLSAC--KLGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|.. .+++ .||+|.+... ....+++.+|+.++++++||||+ .++|
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v 94 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence 5688889999999999999995 3454 3578877542 34567899999999999999993 3589
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
+||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp ECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999998754 269999999999999999999999 9999999999999999999999999999975422
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||++ |+.||...... .+...+. .+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~----~~~~~~-- 239 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILE----KGERLP-- 239 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH----TTCCCC--
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHH----cCCCCC--
Confidence 16789999999999999999 99999864332 1222111 111000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.....+.++. +++.+||+.||.+|||+.|+++.|+++.+
T Consensus 240 ----~~~~~~~~l~---~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 240 ----QPPICTIDVY---MIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----CCTTBCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ----CCccCCHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0112233444 45559999999999999999999999874
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-36 Score=295.98 Aligned_cols=225 Identities=24% Similarity=0.363 Sum_probs=174.5
Q ss_pred CCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv 342 (538)
.|...+.||+|+||.||+|...+ ...||+|.+.... ...+++.+|+.++++++|||| ..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 46777899999999999999543 2368999987533 234678999999999999999 33699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 106 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999997644 368999999999999999999999 9999999999999999999999999999974421
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++||||||+++|||++ |..||...... ....... .+..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-----~~~~~~~----~~~~-- 250 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLL----QGRR-- 250 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-----THHHHHH----TTCC--
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHHHh----cCCC--
Confidence 16788999999999999999 55566543221 1211111 1110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
.......++.+. +++.+||+.||++|||+.|+++.|+++..++...
T Consensus 251 ----~~~~~~~~~~l~---~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 251 ----LLQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp ----CCCCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred ----CCCCccCCHHHH---HHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 011122233444 4555999999999999999999999998876543
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=307.88 Aligned_cols=221 Identities=21% Similarity=0.320 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCE----EEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSM----LAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~----vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv 342 (538)
++|...+.||+|+||.||+|... +++. ||+|.+.... ...+++.+|+.++++++||||+ .++|
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v 92 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV 92 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence 46777899999999999999953 4543 8888875432 2335678899999999999993 3599
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999998653 268999999999999999999999 9999999999999999999999999999985432
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.++.++||||||+++|||+| |+.||...... .+...+. .+....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~----~~~~~~-- 237 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-----EVPDLLE----KGERLA-- 237 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-----HHHHHHH----TTCBCC--
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-----HHHHHHH----cCCCCC--
Confidence 16779999999999999999 99999864321 1222211 111000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
. ....+.+ +.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 238 ~----~~~~~~~---~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 238 Q----PQICTID---VYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp C----CTTBCTT---TTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred C----CCcCcHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 0111223 3445559999999999999999999999864
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=295.41 Aligned_cols=235 Identities=17% Similarity=0.212 Sum_probs=177.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEe
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYK 344 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e 344 (538)
..++|...+.||+|+||.||+|.. .+++.||||.+..... .+++.+|+++++.++|+++ ..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 456799999999999999999995 5789999998754322 2458899999999998876 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~ 421 (538)
|+ +|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred cc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99 899999998544 259999999999999999999999 999999999999999 7889999999999974321
Q ss_pred ------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 422 ------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 422 ------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.++.++|||||||++|||++|+.||......... ..+.......... .
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~-~ 238 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST-P 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS-C
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccccc-h
Confidence 1567899999999999999999999864332211 1111111111100 0
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
. +.+. ...++++. +++.+||+.||++|||+.+|++.|+++.++.+.+.+
T Consensus 239 ~-----~~~~-~~~~~~l~---~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 4hgt_A 239 I-----EVLC-KGYPSEFA---TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp H-----HHHT-TTSCHHHH---HHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTT
T ss_pred h-----hhhh-ccCCHHHH---HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcc
Confidence 0 0000 11233444 455599999999999999999999999998887653
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=303.53 Aligned_cols=224 Identities=23% Similarity=0.347 Sum_probs=172.3
Q ss_pred CCCCCCeEeecCCceEEEEEeCC-----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLD-----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
+|...+.||+|+||.||+|.... +..||||.++... .....+.+|++++++++|||| ..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45667899999999999998532 2369999997543 234568999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 125 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999998653 369999999999999999999999 9999999999999999999999999999875421
Q ss_pred -------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 -------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 -------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++|||++ |+.||...... .+ .... ..+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~---~~~~-~~~~~~-- 269 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EV---MKAI-NDGFRL-- 269 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HH---HHHH-HTTCCC--
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HH---HHHH-HCCCcC--
Confidence 16778999999999999999 99999753221 11 1111 111100
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
.. ....+..+ .+++.+||+.||++||++.|+++.|+++.+....
T Consensus 270 ---~~-~~~~~~~l---~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 270 ---PT-PMDCPSAI---YQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp ---CC-CTTCBHHH---HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred ---CC-cccCCHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 00 11123344 4455599999999999999999999998775543
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=304.32 Aligned_cols=232 Identities=13% Similarity=0.164 Sum_probs=179.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|.. .+++.||||.+.... ..+++.+|+++++++ +|||| ..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 5688889999999999999994 578999999986533 234688999999999 89999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC-----eEEEeccCCcccCC
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD-----ARIMDFGFSRLTNG 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~ 421 (538)
+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++....
T Consensus 88 -~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 88 -GPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred -CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 899999998753 369999999999999999999999 99999999999999998877 99999999975321
Q ss_pred ------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 422 ------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 422 ------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.++.++|||||||++|||++|+.||...... .+.......... .
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~-~ 236 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD-----TLKERYQKIGDT-K 236 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS-----SHHHHHHHHHHH-H
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc-----cHHHHHHHHHhh-h
Confidence 1577899999999999999999999864321 111111111100 0
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
... ....+ ....+ + +.+++..||+.||.+||++.+|.+.|+++.++.+...+
T Consensus 237 ~~~-~~~~~-~~~~p-~---~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 288 (330)
T 2izr_A 237 RAT-PIEVL-CENFP-E---MATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFD 288 (330)
T ss_dssp HHS-CHHHH-TTTCH-H---HHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred ccC-CHHHH-hccCh-H---HHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 000 00001 11122 4 44455599999999999999999999999988876543
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=326.97 Aligned_cols=220 Identities=18% Similarity=0.261 Sum_probs=176.4
Q ss_pred eEeecCCceEEEEEeC---CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEEEeecCCCCH
Q 040267 287 VLVSTWTGTTYKAMLL---DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMSNGTL 351 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~~gsL 351 (538)
.||+|+||.||+|... ++..||||.++... ...+++.+|++++++++||||+ .++||||+++|+|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L 422 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 422 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence 7999999999999853 45689999997532 3467899999999999999993 3599999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------- 421 (538)
.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 423 ~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 423 HKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99997653 369999999999999999999999 9999999999999999999999999999986421
Q ss_pred ----------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCC
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKG 484 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 484 (538)
.++.++|||||||++|||+| |+.||...... .+... +..+.... . ...
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~----i~~~~~~~-----~-p~~ 563 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAF----IEQGKRME-----C-PPE 563 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-----HHHHH----HHTTCCCC-----C-CTT
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHH----HHcCCCCC-----C-CCc
Confidence 16789999999999999998 99999864321 12221 11111110 0 111
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 485 YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 485 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
.+.+ +.+++.+||+.||++|||+.+|++.|+.+..+.....
T Consensus 564 ~~~~---l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~ 604 (613)
T 2ozo_A 564 CPPE---LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 604 (613)
T ss_dssp CCHH---HHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSC
T ss_pred CCHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcccc
Confidence 2334 4455559999999999999999999999988775543
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=306.88 Aligned_cols=227 Identities=22% Similarity=0.313 Sum_probs=175.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
..++|...+.||+|+||.||+|.. .++..||+|.++... ...+.+.+|+.++.++ +||||
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456788899999999999999995 235689999997532 3346799999999999 89999
Q ss_pred cccEEEeecCCCCHHHHhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGN---------------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 396 (538)
..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 34699999999999999986542 238999999999999999999999 999999999
Q ss_pred CCCeeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCc
Q 040267 397 SSVILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINA 450 (538)
Q Consensus 397 p~NIll~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~ 450 (538)
|+||+++.++.+||+|||++..... .++.++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999974321 16789999999999999998 999997643
Q ss_pred ccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 451 SEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
... .+... ...+.. ... ....++++.. ++.+||+.||++|||+.|+++.|+.+....
T Consensus 280 ~~~----~~~~~----~~~~~~-----~~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 VDA----NFYKL----IQNGFK-----MDQ-PFYATEEIYI---IMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CSH----HHHHH----HHTTCC-----CCC-CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cHH----HHHHH----HhcCCC-----CCC-CCCCCHHHHH---HHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 211 11111 111110 000 1122344444 445999999999999999999999886654
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=298.96 Aligned_cols=230 Identities=20% Similarity=0.328 Sum_probs=174.2
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc--------
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
++....++|...+.||+|+||.||+|... ++..||+|.++.... ..+.+.+|+.++++++||||.
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 33344567888899999999999999843 245899999975432 235688999999999999992
Q ss_pred --------ccEEEeecCCCCHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC
Q 040267 339 --------KPLVYKYMSNGTLYSLLHSN----GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF 406 (538)
Q Consensus 339 --------~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 406 (538)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCC
Confidence 27899999999999999542 23469999999999999999999999 9999999999999999999
Q ss_pred CeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHH
Q 040267 407 DARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLV 460 (538)
Q Consensus 407 ~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 460 (538)
.+||+|||+++.... .++.++||||||+++|||++ |+.||...... .+.
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~ 259 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMY 259 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHH
Confidence 999999999975421 16778999999999999999 88999754322 121
Q ss_pred HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 461 NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+ . .+... ... ...+++ +.+++.+||+.||++|||+.++++.|+++.++.
T Consensus 260 ~~~---~-~~~~~-----~~~-~~~~~~---l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 260 DYL---L-HGHRL-----KQP-EDCLDE---LYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HHH---H-TTCCC-----CCB-TTCCHH---HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHH---H-cCCCC-----CCC-ccccHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 1 11100 011 112234 445555999999999999999999999998765
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=294.94 Aligned_cols=224 Identities=20% Similarity=0.293 Sum_probs=169.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||+||+|+..+|+.||+|+++.... ..+.+.+|++++++++|||| ..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 356888899999999999999988899999999975332 23678899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 9985 8888887654 359999999999999999999999 9999999999999999999999999999975431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC---Ccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG---RIKDVID 477 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 477 (538)
.++.++|||||||++|||++|+.||......+ ....+....... .+....+
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-----QLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-----HHHHHHHHHCCCCTTTSGGGTT
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHHHCCCChHHhhhhhc
Confidence 16788999999999999999999998644322 111111111110 0000000
Q ss_pred ---------ccccC-------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 478 ---------KALTG-------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 478 ---------~~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..... ...+.+ +.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQE---GIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHH---HHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cchhhhcccccccCCcHHHhCcccCHH---HHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000 011233 445555999999999999999986
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=295.97 Aligned_cols=223 Identities=18% Similarity=0.317 Sum_probs=175.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv 342 (538)
.++|...+.||+|+||.||+|...+ +..||+|.++... ...+++.+|++++++++|||| ..++|
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v 90 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence 4568888999999999999998532 3369999997542 235679999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 91 MELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999997644 358999999999999999999999 9999999999999999999999999999875432
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++||||||+++|||+| |+.||...... .....+.. +....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~----~~~~~--- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEK----GDRLP--- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHH----TCCCC---
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhc----CCCCC---
Confidence 16778999999999999998 99999753322 12221111 11000
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.....++.+.. ++.+||+.||++|||+.|+++.|+++.+.
T Consensus 235 ---~~~~~~~~l~~---li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 ---KPDLCPPVLYT---LMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp ---CCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHH---HHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 01112334444 45599999999999999999999998653
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=298.55 Aligned_cols=236 Identities=19% Similarity=0.311 Sum_probs=181.8
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhc--CCCCCC---------------
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGL--LKHPNL--------------- 337 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~H~ni--------------- 337 (538)
-....++|...+.||+|+||.||+|+. +++.||||.+... ....+.+|++++.. ++||||
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 344556899999999999999999998 6899999999653 34667888888887 789999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCccccCCCCCCeeeCCCCCeE
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH--------HCCHPPCLHQNISSSVILVDEDFDAR 409 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~~k 409 (538)
..++||||+++|+|.+++... .+++.+++.++.|++.||+||| + .+|+||||||+||+++.++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEE
Confidence 236999999999999999875 4999999999999999999999 6 8999999999999999999999
Q ss_pred EEeccCCcccCCC---------------------------------CCCccCcccHHHHHHHHHhC----------CCCC
Q 040267 410 IMDFGFSRLTNGD---------------------------------ASLQKDVHGFGVVLLELVTG----------QKPF 446 (538)
Q Consensus 410 l~Dfg~a~~~~~~---------------------------------~~~~~DV~S~Gvvl~elltg----------~~p~ 446 (538)
|+|||+++..... ++.++||||||+++|||+|| +.||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 9999998643211 11579999999999999999 7788
Q ss_pred CCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 447 EINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
......+. ....+..... .......+.... ...+....+.+++.+||+.||++|||+.||++.|+++.++.+.
T Consensus 268 ~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~~ 340 (342)
T 1b6c_B 268 YDLVPSDP---SVEEMRKVVC-EQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340 (342)
T ss_dssp TTTSCSSC---CHHHHHHHHT-TSCCCCCCCGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC-
T ss_pred cccCcCcc---cHHHHHHHHH-HHHhCCCCcccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhcC
Confidence 65332211 2222222221 111111111111 1123455666777799999999999999999999999987664
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=292.25 Aligned_cols=234 Identities=18% Similarity=0.212 Sum_probs=180.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|+. .+++.||||.+..... .+++.+|+.+++.++|+++ ..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 45788889999999999999995 6799999999865332 3568899999999998876 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~- 421 (538)
+ +++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+|||+++....
T Consensus 87 ~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred c-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 9 899999998543 269999999999999999999999 9999999999999994 889999999999874321
Q ss_pred -----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 422 -----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 422 -----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.++.++||||||+++|||++|+.||......... ..+.......... ..
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~-~~ 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST-PI 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS-CH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-hhhhhhcccccCC-ch
Confidence 1567899999999999999999999864332111 1111111111110 00
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
+.+. ...++++. +++.+||+.||++|||+.+|++.|+++.++.+.+.+
T Consensus 240 -----~~~~-~~~~~~l~---~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 3uzp_A 240 -----EVLC-KGYPSEFA---TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp -----HHHT-TTSCHHHH---HHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSS
T ss_pred -----HHHH-hhCCHHHH---HHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccc
Confidence 0010 11233444 455599999999999999999999999998877643
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=300.59 Aligned_cols=217 Identities=17% Similarity=0.265 Sum_probs=171.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc-------cHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL-------GEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.+.|...+.||+|+||.||+|... +|+.||+|.++.... ..+.+.+|+.++++++|||| ..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456888899999999999999954 689999999965321 34779999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGF 415 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~ 415 (538)
++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+||++++++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 69999999999999997655 69999999999999999999999 9999999999999998776 799999999
Q ss_pred CcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 416 SRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 416 a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
++.... .++.++|||||||++|||++|+.||......+ ...... .+...
T Consensus 166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--------~~~~i~-~~~~~ 236 (361)
T 2yab_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANIT-AVSYD 236 (361)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHH-TTCCC
T ss_pred ceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHH-hcCCC
Confidence 975432 17789999999999999999999997643211 111111 11100
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.++... ...++++.++++ +||+.||++|||+.|+++
T Consensus 237 --~~~~~~-~~~s~~~~~li~---~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 --FDEEFF-SQTSELAKDFIR---KLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --CCHHHH-TTSCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred --CCchhc-cCCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 011100 112344555555 999999999999999985
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=293.41 Aligned_cols=227 Identities=18% Similarity=0.216 Sum_probs=170.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CC-------CEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DG-------SMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~-------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
++|...+.||+|+||.||+|... ++ ..||+|.+.... ...+.+.+|++++++++|||| ..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 46778899999999999999853 33 479999997543 445779999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--------eEEE
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--------ARIM 411 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~ 411 (538)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeec
Confidence 69999999999999998754 248999999999999999999999 99999999999999998877 9999
Q ss_pred eccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 412 DFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 412 Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
|||++..... .++.++||||||+++|||++|..|+...... ............
T Consensus 164 Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~~~~~~~~~~~~ 236 (289)
T 4fvq_A 164 DPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------QRKLQFYEDRHQ 236 (289)
T ss_dssp CCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHTTCC
T ss_pred cCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-------HHHHHHhhccCC
Confidence 9999975432 2788999999999999999965544322111 111111111111
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
.. ...+.++. +++.+||+.||++|||+.|+++.|+++....+.+..
T Consensus 237 ~~---------~~~~~~l~---~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~ 282 (289)
T 4fvq_A 237 LP---------APKAAELA---NLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282 (289)
T ss_dssp CC---------CCSSCTTH---HHHHHHSCSSGGGSCCHHHHHHHHHTCC--------
T ss_pred CC---------CCCCHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCC
Confidence 11 11122334 455599999999999999999999998876655543
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=297.27 Aligned_cols=225 Identities=19% Similarity=0.274 Sum_probs=177.1
Q ss_pred CCCCCC-eEeecCCceEEEEEeC---CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------ccEEEe
Q 040267 281 NFSAQN-VLVSTWTGTTYKAMLL---DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------KPLVYK 344 (538)
Q Consensus 281 ~f~~~~-~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e 344 (538)
+|...+ .||+|+||.||+|... ++..||+|.++... ...+++.+|++++++++||||. .++|||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 89 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME 89 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEE
Confidence 344444 8999999999999853 57789999997643 3356789999999999999993 469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 90 MAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp CCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred eCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999997543 369999999999999999999999 99999999999999999999999999998754311
Q ss_pred ------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
++.++||||||+++|||+| |+.||...... .+...+ ..+...
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~i----~~~~~~---- 232 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFI----EQGKRM---- 232 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHHHH----HTTCCC----
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHH----hcCCcC----
Confidence 5678999999999999999 99999753321 111111 111111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
.. ....+.++.. ++.+||+.||++|||+.|+++.|+++..+.+..
T Consensus 233 -~~-~~~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 233 -EC-PPECPPELYA---LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp -CC-CTTCCHHHHH---HHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred -CC-CCCcCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 11 1122334444 445999999999999999999999998776444
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=297.63 Aligned_cols=213 Identities=21% Similarity=0.275 Sum_probs=172.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.+++. ....+.+.+|+++++.++|||| ..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888899999999999999954 6999999999753 2345678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999998755 58999999999999999999999 9999999999999999999999999999875321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||...... ........ +.. .+
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~-~~~------~~ 224 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILM-EEI------RF 224 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC------CC
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--------HHHHHHHc-CCC------CC
Confidence 1688999999999999999999999753321 11111111 111 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
....+.++..+++ +||+.||++|| ++.||++.
T Consensus 225 -p~~~s~~~~~li~---~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 -PRTLSPEAKSLLA---GLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -CTTSCHHHHHHHH---HHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -CCCCCHHHHHHHH---HHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1123445566665 99999999999 89998763
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=304.17 Aligned_cols=216 Identities=19% Similarity=0.282 Sum_probs=168.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
++|...+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+.+++.++||||+ .++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57888899999999999999954 78999999986433 2235688999999999999993 3699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 87 CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999998665 59999999999999999999999 9999999999999999999999999999974320
Q ss_pred ---------------------C-CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ---------------------D-ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ---------------------~-~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .+.++|||||||++|||++|+.||....... .....|.. .... ..+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~----~~~~---~~~- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKE----KKTY---LNP- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHHT----TCTT---STT-
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHhc----cccc---CCc-
Confidence 0 3668999999999999999999997543211 11111111 1000 000
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++.+ ++.+||+.||++|||+.|+++.
T Consensus 231 --~~~~~~~~~~---li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 --WKKIDSAPLA---LLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --GGGSCHHHHH---HHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccCCHHHHH---HHHHHccCChhhCcCHHHHhhC
Confidence 0112234444 5559999999999999999764
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=301.17 Aligned_cols=235 Identities=20% Similarity=0.273 Sum_probs=183.0
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEcccccc--cHHHHHHHHHHHhcC-CCCCC----
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACKL--GEKQFLLEMKQVGLL-KHPNL---- 337 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~ni---- 337 (538)
...+.....++|...+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++.++ +||||
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344445567899999999999999999983 3467999999975432 345789999999999 79999
Q ss_pred --------cccEEEeecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCC
Q 040267 338 --------EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395 (538)
Q Consensus 338 --------~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl 395 (538)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccC
Confidence 25699999999999999987542 128899999999999999999999 99999999
Q ss_pred CCCCeeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCC
Q 040267 396 SSSVILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEIN 449 (538)
Q Consensus 396 kp~NIll~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~ 449 (538)
||+||+++.++.+||+|||+++.... .++.++||||||+++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999975422 16789999999999999998 99999753
Q ss_pred cccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 450 ASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
...+ .+... ...+... .. ....+.++ .+++.+||+.||.+|||+.||++.|+++.+...
T Consensus 255 ~~~~----~~~~~----~~~~~~~-----~~-~~~~~~~l---~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 255 KIDE----EFCRR----LKEGTRM-----RA-PDYTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCSH----HHHHH----HHHTCCC-----CC-CTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred chhH----HHHHH----hccCccC-----CC-CCCCCHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 3211 11111 1111100 01 11123344 445559999999999999999999999987654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=290.85 Aligned_cols=223 Identities=21% Similarity=0.314 Sum_probs=169.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++|||| ..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4678889999999999999998789999999996533 224678899999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 985 9999987653 258999999999999999999999 999999999999999999999999999886422
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---CCccc----
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS---GRIKD---- 474 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---- 474 (538)
..++.++|||||||++|||++|+.||......+ .+.... ..... ..+..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD----QLMRIF-RILGTPNSKNWPNVTEL 231 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHH-HHHCCCCTTTSTTGGGS
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHH-HHHCCCChhhchhhhcc
Confidence 116889999999999999999999998643211 111111 11110 00000
Q ss_pred -ccccccc----------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 -VIDKALT----------GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 -~~d~~l~----------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++... ....++++.+++ .+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li---~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLL---SKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCCHHHHHHH---HHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccCccHHHHhhhcCHHHHHHH---HHHcCCCcccCCCHHHHhc
Confidence 0011000 011234444444 4999999999999999875
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=299.37 Aligned_cols=223 Identities=21% Similarity=0.272 Sum_probs=174.9
Q ss_pred hcCCCCCC-eEeecCCceEEEEEe---CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------cccE
Q 040267 279 TSNFSAQN-VLVSTWTGTTYKAML---LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~-~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------~~~l 341 (538)
.++|...+ .||+|+||.||+|.. .+++.||||.++... ...+++.+|+++++.++|||| ..++
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l 94 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML 94 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence 34566666 899999999999963 346789999997543 224679999999999999999 3369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 95 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999998765 59999999999999999999999 9999999999999999999999999999875432
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
. ++.++||||||+++|||+| |+.||...... .+.. ....+...
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~----~~~~~~~~- 239 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTA----MLEKGERM- 239 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH----HHHTTCCC-
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHH----HHHcCCCC-
Confidence 1 4568999999999999999 99999853321 1111 11111111
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.. ....+..+.. ++.+||+.||++|||+.||++.|+++....
T Consensus 240 ----~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 240 ----GC-PAGCPREMYD---LMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp ----CC-CTTCCHHHHH---HHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ----CC-CCCCCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11 1122334444 455999999999999999999999987654
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=300.25 Aligned_cols=211 Identities=18% Similarity=0.281 Sum_probs=169.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
++|...+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+++++.++||||+ .++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788889999999999999995 578999999986422 2346789999999999999993 36999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+ +|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred ECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 999 689999987655 59999999999999999999999 99999999999999999999999999999754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc-
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA- 479 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~- 479 (538)
.+.++|||||||++|||++|+.||......+.. ..+....
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----------------~~i~~~~~ 225 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----------------KKVNSCVY 225 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----------------CCCCSSCC
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----------------HHHHcCCC
Confidence 267899999999999999999999864322111 0000000
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
......+.++.++++ +||+.||.+|||+.|+++.
T Consensus 226 ~~p~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 VMPDFLSPGAQSLIR---RMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCTTSCHHHHHHHH---TTSCSSGGGSCCHHHHTTC
T ss_pred CCcccCCHHHHHHHH---HHcCCChhHCcCHHHHHhC
Confidence 011223445555555 9999999999999999863
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-36 Score=300.13 Aligned_cols=232 Identities=22% Similarity=0.308 Sum_probs=177.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++||||. .+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577789999999999999984 358899999997543 3346799999999999999992 36
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 121 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999998754 359999999999999999999999 999999999999999999999999999997543
Q ss_pred CC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccc-------cccccHHHHHHHHh
Q 040267 421 GD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEE-------GYKGNLVNWIDQLS 467 (538)
Q Consensus 421 ~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 467 (538)
.. ++.++||||||+++|||+||..|+....... .........+....
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 21 4668999999999999999999986421100 00000111111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
..+... .. ....+.++ .+++.+||+.||++|||+.||++.|+++.+++
T Consensus 277 ~~~~~~-----~~-~~~~~~~l---~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 277 KNNGRL-----PR-PDGCPDEI---YMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HTTCCC-----CC-CTTCCHHH---HHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hcCCCC-----CC-CCcccHHH---HHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111100 00 11223344 44555999999999999999999999998764
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=304.18 Aligned_cols=217 Identities=17% Similarity=0.252 Sum_probs=166.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc----cHHHHHHHHHHHhcC-CCCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL----GEKQFLLEMKQVGLL-KHPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~H~ni-----------~~~l 341 (538)
.++|...++||+|+||.||+|+.. +++.||+|++++... ..+.+.+|..++.++ +|||| ..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457888999999999999999964 588999999975432 224578899999887 89999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999998765 59999999999999999999999 9999999999999999999999999999975211
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||......+........++.........
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 167899999999999999999999975433222111112222222221111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
.+ ....+.++.++++ +||+.||++||++
T Consensus 280 ~~-p~~~s~~~~~li~---~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 RI-PRSLSVKAASVLK---SFLNKDPKERLGC 307 (396)
T ss_dssp CC-CTTSCHHHHHHHH---HHTCSCTTTSTTC
T ss_pred CC-CCcCCHHHHHHHH---HHhcCCHhHcCCC
Confidence 01 1123345555555 9999999999996
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=296.39 Aligned_cols=216 Identities=17% Similarity=0.274 Sum_probs=170.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-------ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-------LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
+.|...+.||+|+||.||+|... +|+.||+|.++... ...+.+.+|+.++++++|||| ..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45788899999999999999964 68999999986432 135779999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFS 416 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a 416 (538)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 91 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999997654 69999999999999999999999 9999999999999999887 8999999999
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+.... .++.++|||||||++|||++|+.||......+ ....... ... .
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~~~~-~~~-~ 235 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANVSA-VNY-E 235 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHH-TCC-C
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHh-cCC-C
Confidence 76431 16789999999999999999999997533211 1111111 000 0
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ..... ...+.++.++++ +||+.||++|||+.|+++
T Consensus 236 ~-~~~~~-~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 F-EDEYF-SNTSALAKDFIR---RLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C-CHHHH-TTSCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred c-Ccccc-ccCCHHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 0 00000 112334444444 999999999999999987
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-36 Score=295.97 Aligned_cols=228 Identities=19% Similarity=0.269 Sum_probs=172.0
Q ss_pred CCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
.|...+.||+|+||.||+|++ .+++.||+|.++... ...+.+.+|++++++++||||. .+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 467778999999999999983 358899999997532 3457799999999999999992 36
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 102 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999996543 259999999999999999999999 999999999999999999999999999997543
Q ss_pred CC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccc------cccccHHHHHHHHhc
Q 040267 421 GD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEE------GYKGNLVNWIDQLSS 468 (538)
Q Consensus 421 ~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~------~~~~~~~~~~~~~~~ 468 (538)
.. ++.++||||||+++|||+||+.|+....... .........+.....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 21 4568999999999999999999875321100 000001111111111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
.+... .. ....++++. +++.+||+.||++|||+.|+++.|+++.
T Consensus 258 ~~~~~-----~~-~~~~~~~l~---~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGKRL-----PC-PPNCPDEVY---QLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTCCC-----CC-CTTCCHHHH---HHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCC-----CC-CCCCCHHHH---HHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11100 00 112233444 4555999999999999999999999875
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=301.73 Aligned_cols=214 Identities=18% Similarity=0.270 Sum_probs=170.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------ccc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EKP 340 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~~ 340 (538)
..++|...+.||+|+||.||+|+.. +++.||||++++. ....+.+.+|.+++..+ +|||| ..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468999999999999999999954 6899999999753 23346688999999988 69999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 101 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999998765 59999999999999999999999 999999999999999999999999999998532
Q ss_pred CC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 GD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.. ++.++|||||||++|||++|+.||...... +....... +..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~-~~~----- 241 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILN-DEV----- 241 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC-----
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHc-CCC-----
Confidence 11 788999999999999999999999864322 11111111 111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSM------YQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~ 515 (538)
.. ....+..+..+++ +|++.||++||++ .|+++
T Consensus 242 -~~-p~~~~~~~~~li~---~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 -VY-PTWLHEDATGILK---SFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -CC-CTTSCHHHHHHHH---HHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -CC-CCCCCHHHHHHHH---HHhhhCHHHccCCcccCCHHHHhh
Confidence 00 1123345555555 9999999999998 67765
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=303.58 Aligned_cols=220 Identities=19% Similarity=0.246 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||.||+++.. +++.||||.+.......+.+.+|+.++++++|||| ..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 457888899999999999999964 78999999998766556789999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--eEEEeccCCcccCC---
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--ARIMDFGFSRLTNG--- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~--- 421 (538)
++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++....
T Consensus 99 ~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 99 SGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999997655 59999999999999999999999 99999999999999987765 99999999873221
Q ss_pred -------------------CC-CCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 -------------------DA-SLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 -------------------~~-~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.+ +.++|||||||++|||++|+.||....... .....+....... .. .. .
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~~~~~~~~~~-~~--~~---~ 243 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR----DYRKTIQRILSVK-YS--IP---D 243 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC----CHHHHHHHHHTTC-CC--CC---T
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH----HHHHHHHHHhcCC-CC--CC---C
Confidence 13 334899999999999999999998643322 2222222221111 00 00 0
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++..+++ +||+.||++|||+.|+++.
T Consensus 244 ~~~~s~~~~~li~---~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 DIRISPECCHLIS---RIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TSCCCHHHHHHHH---HHSCSCTTTSCCHHHHHTS
T ss_pred cCCCCHHHHHHHH---HHccCChhHCcCHHHHHhC
Confidence 1112345555555 9999999999999999874
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=326.33 Aligned_cols=215 Identities=21% Similarity=0.265 Sum_probs=172.4
Q ss_pred CeEeecCCceEEEEEe---CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------ccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAML---LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~~g 349 (538)
+.||+|+||.||+|.+ .+++.||||+++... ...+++.+|++++++++||||+ .++||||+++|
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 4799999999999964 246789999997533 2357899999999999999993 35999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-------- 421 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------- 421 (538)
+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 455 ~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 455 PLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999998765 69999999999999999999999 9999999999999999999999999999875422
Q ss_pred ------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++ |+.||...... .+ ...+..+.... . .
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~----~~~i~~~~~~~-----~-p 594 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EV----TAMLEKGERMG-----C-P 594 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HH----HHHHHTTCCCC-----C-C
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HH----HHHHHcCCCCC-----C-C
Confidence 16789999999999999998 99999853321 11 11122211110 1 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...++++ .+++.+||+.||++|||+.+|++.|+++..+
T Consensus 595 ~~~~~~l---~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 595 AGCPREM---YDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp TTCCHHH---HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHH---HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1223344 4455599999999999999999999988654
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=294.45 Aligned_cols=213 Identities=22% Similarity=0.308 Sum_probs=163.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------------------------cHHHHHHHHHHHhc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------------------------GEKQFLLEMKQVGL 331 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~E~~~l~~ 331 (538)
++|...+.||+|+||.||+|.. .+++.||||.+..... ..+++.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5788889999999999999995 4688999999864321 12458899999999
Q ss_pred CCCCCC-------------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCC
Q 040267 332 LKHPNL-------------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398 (538)
Q Consensus 332 l~H~ni-------------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~ 398 (538)
++|||| ..++||||+++|+|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 999999 236999999999998876443 59999999999999999999999 99999999999
Q ss_pred CeeeCCCCCeEEEeccCCcccCCC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCccc
Q 040267 399 VILVDEDFDARIMDFGFSRLTNGD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASE 452 (538)
Q Consensus 399 NIll~~~~~~kl~Dfg~a~~~~~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~ 452 (538)
||+++.++.+||+|||+++..... ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~- 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI- 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH-
T ss_pred HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH-
Confidence 999999999999999998754321 25678999999999999999999975321
Q ss_pred ccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 453 EGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+..... ..... . + .....++++..++. +||+.||++|||+.|+++
T Consensus 246 -------~~~~~~~~-~~~~~-~--~--~~~~~~~~l~~li~---~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 -------MCLHSKIK-SQALE-F--P--DQPDIAEDLKDLIT---RMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -------HHHHHHHH-HCCCC-C--C--SSSCCCHHHHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred -------HHHHHHHh-cccCC-C--C--CccccCHHHHHHHH---HHhhcChhhCCCHHHHhc
Confidence 11111111 11110 0 0 01122344555555 999999999999999875
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=291.72 Aligned_cols=232 Identities=18% Similarity=0.297 Sum_probs=173.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc-----------ccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE-----------KPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~-----------~~lv 342 (538)
.++|...+.||+|+||.||+|.. .+|+.||+|.++... ...+++.+|++++++++||||. .++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 34688889999999999999995 579999999997422 2346688999999999999993 3589
Q ss_pred EeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999752 23468999999999999999999999 999999999999999999999999999987432
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++||||||+++|||++|+.||..... .......... ......
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~~~--- 257 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIE-QCDYPP--- 257 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHHH-TTCSCC---
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHhh-cccCCC---
Confidence 2 167789999999999999999999975321 1222222211 111111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCc
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE 528 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 528 (538)
......++++..+++ +||+.||++|||+.+|++.|+++......+.
T Consensus 258 --~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 258 --LPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp --CCTTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred --CcccccCHHHHHHHH---HHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 111223345555555 9999999999999999999999988776553
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=306.10 Aligned_cols=240 Identities=19% Similarity=0.270 Sum_probs=180.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-------------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++|||| ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 45778899999999999999964 58999999997533 345778899999999999999 236999
Q ss_pred eecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEeccCCcc
Q 040267 344 KYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDFGFSRL 418 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~ 418 (538)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999998654 2349999999999999999999999 999999999999999 7788899999999975
Q ss_pred cCCC------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 419 TNGD------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 419 ~~~~------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
.... ++.++|||||||++|||++|+.||............+...... ..
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~-~p 244 (396)
T 4eut_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG-KP 244 (396)
T ss_dssp CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS-CC
T ss_pred ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC-CC
Confidence 4321 2457899999999999999999997543322111111111111 00
Q ss_pred cCCccccc---c------ccc--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 469 SGRIKDVI---D------KAL--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 469 ~~~~~~~~---d------~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
...+..+. + ..+ ...........+.+++.+||+.||++|||+.|+++.++++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111000 0 001 1122344455566677799999999999999999999998764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=304.26 Aligned_cols=232 Identities=22% Similarity=0.273 Sum_probs=174.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-----CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-------------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-----LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-------------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-------------~~ 340 (538)
++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||. .+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4677789999999999999984 357899999997643 3346689999999999999992 35
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++..... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 99999999999999986432 58999999999999999999999 999999999999999999999999999998543
Q ss_pred CC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccc------cccHHHHHHHHhc
Q 040267 421 GD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGY------KGNLVNWIDQLSS 468 (538)
Q Consensus 421 ~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~------~~~~~~~~~~~~~ 468 (538)
.. ++.++||||||+++|||++|+.||......... .......+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 21 467899999999999999999998743221000 0000011111111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.+.. .. .....++++. +++.+||+.||++|||+.|+++.|+.+....
T Consensus 259 ~~~~-----~~-~~~~~~~~l~---~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 259 EGQR-----LP-APPACPAEVH---ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TTCC-----CC-CCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cccC-----CC-CCCcccHHHH---HHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1110 00 0112233444 4555999999999999999999999986654
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=305.16 Aligned_cols=178 Identities=17% Similarity=0.264 Sum_probs=153.6
Q ss_pred ccCHHHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC-----CCCC-----
Q 040267 269 KLKLVHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-----HPNL----- 337 (538)
Q Consensus 269 ~~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----H~ni----- 337 (538)
.+++.+.....++|...+.||+|+||.||+|.. .+++.||||+++......+.+..|+.++++++ ||||
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 344444455677899999999999999999995 56899999999865555667888999999997 9999
Q ss_pred ------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-------
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE------- 404 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~------- 404 (538)
..++||||+ +++|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||++.
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEE
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccc
Confidence 345999999 8999999988765569999999999999999999999 99999999999999986
Q ss_pred ------------------CCCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCC
Q 040267 405 ------------------DFDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPF 446 (538)
Q Consensus 405 ------------------~~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~ 446 (538)
++.+||+|||+++.... .++.++|||||||++|||+||+.||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 78999999999975432 2788999999999999999999999
Q ss_pred CCCc
Q 040267 447 EINA 450 (538)
Q Consensus 447 ~~~~ 450 (538)
....
T Consensus 260 ~~~~ 263 (360)
T 3llt_A 260 RTHE 263 (360)
T ss_dssp CCSS
T ss_pred CCCc
Confidence 8643
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=299.83 Aligned_cols=214 Identities=18% Similarity=0.231 Sum_probs=167.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
.++|...+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|++++++++||||+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 346888899999999999999965 79999999997432 3457799999999999999993
Q ss_pred ---------------------------------------------------ccEEEeecCCCCHHHHhhcCCC-CCCCHH
Q 040267 339 ---------------------------------------------------KPLVYKYMSNGTLYSLLHSNGN-TALDWP 366 (538)
Q Consensus 339 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~-~~l~~~ 366 (538)
.++||||+++|+|.+++..... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 4799999999999999987642 346777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------------------------
Q 040267 367 SRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------------------------- 421 (538)
Q Consensus 367 ~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------------- 421 (538)
.+++++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 165 ~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 899999999999999999 9999999999999999999999999999875421
Q ss_pred ----------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHH
Q 040267 422 ----------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQ 491 (538)
Q Consensus 422 ----------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 491 (538)
.++.++||||||+++|||++|..|+... ...... ........ ........
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~-~~~~~~~~---------~~~~~~~~ 301 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITD-VRNLKFPL---------LFTQKYPQ 301 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHH-HHTTCCCH---------HHHHHCHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHH-hhccCCCc---------ccccCChh
Confidence 1688999999999999999987765320 001111 11111100 01122233
Q ss_pred HHHHHhHccCCCCCCCCCHHHHHH
Q 040267 492 FLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 492 l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+++.+||+.||++|||+.|+++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCCCHHHHhh
Confidence 455666999999999999999986
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=303.34 Aligned_cols=229 Identities=21% Similarity=0.302 Sum_probs=178.7
Q ss_pred HHHHHHhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------
Q 040267 273 VHLIAATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------- 337 (538)
Q Consensus 273 ~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------- 337 (538)
++.....++|...+.||+|+||.||+|... +++.||+|.+.... ....++.+|++++++++||||
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678889999999999999999853 36789999997543 234568899999999999999
Q ss_pred ----cccEEEeecCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC
Q 040267 338 ----EKPLVYKYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED 405 (538)
Q Consensus 338 ----~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 405 (538)
..++||||+++|+|.+++.... ...+++..+++++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCC
Confidence 3469999999999999997532 1357999999999999999999999 999999999999999999
Q ss_pred CCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccH
Q 040267 406 FDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNL 459 (538)
Q Consensus 406 ~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 459 (538)
+.+||+|||+++.... .++.++||||||+++|||+| |+.||......
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------- 247 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------- 247 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-------
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-------
Confidence 9999999999874321 16789999999999999999 89999753221
Q ss_pred HHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 460 VNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 460 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
...... ..+..... ....+..+.. ++.+||+.||++|||+.|+++.|+++.+
T Consensus 248 -~~~~~~-~~~~~~~~------~~~~~~~l~~---li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 248 -QVLRFV-MEGGLLDK------PDNCPDMLFE---LMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -HHHHHH-HTTCCCCC------CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -HHHHHH-HcCCcCCC------CCCCCHHHHH---HHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 111111 11111110 1122334444 4559999999999999999999988744
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=303.04 Aligned_cols=228 Identities=21% Similarity=0.336 Sum_probs=177.7
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeCC-C-----CEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLLD-G-----SMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL---------- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~~-~-----~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni---------- 337 (538)
...++|...+.||+|+||.||+|.... + ..||+|.++... ...+.+.+|+++++++ +||||
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 345678889999999999999999532 3 489999997543 2346789999999999 89999
Q ss_pred -cccEEEeecCCCCHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNG------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE 404 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 404 (538)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECC
Confidence 3469999999999999997532 2358999999999999999999999 99999999999999999
Q ss_pred CCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccccc
Q 040267 405 DFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGN 458 (538)
Q Consensus 405 ~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 458 (538)
++.+||+|||+++.... .++.++||||||+++|||+| |..||....... .
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~ 275 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----K 275 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH----H
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH----H
Confidence 99999999999974321 16788999999999999999 999997533211 1
Q ss_pred HHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 459 LVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
+...+.. +.. .. .....++.+. +++.+||+.||++|||+.||++.|+++.++.
T Consensus 276 ~~~~~~~----~~~-----~~-~~~~~~~~l~---~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 276 FYKLVKD----GYQ-----MA-QPAFAPKNIY---SIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHHHH----TCC-----CC-CCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhc----CCC-----CC-CCCCCCHHHH---HHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1111111 100 00 0111233444 4555999999999999999999999987653
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=303.72 Aligned_cols=240 Identities=18% Similarity=0.167 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC----CCCEEEEEEcccccc------------cHHHHHHHHHHHhcCCCCCCc-----
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL----DGSMLAIKRLSACKL------------GEKQFLLEMKQVGLLKHPNLE----- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~H~ni~----- 338 (538)
++|...+.||+|+||.||+|... ++..||+|.+..... ....+.+|+..+..++||||.
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999964 578999999865321 123467888999999999992
Q ss_pred ----------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC--
Q 040267 339 ----------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-- 406 (538)
Q Consensus 339 ----------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-- 406 (538)
.++||||+ +++|.+++...+ .+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCC
Confidence 36999999 999999998765 69999999999999999999999 9999999999999999877
Q ss_pred CeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccccccc
Q 040267 407 DARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK 456 (538)
Q Consensus 407 ~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~ 456 (538)
.+||+|||+++.... .++.++|||||||++|||+||+.||.......
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--- 267 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP--- 267 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH---
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc---
Confidence 999999999964310 16789999999999999999999996422111
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcccccC
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEEN 533 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~ 533 (538)
............ .+...+.........++++.++++ +||+.||++|||+.+|++.|+++....+..+.....
T Consensus 268 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~~~~~ 339 (345)
T 2v62_A 268 -VAVQTAKTNLLD-ELPQSVLKWAPSGSSCCEIAQFLV---CAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKG 339 (345)
T ss_dssp -HHHHHHHHHHHH-TTTHHHHHHSCTTSCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCCCCTT
T ss_pred -HHHHHHHHhhcc-cccHHHHhhccccccHHHHHHHHH---HHhhcCcccCCCHHHHHHHHhccCCcccCCCcccCC
Confidence 111111111110 111111111111123344555555 999999999999999999999876655554444433
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=299.07 Aligned_cols=225 Identities=28% Similarity=0.430 Sum_probs=175.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCE--EEEEEcccc--cccHHHHHHHHHHHhcC-CCCCCc-----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSM--LAIKRLSAC--KLGEKQFLLEMKQVGLL-KHPNLE-----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~--vavK~~~~~--~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv 342 (538)
++|...+.||+|+||.||+|.. .++.. ||+|.++.. ....+++.+|++++.++ +||||. .++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4688889999999999999995 35654 499998642 23345689999999999 899993 4699
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
|||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence 99999999999998653 2468999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCC----------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHH
Q 040267 409 RIMDFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 409 kl~Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
||+|||+++.... .++.++||||||+++|||+| |+.||..... ......
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~ 253 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEK 253 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHH
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------HHHHHH
Confidence 9999999863221 15789999999999999998 9999975332 111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
.. .+. .... ....+..+.. ++.+||+.||++|||+.|+++.|+++.++..
T Consensus 254 ~~-~~~-----~~~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 254 LP-QGY-----RLEK-PLNCDDEVYD---LMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp GG-GTC-----CCCC-CTTBCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred hh-cCC-----CCCC-CCCCCHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11 110 0001 1122334444 4559999999999999999999999987654
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-36 Score=298.10 Aligned_cols=225 Identities=18% Similarity=0.240 Sum_probs=172.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc---------------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE---------------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~---------------~~lv 342 (538)
++|...+.||+|+||.||++.. .+++.||||++.... ...+.+.+|++++++++||||. .++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4688889999999999999995 579999999986432 3456789999999999999992 2489
Q ss_pred EeecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||+++|+|.+++... ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 9999999999999762 23469999999999999999999999 999999999999999999999999999865421
Q ss_pred C-----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 421 G-----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 421 ~-----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
. .++.++||||||+++|||++|+.||...... ...+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~- 261 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQ- 261 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHH-
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhh-
Confidence 0 0477999999999999999999999632111 001111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. ... .. .....+.++.. ++.+||+.||.+|||+.|+++.|+.+...
T Consensus 262 ---~-~~~----~~-~~~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 262 ---N-QLS----IP-QSPRHSSALWQ---LLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp ---C-C------CC-CCTTSCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred ---c-cCC----CC-ccccCCHHHHH---HHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 0 000 00 01122334444 55599999999999999999999987643
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=302.55 Aligned_cols=170 Identities=18% Similarity=0.219 Sum_probs=147.2
Q ss_pred hcCCCCCCeEeec--CCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------ccE
Q 040267 279 TSNFSAQNVLVST--WTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-----------KPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G--~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-----------~~l 341 (538)
.++|...+.||+| +||.||+|+.. +++.||||+++.... ..+.+.+|++++++++||||+ .++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3467888999999 99999999965 699999999975432 235688899999999999993 369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc--
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT-- 419 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~-- 419 (538)
||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 9999999999999987654569999999999999999999999 99999999999999999999999999986421
Q ss_pred ----------------------------C--CCCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 420 ----------------------------N--GDASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 420 ----------------------------~--~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
. ..++.++|||||||++|||++|+.||.....
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 242 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 0 1267899999999999999999999986443
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=294.54 Aligned_cols=217 Identities=19% Similarity=0.274 Sum_probs=174.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc--------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-------------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-------------------- 338 (538)
.+|...+.||+|+||.||+|... +++.||+|.++... +.+.+|++++++++||||.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 46888899999999999999965 79999999997543 4577899999999999992
Q ss_pred -------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEEC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEEC
Confidence 3699999999999999986544479999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc
Q 040267 412 DFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS 469 (538)
Q Consensus 412 Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 469 (538)
|||++..... .++.++||||||+++|||++|..|+... ..+... ...
T Consensus 165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~~-~~~ 233 (284)
T 2a19_B 165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFTD-LRD 233 (284)
T ss_dssp CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHHH-HHT
T ss_pred cchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHHH-hhc
Confidence 9999875432 1678999999999999999999887521 111111 111
Q ss_pred CCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 470 GRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 470 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
+.+ . ...+..+..++ .+||+.||++|||+.|+++.|+.+.+...
T Consensus 234 ~~~--------~-~~~~~~~~~li---~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 234 GII--------S-DIFDKKEKTLL---QKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp TCC--------C-TTSCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccc--------c-ccCCHHHHHHH---HHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 111 1 12233444444 49999999999999999999998876543
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=304.24 Aligned_cols=218 Identities=17% Similarity=0.249 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+|+.||+|.+.... ...+.+.+|++++++++|||| ..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45788889999999999999984 578999999997543 234568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++ +++.+||+|||+++...
T Consensus 90 E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 90 DLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp CCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999998765 69999999999999999999999 9999999999999998 46789999999997543
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++||||+||++|||++|+.||...... ...... ..+... ...
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--------~~~~~i-~~~~~~-~~~ 234 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--------RLYQQI-KAGAYD-FPS 234 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHH-HHTCCC-CCT
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--------HHHHHH-HhCCCC-CCc
Confidence 2 1778999999999999999999999753321 111111 111110 001
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+. ....++++.++++ +||+.||++|||+.|+++.
T Consensus 235 ~~--~~~~s~~~~~li~---~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 PE--WDTVTPEAKDLIN---KMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TT--TTTSCHHHHHHHH---HHSCSSTTTSCCHHHHHHS
T ss_pred cc--cccCCHHHHHHHH---HHcCCChhHCCCHHHHhcC
Confidence 11 1123345555555 9999999999999999873
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=289.47 Aligned_cols=227 Identities=20% Similarity=0.252 Sum_probs=168.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc------ccHHHHHHHHHHHhcCC---CCCCc---------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK------LGEKQFLLEMKQVGLLK---HPNLE--------- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~---H~ni~--------- 338 (538)
.+++|...+.||+|+||.||+|.. .+++.||||.++... .....+.+|++++++++ ||||+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999994 578999999986322 12356778888877775 99992
Q ss_pred -------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++||||+. |+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEe
Confidence 368999997 599999988765569999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc-
Q 040267 412 DFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS- 468 (538)
Q Consensus 412 Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 468 (538)
|||+++.... .++.++|||||||++|||++|+.||......+ .+.........
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH----HHHHHHHHHCCC
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCC
Confidence 9999975432 17889999999999999999999997643321 11111111100
Q ss_pred -cCCccccc---cccccC----------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 -SGRIKDVI---DKALTG----------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 -~~~~~~~~---d~~l~~----------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.... ...... ...++++ .+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESG---AQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHH---HHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHH---HHHHHHHhcCCCccCCCHHHHhc
Confidence 00010000 000000 1122344 44555999999999999999876
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=290.88 Aligned_cols=225 Identities=19% Similarity=0.237 Sum_probs=165.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|+||+||+|.. .+++.||+|+++... ...+.+.+|++++++++|||| ..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678889999999999999996 468999999997433 223678899999999999999 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9986 6666665533 269999999999999999999999 9999999999999999999999999999975431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc--CCccccc--
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS--GRIKDVI-- 476 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 476 (538)
.++.++|||||||++|||++|..|+........ .+.......... ..+....
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD---QLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH---HHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChhhhhhhccc
Confidence 168899999999999999999888653222111 111111111100 0000000
Q ss_pred -cc----------ccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 477 -DK----------ALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 477 -d~----------~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+. .+. ....+.++.++++ +|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQ---NLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHH---HHhccChhhCCCHHHHhc
Confidence 00 000 0112344455555 999999999999999875
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=296.70 Aligned_cols=216 Identities=18% Similarity=0.249 Sum_probs=165.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcC-CCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLL-KHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||.||+|+.. +++.||+|.++... ...+.+.+|..++.++ +|||| ..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888899999999999999964 58899999997543 2235578899999988 89999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999998754 59999999999999999999999 9999999999999999999999999999975211
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++|||||||++|||++|+.||................+......... .
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 237 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R 237 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------C
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------C
Confidence 167899999999999999999999975322111111111112221111111 1
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSM 510 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 510 (538)
+ ....+.++..+++ +||+.||++||++
T Consensus 238 ~-p~~~s~~~~~li~---~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 I-PRSLSVKAASVLK---SFLNKDPKERLGC 264 (345)
T ss_dssp C-CTTSCHHHHHHHH---HHTCSSTTTSTTC
T ss_pred C-CCCCCHHHHHHHH---HHhcCCHhHCCCC
Confidence 1 1123345555555 9999999999996
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=298.41 Aligned_cols=218 Identities=18% Similarity=0.274 Sum_probs=160.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
..++|...+.||+|+||.||+|+.. +++.||||.++... ..+.+.+|++++++++|||| ..++||||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 3467888899999999999999965 58899999997543 34668899999999999999 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcccCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~- 421 (538)
+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++....
T Consensus 130 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 130 VTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999998765 58999999999999999999999 99999999999999975 88999999999875432
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++|||||||++|||++|+.||....... .+ ..... ..... ...+.
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~---~~~i~-~~~~~-~~~~~- 274 (349)
T 2w4o_A 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ----FM---FRRIL-NCEYY-FISPW- 274 (349)
T ss_dssp --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH----HH---HHHHH-TTCCC-CCTTT-
T ss_pred cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH----HH---HHHHH-hCCCc-cCCch-
Confidence 17889999999999999999999997533211 01 11111 11110 11110
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+.++.++++ +||+.||++|||+.|+++
T Consensus 275 -~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 -WDEVSLNAKDLVR---KLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred -hhhCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 0122334455555 999999999999999986
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=292.14 Aligned_cols=168 Identities=23% Similarity=0.327 Sum_probs=131.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.++... ...+.+.+|++++++++|||| ..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46788999999999999999995 468999999996432 334678899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 345 YMSNGTLYSLLHSNG----NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|++ |+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999987532 2358999999999999999999999 999999999999999999999999999987532
Q ss_pred C------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 421 G------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 421 ~------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. .++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 16789999999999999999999998643
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=291.00 Aligned_cols=212 Identities=17% Similarity=0.286 Sum_probs=171.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.++... ...+.+.+|+.+++.++|||| ..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888899999999999999954 69999999997532 335678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 9999999999998765 59999999999999999999999 9999999999999999999999999999975432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ........ +.. .+ ..
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~-~~~------~~-p~ 224 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILN-AEL------RF-PP 224 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-CCC------CC-CT
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-CCC------CC-CC
Confidence 1678999999999999999999999753321 11112111 111 01 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
..+.++.++++ +|++.||++|| +++|+++
T Consensus 225 ~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 225 FFNEDVKDLLS---RLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp TSCHHHHHHHH---HHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCHHHHHHHH---HHhccCHHHcCCCcCCCHHHHhc
Confidence 23445555555 99999999999 8888875
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=296.86 Aligned_cols=218 Identities=18% Similarity=0.254 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++|||| ..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457889999999999999999954 689999999975432 23568899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||++....
T Consensus 108 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp CCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999998665 69999999999999999999999 999999999999999865 459999999997543
Q ss_pred C----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 421 G----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 421 ~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. .++.++|||||||++|||++|+.||...... ...... ..+... ...+
T Consensus 183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i-~~~~~~-~~~~ 252 (362)
T 2bdw_A 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQI-KAGAYD-YPSP 252 (362)
T ss_dssp TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-HHTCCC-CCTT
T ss_pred CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHH-HhCCCC-CCcc
Confidence 2 1778999999999999999999999753221 111111 111110 0000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. ...+.++.+++. +||+.||++|||+.|+++.
T Consensus 253 ~~--~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 EW--DTVTPEAKSLID---SMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GG--GGSCHHHHHHHH---HHSCSSGGGSCCHHHHTTS
T ss_pred cc--cCCCHHHHHHHH---HHcCCChhhCcCHHHHhcC
Confidence 00 112334455555 9999999999999998864
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=296.77 Aligned_cols=212 Identities=18% Similarity=0.315 Sum_probs=171.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.++... ...+.+.+|+++++.++|||| ..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 46888899999999999999964 68999999996432 335678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999998755 59999999999999999999999 9999999999999999999999999999985432
Q ss_pred ------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 ------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 ------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||++|+.||...... ....... .+.. .+ ..
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~-~~~~------~~-p~ 259 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--------QIYEKIV-SGKV------RF-PS 259 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HCCC------CC-CT
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--------HHHHHHH-cCCC------CC-CC
Confidence 2688999999999999999999999753321 1111111 1111 01 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
..+.++..+++ +||+.||++||+ ++||++
T Consensus 260 ~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 260 HFSSDLKDLLR---NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp TCCHHHHHHHH---HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCHHHHHHHH---HHhhcCHHhccCCccCCHHHHHh
Confidence 23345555555 999999999998 888875
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=292.46 Aligned_cols=214 Identities=17% Similarity=0.249 Sum_probs=167.0
Q ss_pred cCCCCC-CeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHH-hcCCCCCCc---------------ccE
Q 040267 280 SNFSAQ-NVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQV-GLLKHPNLE---------------KPL 341 (538)
Q Consensus 280 ~~f~~~-~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l-~~l~H~ni~---------------~~l 341 (538)
++|... +.||+|+||.||+|.. .+++.||+|.++. ...+.+|+.++ +..+||||. .++
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 456555 6799999999999995 5689999999864 34677888888 556899992 368
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 418 (538)
||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++..
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 9999999999999998765679999999999999999999999 99999999999999998 78999999999998
Q ss_pred cCC-CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC-----CCcHHHHHHH
Q 040267 419 TNG-DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG-----KGYDDEILQF 492 (538)
Q Consensus 419 ~~~-~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-----~~~~~~~~~l 492 (538)
... .++.++|||||||++|||+||+.||......... ......+....... ...+.++.
T Consensus 170 ~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (299)
T 3m2w_A 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------PGMKTRIRMGQYEFPNPEWSEVSEEVK-- 234 (299)
T ss_dssp CTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSCCSSCTTCCSSCHHHHTTSCHHHH--
T ss_pred cccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------------HHHHHHHhhccccCCchhcccCCHHHH--
Confidence 765 4899999999999999999999999753321100 00000000000000 11233444
Q ss_pred HHHHhHccCCCCCCCCCHHHHHHH
Q 040267 493 LQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 493 ~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+++.+||+.||++|||+.|+++.
T Consensus 235 -~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 235 -MLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -HHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HHHHHHcccChhhCCCHHHHhcC
Confidence 45559999999999999999973
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=290.14 Aligned_cols=217 Identities=21% Similarity=0.255 Sum_probs=167.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~ 345 (538)
++|...+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||. .++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4577889999999999999995 468999999997543 3457899999999999999993 3699999
Q ss_pred cCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccC
Q 040267 346 MSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~ 420 (538)
+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999986431 2469999999999999999999999 999999999999999 456889999999997543
Q ss_pred C---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 G---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .++.++||||||+++|||++|+.||...... ........... . ..
T Consensus 179 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~-~----~~ 245 (285)
T 3is5_A 179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--------EVQQKATYKEP-N----YA 245 (285)
T ss_dssp --------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC-C----CC
T ss_pred CcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--------HHHhhhccCCc-c----cc
Confidence 2 1677899999999999999999999853321 11111111100 0 00
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
......++++.++++ +||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~li~---~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VECRPLTPQAVDLLK---QMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C--CCCCHHHHHHHH---HHTCSCTTTSCCHHHHHT
T ss_pred cccCcCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 001112344444444 999999999999999985
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=292.00 Aligned_cols=224 Identities=20% Similarity=0.301 Sum_probs=170.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCCc---------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNLE--------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni~--------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||+++.... ....+.+|++++.+++||||+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688889999999999999995 5789999999975432 235688999999999999991
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++||||+++|+|.+++...+ .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 179999999999999998765 59999999999999999999999 9999999999999999999999999999874
Q ss_pred cCC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 419 TNG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 419 ~~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
... .++.++||||||+++|||+||+.||...... ............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~ 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--------SVAYQHVREDPI 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcCCCC
Confidence 321 1678899999999999999999999753321 111111111110
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH-HHHHHhHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVY-ISLCSIAE 522 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl-~~L~~i~~ 522 (538)
.+.......+.++..+ +.+||+.||++||++.+++ +.+.++..
T Consensus 238 ----~~~~~~~~~~~~l~~l---i~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 238 ----PPSARHEGLSADLDAV---VLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ----CHHHHSTTCCHHHHHH---HHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ----CcccccCCCCHHHHHH---HHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 0111111223344444 4599999999999766555 55665543
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=289.07 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=170.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc----HHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||.+...... .+++.+|+..+.+++|||| ..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999964 4899999999764322 3678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDA 423 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 423 (538)
||+++++|.+++... ....++.+|+.|++.||+|||+ .+|+||||||+|||++.++.+||++++.. ..+
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~~~----~~~ 179 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPATM----PDA 179 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCCCC----TTC
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecccc----CCC
Confidence 999999999999642 3556789999999999999999 99999999999999999999999977654 347
Q ss_pred CCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCC
Q 040267 424 SLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVR 503 (538)
Q Consensus 424 ~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~d 503 (538)
+.++|||||||++|||+||+.||......+..... .. ........+.......++++..++ .+||+.|
T Consensus 180 ~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~l~~li---~~~l~~d 247 (286)
T 3uqc_A 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------ER-DTAGQPIEPADIDRDIPFQISAVA---ARSVQGD 247 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------CB-CTTSCBCCHHHHCTTSCHHHHHHH---HHHHCTT
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------HH-HhccCCCChhhcccCCCHHHHHHH---HHHcccC
Confidence 89999999999999999999999864432211000 00 000000000000112233444444 4999999
Q ss_pred CCCCCCHHHHHHHHHHhHHhc
Q 040267 504 PKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 504 P~~RPs~~evl~~L~~i~~~~ 524 (538)
|++| |+.|+++.|+++....
T Consensus 248 P~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 248 GGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp SSCC-CHHHHHHHHHHHHC--
T ss_pred CccC-CHHHHHHHHHHHhccC
Confidence 9999 9999999999987543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-35 Score=301.28 Aligned_cols=219 Identities=16% Similarity=0.255 Sum_probs=166.2
Q ss_pred cCCCCC-CeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhc-CCCCCCc---------------ccE
Q 040267 280 SNFSAQ-NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGL-LKHPNLE---------------KPL 341 (538)
Q Consensus 280 ~~f~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~-l~H~ni~---------------~~l 341 (538)
++|... ++||+|+||.||+|... +++.||||+++. ...+.+|+.++.+ .+||||+ .|+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 355554 68999999999999954 689999999864 2467788888744 5899992 368
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 418 (538)
||||+++|+|.+++.......+++.++..|+.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.
T Consensus 137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 9999999999999987655579999999999999999999999 99999999999999997 78999999999975
Q ss_pred cCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 419 TNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 419 ~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
... .++.++|||||||++|||++|+.||.......... .+...+. .+... ..
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~i~----~~~~~-~~ 287 (400)
T 1nxk_A 214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-GMKTRIR----MGQYE-FP 287 (400)
T ss_dssp CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC-SHHHHHH----HTCCC-CC
T ss_pred cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH-HHHHHHH----cCccc-CC
Confidence 432 27889999999999999999999998644322111 1211111 11110 00
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+ .....++++.++++ +||+.||++|||+.|+++.
T Consensus 288 ~~--~~~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 288 NP--EWSEVSEEVKMLIR---NLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TT--TTTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHHS
T ss_pred Cc--ccccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 00 01123345555555 9999999999999999874
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-35 Score=298.03 Aligned_cols=215 Identities=20% Similarity=0.291 Sum_probs=169.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+++++.++|||| ..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46888899999999999999954 58899999986432 334678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999998765 69999999999999999999999 9999999999999999999999999999975421
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||...... ........... ...
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~~~~~~~-~~~------ 237 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-----SSKEIVHTFET-TVV------ 237 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-----CHHHHHHHHHH-CCC------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhh-ccc------
Confidence 1577899999999999999999999753321 11111111111 100
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWS-MYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 515 (538)
.. ....+.++..+++ +||+.||++||+ +++|.+
T Consensus 238 ~~-p~~~s~~~~~li~---~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 TY-PSAWSQEMVSLLK---KLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CC-CTTSCHHHHHHHH---HHSCSSGGGSCCSHHHHHT
T ss_pred CC-CCcCCHHHHHHHH---HHhcCCHhHhcccHHHHHc
Confidence 00 1123345555555 999999999998 666654
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=286.33 Aligned_cols=214 Identities=21% Similarity=0.302 Sum_probs=167.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|++++++++|||| ..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688889999999999999995 579999999996432 234678999999999999999 33699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999998653 368999999999999999999999 9999999999999999999999999999875431
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||++|+.||......+.. .... .. +..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~~~----~~---~~~ 230 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL--------NKVV----LA---DYE 230 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CC----SS---CCC
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH--------HHHh----hc---ccC
Confidence 1567999999999999999999999754322110 0000 00 011
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ....+.++.++++ +||+.||++|||+.++++
T Consensus 231 ~-~~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 M-PSFLSIEAKDLIH---QLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp C-CTTSCHHHHHHHH---HHSCSSGGGSCCHHHHTT
T ss_pred C-ccccCHHHHHHHH---HHcccCHhhCCCHHHHhc
Confidence 1 1122344455554 999999999999999976
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=306.48 Aligned_cols=234 Identities=20% Similarity=0.233 Sum_probs=178.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~ 345 (538)
.++|...++||+|+||.||+|.. .+++.||||++..... ..++.+|++++..++|++. ..++||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 35788999999999999999995 5699999998764332 3458899999999987554 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~- 421 (538)
+ +++|.+++.... ..+++.+++.|+.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 85 ~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred C-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 9 899999998643 269999999999999999999999 999999999999999 5889999999999974321
Q ss_pred -----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 422 -----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 422 -----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.++.++|||||||++|||++|+.||........ ......+.... .
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~----~ 233 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKK----V 233 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHH----H
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhcc----c
Confidence 156789999999999999999999986433211 01111111100 0
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
...++. +.. ..+++ +.+++..||+.||++||++.+|++.|+++....+...+
T Consensus 234 ~~~~~~-l~~-~~p~~---l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~ 285 (483)
T 3sv0_A 234 ATSIEA-LCR-GYPTE---FASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFD 285 (483)
T ss_dssp HSCHHH-HHT-TSCHH---HHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred cccHHH-Hhc-CCcHH---HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCcc
Confidence 011110 001 12234 44555599999999999999999999999887766643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=305.35 Aligned_cols=223 Identities=8% Similarity=-0.022 Sum_probs=160.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHH---HHHhcCCCCCCc-------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEM---KQVGLLKHPNLE------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~---~~l~~l~H~ni~------------- 338 (538)
.+|...+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+ +.|+. +||||+
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 3577889999999999999995 478999999997643 2235577885 45555 699962
Q ss_pred ----------------------ccEEEeecCCCCHHHHhhcCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCc
Q 040267 339 ----------------------KPLVYKYMSNGTLYSLLHSNGNTALDWPSR------LRIGLGAARGLSWLHHCCHPPC 390 (538)
Q Consensus 339 ----------------------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~~i 390 (538)
.++||||++ |+|.+++...+. .+++..+ ..++.|++.||+|||+ .+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQS---KGL 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCC
Confidence 489999999 899999986432 3566666 7888999999999999 999
Q ss_pred cccCCCCCCeeeCCCCCeEEEeccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 391 LHQNISSSVILVDEDFDARIMDFGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 391 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
+||||||+|||++.++.+||+|||+++.... .++.++|||||||++|||+||+.||..
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999875432 168899999999999999999999986
Q ss_pred CcccccccccHHHHHHHHhccCCccccccccccC---CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HHHHhH
Q 040267 449 NASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG---KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI--SLCSIA 521 (538)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~~i~ 521 (538)
........ ................ ...++.+.+++. +||+.||++|||+.|+++ .++++.
T Consensus 296 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 296 VTPGIKGS----------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG---RFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp CCTTCTTC----------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHH---HHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred cCcccccc----------hhhhhhhhccccccchhhccCCCHHHHHHHH---HHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 53321100 0000000000111111 122345555555 999999999999999985 344443
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=304.14 Aligned_cols=217 Identities=15% Similarity=0.125 Sum_probs=166.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHH---HHHhcCCCCCCc------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEM---KQVGLLKHPNLE------------ 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~---~~l~~l~H~ni~------------ 338 (538)
.++|...+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|+ +.+++++||||+
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45678889999999999999994 57999999999632 22346789999 556666899981
Q ss_pred -----------------------ccEEEeecCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 040267 339 -----------------------KPLVYKYMSNGTLYSLLHSNGN-----TALDWPSRLRIGLGAARGLSWLHHCCHPPC 390 (538)
Q Consensus 339 -----------------------~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 390 (538)
.++||||+ +|+|.+++...+. ..+++..++.|+.||+.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 57999999 6899999986431 234468889999999999999999 999
Q ss_pred cccCCCCCCeeeCCCCCeEEEeccCCcccCC------------------------------CCCCccCcccHHHHHHHHH
Q 040267 391 LHQNISSSVILVDEDFDARIMDFGFSRLTNG------------------------------DASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 391 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~DV~S~Gvvl~ell 440 (538)
+||||||+|||++.++.+||+|||+++.... .++.++|||||||++|||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999985432 3778999999999999999
Q ss_pred hCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HHH
Q 040267 441 TGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI--SLC 518 (538)
Q Consensus 441 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~ 518 (538)
||+.||........ ...+... ....++++.++++ +||+.||++|||+.|+++ .++
T Consensus 308 tg~~Pf~~~~~~~~-----------------~~~~~~~---~~~~~~~~~~li~---~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 308 CADLPITKDAALGG-----------------SEWIFRS---CKNIPQPVRALLE---GFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HSSCCC------CC-----------------SGGGGSS---CCCCCHHHHHHHH---HHTCSSGGGCCCHHHHHTSHHHH
T ss_pred HCCCCCcccccccc-----------------hhhhhhh---ccCCCHHHHHHHH---HHcCCCchhCCCHHHHhhChHHH
Confidence 99999975332111 1111110 0122345555555 999999999999999996 455
Q ss_pred HhHH
Q 040267 519 SIAE 522 (538)
Q Consensus 519 ~i~~ 522 (538)
++.+
T Consensus 365 ~~~~ 368 (377)
T 3byv_A 365 QLRT 368 (377)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=289.02 Aligned_cols=228 Identities=21% Similarity=0.298 Sum_probs=171.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc---HHHHHHHHHHHhcCCCCCCc-----------ccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG---EKQFLLEMKQVGLLKHPNLE-----------KPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~H~ni~-----------~~lv~e 344 (538)
++|...+.||+|+||.||+|... +|+.||+|++...... .+.+.+|++++++++||||. .++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56888899999999999999964 5899999998654322 35688999999999999993 369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887655 59999999999999999999999 9999999999999999999999999999975431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHH--------HHHHHhccCCc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN--------WIDQLSSSGRI 472 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 472 (538)
.++.++||||||+++|||++|+.||......+... .+.. +..........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY-LIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCSCCHHHHHHHHTCGGG
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhccccccccccccccccc
Confidence 26889999999999999999999998644322110 0000 00000000000
Q ss_pred c--ccccccc------cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 473 K--DVIDKAL------TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 473 ~--~~~d~~l------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ...++.- .....+.. +.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYP---ALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHH---HHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHH---HHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0000000 00112223 4455559999999999999999863
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=287.69 Aligned_cols=225 Identities=18% Similarity=0.246 Sum_probs=172.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|+.++++++|||| ..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467899999999999999999954 688999999975432 23678899999999999999 33699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998754 59999999999999999999999 9999999999999999999999999999864321
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++||||||+++|||++|+.||...... ......... .. .+
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~~~~~-~~---~~ 254 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---------VMGAHINQA-IP---RP 254 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---------HHHHHHHSC-CC---CG
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---------HHHHHhccC-CC---Cc
Confidence 1677999999999999999999999753211 111111111 00 01
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHhHHhc
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKW-SMYQVYISLCSIAEQL 524 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~i~~~~ 524 (538)
.......+.++..+++ +||+.||++|| |++++++.|+++....
T Consensus 255 ~~~~~~~~~~l~~li~---~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 255 STVRPGIPVAFDAVIA---RGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GGTSTTCCTHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cccCCCCCHHHHHHHH---HhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0111122334444555 99999999999 9999999999876544
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=297.10 Aligned_cols=215 Identities=21% Similarity=0.308 Sum_probs=169.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
+.|...+.||+|+||.||+|.. .+++.||||++..... ..+++.+|++++++++||||+ .++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477888999999999999995 5789999999964322 235688999999999999993 35999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||++ |+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 9997 68888886433 369999999999999999999999 999999999999999999999999999987543
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
..++.++|||||||++|||++|+.||..... ........... .+...
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--------~~~~~~~~~~~------~~~~~ 274 (348)
T 1u5q_A 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNE------SPALQ 274 (348)
T ss_dssp CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSC------CCCCC
T ss_pred cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhcC------CCCCC
Confidence 1267789999999999999999999975322 11122222111 11111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....++.+..+++ +||+.||++|||+.++++.
T Consensus 275 ~~~~~~~l~~li~---~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 SGHWSEYFRNFVD---SCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CTTSCHHHHHHHH---HHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCHHHHHHHH---HHcccChhhCcCHHHHhhC
Confidence 2233445555555 9999999999999999864
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=305.78 Aligned_cols=212 Identities=22% Similarity=0.378 Sum_probs=171.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.++|||| ..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46788899999999999999964 79999999996532 234678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999998655 69999999999999999999999 99999999999999999999999999999864321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+.++|||||||++|||++|+.||...... ....... .+...
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~i~-~~~~~------- 234 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--------TLFKKIC-DGIFY------- 234 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--------HHHHHHH-TTCCC-------
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHh-cCCcC-------
Confidence 357899999999999999999999853321 1111111 11110
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+.++.++++ +||+.||++|||+.|+++
T Consensus 235 ~p~~~s~~~~~Li~---~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 TPQYLNPSVISLLK---HMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCTTCCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CCccCCHHHHHHHH---HHcCCCchhCcCHHHHHh
Confidence 01122345555555 999999999999999987
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=299.68 Aligned_cols=217 Identities=17% Similarity=0.270 Sum_probs=167.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc------ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK------LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
+.|...+.||+|+||.||+|.. .+++.||||.++... ...+.+.+|+.+++.++|||| ..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4688889999999999999995 468999999986321 245779999999999999999 3369
Q ss_pred EEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a 416 (538)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999998886532 2358999999999999999999999 99999999999999986654 999999999
Q ss_pred cccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 417 RLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 417 ~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
+.... .++.++|||||||++|||++|+.||..... .+ ..... .+...
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~---~~~i~-~~~~~ 250 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RL---FEGII-KGKYK 250 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HH---HHHHH-HTCCC
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HH---HHHHH-cCCCC
Confidence 75432 167899999999999999999999975321 11 11111 11110
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.++... ...++++.+++ .+||+.||++|||+.|+++
T Consensus 251 --~~~~~~-~~~s~~~~~li---~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 --MNPRQW-SHISESAKDLV---RRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --CCHHHH-TTSCHHHHHHH---HHHTCSSTTTSCCHHHHHT
T ss_pred --CCcccc-ccCCHHHHHHH---HHHCCCChhHCcCHHHHhc
Confidence 000000 11233444444 4999999999999999986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=297.83 Aligned_cols=225 Identities=20% Similarity=0.301 Sum_probs=177.6
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc----------
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE---------- 338 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~---------- 338 (538)
.+.++....++|...+.||+|+||.||+|.. .+++.||||.+.......+.+.+|+.++.++ +||||.
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 3344555677899999999999999999996 5789999999976655668899999999999 799992
Q ss_pred -------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 339 -------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 339 -------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
.++||||+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEEC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEe
Confidence 3699999999999999987644469999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 412 DFGFSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 412 Dfg~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
|||++..... .++.++||||||+++|||++|+.||....... ..
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~ 243 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--------AL 243 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HH
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--------HH
Confidence 9999875321 15778999999999999999999997532211 11
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..... ... +.......+..+..+++ +||+.||++|||+.|+++
T Consensus 244 ~~~~~-~~~-----~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 244 FLIPR-NPA-----PRLKSKKWSKKFQSFIE---SCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHH-SCC-----CCCSCSCSCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred HHhhc-Ccc-----ccCCccccCHHHHHHHH---HHhccChhhCCCHHHHhh
Confidence 11111 111 11112223445555555 999999999999999987
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=304.75 Aligned_cols=224 Identities=16% Similarity=0.179 Sum_probs=175.8
Q ss_pred HHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC---------
Q 040267 272 LVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL--------- 337 (538)
Q Consensus 272 ~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni--------- 337 (538)
+.++....++|...++||+|+||.||+|+.. +++.||+|++++.. ...+.+.+|+.+++.++||||
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3456667788999999999999999999964 58999999996522 223458899999999999999
Q ss_pred --cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 338 --EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 338 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
..|+||||+++|+|.++++.. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccce
Confidence 346999999999999999865 48999999999999999999999 9999999999999999999999999999
Q ss_pred CcccCCC----------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 416 SRLTNGD----------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 416 a~~~~~~----------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
++..... ++.++|||||||++|||++|+.||......+ ......
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--------~~~~i~ 286 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKIM 286 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHH
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh--------HHHHHH
Confidence 9754321 4578999999999999999999998543221 111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE--KWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 516 (538)
........ + .....+.++..+++ +|++.+|.+ ||+++||++.
T Consensus 287 ~~~~~~~~--p--~~~~~s~~~~~li~---~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 287 NHKNSLTF--P--DDNDISKEAKNLIC---AFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp THHHHCCC--C--TTCCCCHHHHHHHH---HHSSCGGGCTTSSCHHHHHTS
T ss_pred hccccccC--C--CcccccHHHHHHHH---HHccChhhhCCCCCHHHHhcC
Confidence 10000000 0 01123456666666 999999988 9999999864
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=296.86 Aligned_cols=219 Identities=18% Similarity=0.296 Sum_probs=171.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|++++++++|||| ..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457888999999999999999954 68999999997543 334578999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC--CCCeEEEeccCCcccCCC-
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE--DFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~- 422 (538)
+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999997653 359999999999999999999999 99999999999999974 478999999999865421
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
++.++|||||||++|||++|+.||...... ........ .... .+...
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~i~~-~~~~--~~~~~- 273 (387)
T 1kob_A 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--------ETLQNVKR-CDWE--FDEDA- 273 (387)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHH-CCCC--CCSST-
T ss_pred ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-CCCC--CCccc-
Confidence 678899999999999999999999853321 11111111 1110 01111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++.++++ +||+.||++|||+.|+++.
T Consensus 274 ~~~~s~~~~~li~---~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIK---NLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHH---HHcCCChhHCcCHHHHhhC
Confidence 0122345555555 9999999999999999873
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=295.93 Aligned_cols=214 Identities=21% Similarity=0.305 Sum_probs=170.3
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------cc
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EK 339 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~ 339 (538)
...++|...+.||+|+||.||+|+.. +++.||+|.++.. ....+.+..|..++..+ +|||| ..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45678999999999999999999964 6889999999753 23456688899999887 89999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 69999999999999998754 59999999999999999999999 99999999999999999999999999999753
Q ss_pred CC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 420 NG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 420 ~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.. .++.++|||||||++|||++|+.||...... ........ +.
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~-~~----- 234 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRM-DN----- 234 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CC-----
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHh-CC-----
Confidence 21 1688999999999999999999999853321 11111111 11
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMY-QVY 514 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 514 (538)
+.+ ....+.++.++++ +||+.||++||++. ||+
T Consensus 235 -~~~-p~~~s~~~~~li~---~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 -PFY-PRWLEKEAKDLLV---KLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -CCC-CTTSCHHHHHHHH---HHSCSSGGGSBTTBSCGG
T ss_pred -CCC-CcccCHHHHHHHH---HHhcCCHhHcCCChHHHH
Confidence 111 1123445555555 99999999999997 664
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=284.14 Aligned_cols=214 Identities=22% Similarity=0.284 Sum_probs=170.5
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|... ++..||+|.+.... .....+.+|+.++++++|||| ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457888899999999999999854 57899999986432 234678999999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999998765 58999999999999999999999 9999999999999999999999999998864322
Q ss_pred --------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 --------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 --------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
.++.++||||||+++|||++|+.||...... ........ .. ...
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~------~~~- 226 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISR-VE------FTF- 226 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-TC------CCC-
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHh-CC------CCC-
Confidence 1678999999999999999999999753321 11111111 10 001
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....++.+.++++ +||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~li~---~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 PDFVTEGARDLIS---RLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CTTSCHHHHHHHH---HHCCSSGGGSCCHHHHHHC
T ss_pred CCcCCHHHHHHHH---HHhccChhhCCCHHHHhhC
Confidence 1123344555555 9999999999999999975
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=295.48 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=161.8
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcC-CCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLL-KHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~ 343 (538)
++|+..++||+|+||+||+|... +++.||||++..... ...++..|+..+.++ +||||+ .++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46888999999999999999965 799999999865332 233455666666655 899993 36999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+ +|+|.+++...+ ..++|..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 679999887654 369999999999999999999999 8999999999999999999999999999875432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++|..|+..... |. . ...+.. .+.+..
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~-~-~~~~~~----~~~~~~ 275 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----------WQ-Q-LRQGYL----PPEFTA 275 (311)
T ss_dssp ---CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HH-H-HTTTCC----CHHHHT
T ss_pred CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HH-H-HhccCC----Cccccc
Confidence 167899999999999999999777653111 11 1 111111 111111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++++ .+++.+||+.||++|||+.|+++
T Consensus 276 -~~~~~l---~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 276 -GLSSEL---RSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -TSCHHH---HHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCCHHH---HHHHHHHcCCChhhCcCHHHHHh
Confidence 122344 44555999999999999999985
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=290.23 Aligned_cols=213 Identities=18% Similarity=0.263 Sum_probs=163.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCCCC-----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHPNL-----------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ni-----------~ 338 (538)
.++|...+.||+|+||.||+++. .+++.||+|+++... .....+.+|++++++++|||| .
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688889999999999999996 468999999997532 223567889999999999999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 469999999999999998755 58999999999999999999999 9999999999999999999999999999874
Q ss_pred cCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 419 TNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 419 ~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
... .++.++||||||+++|||++|+.||...... ........ ...
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~-~~~--- 238 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--------KTIDKILK-CKL--- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHH-TCC---
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHh-CCC---
Confidence 211 1678999999999999999999999853321 11111111 110
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
.+ ....+.++.++++ +||+.||++|| ++.|+++
T Consensus 239 ---~~-p~~~~~~~~~li~---~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ---NL-PPYLTQEARDLLK---KLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---CC-CTTSCHHHHHHHH---HHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---CC-CCCCCHHHHHHHH---HHHhcCHhhccCCCCCCHHHHHc
Confidence 01 1123345555555 99999999999 7778776
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=283.06 Aligned_cols=213 Identities=22% Similarity=0.276 Sum_probs=166.8
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------ccEE
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------KPLV 342 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------~~lv 342 (538)
|...+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||+ .++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 55567899999999999995 468899999987533 2346689999999999999992 3699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeC-CCCCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVD-EDFDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~ 419 (538)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+ |+||||||+||+++ +++.+||+|||++...
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999998754 58999999999999999999999 77 99999999999998 7899999999998643
Q ss_pred CC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 420 NG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 420 ~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.. .++.++||||||+++|||++|+.||..... ......... .+......+
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~-~~~~~~~~~-- 252 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVT-SGVKPASFD-- 252 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHT-TTCCCGGGG--
T ss_pred cccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHHHHHHh-ccCCccccC--
Confidence 32 167899999999999999999999975322 111222111 111111111
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++. +++.+||+.||++|||+.|+++
T Consensus 253 ---~~~~~~l~---~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 ---KVAIPEVK---EIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GCCCHHHH---HHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCCCHHHH---HHHHHHccCChhhCCCHHHHhh
Confidence 11223444 4555999999999999999985
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=296.33 Aligned_cols=219 Identities=14% Similarity=0.095 Sum_probs=174.4
Q ss_pred HhcCCCCCCeEeecCCceEEEEE------eCCCCEEEEEEcccccccHHHHHHHHHHHhcCC---CCCC-----------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAM------LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK---HPNL----------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~------~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---H~ni----------- 337 (538)
..++|...+.||+|+||.||+|. ..+++.||||+++.. ...++..|++++.+++ |+||
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 34678888999999999999994 456889999999753 3567888888888887 8888
Q ss_pred cccEEEeecCCCCHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----------
Q 040267 338 EKPLVYKYMSNGTLYSLLHSN---GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---------- 404 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---------- 404 (538)
..++||||+++|+|.+++... ....+++..++.|+.|++.||+|||+ .+|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccccc
Confidence 346999999999999999742 23469999999999999999999999 99999999999999998
Q ss_pred -CCCeEEEeccCCcccC-------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCccccccccc
Q 040267 405 -DFDARIMDFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGN 458 (538)
Q Consensus 405 -~~~~kl~Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 458 (538)
++.+||+|||+++... ..++.++|||||||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 8999999999996321 016889999999999999999999996422110
Q ss_pred HHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCC-CCHHHHHHHHHHhHHhc
Q 040267 459 LVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEK-WSMYQVYISLCSIAEQL 524 (538)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~evl~~L~~i~~~~ 524 (538)
..+...+......+....+++ .|++.+|.+| |++.++.+.|+++.+..
T Consensus 293 ---------------~~~~~~~~~~~~~~~~~~~~~---~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ---------------CKPEGLFRRLPHLDMWNEFFH---VMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ---------------EEECSCCTTCSSHHHHHHHHH---HHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ---------------eeechhccccCcHHHHHHHHH---HHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 011111222233556666666 9999999998 68899999999887664
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=295.87 Aligned_cols=209 Identities=19% Similarity=0.281 Sum_probs=169.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCCc---------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNLE--------- 338 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni~--------- 338 (538)
..++|...+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++++++||||+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356788999999999999999994 5688999999975431 223577899999999999993
Q ss_pred --ccEEEeecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccC
Q 040267 339 --KPLVYKYMSNG-TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGF 415 (538)
Q Consensus 339 --~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 415 (538)
.++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 35999999877 9999998765 59999999999999999999999 9999999999999999999999999999
Q ss_pred CcccCCC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 416 SRLTNGD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 416 a~~~~~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
++..... .+.++||||||+++|||++|+.||...... .
T Consensus 177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------------~ 237 (335)
T 3dls_A 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------------V 237 (335)
T ss_dssp CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------T
T ss_pred ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------H
Confidence 9754321 367889999999999999999999742110 0
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..... .....++++..+++ +||+.||++|||+.|+++.
T Consensus 238 ~~~~~---~~~~~~~~l~~li~---~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 EAAIH---PPYLVSKELMSLVS---GLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TTCCC---CSSCCCHHHHHHHH---HHTCSSGGGSCCHHHHHHC
T ss_pred hhccC---CCcccCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 00000 11123345555555 9999999999999999874
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=295.09 Aligned_cols=223 Identities=21% Similarity=0.279 Sum_probs=171.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCC-CCCCc------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLK-HPNLE------------------ 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-H~ni~------------------ 338 (538)
.+|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++.++. ||||+
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4678889999999999999995 468999999986433 33467889999999996 99993
Q ss_pred -ccEEEeecCCCCHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeCCCCCeEEEecc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSN-GNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
.++||||+. |+|.+++... ....+++.+++.++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 368999996 7999988752 22369999999999999999999999 77 9999999999999999999999999
Q ss_pred CCcccCC--------------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccccccc
Q 040267 415 FSRLTNG--------------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK 456 (538)
Q Consensus 415 ~a~~~~~--------------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~ 456 (538)
+++.... .++.++||||||+++|||+||+.||.......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--- 260 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR--- 260 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---
Confidence 9875321 14668999999999999999999997532210
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
... +... .. .....+..+. +++.+||+.||++|||+.|+++.|+++.+.....
T Consensus 261 -----~~~-----~~~~----~~-~~~~~~~~~~---~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 261 -----IVN-----GKYS----IP-PHDTQYTVFH---SLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp ---------------CC----CC-TTCCSSGGGH---HHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred -----hhc-----Cccc----CC-cccccchHHH---HHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 000 0000 00 0111222344 4555999999999999999999999998765443
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=307.36 Aligned_cols=228 Identities=17% Similarity=0.176 Sum_probs=176.6
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC--------
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-------- 337 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-------- 337 (538)
.+.++....++|...++||+|+||.||+|+.. +++.||+|++++.. .....+.+|+.++..++||||
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 44566667889999999999999999999965 47899999996522 122348899999999999999
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchh
Confidence 3469999999999999998743 269999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC-----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 415 FSRLTNG-----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 415 ~a~~~~~-----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
+++.... .++.++|||||||++|||++|+.||......+... .+..+...
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~-~i~~~~~~ 299 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHKER 299 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHHTHHHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH-hhhhcccc
Confidence 9964321 15678999999999999999999998643321110 01110000
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE--KWSMYQVYIS 516 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 516 (538)
-.+ +.. ....++++.++++ +|+..+|++ ||+++|+++.
T Consensus 300 ----~~~-----p~~-~~~~s~~~~dLi~---~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 ----FQF-----PTQ-VTDVSENAKDLIR---RLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ----CCC-----CSS-CCCSCHHHHHHHH---TTSSCGGGCTTTTTTHHHHTS
T ss_pred ----ccC-----Ccc-cccCCHHHHHHHH---HHhcccccccCCCCHHHHhCC
Confidence 000 000 0123456666666 999888888 9999999863
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=296.18 Aligned_cols=224 Identities=21% Similarity=0.339 Sum_probs=172.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~ 339 (538)
.++|...+.||+|+||.||+|+. .++..||||.+.... ....++.+|+.++++++|||| ..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35788889999999999999984 247789999996432 334678999999999999999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEE
Q 040267 340 PLVYKYMSNGTLYSLLHSNGN-----TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIM 411 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 411 (538)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence 699999999999999987542 358999999999999999999999 99999999999999994 4569999
Q ss_pred eccCCcccC-------------------------CCCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHH
Q 040267 412 DFGFSRLTN-------------------------GDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 412 Dfg~a~~~~-------------------------~~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
|||+++... ..++.++||||||+++|||+| |+.||...... .+...+
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~-- 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFV-- 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHH--
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHHHH--
Confidence 999886321 126889999999999999998 99999753221 111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. .+.... . ....+..+. +++.+||+.||.+|||+.||++.|+.+...
T Consensus 259 -~-~~~~~~-----~-~~~~~~~l~---~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 259 -T-SGGRMD-----P-PKNCPGPVY---RIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -H-TTCCCC-----C-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -h-cCCCCC-----C-CCCCCHHHH---HHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1 111100 0 111233444 455599999999999999999999988764
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=288.70 Aligned_cols=216 Identities=16% Similarity=0.242 Sum_probs=170.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-------ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-------LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|... +|+.||+|.++... ...+++.+|+.++++++|||| ..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45888899999999999999954 68999999996432 135779999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFS 416 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a 416 (538)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999998754 68999999999999999999999 9999999999999999887 7999999999
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+.... .++.++||||||+++|||++|+.||...... ........ ...
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~-~~~-- 235 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITS-VSY-- 235 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHT-TCC--
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHh-ccc--
Confidence 75432 1678999999999999999999999753321 11111111 100
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++.... ..+..+.++ +.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~-~~~~~~~~l---i~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFS-HTSELAKDF---IRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHT-TCCHHHHHH---HHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhc-ccCHHHHHH---HHHHcCCChhhCcCHHHHhc
Confidence 00111101 122344444 44999999999999999987
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=299.71 Aligned_cols=233 Identities=16% Similarity=0.215 Sum_probs=173.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC--------CCCC------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK--------HPNL------------ 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--------H~ni------------ 337 (538)
.++|...+.||+|+||.||+|+. .+++.||||+++......+.+.+|+++++.++ |+||
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 36788999999999999999984 56889999999866555678899999999996 5666
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCC-------
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDF------- 406 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~------- 406 (538)
..++||||+ +|+|.+++.......+++..+..++.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhh
Confidence 236999999 5677777766544569999999999999999999999 7 999999999999999775
Q ss_pred ------------------------------------------CeEEEeccCCcccCC--------------------CCC
Q 040267 407 ------------------------------------------DARIMDFGFSRLTNG--------------------DAS 424 (538)
Q Consensus 407 ------------------------------------------~~kl~Dfg~a~~~~~--------------------~~~ 424 (538)
.+||+|||+++.... .++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 271 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYN 271 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCC
Confidence 899999999974432 278
Q ss_pred CccCcccHHHHHHHHHhCCCCCCCCcccccccc-cHHHHHHHHhcc--------CC-----------ccccccccc----
Q 040267 425 LQKDVHGFGVVLLELVTGQKPFEINASEEGYKG-NLVNWIDQLSSS--------GR-----------IKDVIDKAL---- 480 (538)
Q Consensus 425 ~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~--------~~-----------~~~~~d~~l---- 480 (538)
.++|||||||++|||+||+.||......+.... .....+...... +. ...+.+...
T Consensus 272 ~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 1wak_A 272 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351 (397)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHH
T ss_pred cHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchh
Confidence 899999999999999999999986443221110 111111111000 00 000000000
Q ss_pred -----cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 -----TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 -----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...........+.+++.+||+.||++|||+.|+++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01223455566778888999999999999999985
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=284.66 Aligned_cols=218 Identities=18% Similarity=0.252 Sum_probs=170.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|++++++++|||| ..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46788899999999999999995 4589999999975432 23568899999999999999 336999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999988765 59999999999999999999999 99999999999999986655 9999999986443
Q ss_pred C----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 421 G----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 421 ~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. .++.++||||||+++|||++|+.||...... ....... .+... ...+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~-~~~~~-~~~~ 229 (284)
T 3kk8_A 160 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIK-AGAYD-YPSP 229 (284)
T ss_dssp SSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HTCCC-CCTT
T ss_pred cCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHH-hcccc-CCch
Confidence 2 1678999999999999999999999753321 1111111 11110 0000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.....+.++.++++ +|++.||++|||+.|+++.
T Consensus 230 --~~~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 --EWDTVTPEAKSLID---SMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --TTTTSCHHHHHHHH---HHSCSSTTTSCCHHHHTTS
T ss_pred --hhcccCHHHHHHHH---HHcccChhhCCCHHHHhcC
Confidence 01122344555555 9999999999999999873
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=297.64 Aligned_cols=214 Identities=15% Similarity=0.210 Sum_probs=165.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCC--CCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKH--PNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H--~ni-----------~~~lv~ 343 (538)
+.|...+.||+|+||.||++...+++.||||++..... ..+.+.+|++++.+++| +|| ..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 45788899999999999999988899999999865332 23678999999999986 888 346899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
| +.+|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||+++....
T Consensus 89 e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp C-CCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred e-CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 9 46789999998765 69999999999999999999999 9999999999999997 57899999999975421
Q ss_pred ----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 422 ----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 422 ----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
.++.++|||||||++|||++|+.||..... .........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~~~ 234 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHAII 234 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHHHH
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHHHHHh
Confidence 145689999999999999999999974221 111111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...... .. ....+.++.+ ++.+||+.||.+|||+.|+++.
T Consensus 235 ~~~~~~-----~~-~~~~~~~l~~---li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 DPNHEI-----EF-PDIPEKDLQD---VLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CTTSCC-----CC-CCCSCHHHHH---HHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCccc-----CC-cccCCHHHHH---HHHHHcCCChhHCCCHHHHHhC
Confidence 111000 00 1122334444 4459999999999999999864
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=301.09 Aligned_cols=220 Identities=20% Similarity=0.278 Sum_probs=168.2
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCCc--------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
...++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+|++++++++||||+
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3457899999999999999999995 4689999999864321 112478999999999999993
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEec
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDF 413 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Df 413 (538)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeec
Confidence 369999999999999987665 69999999999999999999999 999999999999999754 45999999
Q ss_pred cCCcccCCC-------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 414 GFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 414 g~a~~~~~~-------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
|+++..... ++.++|||||||++|||++|+.||....... .+...+.
T Consensus 287 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~~i~---- 358 (419)
T 3i6u_A 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQIT---- 358 (419)
T ss_dssp STTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHHHHHH----
T ss_pred ccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHHHHHh----
Confidence 999854321 4568999999999999999999997533211 1222111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+.... . +... ...++.+ .+++.+||+.||++|||+.|+++
T Consensus 359 ~~~~~~-~-~~~~-~~~~~~~---~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 359 SGKYNF-I-PEVW-AEVSEKA---LDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TTCCCC-C-HHHH-TTSCHHH---HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCCCCC-C-chhh-cccCHHH---HHHHHHHccCChhHCcCHHHHhC
Confidence 111100 0 0000 1122344 44555999999999999999987
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=304.82 Aligned_cols=227 Identities=18% Similarity=0.183 Sum_probs=175.3
Q ss_pred cCHHHHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-------
Q 040267 270 LKLVHLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL------- 337 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni------- 337 (538)
+.+.+.....++|...+.||+|+||.||+|+.. +|+.||+|++++.. ...+.+.+|..++..++||||
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667889999999999999999999964 69999999996522 122448899999999999999
Q ss_pred ----cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 338 ----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 338 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
..|+||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeec
Confidence 3469999999999999998643 259999999999999999999999 99999999999999999999999999
Q ss_pred cCCcccCC-------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHH
Q 040267 414 GFSRLTNG-------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNW 462 (538)
Q Consensus 414 g~a~~~~~-------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 462 (538)
|+++.... .++.++|||||||++|||++|+.||......+.
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-------- 278 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-------- 278 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH--------
Confidence 99864321 147789999999999999999999986433211
Q ss_pred HHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCC---CCHHHHHH
Q 040267 463 IDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEK---WSMYQVYI 515 (538)
Q Consensus 463 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~evl~ 515 (538)
......... ...-+.. ....+.++.++++ +|+. +|.+| |+++||++
T Consensus 279 ~~~i~~~~~--~~~~p~~-~~~~s~~~~dli~---~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 279 YGKIVHYKE--HLSLPLV-DEGVPEEARDFIQ---RLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHTHHH--HCCCC-----CCCHHHHHHHH---TTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHhccc--CcCCCcc-ccCCCHHHHHHHH---HHcC-ChhhcCCCCCHHHHhc
Confidence 111111000 0000111 1123456666666 9999 99998 58988875
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=292.41 Aligned_cols=214 Identities=20% Similarity=0.269 Sum_probs=169.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------ccc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EKP 340 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~~ 340 (538)
..++|...+.||+|+||.||+|+.. +++.||+|.++.. ....+.+..|..++..+ +|||| ..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3467899999999999999999965 4889999999753 23456788999999988 79999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999998755 59999999999999999999999 999999999999999999999999999997531
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++|||||||++|||++|+.||...... ........ +..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~-~~~----- 238 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIME-HNV----- 238 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC-----
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHh-CCC-----
Confidence 1 1678999999999999999999999853321 11122111 111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
.+ ....+.++..+++ +||+.||++||+ ++||++
T Consensus 239 -~~-p~~~s~~~~~li~---~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 -AY-PKSMSKEAVAICK---GLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -CC-CTTSCHHHHHHHH---HHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -CC-CCCCCHHHHHHHH---HHhhcCHHHcCCCCCCCHHHHhc
Confidence 01 1123345555555 999999999996 466654
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=291.33 Aligned_cols=216 Identities=20% Similarity=0.291 Sum_probs=162.1
Q ss_pred CCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC-----------cccEEEeecCCCCH
Q 040267 285 QNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni-----------~~~lv~e~~~~gsL 351 (538)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.++..++ |||| ..++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 478999999999999964 6899999999653 3467889999999997 9999 34699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---CeEEEeccCCcccCC-------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DARIMDFGFSRLTNG------- 421 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~------- 421 (538)
.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++....
T Consensus 94 ~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 168 (325)
T 3kn6_A 94 FERIKKKK--HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168 (325)
T ss_dssp HHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccc
Confidence 99998765 69999999999999999999999 9999999999999997665 799999999975422
Q ss_pred ----------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 422 ----------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 422 ----------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
.++.++||||||+++|||++|+.||........ .....+.... ...+.... ..... ...
T Consensus 169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~-i~~~~~~~-~~~~~--~~~ 243 (325)
T 3kn6_A 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKK-IKKGDFSF-EGEAW--KNV 243 (325)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHH-HTTTCCCC-CSHHH--HTS
T ss_pred cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHH-HHcCCCCC-Ccccc--cCC
Confidence 167889999999999999999999986432211 1112222222 11111100 00000 012
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
++++. +++.+||+.||++|||+.|+++
T Consensus 244 s~~~~---~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 244 SQEAK---DLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CHHHH---HHHHHHHCCCTTTCCCTTTSTT
T ss_pred CHHHH---HHHHHHCCCChhHCCCHHHHhc
Confidence 23444 4555999999999999999874
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=296.26 Aligned_cols=212 Identities=20% Similarity=0.296 Sum_probs=162.1
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCCCCH
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSNGTL 351 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~gsL 351 (538)
.+.||+|+||.||+|.. .+|+.||+|+++... ...+++.+|++++++++|||| ..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56799999999999995 569999999997643 345679999999999999999 33699999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee--CCCCCeEEEeccCCcccCCC-------
Q 040267 352 YSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV--DEDFDARIMDFGFSRLTNGD------- 422 (538)
Q Consensus 352 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~------- 422 (538)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 174 ~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 174 FDRIIDES-YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp HHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 99987643 258999999999999999999999 999999999999999 67789999999999864321
Q ss_pred ---------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHH
Q 040267 423 ---------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDD 487 (538)
Q Consensus 423 ---------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 487 (538)
++.++|||||||++|||++|+.||...... .......... . ...+... ...++
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~-~-~~~~~~~--~~~~~ 317 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACR-W-DLEDEEF--QDISE 317 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTC-C-CSCSGGG--TTSCH
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcc-C-CCChhhh--ccCCH
Confidence 577899999999999999999999854321 1111111111 0 0001100 12234
Q ss_pred HHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 488 EILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 488 ~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
++.++++ +||+.||.+|||+.|+++
T Consensus 318 ~~~~li~---~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 318 EAKEFIS---KLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHH---HHcCCChhhCCCHHHHhc
Confidence 5555555 999999999999999997
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=282.17 Aligned_cols=217 Identities=17% Similarity=0.238 Sum_probs=170.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc-cccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC-KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... ++..||+|.+... ....+.+.+|++++++++|||| ..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 346888899999999999999964 5789999999753 3446789999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCCC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 422 (538)
+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999998755 58999999999999999999999 999999999999999 78899999999998754321
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
++.++||||||+++|||++|+.||...... ....... .+... ......
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~-~~~~~~- 231 (277)
T 3f3z_A 163 KMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIR-EGTFT-FPEKDW- 231 (277)
T ss_dssp SCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HCCCC-CCHHHH-
T ss_pred cchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHH-hCCCC-CCchhh-
Confidence 578999999999999999999999753321 1111111 11110 000000
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++. +++.+|++.||++|||+.|+++
T Consensus 232 -~~~~~~~~---~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 232 -LNVSPQAE---SLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -TTSCHHHH---HHHHHHTCSSTTTSCCHHHHTT
T ss_pred -hcCCHHHH---HHHHHHccCChhhCcCHHHHhc
Confidence 01223444 4555999999999999999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=289.55 Aligned_cols=225 Identities=24% Similarity=0.358 Sum_probs=156.6
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
..++|...+.||+|+||.||+|.. .+++.||||.+.... ...+++.+|+.++++++|||| ..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 356788999999999999999994 468999999986532 334678899999999999999 346999
Q ss_pred eecCCCCHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 344 KYMSNGTLYSLLHSN------GNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 344 e~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998741 22369999999999999999999999 999999999999999999999999999875
Q ss_pred ccCC-----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 418 LTNG-----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 418 ~~~~-----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
.... .++.++||||||+++|||++|+.||....... .........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~- 243 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK-----VLMLTLQND- 243 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-----HHHHHHTSS-
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh-----HHHHHhccC-
Confidence 4311 16889999999999999999999998643321 111110000
Q ss_pred cCCcc-ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 SGRIK-DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 ~~~~~-~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..... ...++.... ..+.++.+ ++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~~~---li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 244 PPSLETGVQDKEMLK-KYGKSFRK---MISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCTTC-----CCCC-CCCHHHHH---HHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccccccccchhhh-hhhHHHHH---HHHHHccCChhhCcCHHHHhh
Confidence 00010 011111111 22334444 455999999999999999986
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=293.17 Aligned_cols=175 Identities=22% Similarity=0.271 Sum_probs=150.2
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc------------cHHHHHHHHHHHhcCCCCCCc
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL------------GEKQFLLEMKQVGLLKHPNLE 338 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~H~ni~ 338 (538)
.+.++....++|...+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45688889999999999999999999999987899999999864221 126789999999999999992
Q ss_pred ----------------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee
Q 040267 339 ----------------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402 (538)
Q Consensus 339 ----------------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 402 (538)
.++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEE
Confidence 269999998 68988887554 369999999999999999999999 999999999999999
Q ss_pred CCCCCeEEEeccCCcccC-----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 403 DEDFDARIMDFGFSRLTN-----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 403 ~~~~~~kl~Dfg~a~~~~-----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.++.+||+|||+++... ..++.++|||||||++|||++|+.||....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999999999999997322 126788999999999999999999998643
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=289.27 Aligned_cols=219 Identities=21% Similarity=0.323 Sum_probs=171.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-------------ccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-------------KPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-------------~~l 341 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||. .++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457888899999999999999964 68999999997533 2345689999999999999992 369
Q ss_pred EEeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----ccccCCCCCCeeeCCCCCeEEEecc
Q 040267 342 VYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPP-----CLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997532 2359999999999999999999999 77 9999999999999999999999999
Q ss_pred CCcccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 415 FSRLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 415 ~a~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
+++.... .++.++||||||+++|||++|+.||...... .+... ...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~----i~~~~ 232 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGK----IREGK 232 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH----HHHTC
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-----HHHHH----Hhhcc
Confidence 9875432 1678899999999999999999999853221 11111 11121
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
... +. ...++++.+++. +||+.||++|||+.||++.+.
T Consensus 233 ~~~-----~~-~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 233 FRR-----IP-YRYSDELNEIIT---RMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCC-----CC-TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHTSTT
T ss_pred ccc-----CC-cccCHHHHHHHH---HHcCCCcccCCCHHHHHhChh
Confidence 111 11 122344455555 999999999999999987654
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=291.13 Aligned_cols=223 Identities=20% Similarity=0.273 Sum_probs=166.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--CCC--EEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--DGS--MLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--~~~--~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni----------~~~l 341 (538)
++|...+.||+|+||.||+|... +++ .||+|.++... ...+++.+|++++++++|||| ..++
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 97 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence 46788899999999999999852 333 68999987532 234678999999999999999 3359
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|+||+++|+|.+++.... ..+++..+.+++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 98 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999998643 258999999999999999999999 9999999999999999999999999999875432
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
. ++.++||||||+++|||++ |+.||..... ..............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKEGERL- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTSCCCC-
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHccCCCC-
Confidence 1 4668999999999999999 9999975332 11222221111100
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. .....+.++ .+++.+||+.||++|||+.++++.|+++...
T Consensus 245 ----~-~~~~~~~~l---~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 ----P-RPEDCPQDI---YNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ----C-CCTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ----C-CCcCcCHHH---HHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0 011223344 4455599999999999999999999987654
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=292.34 Aligned_cols=227 Identities=19% Similarity=0.288 Sum_probs=164.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+++++.++||||+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35688889999999999999995 569999999996432 2246688999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.|+||||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 27999999 78999999874 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH-------HHHHHHHhcc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL-------VNWIDQLSSS 469 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~ 469 (538)
.... .++.++||||+||++|||++|+.||......+.....+ ..+... ...
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~-~~~ 255 (367)
T 1cm8_A 177 QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR-LQS 255 (367)
T ss_dssp ECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT-CSC
T ss_pred ccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH-hhh
Confidence 5432 27889999999999999999999998643321100000 000000 000
Q ss_pred CC-------cccccccccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 470 GR-------IKDVIDKALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 470 ~~-------~~~~~d~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. +.......+. ....+.++.++++ +|++.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~---~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLE---KMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH---HHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH---HHccCChhHCCCHHHHhcC
Confidence 00 0000000000 0112344555555 9999999999999999873
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=280.54 Aligned_cols=224 Identities=17% Similarity=0.273 Sum_probs=174.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-------ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-------LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|... +++.||+|.++... ...+.+.+|++++++++|||| ..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45788899999999999999965 68999999986432 135789999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFS 416 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a 416 (538)
+||||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999997654 59999999999999999999999 9999999999999999877 8999999999
Q ss_pred cccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
..... .++.++||||||+++|||++|+.||...... ....... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~- 229 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--------ETLTNIS-AVNYD- 229 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHH-TTCCC-
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--------HHHHHhH-hcccC-
Confidence 75432 2678999999999999999999999753321 1111111 11100
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HHHHhHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI--SLCSIAEQ 523 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~~i~~~ 523 (538)
.+.... ...++.+. +++.+||+.||++|||+.|+++ .++++..+
T Consensus 230 -~~~~~~-~~~~~~~~---~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 230 -FDEEYF-SNTSELAK---DFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp -CCHHHH-TTCCHHHH---HHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred -Ccchhc-ccCCHHHH---HHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 000000 11223444 4555999999999999999997 46665544
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-35 Score=299.53 Aligned_cols=214 Identities=15% Similarity=0.203 Sum_probs=165.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCC--CCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK--HPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--H~ni-----------~~~lv~ 343 (538)
.+|...+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++.+++ |||| ..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3588889999999999999998789999999996533 23467899999999996 5998 236899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
| +.+|+|.+++.... .+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56789999998765 68999999999999999999999 9999999999999996 57999999999975421
Q ss_pred ----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 422 ----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 422 ----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
.++.++|||||||++|||++|+.||..... ....+....
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~~~~ 281 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHAII 281 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHHHHh
Confidence 146689999999999999999999975321 111122222
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..... ... ....+.++.++ +.+||+.||++|||+.|+++.
T Consensus 282 ~~~~~-----~~~-~~~~~~~~~~l---i~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 DPNHE-----IEF-PDIPEKDLQDV---LKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CTTSC-----CCC-CCCSCHHHHHH---HHHHTCSSTTTSCCHHHHHTS
T ss_pred Ccccc-----CCC-CccchHHHHHH---HHHHcccChhhCCCHHHHhhC
Confidence 11110 000 11223344444 449999999999999999864
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=307.28 Aligned_cols=220 Identities=20% Similarity=0.237 Sum_probs=174.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...++||+|+||.||+|... +|+.||+|++... ......+.+|++++++++|||| ..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999964 6999999999643 2345668899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
|||+++|+|.+++...+...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999987665569999999999999999999999 99999999999999999999999999999865321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++|||||||++|||++|+.||....... ...... ....... ..+
T Consensus 340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~-~~i~~~~------~~~ 408 (576)
T 2acx_A 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVE-RLVKEVP------EEY 408 (576)
T ss_dssp CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHH-HHHHHCC------CCC
T ss_pred ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----hHHHHH-HHhhccc------ccC
Confidence 6788999999999999999999998643211 111111 1111110 011
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
....+.++..+++ +||+.||.+|| ++.||++.
T Consensus 409 -p~~~s~~~~dLI~---~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 409 -SERFSPQARSLCS---QLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -CTTSCHHHHHHHH---HHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -CccCCHHHHHHHH---HhccCCHHHcCCCCCCCHHHHHhC
Confidence 1223445566665 99999999999 78888753
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=288.02 Aligned_cols=225 Identities=18% Similarity=0.205 Sum_probs=166.8
Q ss_pred cCCCC-CCeEeecCCceEEEEE-eCCCCEEEEEEccccc-ccHHHHHHHHHHHhcC-CCCCC-----------cccEEEe
Q 040267 280 SNFSA-QNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~-~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e 344 (538)
+.|.. .+.||+|+||.||+|. ..+++.||||+++... ...+.+.+|++++.++ +|||| ..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45666 4789999999999999 4579999999997543 3467899999999985 79999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~~ 421 (538)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++.....
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999998754 58999999999999999999999 99999999999999998766 99999999874320
Q ss_pred -----------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccc------cHH
Q 040267 422 -----------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG------NLV 460 (538)
Q Consensus 422 -----------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~------~~~ 460 (538)
.++.++|||||||++|||++|+.||......+.... ...
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 046789999999999999999999986443221100 000
Q ss_pred HHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 461 NWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+......+... ...... ...+.++. +++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~i~~~~~~-~~~~~~--~~~~~~~~---~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 247 NMLFESIQEGKYE-FPDKDW--AHISCAAK---DLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHCCCC-CCHHHH--TTSCHHHH---HHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhccCcc-cCchhc--ccCCHHHH---HHHHHHhhCChhhCCCHHHHhc
Confidence 0111111111110 000000 11223444 4555999999999999999987
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=302.49 Aligned_cols=164 Identities=22% Similarity=0.265 Sum_probs=139.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|+.+++.++||||+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 45788899999999999999984 468999999997532 2346788999999999999992
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.|+||||+++ +|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 2799999976 57776653 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||.+..
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp ----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432 17889999999999999999999998643
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=292.10 Aligned_cols=224 Identities=17% Similarity=0.182 Sum_probs=169.6
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc------cccHHHHHHHHHHHhcCCCCCCc--------
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC------KLGEKQFLLEMKQVGLLKHPNLE-------- 338 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~H~ni~-------- 338 (538)
++....++|...+.||+|+||.||+|.. .++..||+|.+... ....+.+.+|++++++++||||+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3445667899999999999999999995 46889999998643 23346799999999999999993
Q ss_pred ---ccEEEeecCCCCHHHHhhcCC--------------------------------------CCCCCHHHHHHHHHHHHH
Q 040267 339 ---KPLVYKYMSNGTLYSLLHSNG--------------------------------------NTALDWPSRLRIGLGAAR 377 (538)
Q Consensus 339 ---~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~ia~ 377 (538)
.++||||+++|+|.+++.... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 369999999999999985210 112356778899999999
Q ss_pred HHHHHhcCCCCCccccCCCCCCeeeCCCC--CeEEEeccCCcccC-----------------------------CCCCCc
Q 040267 378 GLSWLHHCCHPPCLHQNISSSVILVDEDF--DARIMDFGFSRLTN-----------------------------GDASLQ 426 (538)
Q Consensus 378 ~L~yLH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~-----------------------------~~~~~~ 426 (538)
||+|||+ .+|+||||||+||+++.++ .+||+|||+++... ..++.+
T Consensus 180 ~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 9999999 9999999999999998776 89999999987421 126779
Q ss_pred cCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCC
Q 040267 427 KDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKE 506 (538)
Q Consensus 427 ~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~ 506 (538)
+||||||+++|||++|+.||...... ........... ....+.. ...+.++.++++ +||+.||++
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~--~~~~~~~--~~~~~~~~~li~---~~l~~~p~~ 321 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKL--CFENPNY--NVLSPLARDLLS---NLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC--CTTSGGG--GGSCHHHHHHHH---HHSCSCTTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhccc--ccCCccc--ccCCHHHHHHHH---HHcCCChhH
Confidence 99999999999999999999754321 11111111110 0000100 012334455555 999999999
Q ss_pred CCCHHHHHH
Q 040267 507 KWSMYQVYI 515 (538)
Q Consensus 507 RPs~~evl~ 515 (538)
|||+.|+++
T Consensus 322 Rps~~~~l~ 330 (345)
T 3hko_A 322 RFDAMRALQ 330 (345)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHhc
Confidence 999999987
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=297.68 Aligned_cols=218 Identities=18% Similarity=0.241 Sum_probs=170.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
.++|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++.++ +||||
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999996 368999999997532 2345677899999999 69999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 3359999999999999998755 59999999999999999999999 999999999999999999999999999987
Q ss_pred ccCC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 418 LTNG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 418 ~~~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.... .++.++|||||||++|||++|+.||...... ..............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSE- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCC-
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhccC-
Confidence 4311 1567899999999999999999999753321 12222222221110
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYIS 516 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 516 (538)
+... ...+..+.+ ++.+||+.||.+|| |+.|+++.
T Consensus 283 ------~~~~-~~~~~~~~~---li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 ------PPYP-QEMSALAKD---LIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ------CCCC-TTSCHHHHH---HHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CCCC-cccCHHHHH---HHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1111 112334444 44599999999999 99999875
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=300.44 Aligned_cols=158 Identities=19% Similarity=0.299 Sum_probs=129.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|++++++++||||+
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36799999999999999999985 468999999996532 2346788999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+||||+. |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeccc-cchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchh
Confidence 379999985 69999998754 69999999999999999999999 9999999999999999999999999999975
Q ss_pred cC---------------------------------------------------CCCCCccCcccHHHHHHHHHhC
Q 040267 419 TN---------------------------------------------------GDASLQKDVHGFGVVLLELVTG 442 (538)
Q Consensus 419 ~~---------------------------------------------------~~~~~~~DV~S~Gvvl~elltg 442 (538)
.. ..++.++|||||||++|||+||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32 1178899999999999999993
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=291.19 Aligned_cols=232 Identities=18% Similarity=0.242 Sum_probs=168.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|...+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++|||| ..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46778899999999999999964 589999999865332 23557899999999999999 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 105 FVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999998876554 59999999999999999999999 9999999999999999999999999999864321
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH-------HHHHHHHhccCCcc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL-------VNWIDQLSSSGRIK 473 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 473 (538)
.++.++||||||+++|||++|+.||......+...... ..+...........
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 26788999999999999999999998644321110000 00000000000011
Q ss_pred ccccccccCCCcH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 474 DVIDKALTGKGYD-----DEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 474 ~~~d~~l~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.+...... .....+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111111100 112334555559999999999999999863
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-35 Score=285.15 Aligned_cols=216 Identities=19% Similarity=0.280 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.+++.++|||| ..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356888899999999999999964 68999999986433 334678999999999999999 3369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+.....
T Consensus 86 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999997654 58999999999999999999999 9999999999999999999999999999864310
Q ss_pred ----------------------C-CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 ----------------------D-ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ----------------------~-~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. .+.++||||||+++|||++|+.||....... .....|.. .... ..+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~----~~~~---~~~ 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKE----KKTY---LNP 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS---HHHHHHHT----TCTT---STT
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHhhh----cccc---cCc
Confidence 0 3568999999999999999999997543211 11122211 1000 000
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....+..+.+ ++.+||+.||++|||+.|+++
T Consensus 231 ---~~~~~~~~~~---li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 ---WKKIDSAPLA---LLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ---GGGSCHHHHH---HHHHHSCSSTTTSCCHHHHTT
T ss_pred ---hhhcCHHHHH---HHHHHCCCCchhCCCHHHHhc
Confidence 0112334444 445999999999999999876
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=280.09 Aligned_cols=215 Identities=20% Similarity=0.274 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCCCCC-------------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKHPNL-------------EK 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H~ni-------------~~ 339 (538)
.++|...+.||+|+||.||+|.. .+++.||+|.++... ...+.+.+|++++++++|||| ..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46799999999999999999995 468999999997532 234679999999999999999 23
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||+++| |.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 6999999876 8888876555579999999999999999999999 99999999999999999999999999999754
Q ss_pred CCC---------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 420 NGD---------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 420 ~~~---------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
... .+.++||||||+++|||++|+.||..... ........ .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~-~~~~ 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--------YKLFENIG-KGSY 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHH-HCCC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHHHh-cCCC
Confidence 310 25689999999999999999999985322 11111111 1111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+.. ..+..+.++++ +||+.||++|||+.|+++.
T Consensus 231 ------~~~~-~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ------AIPG-DCGPPLSDLLK---GMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ------CCCS-SSCHHHHHHHH---HHTCSSTTTSCCHHHHHHS
T ss_pred ------CCCC-ccCHHHHHHHH---HHccCChhhCCCHHHHhcC
Confidence 1111 12334444444 9999999999999999974
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=288.33 Aligned_cols=214 Identities=18% Similarity=0.302 Sum_probs=170.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
+.|...+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.++++++|||| ..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4577889999999999999985 468999999996432 345789999999999999999 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEPG---PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp CTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 9999999999754 59999999999999999999999 9999999999999999999999999999864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... .....+ ..... +.+..
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~----~~~~~-----~~~~~ 241 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFLI----PKNNP-----PTLEG 241 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHH----HHSCC-----CCCCS
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHHh----hcCCC-----CCCcc
Confidence 1578999999999999999999999753221 111111 11111 11111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISL 517 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 517 (538)
..+..+..++ .+||+.||++|||+.|+++..
T Consensus 242 -~~~~~l~~li---~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 -NYSKPLKEFV---EACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -SCCHHHHHHH---HHHCCSSGGGSCCHHHHTTCH
T ss_pred -ccCHHHHHHH---HHHcCCChhhCcCHHHHhhCh
Confidence 2233444444 499999999999999998753
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=288.51 Aligned_cols=229 Identities=21% Similarity=0.301 Sum_probs=164.7
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc------HHHHHHHHHHHhcCCCCCC-----------
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG------EKQFLLEMKQVGLLKHPNL----------- 337 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~H~ni----------- 337 (538)
....++|...+.||+|+||.||+|.. .+|+.||||.++..... .+.+.+|++++++++||||
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 34456899999999999999999995 46899999999743211 2468899999999999999
Q ss_pred cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred ceEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 34699999986 8999887654 368999999999999999999999 999999999999999999999999999987
Q ss_pred ccCC------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc--cCC
Q 040267 418 LTNG------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS--SGR 471 (538)
Q Consensus 418 ~~~~------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 471 (538)
.... .++.++|||||||++|||++|..||......+ .+......... ...
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~----~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD----QLTRIFETLGTPTEEQ 236 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCTTT
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHcCCCChhh
Confidence 5421 15678999999999999999999997643221 11111111100 001
Q ss_pred cccc---ccc----cccC-------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 472 IKDV---IDK----ALTG-------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 472 ~~~~---~d~----~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.+. .+. .... ...++++ .+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDL---LDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHH---HHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHH---HHHHHHHhccChhhCCCHHHHhcC
Confidence 1100 000 0000 1112344 445559999999999999999874
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=289.15 Aligned_cols=159 Identities=17% Similarity=0.301 Sum_probs=141.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC-------------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL-------------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni-------------~~~lv~e 344 (538)
++|...+.||+|+||.||+|.. .+++.||||.++.. ..+.+.+|++++++++ |||| ..++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 5688889999999999999984 57899999999743 3577999999999997 9999 2369999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTNG-- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~-- 421 (538)
|+++++|.+++.. +++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++....
T Consensus 114 ~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 114 HVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp CCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred ccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 9999999999863 8899999999999999999999 9999999999999999776 899999999975331
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
.++.++|||||||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 167899999999999999999999964
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=279.35 Aligned_cols=213 Identities=19% Similarity=0.332 Sum_probs=170.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+.+++.++|||| ..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46888899999999999999965 69999999986432 334678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999998765 58999999999999999999999 99999999999999999999999999998754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.+.++||||||+++|||++|+.||..... ....... ..+.. .+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~------~~ 230 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKKI-RGGVF------YI 230 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH-HHCCC------CC
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHHh-hcCcc------cC
Confidence 25689999999999999999999975322 1111111 11110 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++..+ +.+|++.||++|||+.|+++.
T Consensus 231 -~~~~~~~l~~l---i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 -PEYLNRSVATL---LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -CTTSCHHHHHH---HHHHTCSSGGGSCCHHHHHHS
T ss_pred -chhcCHHHHHH---HHHHccCChhhCCCHHHHHhC
Confidence 11223344444 449999999999999999874
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=300.80 Aligned_cols=214 Identities=21% Similarity=0.273 Sum_probs=162.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|.. .+|+.||||.++.. ......+.+|+++++.++|||| ..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45788899999999999999995 56899999999743 2233567889999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999998755 69999999999999999999995 26899999999999999999999999999975321
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++|||||||++|||++|+.||...... ........ ... .
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~-~~~------~ 367 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILM-EEI------R 367 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC------C
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHh-CCC------C
Confidence 1788999999999999999999999753321 11111111 111 0
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
+ ....+.++.+++. +||+.||++|| |+.|+++
T Consensus 368 ~-p~~~~~~~~~li~---~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 F-PRTLGPEAKSLLS---GLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C-CTTSCHHHHHHHH---HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C-CccCCHHHHHHHH---HHcccCHHHhCCCCCCCHHHHHh
Confidence 1 1122345555555 99999999999 9999986
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=293.74 Aligned_cols=166 Identities=21% Similarity=0.336 Sum_probs=137.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCC-CCCC-------------cc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK-HPNL-------------EK 339 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-H~ni-------------~~ 339 (538)
..++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+.++.++. |||| ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 356788999999999999999995 568999999986432 33456889999999997 9999 23
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 79999998 5999999874 48999999999999999999999 99999999999999999999999999999743
Q ss_pred C---------------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 420 N---------------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 420 ~---------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. ..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 127889999999999999999999998643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=290.63 Aligned_cols=223 Identities=20% Similarity=0.314 Sum_probs=167.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc--HHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG--EKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|... +++.||+|+++..... ...+.+|++++++++|||| ..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46788899999999999999964 6899999999753321 1245679999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC-----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN----- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 420 (538)
++ |+|.+++...+ ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 97 59999988754 368999999999999999999999 999999999999999999999999999986432
Q ss_pred -------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---CCccccccc
Q 040267 421 -------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS---GRIKDVIDK 478 (538)
Q Consensus 421 -------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~ 478 (538)
..++.++|||||||++|||++|+.||......+ ....+...... ..+......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-----QLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHhCCCChHhchhhhcc
Confidence 126889999999999999999999998643321 11222111111 011111100
Q ss_pred ---------ccc-------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ---------ALT-------GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ---------~l~-------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
... ....+.++. +++.+|++.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGA---DLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHH---HHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHH---HHHHHHcCcCcccCCCHHHHhc
Confidence 000 011223444 4555999999999999999987
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=289.13 Aligned_cols=222 Identities=18% Similarity=0.281 Sum_probs=172.0
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccc---------cHHHHHHHHHHHhcC-CCCCC-----
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKL---------GEKQFLLEMKQVGLL-KHPNL----- 337 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l-~H~ni----- 337 (538)
......++|...+.||+|+||.||+|... +|+.||||+++.... ..+.+.+|+.++.++ +||||
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33445667999999999999999999974 699999999864321 135678999999999 79999
Q ss_pred ------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEE
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIM 411 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 411 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEE
Confidence 3469999999999999998654 59999999999999999999999 999999999999999999999999
Q ss_pred eccCCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHH
Q 040267 412 DFGFSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWI 463 (538)
Q Consensus 412 Dfg~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 463 (538)
|||++..... .++.++|||||||++|||++|+.||...... .. .
T Consensus 243 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-----~~---~ 314 (365)
T 2y7j_A 243 DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-----LM---L 314 (365)
T ss_dssp CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH---H
T ss_pred ecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-----HH---H
Confidence 9999875432 1467899999999999999999999753221 11 1
Q ss_pred HHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.. ...+... ...+.. ...+..+. +++.+||+.||++|||+.|+++
T Consensus 315 ~~-i~~~~~~-~~~~~~--~~~~~~~~---~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 RM-IMEGQYQ-FSSPEW--DDRSSTVK---DLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH-HHHTCCC-CCHHHH--SSSCHHHH---HHHHHHSCSSTTTSCCHHHHHH
T ss_pred HH-HHhCCCC-CCCccc--ccCCHHHH---HHHHHHcCCChhHCcCHHHHhc
Confidence 11 1111110 000000 11223344 4555999999999999999986
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=293.38 Aligned_cols=166 Identities=22% Similarity=0.340 Sum_probs=145.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||.||+|... ++..||+|.++... ...+.+.+|++++++++|||| ..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46888899999999999999964 68999999997542 234678999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTN---- 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~---- 420 (538)
+++|+|.+++...+ .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 187 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccc
Confidence 99999999998765 58999999999999999999998 6 89999999999999999999999999986321
Q ss_pred -----------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 421 -----------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 421 -----------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
..++.++||||||+++|||++|+.||....
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 127889999999999999999999997543
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-35 Score=286.31 Aligned_cols=213 Identities=18% Similarity=0.255 Sum_probs=166.6
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc---cccHHHHHHHHHHHhcC-CCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC---KLGEKQFLLEMKQVGLL-KHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv 342 (538)
.++|...+.||+|+||.||+|... +++.||+|.++.. .....++.+|+..+..+ +|||| ..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888899999999999999965 7999999999753 23356788999999999 89999 33589
Q ss_pred EeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----------------
Q 040267 343 YKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---------------- 404 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---------------- 404 (538)
|||+++|+|.+++.... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999998642 1368999999999999999999999 99999999999999984
Q ss_pred ---CCCeEEEeccCCcccCCC--------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHH
Q 040267 405 ---DFDARIMDFGFSRLTNGD--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN 461 (538)
Q Consensus 405 ---~~~~kl~Dfg~a~~~~~~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 461 (538)
...+||+|||.+...... ++.++||||||+++|||++|..|+.... ...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~ 238 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------QWH 238 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------HHH
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------HHH
Confidence 447999999998765421 4468999999999999999998765321 111
Q ss_pred HHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ...+... .+. ...+.++.++++ +||+.||++|||+.|+++
T Consensus 239 ---~-~~~~~~~-----~~~-~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 239 ---E-IRQGRLP-----RIP-QVLSQEFTELLK---VMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---H-HHTTCCC-----CCS-SCCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred ---H-HHcCCCC-----CCC-cccCHHHHHHHH---HHhCCCcccCCCHHHHhh
Confidence 1 1111111 111 122345555555 999999999999999975
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=315.74 Aligned_cols=225 Identities=21% Similarity=0.339 Sum_probs=177.9
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPL 341 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~l 341 (538)
..++|...+.||+|+||.||+|.... +..||+|.++... ...+.+.+|+.++++++|||| ..++
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~l 467 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEE
Confidence 34567888999999999999998632 4579999987533 234679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 468 v~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999998654 358999999999999999999999 9999999999999999999999999999986532
Q ss_pred C------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 422 D------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 422 ~------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
. ++.++||||||+++|||++ |..||...... .+...+ .. +....
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~i---~~-~~~~~-- 612 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRI---EN-GERLP-- 612 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHH---HH-TCCCC--
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHH---Hc-CCCCC--
Confidence 1 6778999999999999997 99999753321 111111 11 11000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
. ....+..+. +++.+||+.||++|||+.||++.|+++.++.
T Consensus 613 ---~-~~~~~~~l~---~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 ---M-PPNCPPTLY---SLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ---C-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---C-CccccHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1 111233444 4555999999999999999999999987653
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=298.29 Aligned_cols=168 Identities=20% Similarity=0.247 Sum_probs=145.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC------CCCCC-----------ccc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL------KHPNL-----------EKP 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l------~H~ni-----------~~~ 340 (538)
..+|...+.||+|+||.||+|.. .+++.||||+++......+++.+|+++++.+ .|+|| ..+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 34688889999999999999985 4588999999987655556788899888887 45677 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC--eEEEeccCCcc
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD--ARIMDFGFSRL 418 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 418 (538)
+||||+. |+|.+++.......+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999996 699999988765569999999999999999999999 99999999999999999887 99999999865
Q ss_pred cCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 419 TNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 419 ~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
... .++.++|||||||++|||+||+.||....
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 252 EHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 432 17889999999999999999999998644
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=288.70 Aligned_cols=168 Identities=20% Similarity=0.283 Sum_probs=140.6
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------ccE
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-----------KPL 341 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-----------~~l 341 (538)
...++|...+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++||||+ .++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 4456799999999999999999984 4689999999975432 235678999999999999993 369
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee-----CCCCCeEEEeccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV-----DEDFDARIMDFGFS 416 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~Dfg~a 416 (538)
||||++ |+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+||+|||++
T Consensus 111 v~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 999998 59999998766 59999999999999999999999 999999999999999 45556999999998
Q ss_pred cccC------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 417 RLTN------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 417 ~~~~------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+... ..++.++|||||||++|||++|+.||....
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 242 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence 6432 116889999999999999999999997643
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-34 Score=279.72 Aligned_cols=213 Identities=21% Similarity=0.282 Sum_probs=170.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++|||| ..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999964 57899999986432 234678999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999998765 58999999999999999999999 9999999999999999999999999998864322
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... ........ .. ..+.
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~-~~------~~~~- 232 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRRIVN-VD------LKFP- 232 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHT-TC------CCCC-
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------HHHHHHhc-cc------cCCC-
Confidence 1678999999999999999999999753221 11111111 11 0111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...+.++.++++ +|++.||.+|||+.|+++.
T Consensus 233 ~~~~~~~~~li~---~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 233 PFLSDGSKDLIS---KLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp TTSCHHHHHHHH---HHSCSSGGGSCCHHHHHTC
T ss_pred CcCCHHHHHHHH---HHhhcCHhhCCCHHHHhhC
Confidence 122345555555 9999999999999999863
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=293.11 Aligned_cols=214 Identities=20% Similarity=0.257 Sum_probs=161.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHH-HhcCCCCCC-----------cccE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQ-VGLLKHPNL-----------EKPL 341 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~-l~~l~H~ni-----------~~~l 341 (538)
.++|...+.||+|+||.||+|+.. +++.||+|++++.. .....+.+|..+ ++.++|||| ..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357888999999999999999964 58899999997543 223456677776 577899999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999998755 58999999999999999999999 9999999999999999999999999999975211
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||++|+.||...... +....... +..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~-~~~------ 256 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILN-KPL------ 256 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--------HHHHHHHH-SCC------
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHh-ccc------
Confidence 1678999999999999999999999754321 11111111 111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+ ....+.++..+++ +||+.||.+||++.+.++.
T Consensus 257 ~~-~~~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 257 QL-KPNITNSARHLLE---GLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp CC-CSSSCHHHHHHHH---HHTCSSGGGSTTTTTTHHH
T ss_pred CC-CCCCCHHHHHHHH---HHcccCHHhCCCCCCCHHH
Confidence 01 1123345555555 9999999999998644433
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=301.66 Aligned_cols=217 Identities=22% Similarity=0.294 Sum_probs=171.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||||++... ....+.+.+|++++++++||||+ .++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46888899999999999999964 7899999998643 23467899999999999999993 46999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 106 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp CCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999998765 59999999999999999999999 999999999999999 467899999999987543
Q ss_pred C---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 G---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .++.++||||+||++|||++|+.||...... .+...+ ..+..... .+.
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~i----~~~~~~~~-~~~ 250 (484)
T 3nyv_A 181 ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY-----DILKKV----EKGKYTFE-LPQ 250 (484)
T ss_dssp CCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH----HHCCCCCC-SGG
T ss_pred cccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHH----HcCCCCCC-Ccc
Confidence 2 1788999999999999999999999864321 111111 11111100 000
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ...++++..+++ +||+.||++|||+.|+++.
T Consensus 251 ~--~~~s~~~~~li~---~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 251 W--KKVSESAKDLIR---KMLTYVPSMRISARDALDH 282 (484)
T ss_dssp G--GGSCHHHHHHHH---HHTCSSGGGSCCHHHHHTS
T ss_pred c--ccCCHHHHHHHH---HHCCCChhHCcCHHHHhhC
Confidence 0 112345555555 9999999999999999863
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=282.32 Aligned_cols=216 Identities=19% Similarity=0.245 Sum_probs=165.6
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeecC
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYMS 347 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~~ 347 (538)
.|....+||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.+++.++||||+ .++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345556999999999999995 568899999997543 3356799999999999999993 359999999
Q ss_pred CCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-CCCeEEEeccCCcccCCC---
Q 040267 348 NGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-DFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 348 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~--- 422 (538)
+++|.+++.... ...+++..+..++.|++.||+|||+ .+|+|+||||+||+++. ++.+||+|||++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 999999998753 3357789999999999999999999 99999999999999987 899999999998754320
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||||+++|||++|+.||....... ......... . ..+.+
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~-----~~~~~ 247 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ------AAMFKVGMF-K-----VHPEI 247 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH------HHHHHHHHH-C-----CCCCC
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh------HHHHhhccc-c-----ccccc
Confidence 5678999999999999999999997422110 011110000 0 01111
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ...+.++..++ .+||+.||++|||+.|+++
T Consensus 248 ~-~~~~~~~~~li---~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 P-ESMSAEAKAFI---LKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp C-TTSCHHHHHHH---HHTTCSSTTTSCCHHHHHT
T ss_pred c-ccCCHHHHHHH---HHHccCChhhCCCHHHHhc
Confidence 1 12233444444 4999999999999999975
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=302.23 Aligned_cols=219 Identities=21% Similarity=0.262 Sum_probs=169.4
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--------------ccHHHHHHHHHHHhcCCCCCC-----
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--------------LGEKQFLLEMKQVGLLKHPNL----- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~H~ni----- 337 (538)
..++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.++++++||||
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3567889999999999999999954 58899999996532 234678999999999999999
Q ss_pred ------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC---Ce
Q 040267 338 ------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF---DA 408 (538)
Q Consensus 338 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~ 408 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccE
Confidence 3469999999999999997755 59999999999999999999999 9999999999999998775 69
Q ss_pred EEEeccCCcccCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHh
Q 040267 409 RIMDFGFSRLTNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467 (538)
Q Consensus 409 kl~Dfg~a~~~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 467 (538)
||+|||+++..... ++.++||||+||++|||++|+.||...... ......
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i- 259 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DIIKKV- 259 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-
Confidence 99999999754321 678999999999999999999999864321 111111
Q ss_pred ccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 468 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
..+.... +... ....+.++.++++ +|++.||.+|||+.|+++.
T Consensus 260 ~~~~~~~--~~~~-~~~~s~~~~~li~---~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYF--DFND-WKNISDEAKELIK---LMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCC--CHHH-HTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCC--Cccc-cCCCCHHHHHHHH---HHcCCChhHCCCHHHHhcC
Confidence 1111100 0000 0112344555555 9999999999999999863
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=285.69 Aligned_cols=218 Identities=20% Similarity=0.278 Sum_probs=167.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCC----------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNL----------E 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni----------~ 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||.+..... ....+.+|++++++++|||| .
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 35688889999999999999995 4588999999864321 12348899999999999999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccC
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGF 415 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~ 415 (538)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 469999999999999997654 69999999999999999999999 99999999999999987654 99999999
Q ss_pred CcccCC-------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC
Q 040267 416 SRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG 470 (538)
Q Consensus 416 a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (538)
++.... .++.++||||||+++|||++|+.||....... .+...+.. +
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~----~ 235 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITS----G 235 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHHHHH----T
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHHHHh----C
Confidence 975432 26779999999999999999999997543221 22222211 1
Q ss_pred CccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 471 RIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 471 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... .+.... ..++. +.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~--~~~~~~-~~~~~---~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYNF--IPEVWA-EVSEK---ALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCC--CHHHHT-TSCHH---HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccc--Cchhhh-hcCHH---HHHHHHHHcccCHhhCCCHHHHhh
Confidence 1100 000001 12234 444555999999999999999985
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=290.39 Aligned_cols=171 Identities=21% Similarity=0.262 Sum_probs=144.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCC-----C-----------cc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPN-----L-----------EK 339 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~n-----i-----------~~ 339 (538)
..++|...+.||+|+||.||+|... +++.||||+++.......++..|++++..++ |++ + ..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 3568899999999999999999954 6889999999865555567888999999885 665 3 34
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC--CCCCeEEEeccCCc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD--EDFDARIMDFGFSR 417 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~a~ 417 (538)
++||||++ |+|.+++.......+++..+..++.|++.||+|||+ ...+|+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 69999996 599999987754569999999999999999999994 127899999999999994 57889999999997
Q ss_pred ccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432 27889999999999999999999998643
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=289.09 Aligned_cols=218 Identities=18% Similarity=0.265 Sum_probs=166.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... +++.||||.++.... ...+|++++.++ +|||| ..|+||||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 456888899999999999999964 688999999975432 245688888888 79999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC----CCeEEEeccCCcccCC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED----FDARIMDFGFSRLTNG 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~ 421 (538)
+++|+|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+|||+.++ +.+||+|||+++....
T Consensus 98 ~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 98 MKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 99999999998765 69999999999999999999999 999999999999998543 3599999999985432
Q ss_pred C-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 D-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 ~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
. ++.++|||||||++|||++|+.||...... ...+.... +..+.... ..
T Consensus 173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~-i~~~~~~~--~~ 244 (342)
T 2qr7_A 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILAR-IGSGKFSL--SG 244 (342)
T ss_dssp TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHH-HHHCCCCC--CS
T ss_pred CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHH-HccCCccc--Cc
Confidence 1 556899999999999999999999753211 11122222 11121110 00
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.. ....++++.++++ +||+.||++|||+.|+++.
T Consensus 245 ~~-~~~~s~~~~~li~---~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 GY-WNSVSDTAKDLVS---KMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TT-TTTSCHHHHHHHH---HHTCSSTTTSCCHHHHTTS
T ss_pred cc-cccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 00 1123445555555 9999999999999999864
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=286.54 Aligned_cols=223 Identities=19% Similarity=0.225 Sum_probs=170.6
Q ss_pred HHHhcCCCCC-CeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCC-CCCC-----------c
Q 040267 276 IAATSNFSAQ-NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK-HPNL-----------E 338 (538)
Q Consensus 276 ~~~~~~f~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-H~ni-----------~ 338 (538)
....+.|... +.||+|+||.||+|... +++.||+|.++... ....++.+|+.++..++ |||| .
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3444556665 78999999999999954 68999999997532 33578999999999995 6999 3
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccC
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGF 415 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~ 415 (538)
.++||||+++|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 3699999999999999976655579999999999999999999999 99999999999999998 78999999999
Q ss_pred CcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 416 SRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 416 a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
++.... .++.++||||||+++|||++|+.||......+ ....... ...
T Consensus 181 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~-~~~- 250 (327)
T 3lm5_A 181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--------TYLNISQ-VNV- 250 (327)
T ss_dssp CEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHH-TCC-
T ss_pred ccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--------HHHHHHh-ccc-
Confidence 975432 16789999999999999999999997533211 1111111 000
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+ .....+..+.+++ .+||+.||++|||++|+++.
T Consensus 251 ~~~~~--~~~~~~~~~~~li---~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 DYSEE--TFSSVSQLATDFI---QSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCCTT--TTTTSCHHHHHHH---HHHSCSSGGGSCCHHHHTTC
T ss_pred ccCch--hhcccCHHHHHHH---HHHcCCChhhCcCHHHHhCC
Confidence 00000 0112233444444 49999999999999999863
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=299.53 Aligned_cols=218 Identities=19% Similarity=0.299 Sum_probs=171.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccc---cccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSAC---KLGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
.++|...+.||+|+||+||+|... +++.||||++... ......+.+|++++++++||||+ .++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 346888899999999999999954 6899999998642 23467899999999999999993 36999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999987655 59999999999999999999999 9999999999999995 45689999999997543
Q ss_pred CC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 GD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.. ++.++||||+||++|||++|+.||...... ...... ..+...... +.
T Consensus 176 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i-~~~~~~~~~-~~ 245 (486)
T 3mwu_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRV-ETGKYAFDL-PQ 245 (486)
T ss_dssp CC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-HHTCCCSCS-GG
T ss_pred CCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-HhCCCCCCC-cc
Confidence 21 678899999999999999999999754321 111111 111111000 00
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ...++++..+++ +||+.||++|||+.|+++.
T Consensus 246 ~--~~~s~~~~~li~---~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 W--RTISDDAKDLIR---KMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G--GGSCHHHHHHHH---HHTCSSTTTSCCHHHHHHC
T ss_pred c--CCCCHHHHHHHH---HHcCCChhhCcCHHHHhcC
Confidence 0 112345555555 9999999999999999874
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=295.69 Aligned_cols=233 Identities=18% Similarity=0.224 Sum_probs=168.4
Q ss_pred HHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 276 IAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 276 ~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
....++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 34567899999999999999999995 5799999999865432 234799999999999992
Q ss_pred ---------------------------------ccEEEeecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh
Q 040267 339 ---------------------------------KPLVYKYMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWLH 383 (538)
Q Consensus 339 ---------------------------------~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~yLH 383 (538)
.++||||++ |+|.+.+.. .....+++..+..++.|++.||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 458999998 588887764 12246999999999999999999999
Q ss_pred cCCCCCccccCCCCCCeeeC-CCCCeEEEeccCCcccCC-----------------------CCCCccCcccHHHHHHHH
Q 040267 384 HCCHPPCLHQNISSSVILVD-EDFDARIMDFGFSRLTNG-----------------------DASLQKDVHGFGVVLLEL 439 (538)
Q Consensus 384 ~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~-----------------------~~~~~~DV~S~Gvvl~el 439 (538)
+ .+|+||||||+||+++ .++.+||+|||+++.... .++.++||||+||++|||
T Consensus 159 ~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 159 S---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp T---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred H---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 9 9999999999999997 688999999999975321 168899999999999999
Q ss_pred HhCCCCCCCCcccccccccHHHHHHHHhc---------cCCcccccccccc--------CCCcHHHHHHHHHHHhHccCC
Q 040267 440 VTGQKPFEINASEEGYKGNLVNWIDQLSS---------SGRIKDVIDKALT--------GKGYDDEILQFLQIACKCVAV 502 (538)
Q Consensus 440 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~~l~--------~~~~~~~~~~l~~l~~~cl~~ 502 (538)
++|+.||......+. +...+...-. .....+..-+... ....+.++. +++.+||+.
T Consensus 236 l~g~~pf~~~~~~~~----~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~L~~ 308 (383)
T 3eb0_A 236 ILGKPLFSGETSIDQ----LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAI---DLLEQILRY 308 (383)
T ss_dssp HHSSCSSCCSSHHHH----HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHH---HHHHHHCCS
T ss_pred HhCCCCCCCCChHHH----HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHH---HHHHHHccC
Confidence 999999986433221 1111110000 0001111001111 111233444 455599999
Q ss_pred CCCCCCCHHHHHH--HHHHhHH
Q 040267 503 RPKEKWSMYQVYI--SLCSIAE 522 (538)
Q Consensus 503 dP~~RPs~~evl~--~L~~i~~ 522 (538)
||++|||+.|+++ .++++..
T Consensus 309 dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 309 EPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp SGGGSCCHHHHHTSGGGHHHHH
T ss_pred ChhhCCCHHHHhcCHHHHHHHh
Confidence 9999999999985 3454443
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=282.36 Aligned_cols=216 Identities=23% Similarity=0.316 Sum_probs=167.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCcc------------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK------------------ 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~~------------------ 339 (538)
.++|...+.||+|+||.||+|+. .+++.||||.++......+.+.+|+.++++++||||.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45688889999999999999995 47999999999765555577899999999999999932
Q ss_pred ------cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEec
Q 040267 340 ------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDF 413 (538)
Q Consensus 340 ------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 413 (538)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeC
Confidence 58999999999999998654 357889999999999999999999 99999999999999999999999999
Q ss_pred cCCcccC--------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccc
Q 040267 414 GFSRLTN--------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGY 455 (538)
Q Consensus 414 g~a~~~~--------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~ 455 (538)
|++.... ..++.++||||||+++|||++ ||....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~----- 232 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM----- 232 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----
Confidence 9987542 126788999999999999998 554211
Q ss_pred cccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 456 KGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
........... .. ....+.+. ...+..+. +++.+||+.||++|||+.|+++
T Consensus 233 --~~~~~~~~~~~-~~--~~~~~~~~-~~~~~~~~---~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 --ERVNILKKLRS-VS--IEFPPDFD-DNKMKVEK---KIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp --HHHHHHHHHHS-TT--CCCCTTCC-TTTSHHHH---HHHHHHTCSSGGGSCCHHHHHH
T ss_pred --hHHHHHHhccc-cc--cccCcccc-ccchHHHH---HHHHHHHhcCcccCcCHHHHhC
Confidence 11111111111 10 00111111 11223344 4555999999999999999986
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=303.02 Aligned_cols=219 Identities=17% Similarity=0.269 Sum_probs=171.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
.++|...++||+|+||.||+|+.. +|+.||+|++.+.. ...+.+.+|++++++++|||| ..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357888899999999999999964 69999999996532 334678899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 3469999999999999999999999 999999999999999999999999999997532
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++|||||||++|||+||+.||....... ........... ...
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~----~~~~~~~~i~~-~~~----- 410 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRVLE-QAV----- 410 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC----CHHHHHHHHHH-CCC-----
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch----hHHHHHHHHhh-ccc-----
Confidence 1 16789999999999999999999998643211 11122222111 110
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSM-----YQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 515 (538)
.. ....+.++..+++ +||+.||++||++ .+|++
T Consensus 411 -~~-p~~~s~~~~~li~---~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 411 -TY-PDKFSPASKDFCE---ALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -CC-CTTSCHHHHHHHH---HHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -CC-CcccCHHHHHHHH---HhccCCHhHCCCCcccCHHHHHc
Confidence 01 1223445555555 9999999999975 56654
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=280.76 Aligned_cols=213 Identities=16% Similarity=0.241 Sum_probs=170.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.+++.++|||| ..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 46778899999999999999965 58899999986532 234668899999999999999 246999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp ECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999987654 59999999999999999999999 9999999999999999999999999999875431
Q ss_pred ---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 422 ---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 422 ---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
.++.++||||||+++|||++|+.||...... +....... ... .+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~------~~ 234 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKK-NEY------SI 234 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHT-TCC------CC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhh-ccC------CC
Confidence 1567899999999999999999999753321 11111111 110 01
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....+.++.++++ +||+.||++|||+.|+++.
T Consensus 235 -~~~~~~~~~~li~---~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 -PKHINPVAASLIQ---KMLQTDPTARPTINELLND 266 (294)
T ss_dssp -CTTSCHHHHHHHH---HHTCSSGGGSCCGGGGGGS
T ss_pred -ccccCHHHHHHHH---HHcccChhhCcCHHHHhhC
Confidence 1122334444444 9999999999999999874
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-34 Score=286.57 Aligned_cols=214 Identities=16% Similarity=0.240 Sum_probs=170.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
..+|...+.||+|+||.||++... +++.||+|.+.... ...+.+.+|+.+++.++|||| ..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356888899999999999999964 58899999986532 234678899999999999999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
|||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999988654 59999999999999999999999 9999999999999999999999999999975431
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++||||||+++|||++|+.||...... ........ ... .
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~-~~~------~ 259 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKK-NEY------S 259 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-TCC------C
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHhc-CCC------C
Confidence 1567899999999999999999999753221 11111111 110 0
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+ ....+.++.++++ +||+.||++|||+.|+++.
T Consensus 260 ~-~~~~~~~~~~li~---~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 I-PKHINPVAASLIQ---KMLQTDPTARPTINELLND 292 (335)
T ss_dssp C-CTTSCHHHHHHHH---HHTCSSGGGSCCGGGGGGS
T ss_pred C-CccCCHHHHHHHH---HHccCChhHCcCHHHHhcC
Confidence 1 1122334444554 9999999999999999874
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=281.06 Aligned_cols=216 Identities=18% Similarity=0.302 Sum_probs=168.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|+.. +|+.||+|.++... ...+.+.+|+.++++++|||| ..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 46788899999999999999954 68999999997543 234568899999999999999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee---CCCCCeEEEeccCCcccCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV---DEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~-- 421 (538)
++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++....
T Consensus 89 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 89 SGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred CCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 9999999997655 58999999999999999999999 999999999999999 7889999999999875432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... ....... .+... . .... .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~-~~~~~-~-~~~~-~ 231 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIK-EGYYE-F-ESPF-W 231 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHH-HCCCC-C-CTTT-T
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHH-cCCCC-C-Cccc-c
Confidence 1677999999999999999999999753321 1111111 11110 0 0001 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++.+++. +|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 232 DDISESAKDFIC---HLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTSCHHHHHHHH---HHHCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 122344455555 999999999999999986
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=288.65 Aligned_cols=166 Identities=23% Similarity=0.331 Sum_probs=144.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------------K 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------------~ 339 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++.+++||||+ .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 45788899999999999999995 468899999997533 2236788999999999999992 3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||++ |+|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 69999997 5999999865 49999999999999999999999 99999999999999999999999999998743
Q ss_pred CC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcc
Q 040267 420 NG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINAS 451 (538)
Q Consensus 420 ~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~ 451 (538)
.. .++.++|||||||++|||++|+.||.....
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 237 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence 21 168899999999999999999999986443
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.63 Aligned_cols=163 Identities=19% Similarity=0.251 Sum_probs=141.3
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||+++... ...+++.+|++++++++||||+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 45788899999999999999995 468899999997532 2346789999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+||||++ |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 379999997 59999998754 69999999999999999999999 9999999999999999999999999999974
Q ss_pred cC----------------------------------------------CCCCCccCcccHHHHHHHHHhCCCCCC
Q 040267 419 TN----------------------------------------------GDASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 419 ~~----------------------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
.. ..++.++|||||||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 31 117889999999999999998666554
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=279.76 Aligned_cols=217 Identities=17% Similarity=0.250 Sum_probs=168.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
.++|...+.||+|+||.||+|... +++.||+|.+.... ...+++.+|++++++++|||| ..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 456888899999999999999965 58999999987533 445789999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc------
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT------ 419 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~------ 419 (538)
+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 99999999987633 259999999999999999999999 99999999999999999999999999986411
Q ss_pred ----------------------CCCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 420 ----------------------NGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 420 ----------------------~~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
...++.++||||||+++|||++|+.||...... .......... .....
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~- 243 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSD-PPTLL- 243 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSC-CCCCS-
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--------HHHHHHhccC-CcccC-
Confidence 122677999999999999999999999753321 1111111111 11100
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+..+.. ++.+||+.||++|||+.|+++
T Consensus 244 ---~~~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 ---TPSKWSVEFRD---FLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---SGGGSCHHHHH---HHHHHSCSCTTTSCCHHHHTT
T ss_pred ---CccccCHHHHH---HHHHHcccChhhCCCHHHHhc
Confidence 01112334444 455999999999999999976
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=289.48 Aligned_cols=224 Identities=21% Similarity=0.294 Sum_probs=169.0
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
..++|...+.||+|+||.||+|...+ .||+|.++... ...+.+.+|+.++++++|||| ..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35678899999999999999999744 49999987432 223567889999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ ++.+||+|||+++...
T Consensus 109 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp BCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred ecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999998654 368999999999999999999999 9999999999999998 6799999999875431
Q ss_pred ----------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 421 ----------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 421 ----------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
..++.++||||||+++|||++|+.||...... ......
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~ 255 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--------AIIWQM 255 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--------HHHHHH
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHh
Confidence 01467899999999999999999999753321 111111
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
..+.. +.......+.++. +++.+||+.||++|||+.++++.|+++.++..
T Consensus 256 -~~~~~-----~~~~~~~~~~~l~---~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 256 -GTGMK-----PNLSQIGMGKEIS---DILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp -HTTCC-----CCCCCSSCCTTHH---HHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred -ccCCC-----CCCCcCCCCHHHH---HHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11111 1111111223444 45559999999999999999999999887653
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=291.25 Aligned_cols=165 Identities=24% Similarity=0.347 Sum_probs=129.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+++.+|+++++.++||||+
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 35788889999999999999994 568999999996532 2346788999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++|+||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 36899999 68999998763 59999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||....
T Consensus 181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 234 (367)
T 2fst_X 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234 (367)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 5321 26789999999999999999999998643
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=279.68 Aligned_cols=217 Identities=16% Similarity=0.249 Sum_probs=158.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccccc--H-HHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG--E-KQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--~-~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+++.||+|+++..... . +.+.++...++.++|||| ..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45688889999999999999995 57899999999754322 2 234455566888999999 346999
Q ss_pred eecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSN--GNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
||++ |+|.+++... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 5888887641 22469999999999999999999999 7 99999999999999999999999999986432
Q ss_pred C--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 421 G--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 421 ~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
. .++.++||||||+++|||+||+.||...... ............
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~--- 231 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPS--- 231 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCC---
T ss_pred ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-------HHHHHHHhccCC---
Confidence 1 1567899999999999999999999742211 111111111111
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.......+.++.+ ++.+||+.||++|||+.|+++
T Consensus 232 ---~~~~~~~~~~~~~~---li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 ---PQLPADKFSAEFVD---FTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CCCCTTTSCHHHHH---HHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCcccccCCHHHHH---HHHHHhhcChhhCcCHHHHHh
Confidence 11111123344444 445999999999999999987
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=289.31 Aligned_cols=236 Identities=18% Similarity=0.206 Sum_probs=163.0
Q ss_pred HHHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-------------
Q 040267 273 VHLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE------------- 338 (538)
Q Consensus 273 ~~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~------------- 338 (538)
.+.....++|...+.||+|+||.||+|.. .+++.||||++........++.+|++.+..++||||+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 45667788999999999999999999996 4689999999876555456677889999999999992
Q ss_pred -----ccEEEeecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCccccCCCCCCeeeCC-CCCe
Q 040267 339 -----KPLVYKYMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWLH--HCCHPPCLHQNISSSVILVDE-DFDA 408 (538)
Q Consensus 339 -----~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~ivH~Dlkp~NIll~~-~~~~ 408 (538)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| + .+|+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcE
Confidence 4689999986 55554432 22346899999999999999999999 7 99999999999999996 8999
Q ss_pred EEEeccCCcccCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHH-
Q 040267 409 RIMDFGFSRLTNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWID- 464 (538)
Q Consensus 409 kl~Dfg~a~~~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~- 464 (538)
||+|||+++.... .++.++|||||||++|||++|+.||......+. +...+.
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~----~~~~~~~ 247 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ----LHEIVRV 247 (360)
T ss_dssp EECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHH
T ss_pred EEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH----HHHHHHH
Confidence 9999999975432 168899999999999999999999986443211 111111
Q ss_pred ----------HHhccCCcccccccc------ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 465 ----------QLSSSGRIKDVIDKA------LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 465 ----------~~~~~~~~~~~~d~~------l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
............+.. ............+.+++.+||+.||.+|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 110000000000000 0000000122344555559999999999999999874
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=280.33 Aligned_cols=218 Identities=19% Similarity=0.313 Sum_probs=169.7
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc----------ccHHHHHHHHHHHhcCC-CCCC--------
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK----------LGEKQFLLEMKQVGLLK-HPNL-------- 337 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-H~ni-------- 337 (538)
..++|...+.||+|+||.||+|... +++.||||.++... ...+.+.+|++++++++ ||||
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467888999999999999999964 68899999986432 12356889999999996 9999
Q ss_pred ---cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 338 ---EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 338 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEeccc
Confidence 3469999999999999998754 59999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 415 FSRLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 415 ~a~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
++..... .++.++||||||+++|||++|+.||...... ......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~ 241 (298)
T 1phk_A 170 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LMLRMI 241 (298)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH
T ss_pred chhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--------HHHHHH
Confidence 9875432 1467899999999999999999999753221 111111
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. .+... ...+.. ...+..+ .+++.+||+.||++|||+.|+++
T Consensus 242 ~-~~~~~-~~~~~~--~~~~~~l---~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 242 M-SGNYQ-FGSPEW--DDYSDTV---KDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp H-HTCCC-CCTTTG--GGSCHHH---HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred h-cCCcc-cCcccc--cccCHHH---HHHHHHHccCCcccCCCHHHHHh
Confidence 1 11111 000000 1122344 44555999999999999999975
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=284.50 Aligned_cols=167 Identities=17% Similarity=0.264 Sum_probs=145.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe--CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCC------C-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML--LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPN------L-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n------i-----------~~~ 340 (538)
++|...+.||+|+||.||+|.. .+++.||||+++......+.+.+|+++++.++|++ + ..+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 4788889999999999999985 36889999999865555677899999999998765 4 336
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC----------------
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---------------- 404 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---------------- 404 (538)
+||||+ +++|.+++...+...+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 999999 8899999988765578999999999999999999999 99999999999999987
Q ss_pred ---CCCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 405 ---DFDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 405 ---~~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
++.+||+|||+++.... .++.++||||||+++|||++|+.||....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp EESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred cccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 67899999999875432 27889999999999999999999998643
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=299.62 Aligned_cols=222 Identities=18% Similarity=0.265 Sum_probs=169.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
.+.|...+.||+|+||.||+|... ++..||+|.++... .....+.+|+.+++.++||||+ .++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346888899999999999999964 68899999997532 3356789999999999999993 46999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCcccC
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLTN 420 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~ 420 (538)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999987665 59999999999999999999999 999999999999999764 559999999987543
Q ss_pred C---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 421 G---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 421 ~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. .++.++||||+||++|||++|+.||...... ....... .+... ...+.
T Consensus 191 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~-~~~~~-~~~~~ 260 (494)
T 3lij_A 191 NQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVE-KGKYT-FDSPE 260 (494)
T ss_dssp TTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HTCCC-CCSGG
T ss_pred CCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH-hCCCC-CCchh
Confidence 2 1678999999999999999999999864321 1111111 11111 00111
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHh
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSI 520 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i 520 (538)
. ...+.++..+++ +||+.||.+|||+.|+++. +.+.
T Consensus 261 ~--~~~s~~~~~li~---~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 261 W--KNVSEGAKDLIK---QMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp G--TTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred c--ccCCHHHHHHHH---HHCCCChhhCccHHHHhcCcccccC
Confidence 1 122345555555 9999999999999999863 4444
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=286.67 Aligned_cols=227 Identities=22% Similarity=0.259 Sum_probs=169.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|...+.||+|+||.||+|.. .+|+.||+|++.... .....+.+|+++++.++||||+
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688889999999999999996 578999999986432 2346788999999999999992
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++||||+++ +|.+.+.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3699999985 8888776654 259999999999999999999999 99999999999999999999999999998
Q ss_pred cccC----------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 417 RLTN----------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 417 ~~~~----------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
+... ..++.++|||||||++|||+||+.||......+ ....+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~i~~~~~ 246 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-----QLALISQLCG 246 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHHhC
Confidence 6432 116789999999999999999999998643221 1111111111
Q ss_pred c---CCccccccccc--------c-CCCcHHHH------HHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 469 S---GRIKDVIDKAL--------T-GKGYDDEI------LQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 469 ~---~~~~~~~d~~l--------~-~~~~~~~~------~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
. ......-+... . .....+.. ..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0 00000000000 0 00111111 224556669999999999999999873
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=280.57 Aligned_cols=217 Identities=18% Similarity=0.307 Sum_probs=165.1
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
..++|...+.||+|+||.||+|... +|+.||+|.+.... ..+++.+|+.++.+++|||| ..++||||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 3457888899999999999999964 58999999997543 34678999999999999999 33699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+|+||||+||+++.++.+||+|||++.....
T Consensus 106 ~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (314)
T 3com_A 106 CGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 181 (314)
T ss_dssp CTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence 99999999997432 269999999999999999999999 9999999999999999999999999999864321
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++||||||+++|||++|+.||...... ......... ....... .
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~----~ 248 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--------RAIFMIPTN-PPPTFRK----P 248 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS-CCCCCSS----G
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcC-CCcccCC----c
Confidence 1578999999999999999999999753221 111111111 0000000 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+..+.. ++.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~l~~---li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTD---FVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHH---HHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHH---HHHHHccCChhhCcCHHHHHh
Confidence 112334444 455999999999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=289.90 Aligned_cols=232 Identities=16% Similarity=0.209 Sum_probs=171.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC-----------CCCC----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-----------HPNL---------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------H~ni---------- 337 (538)
++|...+.||+|+||.||+|.. .+++.||||.+.......+.+.+|++++.+++ |+||
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 4688889999999999999995 56899999999866555677889999999886 7788
Q ss_pred -----cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeC------CC
Q 040267 338 -----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVD------ED 405 (538)
Q Consensus 338 -----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~------~~ 405 (538)
..++||||+ +++|.+++.......+++..+..++.||+.||+|||+ . +|+||||||+|||++ ..
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCc
Confidence 236899999 8899999987655569999999999999999999999 8 999999999999994 44
Q ss_pred CCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCccccccc--ccHHHHH
Q 040267 406 FDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK--GNLVNWI 463 (538)
Q Consensus 406 ~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~--~~~~~~~ 463 (538)
+.+||+|||+++.... .++.++|||||||++|||+||+.||.......... ..+....
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 5899999999975432 17889999999999999999999998543221100 0111111
Q ss_pred HHH-----------------hcc-CCcccccccc-------c--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 464 DQL-----------------SSS-GRIKDVIDKA-------L--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 464 ~~~-----------------~~~-~~~~~~~d~~-------l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
... ... +....+.... + ...........+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 000 000 0000000000 0 01233455566777888999999999999999987
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=279.83 Aligned_cols=227 Identities=19% Similarity=0.266 Sum_probs=169.4
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe--CCCCEEEEEEccccc---ccHHHHHHHHHHHhcC---CCCCCc----------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML--LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLL---KHPNLE---------- 338 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~H~ni~---------- 338 (538)
.+.++|...+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.+++.+ +||||.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3457889999999999999999996 468899999986432 1224567788777766 899992
Q ss_pred ------ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 339 ------KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 339 ------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
.++||||++ |+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEec
Confidence 358999998 699999987665569999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc-c
Q 040267 413 FGFSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-S 469 (538)
Q Consensus 413 fg~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 469 (538)
||+++.... .++.++||||||+++|||++|+.||......+ ....+..... .
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~i~~~~~~~ 238 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-----QLGKILDVIGLP 238 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCCC
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHHHcCCC
Confidence 999875431 16889999999999999999999998643221 1111111110 0
Q ss_pred --CCccc-------ccc----ccc--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 470 --GRIKD-------VID----KAL--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 470 --~~~~~-------~~d----~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..+.. ... ..+ .....+..+.+++. +||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHH---HHcCCCcccCCCHHHHhc
Confidence 00000 000 000 00112334444444 999999999999999985
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=285.96 Aligned_cols=165 Identities=23% Similarity=0.328 Sum_probs=143.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc----------------c
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE----------------K 339 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~----------------~ 339 (538)
.++|...+.||+|+||.||+|... +|+.||||.++... ....++.+|++++++++||||. .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467888899999999999999964 68999999997433 2345688999999999999992 3
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
++||||+. |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 69999997 5999999874 49999999999999999999999 99999999999999999999999999998743
Q ss_pred C----------------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 420 N----------------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 420 ~----------------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. ..++.++|||||||++|||++|+.||....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 126778999999999999999999998643
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=284.91 Aligned_cols=221 Identities=18% Similarity=0.242 Sum_probs=157.1
Q ss_pred hcCCCCC-CeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------------ccE
Q 040267 279 TSNFSAQ-NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------KPL 341 (538)
Q Consensus 279 ~~~f~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------~~l 341 (538)
.++|... ++||+|+||.||+|... +++.||||++..... ...+....+..++||||. .++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 4567774 46999999999999965 699999999965322 222233345667899982 468
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 418 (538)
||||+++|+|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++.
T Consensus 104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999999999988765679999999999999999999999 99999999999999986 45699999999975
Q ss_pred cCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 419 TNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 419 ~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.... ++.++||||||+++|||++|+.||.......... ........+.. ..
T Consensus 181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~-~~-- 252 (336)
T 3fhr_A 181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-----GMKRRIRLGQY-GF-- 252 (336)
T ss_dssp C----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CC--
T ss_pred ccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-----hHHHhhhcccc-cc--
Confidence 4321 4568899999999999999999997543221100 00000000000 00
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
+.......+.++.++++ +||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 253 PNPEWSEVSEDAKQLIR---LLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CTTTSTTCCHHHHHHHH---HHSCSSGGGSCCHHHHHHS
T ss_pred CchhhccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 00001122344555554 9999999999999999973
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=293.14 Aligned_cols=221 Identities=22% Similarity=0.284 Sum_probs=162.4
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------------ccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------------KPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------------~~lv 342 (538)
+|...+.||+|+||.||+|+.. +|+.||||++..... ...+|++++++++||||+ .++|
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 5777899999999999999964 699999999865322 234799999999999993 2489
Q ss_pred EeecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHS--NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~ 419 (538)
|||+++ +|.+.+.. .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 67666643 122469999999999999999999999 999999999999999965 56899999999753
Q ss_pred CC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc--------
Q 040267 420 NG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-------- 468 (538)
Q Consensus 420 ~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 468 (538)
.. .++.++|||||||++|||++|+.||......+ .+...+...-.
T Consensus 208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~----~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD----QLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCSCCHHHHHH
T ss_pred ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHHHHHh
Confidence 21 26789999999999999999999998643321 11111111000
Q ss_pred -cCCccccccccccC--------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 -SGRIKDVIDKALTG--------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 -~~~~~~~~d~~l~~--------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.....+..-+.+.. ...+.++. +|+.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI---ALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHH---HHHHHHSCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHH---HHHHHhccCChhHCCCHHHHhC
Confidence 00111111111111 11123444 4555999999999999999986
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=286.85 Aligned_cols=164 Identities=21% Similarity=0.327 Sum_probs=140.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|+.+++.++||||+
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35788889999999999999995 4689999999975332 246788999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++||||+. |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 179999997 589888743 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 246 (371)
T 4exu_A 193 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246 (371)
T ss_dssp -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4321 26889999999999999999999998643
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=307.00 Aligned_cols=214 Identities=20% Similarity=0.267 Sum_probs=170.8
Q ss_pred HhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcC-CCCCC-----------ccc
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLL-KHPNL-----------EKP 340 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~H~ni-----------~~~ 340 (538)
..++|...++||+|+||.||+|.. .+++.||||++++. ....+.+..|..++..+ +||+| ..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 456799999999999999999995 46889999999753 23346788999999988 68988 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++...+ .+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999998765 59999999999999999999999 999999999999999999999999999998521
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
. .++.++|||||||++|||++|+.||...... +....... +..
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~-~~~----- 559 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIME-HNV----- 559 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHS-SCC-----
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--------HHHHHHHh-CCC-----
Confidence 1 1788999999999999999999999864321 11222221 111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSM-----YQVYI 515 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 515 (538)
.+ ....+.++.++++ +||+.||++||++ +||++
T Consensus 560 -~~-p~~~s~~~~~li~---~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 -AY-PKSMSKEAVAICK---GLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -CC-CTTSCHHHHHHHH---HHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -CC-CccCCHHHHHHHH---HHccCCHHHCCCCCCCcHHHHhc
Confidence 01 1223445666666 9999999999998 56654
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=281.63 Aligned_cols=164 Identities=24% Similarity=0.354 Sum_probs=136.9
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCcc------------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLEK------------------ 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~~------------------ 339 (538)
++|...+.||+|+||.||+|... +++.||+|++.... ...+++.+|++++++++||||..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56788899999999999999965 48999999986543 33467899999999999999932
Q ss_pred -------cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEE
Q 040267 340 -------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIM 411 (538)
Q Consensus 340 -------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 411 (538)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence 48999998 6999999753 48999999999999999999999 9999999999999997 56799999
Q ss_pred eccCCcccC---------------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 412 DFGFSRLTN---------------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 412 Dfg~a~~~~---------------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
|||+++... ..++.++||||||+++|||++|+.||....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 999997542 126778999999999999999999998643
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=286.82 Aligned_cols=164 Identities=21% Similarity=0.275 Sum_probs=139.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|+.+++.++||||+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35788889999999999999985 468899999996532 2245688999999999999991
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++||||+++ +|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 2799999975 88888863 48999999999999999999999 999999999999999999999999999997
Q ss_pred ccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 418 LTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 418 ~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... .++.++|||||||++|||++|+.||....
T Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432 16889999999999999999999998643
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=285.45 Aligned_cols=167 Identities=17% Similarity=0.267 Sum_probs=143.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CC-CEEEEEEcccccccHHHHHHHHHHHhcCCCCC------C-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DG-SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPN------L-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n------i-----------~~~ 340 (538)
++|...+.||+|+||.||+|... ++ +.||+|+++......+.+.+|++++++++|++ + ..+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 57888899999999999999953 44 68999999865555677889999999998766 3 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee------------------
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV------------------ 402 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll------------------ 402 (538)
+||||+ ++++.+++.......+++.++..++.|++.||+|||+ .+|+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccccccc
Confidence 999999 6688888877654579999999999999999999999 999999999999999
Q ss_pred -CCCCCeEEEeccCCcccCC--------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 403 -DEDFDARIMDFGFSRLTNG--------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 403 -~~~~~~kl~Dfg~a~~~~~--------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.++.+||+|||+++.... .++.++|||||||++|||++|+.||....
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 5678999999999975332 27889999999999999999999998643
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-33 Score=272.41 Aligned_cols=218 Identities=19% Similarity=0.282 Sum_probs=170.9
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv 342 (538)
..++|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++|||| ..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3457889999999999999999964 68999999986432 345789999999999999999 33599
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC---CCeEEEeccCCccc
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED---FDARIMDFGFSRLT 419 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~ 419 (538)
+||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999987654 58999999999999999999999 999999999999999754 47999999998754
Q ss_pred CC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 420 NG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 420 ~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.. .++.++||||||+++|||++|+.||...... ...... ..+...... +
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~-~~~~~~~~~-~ 244 (287)
T 2wei_A 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRV-ETGKYAFDL-P 244 (287)
T ss_dssp CCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH-HHCCCCCCS-G
T ss_pred cCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-HcCCCCCCc-h
Confidence 32 1678899999999999999999999753321 111111 111111000 0
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ....++++..+++ +|++.||++|||+.|+++
T Consensus 245 ~--~~~~~~~~~~li~---~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 245 Q--WRTISDDAKDLIR---KMLTFHPSLRITATQCLE 276 (287)
T ss_dssp G--GTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHH
T ss_pred h--hhhcCHHHHHHHH---HHcccChhhCcCHHHHhc
Confidence 0 0112334444444 999999999999999987
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=285.25 Aligned_cols=223 Identities=17% Similarity=0.225 Sum_probs=170.4
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccccc------------------HHHHHHHHHHHhcCCCCCC---
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLG------------------EKQFLLEMKQVGLLKHPNL--- 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~E~~~l~~l~H~ni--- 337 (538)
.++|...+.||+|+||.||+|.. +++.||+|.+...... .+.+.+|++++++++||||
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999999 9999999999643211 1789999999999999999
Q ss_pred --------cccEEEeecCCCCHHHH------hhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 --------EKPLVYKYMSNGTLYSL------LHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 --------~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ ..+|+||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 34699999999999999 665434579999999999999999999996 37899999999999999
Q ss_pred CCCCeEEEeccCCcccCCC----------------------CCC-ccCcccHHHHHHHHHhCCCCCCCCcccccccccHH
Q 040267 404 EDFDARIMDFGFSRLTNGD----------------------ASL-QKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLV 460 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~----------------------~~~-~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 460 (538)
.++.+||+|||.+...... ++. ++||||||+++|||++|+.||...... ..+
T Consensus 187 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~- 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL----VEL- 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----HHH-
T ss_pred CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHH-
Confidence 9999999999999754221 223 899999999999999999999854321 111
Q ss_pred HHHHHHhccCCcccc------cccccc------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 461 NWIDQLSSSGRIKDV------IDKALT------GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 461 ~~~~~~~~~~~~~~~------~d~~l~------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... ..+..... ..+... ....+.++.+ ++.+||+.||++|||+.|+++
T Consensus 262 --~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 --FNNI-RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDID---FLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HHHH-TSCCCCCCCSSSSSTTTTCC--------CCCHHHHH---HHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHHH-hccCcCCccchhhhhccccccccccchhhcCHHHHH---HHHHHccCChhhCCCHHHHhc
Confidence 1111 11111000 000000 0122334444 555999999999999999987
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=295.79 Aligned_cols=224 Identities=18% Similarity=0.245 Sum_probs=161.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------------~~lv 342 (538)
.+|...+.||+|+||.||+|+..++..||+|++..... ...+|+++++.++||||+ .++|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 35788899999999999999987777799998854322 123699999999999992 4589
Q ss_pred EeecCCCCHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~ 420 (538)
|||++++.+...... .....+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 999987544333221 112369999999999999999999999 9999999999999999 78999999999997532
Q ss_pred C-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc---------
Q 040267 421 G-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS--------- 468 (538)
Q Consensus 421 ~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 468 (538)
. .++.++|||||||++|||++|+.||......+. +...+...-.
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~----l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ----LVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHHHCCCCHHHHHHH
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCCHHHHHhh
Confidence 1 178899999999999999999999986443211 1111111000
Q ss_pred cCCccccccccccC--------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 469 SGRIKDVIDKALTG--------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 469 ~~~~~~~~d~~l~~--------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
........-+.... ...+.++ .+++.+||+.||++|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDA---IDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHH---HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHH---HHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000000 1122344 445559999999999999999874
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=286.80 Aligned_cols=164 Identities=24% Similarity=0.331 Sum_probs=130.8
Q ss_pred CCC-CCeEeecCCceEEEEEeC---CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-------------ccEEEe
Q 040267 282 FSA-QNVLVSTWTGTTYKAMLL---DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-------------KPLVYK 344 (538)
Q Consensus 282 f~~-~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-------------~~lv~e 344 (538)
|.. .++||+|+||.||+|+.. +++.||||++..... ...+.+|++++++++||||+ .++|||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 443 458999999999999965 478999999975433 35788999999999999992 358999
Q ss_pred ecCCCCHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeee----CCCCCeEEEec
Q 040267 345 YMSNGTLYSLLHSNG-------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV----DEDFDARIMDF 413 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Df 413 (538)
|++ |+|.+++.... ...+++..+..|+.|++.||+|||+ .+|+||||||+|||+ +.++.+||+||
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 997 48888876321 1248999999999999999999999 999999999999999 67899999999
Q ss_pred cCCcccCC---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 414 GFSRLTNG---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 414 g~a~~~~~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
|+++.... .++.++|||||||++|||++|+.||....
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99974321 16788999999999999999999997543
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=280.43 Aligned_cols=163 Identities=21% Similarity=0.327 Sum_probs=140.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|...+.||+|+||.||+|.. .+|+.||||.+..... ..+++.+|+.+++.++||||+
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4677889999999999999995 4689999999975332 235688999999999999991
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 279999997 588887753 48999999999999999999999 9999999999999999999999999999975
Q ss_pred cCC---------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 419 TNG---------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 419 ~~~---------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
... .++.++||||||+++|||++|+.||....
T Consensus 176 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 228 (353)
T 3coi_A 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred CCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 321 26789999999999999999999998643
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=283.81 Aligned_cols=212 Identities=19% Similarity=0.302 Sum_probs=163.1
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc-------cHHHHHHHHHHHhcC----CCCCC----
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL-------GEKQFLLEMKQVGLL----KHPNL---- 337 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l----~H~ni---- 337 (538)
+.....++|...+.||+|+||.||+|.. .+++.||||.++.... ....+.+|+.++.++ +|+||
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3344567899999999999999999985 5689999999975432 123466799999998 89999
Q ss_pred -------cccEEEee-cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCe
Q 040267 338 -------EKPLVYKY-MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDA 408 (538)
Q Consensus 338 -------~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~ 408 (538)
..++|+|| +++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeE
Confidence 34689999 78999999998755 59999999999999999999999 9999999999999999 88999
Q ss_pred EEEeccCCcccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHH
Q 040267 409 RIMDFGFSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 409 kl~Dfg~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
||+|||+++..... .+.++||||||+++|||++|+.||..... ..
T Consensus 180 kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~--- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------IL--- 246 (312)
T ss_dssp EECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------HH---
T ss_pred EEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------Hh---
Confidence 99999998765321 23489999999999999999999974210 00
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ... .+ ....+..+.. ++.+||+.||++|||+.|+++
T Consensus 247 -~-~~~------~~-~~~~~~~~~~---li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 -E-AEL------HF-PAHVSPDCCA---LIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -H-TCC------CC-CTTSCHHHHH---HHHHHTCSSTTTSCCHHHHHH
T ss_pred -h-hcc------CC-cccCCHHHHH---HHHHHccCChhhCcCHHHHhc
Confidence 0 000 01 1122334444 455999999999999999987
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=280.45 Aligned_cols=216 Identities=15% Similarity=0.210 Sum_probs=166.3
Q ss_pred HhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCC--CCCC-----------cccE
Q 040267 278 ATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLK--HPNL-----------EKPL 341 (538)
Q Consensus 278 ~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--H~ni-----------~~~l 341 (538)
..++|...+.||+|+||.||++...+++.||||.+.... ...+.+.+|++++.+++ |+|| ..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 345688889999999999999998889999999996433 23467899999999997 5888 3358
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||| +.+++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++ +.+||+|||+++....
T Consensus 106 v~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 999 56789999998765 68999999999999999999999 99999999999999964 8999999999875321
Q ss_pred ------------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHH
Q 040267 422 ------------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 422 ------------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 465 (538)
.++.++||||||+++|||++|+.||..... .......
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~~ 251 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHA 251 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHH
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-------HHHHHHH
Confidence 245589999999999999999999975321 1111112
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
....... ... ....+.++.++++ +||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~-----~~~-~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 252 IIDPNHE-----IEF-PDIPEKDLQDVLK---CCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHCTTSC-----CCC-CCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred HHhcccc-----cCC-cccchHHHHHHHH---HHccCCcccCcCHHHHhcC
Confidence 1111110 001 1122344444444 9999999999999999874
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-33 Score=278.97 Aligned_cols=220 Identities=18% Similarity=0.273 Sum_probs=161.1
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHH-HHhcCCCCCCc-----------ccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMK-QVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~-~l~~l~H~ni~-----------~~lv~ 343 (538)
.++|...+.||+|+||.||+|.. .+|+.||||+++... ....++..|+. +++.++||||. .++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35788889999999999999996 468999999997543 22345666666 77888999993 35899
Q ss_pred eecCCCCHHHHhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 344 KYMSNGTLYSLLHS---NGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 344 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
||+++ +|.+++.. .....+++..+.+++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 88887763 223469999999999999999999999 8 9999999999999999999999999999753
Q ss_pred CC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 420 NG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 420 ~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.. .++.++||||||+++|||++|+.||....... ....... .+...
T Consensus 177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~-~~~~~ 248 (327)
T 3aln_A 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLTQVV-KGDPP 248 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCC-CSCCC
T ss_pred ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHHHHh-cCCCC
Confidence 21 15779999999999999999999997532110 0000000 00000
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+ .... ....+..+.+ ++.+||+.||++|||+.|+++
T Consensus 249 ~~-~~~~-~~~~~~~l~~---li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 249 QL-SNSE-EREFSPSFIN---FVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC-CCCS-SCCCCHHHHH---HHHHHTCSSGGGSCCHHHHTT
T ss_pred CC-CCcc-cccCCHHHHH---HHHHHhhCChhhCcCHHHHHh
Confidence 00 0000 0112334444 455999999999999999986
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-33 Score=284.09 Aligned_cols=209 Identities=19% Similarity=0.332 Sum_probs=166.2
Q ss_pred HHhcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc-------cHHHHHHHHHHHhcCC--CCCC---------
Q 040267 277 AATSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL-------GEKQFLLEMKQVGLLK--HPNL--------- 337 (538)
Q Consensus 277 ~~~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~--H~ni--------- 337 (538)
...++|...+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|+.++++++ |+||
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456788899999999999999984 5689999999965321 1245778999999996 5998
Q ss_pred --cccEEEeecCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC-CCCCeEEEec
Q 040267 338 --EKPLVYKYMSN-GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD-EDFDARIMDF 413 (538)
Q Consensus 338 --~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Df 413 (538)
..++|+||+.+ ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 33589999976 89999998754 58999999999999999999999 9999999999999999 7799999999
Q ss_pred cCCcccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 414 GFSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 414 g~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
|+++..... .+.++||||||+++|||++|+.||..... ... +.
T Consensus 195 g~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------------~~~-~~ 259 (320)
T 3a99_A 195 GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------------IIR-GQ 259 (320)
T ss_dssp TTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------HHH-CC
T ss_pred ccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------------hhc-cc
Confidence 998754321 35678999999999999999999974210 000 00
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. . . ....++++..+++ +||+.||++|||+.||++
T Consensus 260 ~--~----~-~~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V--F----F-RQRVSSECQHLIR---WCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C--C----C-SSCCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred c--c----c-cccCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 0 0 1 1122344444444 999999999999999987
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=285.13 Aligned_cols=209 Identities=17% Similarity=0.147 Sum_probs=158.1
Q ss_pred cCCCCCCeEeecCCceEEEEE-eCCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCC-CCC----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAM-LLDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKH-PNL---------------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H-~ni---------------- 337 (538)
.+|...+.||+|+||+||+|. ..+|+.||||+++... ...+.+.+|+.+++.++| +|.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346677899999999999999 5579999999987322 234679999999999987 221
Q ss_pred ---------------------cccEEEeecCCCCHHHHhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 040267 338 ---------------------EKPLVYKYMSNGTLYSLLH-----SNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCL 391 (538)
Q Consensus 338 ---------------------~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iv 391 (538)
..+++|+++ +++|.+++. ......+++..++.++.|++.||+|||+ .+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 123455544 679999985 2223458889999999999999999999 9999
Q ss_pred ccCCCCCCeeeCCCCCeEEEeccCCcccCC-----------------------------CCCCccCcccHHHHHHHHHhC
Q 040267 392 HQNISSSVILVDEDFDARIMDFGFSRLTNG-----------------------------DASLQKDVHGFGVVLLELVTG 442 (538)
Q Consensus 392 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-----------------------------~~~~~~DV~S~Gvvl~elltg 442 (538)
||||||+|||++.++.+||+|||+++.... .++.++|||||||++|||+||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 999999999999999999999999864321 145699999999999999999
Q ss_pred CCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 443 QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 443 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.||......+.. ..++.. ....++++..++. +||+.||++|||+.|+++
T Consensus 314 ~~Pf~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~li~---~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 314 DLPNTDDAALGGS-----------------EWIFRS---CKNIPQPVRALLE---GFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SCCCCTTGGGSCS-----------------GGGGSS---CCCCCHHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcchhhhH-----------------HHHHhh---cccCCHHHHHHHH---HHccCChhhCcCHHHHHh
Confidence 9999864332111 111110 0122344455555 999999999999887754
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-32 Score=294.42 Aligned_cols=233 Identities=18% Similarity=0.247 Sum_probs=168.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc-----------------c
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE-----------------K 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~-----------------~ 339 (538)
++|...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+ .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999995 568999999987532 3346789999999999999992 2
Q ss_pred cEEEeecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC---eEEEeccC
Q 040267 340 PLVYKYMSNGTLYSLLHSNG-NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD---ARIMDFGF 415 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~ 415 (538)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 59999999999999998754 2358999999999999999999999 99999999999999997665 99999999
Q ss_pred CcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC---
Q 040267 416 SRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG--- 470 (538)
Q Consensus 416 a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 470 (538)
+..... .++.++||||||+++|||++|+.||..... ...|........
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-------~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-------PVQWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-------HHHSSTTCC------
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-------hhhhhhhhhcccchh
Confidence 976432 167899999999999999999999975321 111111110000
Q ss_pred -----Ccccc--ccccc--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH-----HHHHHHHhHH
Q 040267 471 -----RIKDV--IDKAL--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQ-----VYISLCSIAE 522 (538)
Q Consensus 471 -----~~~~~--~d~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e-----vl~~L~~i~~ 522 (538)
..... ....+ ...........+.+++.+||+.||++|||+.| ..+.+.++.+
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 00000 00000 01112223344555555999999999999988 4456666544
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-32 Score=269.67 Aligned_cols=216 Identities=17% Similarity=0.274 Sum_probs=152.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEccccccc--H-HHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLG--E-KQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~-~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
.++|...+.||+|+||.||+|... +|+.||||.+...... . +.+.++..+++.++|||| ..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 346778889999999999999964 6899999999754322 2 234455567888899999 336999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 421 (538)
||+ ++.+..+..... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~-~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 455655554322 368999999999999999999998 6 899999999999999999999999999864321
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++||||||+++|||++|+.||...... ............
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~---- 247 (318)
T 2dyl_A 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------FEVLTKVLQEEP---- 247 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHHHHHHSCC----
T ss_pred ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-------HHHHHHHhccCC----
Confidence 1567899999999999999999999752211 111112111110
Q ss_pred cccccc-CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALT-GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+.+. ....+.++..++. +||+.||.+|||+.|+++
T Consensus 248 --~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 --PLLPGHMGFSGDFQSFVK---DCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --CCCCSSSCCCHHHHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred --CCCCccCCCCHHHHHHHH---HHccCChhHCcCHHHHhh
Confidence 0011 0112344555555 999999999999999986
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-32 Score=283.53 Aligned_cols=214 Identities=19% Similarity=0.230 Sum_probs=156.8
Q ss_pred CCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc-----------ccEEEeecCCC
Q 040267 282 FSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE-----------KPLVYKYMSNG 349 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~e~~~~g 349 (538)
|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+ .++||||+. |
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 33457899999999987776789999999986532 45678999999886 899993 368999996 6
Q ss_pred CHHHHhhcCCCC-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-------------CCeEEE
Q 040267 350 TLYSLLHSNGNT-----ALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-------------FDARIM 411 (538)
Q Consensus 350 sL~~~l~~~~~~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-------------~~~kl~ 411 (538)
+|.+++...... ..++..++.++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 999999875421 12344567899999999999999 999999999999999653 589999
Q ss_pred eccCCcccCC----------------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccccccc
Q 040267 412 DFGFSRLTNG----------------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYK 456 (538)
Q Consensus 412 Dfg~a~~~~~----------------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 456 (538)
|||+++.... .++.++|||||||++|||+| |+.||......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---- 246 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---- 246 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH----
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh----
Confidence 9999874321 25678999999999999999 99999753221
Q ss_pred ccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 457 GNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
......... ... .............+.+++.+||+.||++|||+.||++
T Consensus 247 --~~~i~~~~~---~~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 --ESNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHHTCC---CCC-----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHhcCCC---Ccc-----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111111100 000 0111112233344556666999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-32 Score=281.30 Aligned_cols=213 Identities=20% Similarity=0.251 Sum_probs=156.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc-----------ccEEEeecC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE-----------KPLVYKYMS 347 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv~e~~~ 347 (538)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+ .++||||++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 35777889999999997665566899999999965332 2356899999999 799993 369999996
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-----CCCeEEEeccCCcccCC-
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-----DFDARIMDFGFSRLTNG- 421 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~Dfg~a~~~~~- 421 (538)
|+|.+++..... ...+..+..++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+++....
T Consensus 102 -g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 102 -ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp -EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred -CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 599999987652 35556678999999999999999 99999999999999953 34688999999874321
Q ss_pred ----------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 422 ----------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 422 ----------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.++.++|||||||++|||+| |+.||...... . ..........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~---~~~~~~~~~~ 247 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------Q---ANILLGACSL 247 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------H---HHHHTTCCCC
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------H---HHHHhccCCc
Confidence 14568999999999999999 99999642211 0 1111111111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.... .....+.. +.+++.+||+.||++|||+.||++
T Consensus 248 -~~~~---~~~~~~~~---~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 248 -DCLH---PEKHEDVI---ARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -TTSC---TTCHHHHH---HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cccC---ccccccHH---HHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000 01112223 344555999999999999999984
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=295.42 Aligned_cols=210 Identities=14% Similarity=0.202 Sum_probs=164.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------c-----c
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------E-----K 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~-----~ 339 (538)
++|...+.||+|+||.||+|... +++.||||.+.... .....+.+|++++.+++|||| . .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67888999999999999999964 58999999986432 234568899999999999999 1 4
Q ss_pred cEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||+ .+|+||||||+|||++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 899999999999988754 59999999999999999999999 999999999999999986 9999999999865
Q ss_pred CCC------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 420 NGD------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 420 ~~~------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
... .+.++|||||||++|||++|..||....... +. .
T Consensus 232 ~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------~~-------~ 286 (681)
T 2pzi_A 232 NSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------LP-------E 286 (681)
T ss_dssp TCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS------------------CC-------T
T ss_pred ccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc------------------cc-------c
Confidence 431 5678999999999999999998886421100 00 0
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHHHHHHhHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWS-MYQVYISLCSIAE 522 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~L~~i~~ 522 (538)
..........+.+++.+||+.||++||+ ++++.+.|..+..
T Consensus 287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0001111234555666999999999994 6667777776543
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-30 Score=257.88 Aligned_cols=161 Identities=14% Similarity=0.128 Sum_probs=135.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---------ccHHHHHHHHHHHhcCC---------CCCC----
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---------LGEKQFLLEMKQVGLLK---------HPNL---- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~---------H~ni---- 337 (538)
++|...+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|++++++++ ||||
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4677889999999999999998 78999999997532 22377889999998886 5554
Q ss_pred -------------------------------------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 040267 338 -------------------------------------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLS 380 (538)
Q Consensus 338 -------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~ 380 (538)
..++||||+++|++.+.+... .+++.++..|+.||+.||+
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~---~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK---LSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT---CCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc---CCCHHHHHHHHHHHHHHHH
Confidence 146999999999777666542 5899999999999999999
Q ss_pred HHh-cCCCCCccccCCCCCCeeeCCCC--------------------CeEEEeccCCcccCCC-----------------
Q 040267 381 WLH-HCCHPPCLHQNISSSVILVDEDF--------------------DARIMDFGFSRLTNGD----------------- 422 (538)
Q Consensus 381 yLH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~----------------- 422 (538)
||| + .+|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 176 ~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~ 252 (336)
T 2vuw_A 176 VAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGD 252 (336)
T ss_dssp HHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCC
T ss_pred HHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCC
Confidence 999 8 9999999999999999887 8999999999854321
Q ss_pred CCCccCcccHHHH-HHHHHhCCCCCC
Q 040267 423 ASLQKDVHGFGVV-LLELVTGQKPFE 447 (538)
Q Consensus 423 ~~~~~DV~S~Gvv-l~elltg~~p~~ 447 (538)
.+.++||||+|++ .+++++|..||.
T Consensus 253 ~~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 253 GDYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp SSHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred CccceehhhhhCCCCcccccccCCCc
Confidence 4678999998777 777888999985
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-25 Score=218.30 Aligned_cols=170 Identities=35% Similarity=0.520 Sum_probs=152.8
Q ss_pred CCChhhHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCCc--ccccccCCC-CCCCEEEEEcCCCCccc--cCcccccCCC
Q 040267 7 ATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICR--FNGVSCWNG-LENRILSLELEEMNLSG--QVPESLQSCK 80 (538)
Q Consensus 7 ~~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~~~~~~~c~--w~gv~C~~~-~~~~l~~L~L~~n~l~g--~~p~~~~~l~ 80 (538)
.+.++|+.||+.|| ++.+|. .+++|..+ .+||. |.||.|+.. ..++|+.|+|++|+++| .+|+.|++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~----~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~ 76 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT----TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT----SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC----CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCC
Confidence 46678999999999 888876 78899742 35788 999999752 12689999999999999 9999999999
Q ss_pred CCCeEEccC-CcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEe
Q 040267 81 SLQVLNLST-NNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS 159 (538)
Q Consensus 81 ~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ 159 (538)
+|++|+|++ |+++|.+|..+.. +++|++|+|++|++++.+|..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCeeeCCCCCcccccCChhHhc-CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 999999995 9999999999987 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccccc-ccccc
Q 040267 160 VAYNCLSGRIPSFFNGAM-KMDML 182 (538)
Q Consensus 160 l~~N~l~g~~p~~~~~~~-~l~~~ 182 (538)
+++|.++|.+|..+..+. .|..+
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L 179 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSM 179 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEE
Confidence 999999999999887765 55443
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-24 Score=227.95 Aligned_cols=152 Identities=19% Similarity=0.136 Sum_probs=111.8
Q ss_pred EeecCCceEEEEE-eCCCCEEEEEEccccc-----------ccHHHHHHHHHHHhcC-CCCCC-----------cccEEE
Q 040267 288 LVSTWTGTTYKAM-LLDGSMLAIKRLSACK-----------LGEKQFLLEMKQVGLL-KHPNL-----------EKPLVY 343 (538)
Q Consensus 288 ig~G~~g~vy~~~-~~~~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~l-~H~ni-----------~~~lv~ 343 (538)
.+.|+.|.++.++ .-.|+.+|+|.+.... ...++|.+|+++|+++ .|+|| ..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666666554 3358899999996431 1235699999999999 69999 457999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||++||+|.++|...+ .++.. +|+.||+.||+|+|+ .+||||||||+|||+++++.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999998766 46653 589999999999999 99999999999999999999999999999977654
Q ss_pred CCCccCcccHHHHHHHHHhCCCCCC
Q 040267 423 ASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 423 ~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
....+++++.|++..|+++|+.++.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g~~~~~ 418 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAENKSWN 418 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC-------
T ss_pred ccccCceechhhccHHHhCCCCCCc
Confidence 4456677778888778777765543
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=8e-23 Score=228.74 Aligned_cols=164 Identities=21% Similarity=0.285 Sum_probs=142.7
Q ss_pred CCCChhhHHHHHHhh-cCCCCCCCCCCCCCCC---CCCCCCCcc------------cccccCCCCCCCEEEEEcCCCCcc
Q 040267 6 TATAEDDVKCLAGIK-SFNDPQGKLSSWSLTN---SSVGFICRF------------NGVSCWNGLENRILSLELEEMNLS 69 (538)
Q Consensus 6 ~~~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~---~~~~~~c~w------------~gv~C~~~~~~~l~~L~L~~n~l~ 69 (538)
+++..+|+.||+.|| ++.+| +|+.+. ...+++|+| .||+|+. .++|+.|+|++|+|+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCE
T ss_pred cccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC--CCCEEEEECccCCCC
Confidence 344567999999999 88776 897643 112223999 9999975 579999999999999
Q ss_pred ccCcccccCCCCCCeEEc-cCCcCCCc-----------------------------------------------------
Q 040267 70 GQVPESLQSCKSLQVLNL-STNNLFGK----------------------------------------------------- 95 (538)
Q Consensus 70 g~~p~~~~~l~~L~~L~L-s~N~l~g~----------------------------------------------------- 95 (538)
|.+|++|++|++|+.|+| ++|.++|.
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 88866555
Q ss_pred -----------------------CChhHhhcCCCCcEEEcccCCCCC-----------------CCCccCc--CCCCCcE
Q 040267 96 -----------------------IPTQLCKWFPYLVSLDLSNNDLSG-----------------TIPHELG--NCVYLNT 133 (538)
Q Consensus 96 -----------------------ip~~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~ 133 (538)
||..+++ +++|++|+|++|+|+| .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccchhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 8888887 9999999999999998 4999988 9999999
Q ss_pred eeecCccccCCCCccccCCccccEEeccccc-CCC-CCCccccccc
Q 040267 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNC-LSG-RIPSFFNGAM 177 (538)
Q Consensus 134 L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~-l~g-~~p~~~~~~~ 177 (538)
|+|++|++.|.+|..|.++++|+.|++++|+ |+| .+|..+..+.
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~ 541 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA 541 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh
Confidence 9999999999999999999999999999998 999 8898776554
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9e-22 Score=193.20 Aligned_cols=139 Identities=12% Similarity=0.081 Sum_probs=114.4
Q ss_pred CHHHHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc-------------------cHHHHHHHHHHHhc
Q 040267 271 KLVHLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-------------------GEKQFLLEMKQVGL 331 (538)
Q Consensus 271 ~~~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~E~~~l~~ 331 (538)
.+..+......|...+.||+|+||.||+|...+|+.||+|.++.... ....+.+|++++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 44455566666777899999999999999997799999999964221 24568899999999
Q ss_pred CCCCCC-------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC
Q 040267 332 LKHPNL-------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE 404 (538)
Q Consensus 332 l~H~ni-------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 404 (538)
++|.++ ..++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+||||||+|||++
T Consensus 161 l~~~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 161 LQGLAVPKVYAWEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp TTTSSSCCEEEEETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-
T ss_pred ccCCCcCeEEeccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-
Confidence 986555 4579999999999998 422 2345799999999999999 9999999999999999
Q ss_pred CCCeEEEeccCCcccCCC
Q 040267 405 DFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 405 ~~~~kl~Dfg~a~~~~~~ 422 (538)
++.+||+|||+++.....
T Consensus 228 ~~~vkl~DFG~a~~~~~~ 245 (282)
T 1zar_A 228 EEGIWIIDFPQSVEVGEE 245 (282)
T ss_dssp TTEEEECCCTTCEETTST
T ss_pred CCcEEEEECCCCeECCCC
Confidence 999999999999876543
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-22 Score=216.47 Aligned_cols=162 Identities=22% Similarity=0.297 Sum_probs=140.6
Q ss_pred CCChhhHHHHHHhh-cCCCCC--------CCCCCCCCCCCCCCCCCcc---cccccCCCCCCCEEEEEcCCCCccccCcc
Q 040267 7 ATAEDDVKCLAGIK-SFNDPQ--------GKLSSWSLTNSSVGFICRF---NGVSCWNGLENRILSLELEEMNLSGQVPE 74 (538)
Q Consensus 7 ~~~~~~~~~l~~~~-~~~~~~--------~~l~~W~~~~~~~~~~c~w---~gv~C~~~~~~~l~~L~L~~n~l~g~~p~ 74 (538)
+....|+.||..++ ++.++. ....+|..+ .++|.| .||+|+. .++|+.|+|++++++|.+|+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~----~~~c~w~~~~GV~C~~--~~~V~~L~L~~~~l~g~lp~ 99 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN----KELDMWGAQPGVSLNS--NGRVTGLSLEGFGASGRVPD 99 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS----SCGGGTTCCTTEEECT--TCCEEEEECTTSCCEEEECG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC----CCcccccCCCCeEEcC--CCCEEEEEecCcccCCcCCh
Confidence 34457999999998 765432 223478743 468999 9999975 37999999999999999999
Q ss_pred cccCCCCCCeEEccCCc---------------------------------------------------------------
Q 040267 75 SLQSCKSLQVLNLSTNN--------------------------------------------------------------- 91 (538)
Q Consensus 75 ~~~~l~~L~~L~Ls~N~--------------------------------------------------------------- 91 (538)
+|++|++|++|+|++|.
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 99999999999999984
Q ss_pred ---------------CCCcCChhHhhcCCCCcEEEcccCCCCCC-----------------CCccCc--CCCCCcEeeec
Q 040267 92 ---------------LFGKIPTQLCKWFPYLVSLDLSNNDLSGT-----------------IPHELG--NCVYLNTLYLS 137 (538)
Q Consensus 92 ---------------l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~ls 137 (538)
|+| ||..+++ +++|++|+|++|+++|. +|..++ ++++|++|+|+
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~ 257 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVY 257 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccchhhhhhccccCCCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEec
Confidence 445 8988887 99999999999999986 999999 99999999999
Q ss_pred CccccCCCCccccCCccccEEeccccc-CCC-CCCcccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNC-LSG-RIPSFFNGA 176 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~-l~g-~~p~~~~~~ 176 (538)
+|+++|.+|..|.++++|+.|++++|+ ++| .+|..+..+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L 298 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQAL 298 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHH
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhh
Confidence 999999999999999999999999998 999 899877654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=209.81 Aligned_cols=123 Identities=16% Similarity=0.248 Sum_probs=99.0
Q ss_pred CCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---------cHHHHHHHHHHHhcCCCCCCc-----------ccEE
Q 040267 283 SAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---------GEKQFLLEMKQVGLLKHPNLE-----------KPLV 342 (538)
Q Consensus 283 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~H~ni~-----------~~lv 342 (538)
...+.||+|+||.||+|.. .++.+++|+...... ..+++.+|++++++++||||+ .++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999954 678899998643211 124589999999999999994 4699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|||+++|+|.+++.. +..++.|++.||+|||+ .+|+||||||+|||+++ .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999975 45899999999999999 99999999999999999 999999999997754
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-21 Score=219.12 Aligned_cols=158 Identities=27% Similarity=0.353 Sum_probs=122.9
Q ss_pred cCCCCChhhHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCEEEEEcCCCCcccc---Cc------
Q 040267 4 TPTATAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQ---VP------ 73 (538)
Q Consensus 4 ~~~~~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~~~~~~~c~w~gv~C~~~~~~~l~~L~L~~n~l~g~---~p------ 73 (538)
+++++.++|+.||+.|| ++.||. .+++|.. ..+||+|.||+|+ .++|+.|+|++++++|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~----~~~~C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSS----NKNPCTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCT----TSCGGGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCCC----CCCCcCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhcc
Confidence 34455678999999999 888888 8999973 2469999999997 37999999999999987 54
Q ss_pred -----------------ccccCCCCCCeEEccCCcCCCcCCh--hHhhcCCCCcEEEcccCCCCCCCCccC-cCCCCCcE
Q 040267 74 -----------------ESLQSCKSLQVLNLSTNNLFGKIPT--QLCKWFPYLVSLDLSNNDLSGTIPHEL-GNCVYLNT 133 (538)
Q Consensus 74 -----------------~~~~~l~~L~~L~Ls~N~l~g~ip~--~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~ 133 (538)
..|+.+++|++|+|++|.++|.+|. .++. +++|++|+|++|.+++.+|..+ ..+++|++
T Consensus 77 ~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 77 TGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS-CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp TTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGG-CTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred CcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhC-CCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 4677888899999999999888888 7777 8889999999998888888765 77888888
Q ss_pred eeecCccccCCCCcc---ccCCccccEEecccccCCCCCC
Q 040267 134 LYLSYNRLSGPLPPQ---LSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 134 L~ls~N~l~g~~p~~---l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|+|++|++++..|.. +.++++|++|++++|.+++.+|
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 195 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD 195 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC
Confidence 888888887766655 5555555555555555555444
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-21 Score=194.23 Aligned_cols=172 Identities=21% Similarity=0.309 Sum_probs=142.6
Q ss_pred CCCChhhHHHHHHhh-cC-CCCCCCCCCCCCCCCCCCCCCcccccccCC-------CCCCCEEEEEcCCCCccccCcccc
Q 040267 6 TATAEDDVKCLAGIK-SF-NDPQGKLSSWSLTNSSVGFICRFNGVSCWN-------GLENRILSLELEEMNLSGQVPESL 76 (538)
Q Consensus 6 ~~~~~~~~~~l~~~~-~~-~~~~~~l~~W~~~~~~~~~~c~w~gv~C~~-------~~~~~l~~L~L~~n~l~g~~p~~~ 76 (538)
+++..++..+|+.|| .+ .++.+.+++|..+.....++|.|.|+.|.. ....+|+.|+|++|+++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 345568899999999 56 577666788953222345789999999952 12367999999999998 888889
Q ss_pred cCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccC-----
Q 040267 77 QSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSS----- 151 (538)
Q Consensus 77 ~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~----- 151 (538)
+.+++|++|+|++|.++ .+|..+.. +++|++|+|++|.++ .+|..++.+++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~-l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQ-FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGG-GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhc-cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 99999999999999999 89988877 999999999999998 88999999999999999999999999987765
Q ss_pred ----CccccEEecccccCCCCCCcccccccccccc
Q 040267 152 ----LVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 152 ----l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+++|+.|++++|.++ .+|..+..+++|..+
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L 211 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSL 211 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEE
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEE
Confidence 889999999999998 788877777666544
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=175.34 Aligned_cols=130 Identities=15% Similarity=0.113 Sum_probs=105.1
Q ss_pred CCCCCeEeecCCceEEEEEe-CCCCE--EEEEEccccccc-------------------------HHHHHHHHHHHhcCC
Q 040267 282 FSAQNVLVSTWTGTTYKAML-LDGSM--LAIKRLSACKLG-------------------------EKQFLLEMKQVGLLK 333 (538)
Q Consensus 282 f~~~~~ig~G~~g~vy~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~E~~~l~~l~ 333 (538)
|...+.||+|+||.||+|.. .+|+. ||||.++..... ...+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999996 68888 999987542111 135789999999998
Q ss_pred CCCC---------cccEEEeecCC-C----CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCccccCCCCC
Q 040267 334 HPNL---------EKPLVYKYMSN-G----TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLH-HCCHPPCLHQNISSS 398 (538)
Q Consensus 334 H~ni---------~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dlkp~ 398 (538)
|+++ ..++||||+.+ | +|.++... .++..+..++.|++.||.||| + .+|+||||||+
T Consensus 129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~---~givHrDlkp~ 200 (258)
T 1zth_A 129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQE---AELVHADLSEY 200 (258)
T ss_dssp HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHT---SCEECSSCSTT
T ss_pred hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHH
Confidence 8765 34699999942 4 77776543 235567899999999999999 8 99999999999
Q ss_pred CeeeCCCCCeEEEeccCCcccCC
Q 040267 399 VILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 399 NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
|||+++ .++|+|||+|.....
T Consensus 201 NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp SEEESS--SEEECCCTTCEETTS
T ss_pred HEEEcC--cEEEEECcccccCCC
Confidence 999998 999999999987643
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.9e-19 Score=166.87 Aligned_cols=141 Identities=22% Similarity=0.305 Sum_probs=122.7
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|+|.+|.|.+. ....++.|+|++|++++..|..|..+++|+.|+|++|+|+ .+|...+..+++|++|+
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEE
Confidence 45799999999752 2357899999999999998999999999999999999997 67766544599999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+.+|..+
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 9999999776777899999999999999999 799999999999999999999998777777766655543
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-19 Score=198.32 Aligned_cols=137 Identities=34% Similarity=0.551 Sum_probs=128.3
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCc
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (538)
.++++.|.++|.+|..++.+++|+.|||++|+|+|.+|..++. ++.|+.|+|++|+++|.+|..++++++|+.|||++|
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~-l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc-cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 3566778999999999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred cccCCCCccccCCccccEEecccccCCCCCCcc--ccccccccccccccCCCCCCCCCCCC
Q 040267 140 RLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF--FNGAMKMDMLADSRLGGANLGSKCCD 198 (538)
Q Consensus 140 ~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~~~~l~~~~~~~~c~~ 198 (538)
+++|.+|..+.++++|++|++++|+|+|.+|.. |..+....+.+|+.+||.+.. .|..
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred cccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 999999999999999999999999999999964 677888899999999998876 7864
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=161.39 Aligned_cols=148 Identities=20% Similarity=0.229 Sum_probs=125.9
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|..|.|.+. ....++.|+|++|++++..+..|..+++|+.|+|++|.+++..|..+.. +++|++|+
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~ 86 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG-LRSLNSLV 86 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTT-CSSCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhC-CcCCCEEE
Confidence 45578999999752 1347899999999999888889999999999999999999777887776 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc---ccccccCC
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD---MLADSRLG 188 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~---~~~~~~l~ 188 (538)
|++|+++...+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|.|++..+..|..+++|. +.+|+..|
T Consensus 87 Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 87 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999999955555678999999999999999998899999999999999999999988887777665544 44454444
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-18 Score=157.10 Aligned_cols=142 Identities=22% Similarity=0.273 Sum_probs=119.6
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|.+|.|... ...+++.|+|++|++++..+..|..+++|++|+|++|+++ .+|...+..+++|++|+
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEE
Confidence 34589999999752 1347999999999999777777899999999999999999 55655444499999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..+..+..+++|++|+|++|++++..+..|..+++|+.|++++|.+++..+..+..+++|..+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 153 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI 153 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEE
Confidence 99999996666678999999999999999997777778999999999999999998777667666655443
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.2e-18 Score=160.17 Aligned_cols=142 Identities=18% Similarity=0.167 Sum_probs=122.7
Q ss_pred CCCCcccccccCCCC--------CCCEEEEEcCCCCccccCc-ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEE
Q 040267 40 GFICRFNGVSCWNGL--------ENRILSLELEEMNLSGQVP-ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSL 110 (538)
Q Consensus 40 ~~~c~w~gv~C~~~~--------~~~l~~L~L~~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L 110 (538)
.+.|.|..+.|.+.. ...++.|+|++|+|++..| ..|..+++|+.|+|++|.|++..|..+.. +++|++|
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~-l~~L~~L 86 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEG-ASGVNEI 86 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTT-CTTCCEE
T ss_pred CCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCC-CCCCCEE
Confidence 445789999997521 2457899999999998865 45899999999999999999655556665 9999999
Q ss_pred EcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 111 ~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..|..|..+.+|..+
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 158 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTL 158 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEE
Confidence 999999998878889999999999999999999889999999999999999999999989888776665543
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-17 Score=153.65 Aligned_cols=130 Identities=21% Similarity=0.206 Sum_probs=95.8
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcc-cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPE-SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSL 110 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L 110 (538)
.+.|.|..+.|.+. ....++.|+|++|++++..+. .|+.+++|++|+|++|.|++..|..+.. +++|++|
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L 83 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG-ASHIQEL 83 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCC-cccCCEE
Confidence 34578888888642 123677788888887765554 3777788888888888887666666665 7778888
Q ss_pred EcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 111 ~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|++|++++|.+++..+
T Consensus 84 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 888888877777777778888888888888887777777777888888888887777654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-17 Score=158.65 Aligned_cols=126 Identities=22% Similarity=0.246 Sum_probs=102.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..+..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD-LTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc-CCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 46888999999998888888888999999999999998665555555 88899999999999876667788888999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|+|++..|..|..+++|+.|+|++|.|++..+..|..+++|..+
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 160 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTL 160 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEE
Confidence 99998886666667888888999999998887777667666655543
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.8e-17 Score=147.93 Aligned_cols=130 Identities=21% Similarity=0.207 Sum_probs=107.4
Q ss_pred CCCCcccccccCCCC--------CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNGL--------ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|.++.|.+.. ...++.|+|++|++++..+..|..+++|++|+|++|+++ .+|...+..+++|++|+
T Consensus 4 ~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILY 82 (177)
T ss_dssp TCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEE
Confidence 345899999997521 347899999999999777777899999999999999998 45544333489999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 83 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997666678899999999999999996555567889999999999999998766
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=154.77 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=100.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..|..+++|++|+|++|.++ .+|..++..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 35788899988888776778888999999999999988 66666554588899999999988866666778888888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|.+++..|..|..+++|++|++++|.+++..+..|..+++|..+
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 162 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKEL 162 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccccee
Confidence 88888887777778888888888888888887666666666555543
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=173.28 Aligned_cols=158 Identities=22% Similarity=0.211 Sum_probs=116.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc----ccccCC--------CCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc
Q 040267 24 DPQGKLSSWSLTNSSVGFICRFN----GVSCWN--------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN 91 (538)
Q Consensus 24 ~~~~~l~~W~~~~~~~~~~c~w~----gv~C~~--------~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~ 91 (538)
|+...+++|..+.+....+|.+. .|.|.+ +.+..++.|||++|+|++..|.+|.++++|++|+|++|+
T Consensus 8 ~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 8 DDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 44445666665443333456542 367864 224578999999999998888899999999999999999
Q ss_pred CCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC-CCC
Q 040267 92 LFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG-RIP 170 (538)
Q Consensus 92 l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g-~~p 170 (538)
|++ +|+..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|++++|.+++ .+|
T Consensus 88 i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 88 IQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred CCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 994 555434449999999999999997666789999999999999999997767789999999999999999976 467
Q ss_pred cccccccccccc
Q 040267 171 SFFNGAMKMDML 182 (538)
Q Consensus 171 ~~~~~~~~l~~~ 182 (538)
..+..+++|+.+
T Consensus 167 ~~~~~l~~L~~L 178 (635)
T 4g8a_A 167 EYFSNLTNLEHL 178 (635)
T ss_dssp GGGGGCTTCCEE
T ss_pred hhhccchhhhhh
Confidence 777776666544
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.5e-17 Score=162.27 Aligned_cols=136 Identities=27% Similarity=0.397 Sum_probs=83.5
Q ss_pred CEEEEEcCCCCccccCcccccCCC-CCCeEEccCCcCCCcCChhHhh----------------------cCCCCcEEEcc
Q 040267 57 RILSLELEEMNLSGQVPESLQSCK-SLQVLNLSTNNLFGKIPTQLCK----------------------WFPYLVSLDLS 113 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~----------------------~l~~L~~L~Ls 113 (538)
+++.|+|++|.++|.+|..++.++ +|+.|+|++|.++|.+|..+.. .+++|+.|+|+
T Consensus 150 ~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 229 (313)
T 1ogq_A 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred CCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECC
Confidence 455566666666655665555555 5555555555555555544433 15555555555
Q ss_pred cCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcc--ccccccccccccccCCCCC
Q 040267 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF--FNGAMKMDMLADSRLGGAN 191 (538)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~~~~l~~~~ 191 (538)
+|.+++.+|. +..+++|++|+|++|+++|.+|..+..+++|+.|++++|+++|.+|.. +.++..+.+.+|+.+||.|
T Consensus 230 ~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 230 KNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp SSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 5555544443 556666777777777777777777777777777777777777777754 2334445566777777765
Q ss_pred CC
Q 040267 192 LG 193 (538)
Q Consensus 192 ~~ 193 (538)
..
T Consensus 309 ~~ 310 (313)
T 1ogq_A 309 LP 310 (313)
T ss_dssp SS
T ss_pred CC
Confidence 53
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.2e-16 Score=143.84 Aligned_cols=116 Identities=28% Similarity=0.362 Sum_probs=81.1
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCc
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (538)
.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..+.. +++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~-l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGG-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhc-ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 3555566666 4555442 57777888888777 67766655 777888888888887666667777788888888888
Q ss_pred cccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 140 RLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 140 ~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+|++..|..|.++++|+.|+|++|.|++..+..|..+.+|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALS 129 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCcccc
Confidence 88776666777777888888888887765555555444433
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.1e-16 Score=156.36 Aligned_cols=123 Identities=21% Similarity=0.248 Sum_probs=83.1
Q ss_pred CCEEEEEcCCCCccccCcccccC---------CCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQS---------CKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~---------l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.+++.|+|++|++.+.+|..++. +++|++|+|++|.++ .+|..+.. +++|++|+|++|.++ .+|..++
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~N~l~-~l~~~l~ 226 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN-LQNLKSLKIRNSPLS-ALGPAIH 226 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG-CTTCCEEEEESSCCC-CCCGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC-CCCCCEEEccCCCCC-cCchhhc
Confidence 35677777777777677666543 677777777777776 66666655 677777777777776 3555666
Q ss_pred CCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
.+++|++|+|++|++.+.+|..+.++++|+.|++++|++.+.+|..+.++++|..
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 281 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEK 281 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCE
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCE
Confidence 7777777777777777777777777777777777777777777766655555443
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=146.74 Aligned_cols=126 Identities=20% Similarity=0.188 Sum_probs=109.8
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..+..+..+++|++|+
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDH-LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcc-cCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 57999999999999988888999999999999999999544444444 99999999999999976666789999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|+|++..|..|..+++|+.|+|++|.|++..+..+..+++|..+
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 184 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 99999997667789999999999999999998888777766665543
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4.2e-16 Score=157.31 Aligned_cols=137 Identities=12% Similarity=0.063 Sum_probs=103.9
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccc---------------cHH--------HHHHHHHHHh
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL---------------GEK--------QFLLEMKQVG 330 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---------------~~~--------~~~~E~~~l~ 330 (538)
.+...-.-|...+.||.|++|.||+|...+|+.||||+++.... ... ...+|...|.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33343334888899999999999999988999999998753210 001 1245777888
Q ss_pred cCCCCCC---------cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCee
Q 040267 331 LLKHPNL---------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401 (538)
Q Consensus 331 ~l~H~ni---------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 401 (538)
++.+.++ ..+|||||+++++|.++... .....++.|++.+|.|||+ .+||||||||.|||
T Consensus 169 rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NIL 237 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAK---HGLIHGDFNEFNIL 237 (397)
T ss_dssp HHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEE
T ss_pred HHHhcCCCCCeeeeccCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEE
Confidence 8866655 23599999999888765321 2345788999999999999 89999999999999
Q ss_pred eCCCCC----------eEEEeccCCcccCC
Q 040267 402 VDEDFD----------ARIMDFGFSRLTNG 421 (538)
Q Consensus 402 l~~~~~----------~kl~Dfg~a~~~~~ 421 (538)
+++++. +.|+||+-+.....
T Consensus 238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 238 IREEKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp EEEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred EeCCCCcccccccccceEEEEeCCcccCCC
Confidence 987763 89999997765543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-15 Score=146.88 Aligned_cols=124 Identities=22% Similarity=0.212 Sum_probs=74.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..++.+++|++|+|++|++++..|..+.. +++|++|+|++|++++..|..++.+++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDK-LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhcc-CCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 34666666666666555555666666666666666666433333333 66666666666666655455556666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..|..+..+++|+.|++++|.+++..|..+..+++|.
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 208 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 208 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCC
Confidence 666666655555556666666666666666665555554444433
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-16 Score=139.73 Aligned_cols=124 Identities=22% Similarity=0.244 Sum_probs=109.1
Q ss_pred CCEEEEEcCCCCcc-ccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLS-GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+.. +++|++|+|++|.+++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPK-LNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCC-CTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhc-CCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 56899999999999 89999999999999999999999955 55555 9999999999999998899888889999999
Q ss_pred eecCccccCC-CCccccCCccccEEecccccCCCCCC---cccccccccccc
Q 040267 135 YLSYNRLSGP-LPPQLSSLVRLKQFSVAYNCLSGRIP---SFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~-~p~~l~~l~~L~~l~l~~N~l~g~~p---~~~~~~~~l~~~ 182 (538)
++++|.+++. .|..+..+++|+.|++++|.+++..+ ..+..+++|..+
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 145 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEE
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccc
Confidence 9999999973 45889999999999999999998766 467777776655
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=140.23 Aligned_cols=120 Identities=22% Similarity=0.300 Sum_probs=105.9
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChh-HhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeec
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQ-LCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls 137 (538)
+.|++++|+|+ .+|..+.. +|++|+|++|++++..|.. +.. +++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGR-LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGG-CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCcccccc-CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 67999999996 77876644 9999999999999655544 555 9999999999999999989999999999999999
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEE
Confidence 999999888889999999999999999999999888777666544
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-15 Score=143.14 Aligned_cols=114 Identities=12% Similarity=0.127 Sum_probs=105.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+|++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..|..+++|++|+
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKG-LESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTT-CSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcC-CcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 57999999999999888889999999999999999999655555555 99999999999999998899999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|++++..|..|..+++|+.|++++|.+++..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999999889999999999999999999997655
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=154.21 Aligned_cols=134 Identities=24% Similarity=0.211 Sum_probs=113.8
Q ss_pred CCCCCcccccccCCC--------CCCCEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhhcCCCCcE
Q 040267 39 VGFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVS 109 (538)
Q Consensus 39 ~~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~ 109 (538)
..+.|.+.-+.|.+. ....++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..+.. +++|++
T Consensus 14 ~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~-l~~L~~ 92 (361)
T 2xot_A 14 ANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVP-VPNLRY 92 (361)
T ss_dssp TTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTT-CTTCCE
T ss_pred CCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccC-CCCCCE
Confidence 345578888999752 234588999999999988888887 9999999999999999555555655 999999
Q ss_pred EEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccc
Q 040267 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 110 L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|.|++..+..|
T Consensus 93 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 156 (361)
T 2xot_A 93 LDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELI 156 (361)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGT
T ss_pred EECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHh
Confidence 9999999997777789999999999999999998888999999999999999999997555555
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=9.8e-16 Score=160.52 Aligned_cols=142 Identities=18% Similarity=0.217 Sum_probs=121.0
Q ss_pred CCCcccc--cccCCC-------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 41 FICRFNG--VSCWNG-------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 41 ~~c~w~g--v~C~~~-------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
..|.|.+ |.|.+. .+.+++.|+|++|++++..|..|+++++|++|+|++|.+.+.+|...+..+++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3466655 788652 2357999999999999988999999999999999999999888765445599999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCcc--ccCCccccEEecccccCCCCCCcc-cccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQ--LSSLVRLKQFSVAYNCLSGRIPSF-FNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~--l~~l~~L~~l~l~~N~l~g~~p~~-~~~~~~l~~~ 182 (538)
|++|++++..|..++.+++|++|+|++|++++.+|.. +.++++|+.|++++|.+++..|.. +.++++|..+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 159 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVL 159 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEE
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEE
Confidence 9999999888999999999999999999999866655 999999999999999999988865 6666666554
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.9e-15 Score=137.36 Aligned_cols=127 Identities=24% Similarity=0.275 Sum_probs=110.7
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+.|.|..+.|.+. ....++.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..|..+.. +++|++|+
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~-l~~L~~L~ 84 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSN-MTQLLTLI 84 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEE
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccC-CCCCCEEE
Confidence 34578888999752 2357999999999998 78899999999999999999999655555655 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|.+...
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999999988888899999999999999999976666799999999999999998753
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-15 Score=137.78 Aligned_cols=126 Identities=23% Similarity=0.231 Sum_probs=105.1
Q ss_pred CCCEEEEEcCCCCcc-ccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcE
Q 040267 55 ENRILSLELEEMNLS-GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT 133 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 133 (538)
..+++.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. ..+.. +++|++|+|++|++++.+|..+..+++|++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPK-LPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCC-CSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhcc-CCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 357899999999998 88898889999999999999999854 45555 899999999999999878888888999999
Q ss_pred eeecCccccCCC-CccccCCccccEEecccccCCCCCC---ccccccccccccc
Q 040267 134 LYLSYNRLSGPL-PPQLSSLVRLKQFSVAYNCLSGRIP---SFFNGAMKMDMLA 183 (538)
Q Consensus 134 L~ls~N~l~g~~-p~~l~~l~~L~~l~l~~N~l~g~~p---~~~~~~~~l~~~~ 183 (538)
|+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|..+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 999999998632 2788999999999999999997665 4666666666553
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-15 Score=162.69 Aligned_cols=139 Identities=24% Similarity=0.271 Sum_probs=117.2
Q ss_pred CCcccccccCCC----------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 42 ICRFNGVSCWNG----------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 42 ~c~w~gv~C~~~----------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.|.|.|+ |+.. ...+++.|+|++|++++..|..|.++++|++|+|++|++++..|..+.. +++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS-LGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc-cccCCEEE
Confidence 4888888 7531 1347999999999999988999999999999999999999777777776 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccC-CCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
|++|++++..|..++.+++|++|+|++|.+++ .+|..+.++++|+.|++++|.+.+.+| ..+.++++|+.+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 153 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCee
Confidence 99999997777779999999999999999997 467889999999999999998666665 567777666554
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.3e-15 Score=144.05 Aligned_cols=127 Identities=23% Similarity=0.224 Sum_probs=108.8
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC-CCCCCCccCcCCCCCcE
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND-LSGTIPHELGNCVYLNT 133 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~ 133 (538)
...++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|. ++...|..+..+++|++
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTG-LALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCC-ccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 457899999999999877788999999999999999999766777766 8999999999997 77666888999999999
Q ss_pred eeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 134 LYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 134 L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|+|++|.+++..|..+.++++|++|++++|.+++..+..+..+++|..+
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 9999999998778889999999999999999998777767766665544
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=4.8e-15 Score=161.16 Aligned_cols=127 Identities=19% Similarity=0.220 Sum_probs=110.2
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+.+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..|+++++|++|
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHG-LHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhc-hhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 457899999999999888889999999999999999999666766666 8999999999999998889999999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCC-CCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG-RIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g-~~p~~~~~~~~l~~~ 182 (538)
+|++|.+++..|..+.++++|++|++++|.+++ .+|..+.++++|+.+
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 158 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHV 158 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEE
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEE
Confidence 999999997777889999999999999999986 678888877776654
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.9e-15 Score=139.63 Aligned_cols=112 Identities=22% Similarity=0.253 Sum_probs=103.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|.|+ .+|...+..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 57999999999999999999999999999999999999 77777655599999999999999988899999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
|++|+|++..+..|..+++|+.|++++|.+...
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999999987778899999999999999999764
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-14 Score=142.24 Aligned_cols=127 Identities=21% Similarity=0.187 Sum_probs=109.6
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+..++.|+|++|++++..+..|.++++|++|+|++|.+++..+..+.. +++|++|+|++|.+++..|..+..+++|++|
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS-LSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccC-CcCCCEEECCCCccCccChhhhcCCccccEE
Confidence 346899999999999887778999999999999999999555555555 8999999999999998888889999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCC-CCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR-IPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~~~ 182 (538)
++++|++++..+..+..+++|+.|++++|.+++. +|..+..+++|+.+
T Consensus 106 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L 154 (276)
T 2z62_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (276)
T ss_dssp ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred ECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEE
Confidence 9999999977776899999999999999999874 68888877776655
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=5e-15 Score=156.20 Aligned_cols=138 Identities=21% Similarity=0.181 Sum_probs=116.8
Q ss_pred cccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccC
Q 040267 44 RFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN 115 (538)
Q Consensus 44 ~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N 115 (538)
.|..|.|.+. .+..++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.. +++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN-LFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhC-CccCCEEECCCC
Confidence 3678888642 2357899999999999888889999999999999999999777877776 999999999999
Q ss_pred CCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 116 DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 116 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++++..+..|..+++|++|+|++|.+++..|..|.++++|+.|++++|.+++..|..|.++.+|..+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 157 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQL 157 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEE
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEE
Confidence 9986555568899999999999999998888889999999999999999988888777776665544
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-15 Score=148.46 Aligned_cols=141 Identities=22% Similarity=0.216 Sum_probs=118.0
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCC--CcCChhHhhcCCCCcE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLF--GKIPTQLCKWFPYLVS 109 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~ip~~~~~~l~~L~~ 109 (538)
.+.|.|.+|.|.+. ....++.|+|++|+++...+..|..+++|++|+|++|.++ |.+|..+.. +++|++
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~~~L~~ 82 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFG-TTSLKY 82 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHS-CSCCCE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccc-ccccCE
Confidence 34589999999752 2357999999999999554556899999999999999998 334677776 899999
Q ss_pred EEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCC-ccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 110 L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..+..+++|+.+
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 999999998 688889999999999999999996554 578999999999999999998888877776666544
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-14 Score=139.68 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=80.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.++ .+|...+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 35777777777777544455567777777777777777 34433333367777777777777765556667777777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|..
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 185 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCE
Confidence 7777777544455666777777777777777655555555444443
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=9e-15 Score=153.16 Aligned_cols=126 Identities=19% Similarity=0.225 Sum_probs=113.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++.+|..++.+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG-LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC-cccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 46899999999999999999999999999999999999777777776 99999999999999988889999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..|..|..+++|++|++++|++++..+..+..+++|..+
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 400 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKI 400 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEE
Confidence 99999998889999999999999999999998777666666555443
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=6e-15 Score=149.36 Aligned_cols=140 Identities=26% Similarity=0.289 Sum_probs=115.2
Q ss_pred CCCCcccccccCC----------CCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcE
Q 040267 40 GFICRFNGVSCWN----------GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVS 109 (538)
Q Consensus 40 ~~~c~w~gv~C~~----------~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~ 109 (538)
...|.|.|+ |+- ....+++.|+|++|++++..+..|.++++|+.|+|++|.+++..|..+.. +++|++
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~ 104 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS-LGSLEH 104 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCC-CCCCCE
Confidence 457999987 542 11347999999999999877778999999999999999999766666766 999999
Q ss_pred EEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCc--cccCCccccEEeccccc-CCCCCCcccccccccccc
Q 040267 110 LDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPP--QLSSLVRLKQFSVAYNC-LSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 110 L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~l~~l~~L~~l~l~~N~-l~g~~p~~~~~~~~l~~~ 182 (538)
|+|++|++++..+..++.+++|++|+|++|++++ +|. .+..+++|+.|++++|+ +++..|..+.++++|+.+
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 9999999995444458999999999999999995 555 78999999999999994 666666777777666554
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=9.2e-15 Score=143.36 Aligned_cols=125 Identities=20% Similarity=0.209 Sum_probs=83.9
Q ss_pred CCEEEEEcCCCC-ccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMN-LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|. +++..|..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..+..++.+++|++|
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG-LAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhC-CcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 457777777776 65555666777777777777777777555555544 7777777777777775555556777777777
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
+|++|++++..+..|..+++|+.|++++|.+++..|..+..+++|..
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccE
Confidence 77777777544455677777777777777777666666665555443
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=139.94 Aligned_cols=124 Identities=22% Similarity=0.214 Sum_probs=108.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++. +.+..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..++.+++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDK-LTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcC-CcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5699999999999973 47899999999999999999655554555 99999999999999977777799999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..|..+..+++|+.|++++|.+++..+..+..+++|..+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 99999998777778999999999999999998888777776666544
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=158.00 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=109.3
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+.+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..+..|+.+++|++|
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQK-LPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHH-CTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhc-ccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 357999999999999888888999999999999999999877877777 9999999999999985444469999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++|++++..|..|.++++|++|++++|.+++..|..+.++++|+.+
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 150 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEE
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEE
Confidence 999999997777889999999999999999998888877766665544
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=141.27 Aligned_cols=120 Identities=27% Similarity=0.273 Sum_probs=74.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..|..|..+++|+.|+|++|.+++ +|.. .. +++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~-l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GT-LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SC-CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CC-CCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 457777777777777767777777777777777777763 3332 22 566666666666665 5565666666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
|++|++++..|..|.++++|+.|++++|+|++..+..|..+++|
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 150 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCC
Confidence 66666665444556666666666666666665544444444433
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-14 Score=129.20 Aligned_cols=108 Identities=22% Similarity=0.224 Sum_probs=93.2
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecC
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSY 138 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (538)
+.|++++|+|+ .+|..+ .++|+.|+|++|+|++..|..+.. +++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~-l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDR-LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcC-cccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 45777788888 477665 389999999999999776777766 99999999999999976666789999999999999
Q ss_pred ccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 139 NRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 139 N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99997667779999999999999999997654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.3e-14 Score=132.59 Aligned_cols=114 Identities=24% Similarity=0.214 Sum_probs=99.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.++ .+|...+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 57999999999999777777899999999999999999 45554433499999999999999977666789999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|++++..+..+..+++|+.|++++|.+.+..|
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99999997666678999999999999999988766
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-14 Score=162.42 Aligned_cols=136 Identities=19% Similarity=0.186 Sum_probs=104.8
Q ss_pred CcccccccCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCC
Q 040267 43 CRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP 122 (538)
Q Consensus 43 c~w~gv~C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p 122 (538)
|+|+.|.+ .+.+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+++..+..+++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 56777777 256789999999999888888888888888888888877777744333348888888888888887778
Q ss_pred ccCcCCCCCcEeeecCccccCCCCcc--ccCCccccEEecccccCCCCCC-ccccccccccc
Q 040267 123 HELGNCVYLNTLYLSYNRLSGPLPPQ--LSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDM 181 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~~p~~--l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~ 181 (538)
..|+.+++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|.++++|+.
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~ 152 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKS 152 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCE
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCE
Confidence 88888888888888888888766654 7788888888888888877654 45666555543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.8e-14 Score=138.71 Aligned_cols=121 Identities=29% Similarity=0.334 Sum_probs=71.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ . +.+++|++|+|++|.|+ .+|..+.. +++|++|+|++|++++..|..|..+++|++|+
T Consensus 55 ~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~-l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQT-LPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTT-CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhcc-CCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 356666666666664322 2 55666666666666666 55655444 66666666666666654445566666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|.
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 175 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCC
Confidence 666666654445556666666666666666654444444444433
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-14 Score=155.15 Aligned_cols=109 Identities=27% Similarity=0.278 Sum_probs=101.2
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .+|..++. +++|+.|+|++|+|++ +| .++.+++|++|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA-LRCLEVLQASDNALEN-VD-GVANLPRLQELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG-CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEEC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc-CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEEC
Confidence 47889999999997 676 999999999999999999 99999887 9999999999999996 78 8999999999999
Q ss_pred cCccccCCC-CccccCCccccEEecccccCCCCCCc
Q 040267 137 SYNRLSGPL-PPQLSSLVRLKQFSVAYNCLSGRIPS 171 (538)
Q Consensus 137 s~N~l~g~~-p~~l~~l~~L~~l~l~~N~l~g~~p~ 171 (538)
++|+|++.. |..+..+++|+.|+|++|.|++.+|.
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 999999876 99999999999999999999987664
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-14 Score=147.02 Aligned_cols=132 Identities=21% Similarity=0.199 Sum_probs=109.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+|++..+..|..+++|++|+|++|+|++..+..+.. +++|++|+|++|++++..|..|..+++|+.|+
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSD-LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCC-CcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 57999999999999888889999999999999999999444444444 99999999999999988899999999999999
Q ss_pred ecCccccCCCCcc-c---cCCccccEEecccccCCCCCCcccccccc-----ccccccccCCC
Q 040267 136 LSYNRLSGPLPPQ-L---SSLVRLKQFSVAYNCLSGRIPSFFNGAMK-----MDMLADSRLGG 189 (538)
Q Consensus 136 ls~N~l~g~~p~~-l---~~l~~L~~l~l~~N~l~g~~p~~~~~~~~-----l~~~~~~~l~~ 189 (538)
|++|+|++ +|.. | ..+++|+.|+|++|+|++..+..+..+.. +.+.+|+..|.
T Consensus 143 L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 143 LSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99999996 5554 4 57999999999999999766566665543 44555655553
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-14 Score=156.84 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=86.1
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.+..|++++|.+++..+..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..|+.+++|++|+|
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcC-CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 4566777777776555555677777777777777777555555555 777777777777777666666777777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++|.|++..|..|.++++|++|++++|.+++..|..+.++++|..+
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 7777775444445777777777777777777766666665555443
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.52 E-value=2e-14 Score=142.43 Aligned_cols=120 Identities=18% Similarity=0.164 Sum_probs=62.8
Q ss_pred CEEEEEcCCCCccccCc-ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCC-CCCccCcCCCCCcEe
Q 040267 57 RILSLELEEMNLSGQVP-ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG-TIPHELGNCVYLNTL 134 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 134 (538)
+++.|+|++|++++..+ ..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++ .+|..+..+++|++|
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG-LSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT-CTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc-CcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 45555555555554433 34555555555555555555444444433 5555555555555554 345555555555555
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAM 177 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 177 (538)
+|++|.+++..|..+..+++|+.|++++|.+++..+..+..++
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 223 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcc
Confidence 5555555554455555555555555555555544443443333
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.7e-15 Score=162.96 Aligned_cols=124 Identities=22% Similarity=0.426 Sum_probs=104.1
Q ss_pred CCEEEEEcCCCCcccc-----------------Cccccc--CCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC
Q 040267 56 NRILSLELEEMNLSGQ-----------------VPESLQ--SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 116 (538)
.+++.|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+|..++. +++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT-CSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc-CCCCCEEECcCCC
Confidence 5688899999999886 888888 8999999999999988889988877 8889999999998
Q ss_pred -CCC-CCCccCcCC------CCCcEeeecCccccCCCCc--cccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 117 -LSG-TIPHELGNC------VYLNTLYLSYNRLSGPLPP--QLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 117 -l~g-~~p~~~~~l------~~L~~L~ls~N~l~g~~p~--~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++| .+|..++.+ ++|++|+|++|+++ .+|. .+.++++|+.|++++|.++|.+| .+..+++|..+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L 358 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASL 358 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEE
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEE
Confidence 888 788887776 88888888888888 7888 88888888888888888888888 66666555443
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.51 E-value=5e-14 Score=127.56 Aligned_cols=107 Identities=19% Similarity=0.177 Sum_probs=93.0
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecC
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSY 138 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (538)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..+.. +++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDH-LVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcC-CcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 67899999996 7787664 89999999999999777777766 99999999999999965555679999999999999
Q ss_pred ccccCCCCccccCCccccEEecccccCCCCC
Q 040267 139 NRLSGPLPPQLSSLVRLKQFSVAYNCLSGRI 169 (538)
Q Consensus 139 N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~ 169 (538)
|+|++..+..|..+++|+.|+|++|.+....
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999755566999999999999999998643
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.3e-14 Score=134.04 Aligned_cols=113 Identities=22% Similarity=0.206 Sum_probs=100.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+|++..+..|..+++|+.|+|++|.|+ .+|...+..+++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 57999999999998666677899999999999999999 455554444999999999999999 8999999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|+|++..+..|..+++|+.|++++|.+++..+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999997666789999999999999999997654
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.51 E-value=9.2e-15 Score=161.76 Aligned_cols=116 Identities=26% Similarity=0.427 Sum_probs=100.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..+.. +++|++|+|++|+|+ .+|..|+.|++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKN-LSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGG-GTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhC-CCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 45778999999988 78888888999999999999998 88988876 899999999999998 8898999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~ 176 (538)
|++|.|+ .+|..|.+|++|+.|+|++|.|+|.+|..+...
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 9999997 788889999999999999999998888777543
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.7e-14 Score=140.39 Aligned_cols=133 Identities=23% Similarity=0.292 Sum_probs=114.0
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
++.|.|..+.|.+. ....++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.. +++|++|+
T Consensus 30 ~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 108 (332)
T 2ft3_A 30 GCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSP-LRKLQKLY 108 (332)
T ss_dssp SCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTT-CTTCCEEE
T ss_pred CCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhC-cCCCCEEE
Confidence 34578999999752 1347899999999999888889999999999999999999777877776 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCC--CCCCcccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS--GRIPSFFNGA 176 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~--g~~p~~~~~~ 176 (538)
|++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++ +..|..+..+
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 172 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL 172 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC
Confidence 9999998 7887765 89999999999999766677999999999999999996 3666666654
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.7e-14 Score=138.30 Aligned_cols=124 Identities=18% Similarity=0.187 Sum_probs=109.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|++++|++++..+..++.+++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG-LSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC-CccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 57999999999999888888999999999999999999666666666 99999999999999977777899999999999
Q ss_pred ecCccccC-CCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.+++ .+|..+.++++|+.|++++|.+++..+..+..+.++.
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 99999987 4799999999999999999999988777776665544
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.1e-14 Score=151.85 Aligned_cols=132 Identities=20% Similarity=0.111 Sum_probs=105.6
Q ss_pred CcccccccCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCC
Q 040267 43 CRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP 122 (538)
Q Consensus 43 c~w~gv~C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p 122 (538)
|.+.++.|.. ...++.|+|++|++++..|..++.+++|+.|+|++|.+++.+|..++..+++|++|+|++|.+++. |
T Consensus 109 N~l~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~ 185 (487)
T 3oja_A 109 NNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (487)
T ss_dssp SCCCCEEECC--CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CcCCCCCccc--cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c
Confidence 4556666643 356899999999999888888999999999999999999888888764489999999999999865 3
Q ss_pred ccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 123 HELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
.+..+++|++|+|++|.|++ +|+.+..+++|+.|++++|.|++ +|..+..+++|.
T Consensus 186 -~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~ 240 (487)
T 3oja_A 186 -GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLE 240 (487)
T ss_dssp -CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCC
T ss_pred -ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCC
Confidence 34468999999999999996 55568889999999999999986 566665554443
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.3e-14 Score=135.61 Aligned_cols=139 Identities=16% Similarity=0.219 Sum_probs=114.1
Q ss_pred CCCcc-cccc--cCC-----CCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc-CCCcCChhHhhcCCCCcEEE
Q 040267 41 FICRF-NGVS--CWN-----GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN-LFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 41 ~~c~w-~gv~--C~~-----~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~~l~~L~~L~ 111 (538)
+.|.+ .++. |.+ ..+..++.|+|++|++++..+..|..+++|+.|+|++|. ++ .+|...+..+++|++|+
T Consensus 8 C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~ 86 (239)
T 2xwt_C 8 CECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIE 86 (239)
T ss_dssp CSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEE
T ss_pred CeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEE
Confidence 34543 5554 853 123579999999999998888899999999999999997 77 56654444499999999
Q ss_pred ccc-CCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcccc---EEecccc-cCCCCCCcccccccccc-cc
Q 040267 112 LSN-NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLK---QFSVAYN-CLSGRIPSFFNGAMKMD-ML 182 (538)
Q Consensus 112 Ls~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~---~l~l~~N-~l~g~~p~~~~~~~~l~-~~ 182 (538)
|++ |++++..+..|..+++|++|+|++|.+++ +|. +..+++|+ .|++++| .+++..+..|.++.++. .+
T Consensus 87 l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTL 161 (239)
T ss_dssp EEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEE
T ss_pred CCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEE
Confidence 999 99997666789999999999999999996 887 88888888 9999999 99987777787777666 44
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=7.1e-14 Score=140.03 Aligned_cols=139 Identities=20% Similarity=0.263 Sum_probs=118.8
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
++.|.|..+.|.+. ....++.|+|++|++++..+..|+++++|++|+|++|.+++..|..+.. +++|++|+
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 106 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP-LVKLERLY 106 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEEE
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcC-CCCCCEEE
Confidence 45678999999742 2357899999999999888889999999999999999999777888876 99999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC--CCCcccccccccccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG--RIPSFFNGAMKMDML 182 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g--~~p~~~~~~~~l~~~ 182 (538)
|++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+..+.++++|..+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 9999998 7787665 799999999999998777789999999999999999964 667777777766654
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.49 E-value=5.5e-14 Score=147.29 Aligned_cols=137 Identities=19% Similarity=0.204 Sum_probs=114.8
Q ss_pred ccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC
Q 040267 45 FNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116 (538)
Q Consensus 45 w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 116 (538)
|..|.|.+. .+..++.|+|++|++++..|..|.++++|+.|+|++|.+++..|..+.. +++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNG-LASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccC-cccCCEEECCCCc
Confidence 567888752 2357999999999999999999999999999999999999766666665 9999999999999
Q ss_pred CCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 117 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
+++..+..+..+++|++|+|++|.+++..+..|.++++|+.|++++|+..+.+| ..|.++.+|..+
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 997666779999999999999999997666789999999999999965555555 456666665544
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=125.41 Aligned_cols=121 Identities=21% Similarity=0.251 Sum_probs=99.5
Q ss_pred EEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeec
Q 040267 58 ILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137 (538)
Q Consensus 58 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls 137 (538)
.+.+++++++++ .+|..+ .++|+.|+|++|++++..+..+.. +++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDK-LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcC-cccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 367999999998 456544 379999999999999544444444 9999999999999996666678999999999999
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++++..|..+..+++|+.|++++|.+++..+..+..+++|..+
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 129 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 129 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEE
Confidence 999998777778999999999999999997766666666555443
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=5.6e-14 Score=152.68 Aligned_cols=124 Identities=19% Similarity=0.126 Sum_probs=106.8
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+..++.|+|++|++++..|..|+++++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..++.+++|++|
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 110 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS-QHRLDTLVLTANPLIFMAETALSGPKALKHL 110 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCSEECTTTTSSCTTCCEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccC-ccccCeeeCCCCcccccChhhhcccccccEe
Confidence 457899999999999888999999999999999999999777877776 9999999999999998889999999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCC-CCcccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR-IPSFFNGAMKMD 180 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~ 180 (538)
+|++|.+++..|..+.++++|++|++++|.+++. +|..+. +++|+
T Consensus 111 ~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~ 156 (606)
T 3t6q_A 111 FFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP-TEKLK 156 (606)
T ss_dssp ECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC-CTTCC
T ss_pred eccccCcccCCcchhccCCcccEEECCCCcccccCcccccC-CcccC
Confidence 9999999976678889999999999999999874 344332 44433
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=6.1e-14 Score=152.79 Aligned_cols=134 Identities=16% Similarity=0.165 Sum_probs=115.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC-cCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG-KIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..+..++++.|.+++..|..+..+++|+.|+|++|++.+ .+|..+.. +++|++|+|++|++++..|..|+.+++|++|
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~-l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhh-ccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 467889999999999999999999999999999998654 45665555 9999999999999999999999999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccc----ccccccccccCCCC
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA----MKMDMLADSRLGGA 190 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~----~~l~~~~~~~l~~~ 190 (538)
+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..+ ..+...+|+..|.+
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 999999999888899999999999999999999999887654 33445566666543
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=7.7e-14 Score=151.58 Aligned_cols=123 Identities=17% Similarity=0.204 Sum_probs=113.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG-LTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTT-CTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCC-cccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 57999999999999988999999999999999999999777888877 99999999999999977778899999999999
Q ss_pred ecCccccC-CCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
|++|.+++ .+|..|.++++|++|++++|.+++..|..+..+.++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 179 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLREN 179 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcc
Confidence 99999986 689999999999999999999999888888776654
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-13 Score=148.66 Aligned_cols=127 Identities=20% Similarity=0.189 Sum_probs=109.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|+.+++|+.|+|++|.+++..|..+.. +++|++|+|++|.+++..+..|+.+++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcC-CCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46899999999999988889999999999999999999766666666 99999999999999955555579999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLA 183 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~~ 183 (538)
|++|.+++..|..|.++++|+.|++++|.+++..+..+.++..+.+.+
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 201 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCS
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhccc
Confidence 999999998898999999999999999999987555555555444433
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-13 Score=143.23 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=113.3
Q ss_pred ccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC
Q 040267 45 FNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND 116 (538)
Q Consensus 45 w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 116 (538)
|..|.|.+. ....++.|+|++|++++..+..|.++++|+.|+|++|.+++..|..+.. +++|++|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~-l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG-LANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTT-CSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccC-CccCCEEECCCCc
Confidence 567899752 2356899999999999988899999999999999999999555555555 9999999999999
Q ss_pred CCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 117 LSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 117 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
+++..+..|..+++|++|+|++|.+++..+..|.++++|+.|++++|+..+.++ ..|.++.+|+.+
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 996666689999999999999999997667789999999999999965555555 456666665544
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=147.30 Aligned_cols=126 Identities=21% Similarity=0.206 Sum_probs=79.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..|.++++|++|+|++|++++..|..+.. +++|++|+|++|++++..|..|+.+++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS-LSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccC-chhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 45666777777776666666667777777777777766444444444 66677777777766655556666666666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCC-CCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG-RIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g-~~p~~~~~~~~l~~~ 182 (538)
|++|++++..+..+.++++|++|++++|.+++ .+|..+.++++|+.+
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 154 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEE
Confidence 66666664433356666666666666666665 356655555544433
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.45 E-value=6.6e-14 Score=154.92 Aligned_cols=106 Identities=31% Similarity=0.464 Sum_probs=93.5
Q ss_pred CcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccC
Q 040267 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSS 151 (538)
Q Consensus 72 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~ 151 (538)
.|..+..++.|+.|+|++|.+. .+|..++. +++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|.+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFK-YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGG-CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcC-CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 3667889999999999999999 89999987 999999999999999 99999999999999999999999 88999999
Q ss_pred CccccEEecccccCCCCCCcccccccccccc
Q 040267 152 LVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 152 l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++|+|++|.|+ .+|..|..+.+|..+
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL 321 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCE
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEE
Confidence 999999999999997 778888877776654
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=122.99 Aligned_cols=112 Identities=23% Similarity=0.220 Sum_probs=98.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC-CCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT-IPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.. +++|++|+|++|.+++. .+..+..+++|++|
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEK-LPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHH-CTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhh-CCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 4699999999999976 78999999999999999999878887766 99999999999999853 22789999999999
Q ss_pred eecCccccCCCC---ccccCCccccEEecccccCCCCCCc
Q 040267 135 YLSYNRLSGPLP---PQLSSLVRLKQFSVAYNCLSGRIPS 171 (538)
Q Consensus 135 ~ls~N~l~g~~p---~~l~~l~~L~~l~l~~N~l~g~~p~ 171 (538)
+|++|.+++..+ ..+..+++|++|++++|.+.. +|.
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~ 164 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE-APD 164 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB-CCS
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh-ccc
Confidence 999999996544 489999999999999999874 443
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.2e-14 Score=156.44 Aligned_cols=122 Identities=22% Similarity=0.330 Sum_probs=111.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc-CCC-cCChhHhhcCC-------CCcEEEcccCCCCCCCCc--c
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN-LFG-KIPTQLCKWFP-------YLVSLDLSNNDLSGTIPH--E 124 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~ip~~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~ 124 (538)
.+++.|+|++|++.|.+|..|+++++|+.|+|++|+ |+| .+|..++. ++ +|++|+|++|+++ .+|. .
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~-L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR-LADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHH-HHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHh-hhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 569999999999999999999999999999999998 998 89988876 55 9999999999999 8998 8
Q ss_pred CcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccc-cccc
Q 040267 125 LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK-MDML 182 (538)
Q Consensus 125 ~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~-l~~~ 182 (538)
++++++|+.|+|++|+++ .+| .|..+++|+.|+|++|.++ .+|..+..+++ |..+
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L 624 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGL 624 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEE
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEE
Confidence 999999999999999999 899 8999999999999999999 88887777666 5544
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=145.95 Aligned_cols=126 Identities=22% Similarity=0.210 Sum_probs=108.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++..|..|.++++|++|+|++|.++ .+|...+..+++|++|+|++|++++..|..+..+++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 56999999999999988999999999999999999998 56655444489999999999999988888999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|.+++..|..|.++++|+.|++++|.+++..+..+..+++|..+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 181 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 181 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEE
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEE
Confidence 99999998888899999999999999999997766666666655543
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.8e-14 Score=141.92 Aligned_cols=110 Identities=22% Similarity=0.261 Sum_probs=90.0
Q ss_pred CCEEEEEcCCCCccccCcccc--cCCCCCCeEEccCCcCCCcCChhHhhcC-----CCCcEEEcccCCCCCCCCccCcCC
Q 040267 56 NRILSLELEEMNLSGQVPESL--QSCKSLQVLNLSTNNLFGKIPTQLCKWF-----PYLVSLDLSNNDLSGTIPHELGNC 128 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l 128 (538)
.+++.|+|++|+++|.+|..+ +.+++|++|+|++|++++. |..+.. + ++|++|+|++|++++..|..++.+
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~-l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE-LQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH-HHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH-HHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 468888888888888888876 8888899999999988866 776665 5 888999999999887777888888
Q ss_pred CCCcEeeecCccccCC--CCccc--cCCccccEEecccccCCC
Q 040267 129 VYLNTLYLSYNRLSGP--LPPQL--SSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~--~p~~l--~~l~~L~~l~l~~N~l~g 167 (538)
++|++|+|++|+++|. +|..+ ..+++|+.|++++|.+++
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 8999999999888765 34444 788888888888888884
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.5e-13 Score=127.06 Aligned_cols=119 Identities=12% Similarity=0.208 Sum_probs=77.6
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|+|++|+++ .+| .+..+++|++|++++|.++ . +..+.. +++|++|++++|.+++..|..++.+++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~-l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISG-LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTT-CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhc-CCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 4667777777776 445 4667777777777777554 2 234444 677777777777777666667777777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++|.+++..|..+..+++|+.|++++|.+.+.+| .+..+++|..
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~ 163 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKS 163 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCE
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCE
Confidence 7777776666667777777777777776333444 3444444443
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-13 Score=137.58 Aligned_cols=110 Identities=20% Similarity=0.190 Sum_probs=92.0
Q ss_pred CCcccccccCCCCCCCEEEEEcCCC-CccccCcccccCCCCCCeEEccC-CcCCCcCChhHhhcCCCCcEEEcccCCCCC
Q 040267 42 ICRFNGVSCWNGLENRILSLELEEM-NLSGQVPESLQSCKSLQVLNLST-NNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119 (538)
Q Consensus 42 ~c~w~gv~C~~~~~~~l~~L~L~~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 119 (538)
.|.|..|.|. ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..+.. +++|++|+|++|+|++
T Consensus 7 ~C~~~~v~~~-------------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~-l~~L~~L~l~~N~l~~ 70 (347)
T 2ifg_A 7 PHGSSGLRCT-------------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRG-LGELRNLTIVKSGLRF 70 (347)
T ss_dssp CSSSSCEECC-------------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCS-CCCCSEEECCSSCCCE
T ss_pred cccCCEEEcC-------------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhcc-ccCCCEEECCCCccce
Confidence 3777777774 34 677 4788 99999999999996 9999555556655 9999999999999999
Q ss_pred CCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 120 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
..|..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|.|...
T Consensus 71 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 71 VAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp ECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred eCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 8898999999999999999999965555555555 99999999999864
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-13 Score=137.92 Aligned_cols=125 Identities=19% Similarity=0.196 Sum_probs=110.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc--cCcCCCCCcE
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH--ELGNCVYLNT 133 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 133 (538)
.+++.|+|++|++++..|..|.++++|++|+|++|.++ .+|...+..+++|++|+|++|+++ .+|. .+..+++|++
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 57999999999999988889999999999999999999 577664444999999999999998 5665 7899999999
Q ss_pred eeecCcc-ccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 134 LYLSYNR-LSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 134 L~ls~N~-l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++++|+ +++..|..|.++++|+.|++++|.+++..|..+..+++|..+
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 203 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHL 203 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEE
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCee
Confidence 9999994 776667889999999999999999999889888887776655
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-13 Score=147.77 Aligned_cols=125 Identities=17% Similarity=0.160 Sum_probs=110.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCC-CCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG-TIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|++++..|..|+.+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++ .+|..++.+++|++|
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP-LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT-CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc-CCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 57999999999999988899999999999999999999666655766 9999999999999986 467889999999999
Q ss_pred eecCccccCCCC-ccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 135 YLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 135 ~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++++|.+.+.+| ..|.++++|+.|++++|.+++.+|..+..+.++..
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 999999666676 58999999999999999999998988776655443
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=141.87 Aligned_cols=126 Identities=18% Similarity=0.160 Sum_probs=101.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|++++|.++...+..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccC-CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46788999999888655555788999999999999998555556655 89999999999999877777889999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|.++...+..|.++++|++|++++|.+++..|..+..+++|+.+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEE
Confidence 99999984333446889999999999999988777777776666554
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-13 Score=148.80 Aligned_cols=122 Identities=23% Similarity=0.196 Sum_probs=67.2
Q ss_pred CEEEEEcCCCCccccCccc-ccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC---CCccCcCCCCCc
Q 040267 57 RILSLELEEMNLSGQVPES-LQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT---IPHELGNCVYLN 132 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~---~p~~~~~l~~L~ 132 (538)
+++.|+|++|.+++..|+. +..+++|+.|+|++|.+++..|..+.. +++|++|+|++|.+++. .+..+..+++|+
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG-LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT-CTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC-CCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 4566666666665554433 555666666666666665555544444 55555666655555541 223455555555
Q ss_pred EeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 133 ~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
+|+|++|++++..|..|.++++|+.|++++|++++..|..+.+++.+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 55555555555555555555555555555555555555555544443
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.2e-13 Score=125.86 Aligned_cols=120 Identities=17% Similarity=0.249 Sum_probs=100.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.++ .++.+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSG-LTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTT-CTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcC-CCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 46899999999765 3457899999999999999999878888776 99999999999999988888999999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.+.+.+| .+..+++|+.|++++|.+++. + .+..+++|..
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~ 185 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQ 185 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCE
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCE
Confidence 99998444677 689999999999999999874 3 4555555443
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-13 Score=135.96 Aligned_cols=115 Identities=22% Similarity=0.282 Sum_probs=76.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCc--CChhH-hhcCCCCcEEEcccCCCCCCCCc----cCcCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGK--IPTQL-CKWFPYLVSLDLSNNDLSGTIPH----ELGNC 128 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--ip~~~-~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l 128 (538)
.+++.|+|++|++++..|..++.+++|++|+|++|++.+. ++... ...+++|++|+|++|+++ .+|. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 4688888888888877777888888888888888887652 22111 122666777777777775 3333 24566
Q ss_pred CCCcEeeecCccccCCCCccccCC---ccccEEecccccCCCCCCcc
Q 040267 129 VYLNTLYLSYNRLSGPLPPQLSSL---VRLKQFSVAYNCLSGRIPSF 172 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~~p~~l~~l---~~L~~l~l~~N~l~g~~p~~ 172 (538)
++|++|+|++|++++..|..+..+ ++|+.|++++|+|+ .+|..
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~ 269 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKG 269 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhh
Confidence 777777777777776666666655 46777777777777 44543
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.8e-13 Score=134.69 Aligned_cols=117 Identities=23% Similarity=0.284 Sum_probs=80.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCc--CChhH--hhcCCCCcEEEcccCCCCC--CCC-ccCcCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGK--IPTQL--CKWFPYLVSLDLSNNDLSG--TIP-HELGNC 128 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--ip~~~--~~~l~~L~~L~Ls~N~l~g--~~p-~~~~~l 128 (538)
.+++.|+|++|++++..|..|+.+++|++|+|++|++.|. +|..+ .. +++|++|+|++|++++ .++ ..+..+
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~l 227 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK-FPTLQVLALRNAGMETPSGVCSALAAAR 227 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS-CTTCCEEECTTSCCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc-CCCCCEEECCCCcCcchHHHHHHHHhcC
Confidence 4678888888888877777788888888888888887765 23333 33 7777777777777762 222 233566
Q ss_pred CCCcEeeecCccccCCCC-ccccCCccccEEecccccCCCCCCcccc
Q 040267 129 VYLNTLYLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
++|++|+|++|++++..| ..+..+++|+.|++++|.|+ .+|..+.
T Consensus 228 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 228 VQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp CCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred CCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 777777777777777664 44556677777777777777 5565443
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-13 Score=147.40 Aligned_cols=124 Identities=17% Similarity=0.173 Sum_probs=75.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++..+. +..+++|+.|++++|.+++..|...+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 373 ~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp SCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 3567777777777654333 666666666666666666554432222366666666666666666666666666666666
Q ss_pred ecCcccc-CCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLS-GPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~-g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.++ +.+|..+..+++|+.|++++|.+++..|..+..+++|.
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 6666665 45666666666666666666666665565555544443
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.42 E-value=4.1e-13 Score=121.01 Aligned_cols=104 Identities=20% Similarity=0.265 Sum_probs=89.5
Q ss_pred CCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEc
Q 040267 41 FICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112 (538)
Q Consensus 41 ~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 112 (538)
+.|.|+.+.|.+. ....++.|+|++|+|++..|..|..+++|++|+|++|+|+ .+|...+..+++|++|+|
T Consensus 7 C~C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 7 CSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCcCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEEC
Confidence 4578999999752 1357899999999999998999999999999999999999 566555444999999999
Q ss_pred ccCCCCCCCCccCcCCCCCcEeeecCccccCCC
Q 040267 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPL 145 (538)
Q Consensus 113 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 145 (538)
++|+|++..|..|..+++|++|+|++|.++..-
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999999766667999999999999999998643
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=3.6e-13 Score=140.51 Aligned_cols=120 Identities=20% Similarity=0.196 Sum_probs=63.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhc----------------------CCCCcEEEcc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW----------------------FPYLVSLDLS 113 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~----------------------l~~L~~L~Ls 113 (538)
.+++.|+|++|.+++..+..|..+++|+.|+|++|+..+.+|...+.. +++|+.|+|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls 215 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLS 215 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECT
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECC
Confidence 356677777777665554455555555555555533333444332222 4455555555
Q ss_pred cCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccc
Q 040267 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNG 175 (538)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~ 175 (538)
+|.+++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..
T Consensus 216 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 216 GNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred CCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 55555444555555555555555555555555555555555555555555555544444433
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.7e-13 Score=136.63 Aligned_cols=125 Identities=21% Similarity=0.252 Sum_probs=107.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L 134 (538)
.+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|.++ .+|.. ++.+++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcC-CCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 46899999999999888889999999999999999999766666666 999999999999999 55554 6999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+|++|.+++..|..+..+++|+.|++++|.+++.....+.++..+...
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~ 194 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVS 194 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecc
Confidence 999999998888889999999999999999997644445555444443
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-13 Score=120.56 Aligned_cols=104 Identities=21% Similarity=0.188 Sum_probs=92.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC-CCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT-IPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|++++. ..++.+++|++|+|++|.+++.+|..+.. +++|++|++++|.+++. .|..++.+++|++|
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK-CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH-CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh-CCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 5799999999999976 78999999999999999999878887766 99999999999999863 45889999999999
Q ss_pred eecCccccCCCC---ccccCCccccEEeccc
Q 040267 135 YLSYNRLSGPLP---PQLSSLVRLKQFSVAY 162 (538)
Q Consensus 135 ~ls~N~l~g~~p---~~l~~l~~L~~l~l~~ 162 (538)
++++|.+++..+ ..+..+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999997655 5789999999999874
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.41 E-value=5e-13 Score=143.92 Aligned_cols=110 Identities=23% Similarity=0.202 Sum_probs=98.6
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..+++.|+|++|++++..|..|..+++|++|+|++|.+++..|..+.. +++|++|+|++|+++ .+|.. .+++|++|
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L 126 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF-NQDLEYLDVSHNRLQ-NISCC--PMASLRHL 126 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT-CTTCCEEECTTSCCC-EECSC--CCTTCSEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC-CCCCCEEECCCCcCC-ccCcc--ccccCCEE
Confidence 357999999999999888889999999999999999999777777766 999999999999998 78876 89999999
Q ss_pred eecCccccC-CCCccccCCccccEEecccccCCCC
Q 040267 135 YLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 135 ~ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
+|++|++++ .+|..|.++++|++|++++|.+++.
T Consensus 127 ~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~ 161 (562)
T 3a79_B 127 DLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL 161 (562)
T ss_dssp ECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT
T ss_pred ECCCCCccccCchHhhcccCcccEEecCCCccccC
Confidence 999999997 5678999999999999999999864
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.3e-13 Score=145.06 Aligned_cols=108 Identities=23% Similarity=0.252 Sum_probs=88.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|++++..|..+.. +++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKF-NQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTT-CTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhc-ccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 46888888888888777778888888888888888888666777766 888888888888887 67766 788888888
Q ss_pred ecCccccC-CCCccccCCccccEEecccccCCC
Q 040267 136 LSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 136 ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
|++|.+++ .+|..|+++++|++|++++|.+++
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch
Confidence 88888887 577888888888888888888876
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-13 Score=124.05 Aligned_cols=120 Identities=18% Similarity=0.183 Sum_probs=94.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCC-CCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCK-SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..++.|+|++|+++. +|. +..+. +|+.|+|++|.+++ + ..+.. +++|++|+|++|++++..|..+..+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRK-L-DGFPL-LRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCE-E-CCCCC-CSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCc-c-ccccc-CCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 358999999999984 454 55554 99999999999985 4 45555 8999999999999985444445899999999
Q ss_pred eecCccccCCCCc--cccCCccccEEecccccCCCCCCcc----cccccccccc
Q 040267 135 YLSYNRLSGPLPP--QLSSLVRLKQFSVAYNCLSGRIPSF----FNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~--~l~~l~~L~~l~l~~N~l~g~~p~~----~~~~~~l~~~ 182 (538)
+|++|+++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|..+
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEE
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCcccee
Confidence 99999996 6776 78899999999999999984 4553 6666666555
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.3e-13 Score=142.22 Aligned_cols=123 Identities=24% Similarity=0.202 Sum_probs=98.9
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC--cCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCC
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG--KIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYL 131 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L 131 (538)
..+++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+.. +++|++|+|++|.+++.+|.. +..+++|
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~-l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ-MKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT-CTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh-CCCCCEEECCCCcCCcccccchhccCccC
Confidence 3568999999999998889999999999999999999986 56666666 899999999999998767764 7788888
Q ss_pred cEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 132 ~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++|+|++|.+++.+|..+. ++|+.|++++|+++ .+|..+..+++|..
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~ 448 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQE 448 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCE
Confidence 8888888888877776664 67888888888888 66765555555543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.40 E-value=6e-13 Score=139.31 Aligned_cols=119 Identities=18% Similarity=0.155 Sum_probs=63.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccC--------------------
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN-------------------- 115 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N-------------------- 115 (538)
.+++.|+|++|++++..+..|..+++|+.|+|++|+..+.+|...+..+++|++|+|++|
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls 226 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMS 226 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECT
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECc
Confidence 467788888888776555555555555555555543333444433333445555555544
Q ss_pred --CCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 116 --DLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 116 --~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
.+++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+.
T Consensus 227 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp TSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred CCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 44444444455555555555555555544444555555555555555555544444333
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.39 E-value=4.2e-13 Score=143.57 Aligned_cols=132 Identities=25% Similarity=0.387 Sum_probs=98.4
Q ss_pred CCCCCCCCCCCCCCC-----ccccc-ccCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhh
Q 040267 29 LSSWSLTNSSVGFIC-----RFNGV-SCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102 (538)
Q Consensus 29 l~~W~~~~~~~~~~c-----~w~gv-~C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~ 102 (538)
+.+|..+ ..+| .|.|+ .|.. ++++.|+|++|+|++ +|..+ +++|+.|+|++|+|+ .+| .
T Consensus 33 l~~W~~~----~~~~~~~~~~~~~l~~C~~---~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip-~--- 97 (571)
T 3cvr_A 33 WDKWEKQ----ALPGENRNEAVSLLKECLI---NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP-E--- 97 (571)
T ss_dssp HHHHHTT----CCTTCCHHHHHHHHHHHHH---TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC-C---
T ss_pred HHHHhcc----CCccccccchhhhcccccc---CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc-c---
Confidence 4457532 3467 79999 7853 479999999999987 77766 378999999999998 788 2
Q ss_pred cCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 103 WFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 103 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
.+++|++|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|++++|.|++ +|..+.++..|.+.
T Consensus 98 ~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls 168 (571)
T 3cvr_A 98 LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVR 168 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECC
T ss_pred ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECC
Confidence 27889999999999986 777 655 88888888888886 776 56788888888888886 55544444444444
Q ss_pred cc
Q 040267 183 AD 184 (538)
Q Consensus 183 ~~ 184 (538)
+|
T Consensus 169 ~N 170 (571)
T 3cvr_A 169 NN 170 (571)
T ss_dssp SS
T ss_pred CC
Confidence 43
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-13 Score=150.37 Aligned_cols=120 Identities=20% Similarity=0.214 Sum_probs=97.1
Q ss_pred CCEEEEEcCCCCccccC-cccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCcc--CcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQV-PESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHE--LGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~ 132 (538)
.+++.|+|++|++.+.+ |..|+++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++.+|.. ++++++|+
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQG-LFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCS-CSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccC-CcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 46888888888777676 667888888888888888888777777766 888888888888888777765 88888888
Q ss_pred EeeecCccccCCCC-ccccCCccccEEecccccCCCCCCcccccc
Q 040267 133 TLYLSYNRLSGPLP-PQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176 (538)
Q Consensus 133 ~L~ls~N~l~g~~p-~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~ 176 (538)
+|+|++|.+++..| ..|.++++|+.|++++|.+++..|..+..+
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 88888888887654 568888888888888888888877776554
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.6e-13 Score=133.38 Aligned_cols=122 Identities=19% Similarity=0.082 Sum_probs=89.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++..+..++.+++|++|+|++|.+++..|..+...+++|++|+|++|.+++. | ....+++|++|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEE
Confidence 35777888888887777777778888888888888888666666654478888888888888744 3 334578888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|++++ +|+.+..+++|+.|++++|.+++ +|..+..+++|..
T Consensus 198 Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~ 241 (317)
T 3o53_A 198 LSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEH 241 (317)
T ss_dssp CCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCE
T ss_pred CCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCE
Confidence 88888884 55568888888888888888884 5665555544443
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.9e-13 Score=142.83 Aligned_cols=120 Identities=23% Similarity=0.210 Sum_probs=78.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC--cCChhHhhcCCCCcEEEcccCCCCCCCCcc-CcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG--KIPTQLCKWFPYLVSLDLSNNDLSGTIPHE-LGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 132 (538)
.+++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+.. +++|++|+|++|++++.+|.. +..+++|+
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKN-MSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTT-CTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcC-CCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 467888888888887778778888888888888888874 23344444 777888888888887656653 56666666
Q ss_pred EeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 133 TLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 133 ~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
+|+|++|++++.+|..+. ++|+.|++++|+++ .+|..+..+++|
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 666666666655554443 45666666666665 344433344333
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-12 Score=143.46 Aligned_cols=134 Identities=22% Similarity=0.270 Sum_probs=87.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcC----C----hhHhhcCCCCcEEEcccCCCCCCCCc-cCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKI----P----TQLCKWFPYLVSLDLSNNDLSGTIPH-ELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i----p----~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~ 126 (538)
.+++.|+|++|++++..|..|..+++|++|+|++|.+++.. | ..+.. +++|++|+|++|+++ .+|. .|.
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~-l~~L~~L~L~~N~l~-~i~~~~~~ 557 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG-LSHLHILNLESNGFD-EIPVEVFK 557 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT-CTTCCEEECCSSCCC-CCCTTTTT
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC-CCCCCEEECCCCCCC-CCCHHHcc
Confidence 35677777777777666666777777777777777776421 1 11333 677777777777777 4444 477
Q ss_pred CCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccc----ccccccccccccCCCCC
Q 040267 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN----GAMKMDMLADSRLGGAN 191 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~----~~~~l~~~~~~~l~~~~ 191 (538)
.+++|+.|+|++|++++..|..|.++++|+.|++++|+|++..|..+. ++..+.+.+|+..|.+.
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 777777888877777755555567777788888888877776665443 34445555666666543
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.9e-13 Score=134.43 Aligned_cols=115 Identities=19% Similarity=0.145 Sum_probs=60.5
Q ss_pred CEEEEEcCCCCccccCc----ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC--C--CccCcCC
Q 040267 57 RILSLELEEMNLSGQVP----ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT--I--PHELGNC 128 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~--~--p~~~~~l 128 (538)
+++.|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|++.+. + +..++.+
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRA-FPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCC-CTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhcc-CCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 45556666666655433 23345556666666666665444444433 56666666666665432 1 1223455
Q ss_pred CCCcEeeecCccccCCCCc----cccCCccccEEecccccCCCCCCccc
Q 040267 129 VYLNTLYLSYNRLSGPLPP----QLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 129 ~~L~~L~ls~N~l~g~~p~----~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
++|++|+|++|+++ .+|. .+..+++|++|+|++|.+++..|..+
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 56666666666665 2222 13455566666666666665555443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.9e-13 Score=143.06 Aligned_cols=112 Identities=22% Similarity=0.232 Sum_probs=61.9
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCC-------------------
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL------------------- 117 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l------------------- 117 (538)
+|+.|+|++|++++..|..|+.+++|++|+|++|.+++.+| +.. +++|++|+|++|.+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~-l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LES-LSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTT-CTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--ccc-CCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 35555555555555444455555555555555555554333 222 44444444444433
Q ss_pred CCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 118 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
++..+ ..+++|+.|+|++|.+++..|..+..+++|+.|+|++|.|++.+|..+.
T Consensus 112 ~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 112 SRVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp CCEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CCCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 32222 2345667777777777766666677777777777777777776665543
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.34 E-value=7.5e-13 Score=119.94 Aligned_cols=106 Identities=16% Similarity=0.228 Sum_probs=93.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc--cCcCCCCCcE
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH--ELGNCVYLNT 133 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 133 (538)
.+++.|+|++|++++. +.+..+++|+.|+|++|.++ .+|+.++..+++|++|+|++|+++ .+|. .+..+++|+.
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 3699999999999975 67999999999999999999 566555334999999999999996 6776 8999999999
Q ss_pred eeecCccccCCCCcc----ccCCccccEEecccccCC
Q 040267 134 LYLSYNRLSGPLPPQ----LSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 134 L~ls~N~l~g~~p~~----l~~l~~L~~l~l~~N~l~ 166 (538)
|+|++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 118 L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 118 LCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999 57775 899999999999999775
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.7e-12 Score=130.02 Aligned_cols=113 Identities=25% Similarity=0.308 Sum_probs=87.6
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|++++|++++ +|..+. ++|+.|+|++|.+++..|..+.. +++|+.|+|++|++++..|..+..+++|+.|+|
T Consensus 173 ~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 248 (332)
T 2ft3_A 173 KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHL 248 (332)
T ss_dssp CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTT-CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcC-CCCCCEEECCCCcCCcCChhHhhCCCCCCEEEC
Confidence 57788888888875 555443 67888888888888666566665 788888888888888776767888888888888
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
++|+++ .+|..+..+++|+.|++++|.+++..+..|.
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 888888 6788888888888888888888866555554
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.4e-12 Score=125.51 Aligned_cols=116 Identities=30% Similarity=0.400 Sum_probs=89.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ +..+++|+.|+|++|.+++ +|. +.. +++|++|+|++|++++ + ..+..+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~-l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hcc-CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 468888999988886544 8888888888888888884 443 555 8888888888888875 3 4678888888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++. ..+..+++|+.|++++|.+++..| +..+++|..+
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 888888864 568888888888888888887554 5555555443
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-12 Score=124.77 Aligned_cols=112 Identities=16% Similarity=0.156 Sum_probs=93.1
Q ss_pred CCEEEEEcCCCC-ccccCcccccCCCCCCeEEccC-CcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCc-
Q 040267 56 NRILSLELEEMN-LSGQVPESLQSCKSLQVLNLST-NNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN- 132 (538)
Q Consensus 56 ~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 132 (538)
.+++.|+|++|+ +++..+..|..+++|++|+|++ |.++ .+|...+..+++|++|+|++|.+++ +|. ++.+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 568999999997 8876667899999999999998 9998 5554433348999999999999985 776 88888888
Q ss_pred --EeeecCc-cccCCCCccccCCcccc-EEecccccCCCCCCc
Q 040267 133 --TLYLSYN-RLSGPLPPQLSSLVRLK-QFSVAYNCLSGRIPS 171 (538)
Q Consensus 133 --~L~ls~N-~l~g~~p~~l~~l~~L~-~l~l~~N~l~g~~p~ 171 (538)
+|++++| .+++..+..|.++++|+ .|++++|.++ .+|.
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~ 173 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQG 173 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCH
Confidence 9999999 89876666788999999 9999999998 4554
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=6.3e-12 Score=125.75 Aligned_cols=114 Identities=24% Similarity=0.275 Sum_probs=100.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|++++|+++. +|..+. ++|+.|+|++|.+++..|..+.. +++|++|+|++|.+++..|..+..+++|++|+
T Consensus 171 ~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 171 KKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKG-LNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp TTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTT-CTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred CCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcC-CCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 468999999999984 665554 89999999999999777777776 99999999999999988788899999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~ 174 (538)
|++|.++ .+|..+..+++|+.|++++|++++..+..|.
T Consensus 247 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred CCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 9999999 7999999999999999999999987666664
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.3e-12 Score=114.13 Aligned_cols=104 Identities=25% Similarity=0.280 Sum_probs=86.3
Q ss_pred CCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcc
Q 040267 42 ICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLS 113 (538)
Q Consensus 42 ~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls 113 (538)
.|...-+.|.+. ....++.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|...+..+++|++|+|+
T Consensus 11 ~C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 11 SCDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp EECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred EECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECC
Confidence 355566777642 2357899999999999998999999999999999999999 4666654449999999999
Q ss_pred cCCCCCCCCccCcCCCCCcEeeecCccccCCCCc
Q 040267 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPP 147 (538)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 147 (538)
+|+|++..+..|..+++|++|+|++|.+.. .|.
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~ 122 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECR 122 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCT-TBG
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCccc-ccc
Confidence 999996555569999999999999999994 443
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.30 E-value=6.7e-13 Score=132.23 Aligned_cols=121 Identities=25% Similarity=0.348 Sum_probs=104.6
Q ss_pred CCEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
.+++.|+|++|.+++..+..+. .+++|++|+|++|.+++ +|... . +++|++|+|++|+++ .+|..+..+++|+.|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~-~-l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 219 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQV-V-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWI 219 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EECCC-C-CTTCCEEECCSSCCC-EECGGGGGGTTCSEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccccc-c-cccCCEEECCCCcCC-cchhhhcccCcccEE
Confidence 5799999999999988887774 79999999999999994 45433 3 899999999999999 466679999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCC-CCCCccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS-GRIPSFFNGAMKMDM 181 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~-g~~p~~~~~~~~l~~ 181 (538)
+|++|+++ .+|..+..+++|+.|++++|.++ +.+|.++..++.+..
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~ 266 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQT 266 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHH
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceE
Confidence 99999999 58989999999999999999999 777777776665543
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.6e-12 Score=122.02 Aligned_cols=103 Identities=23% Similarity=0.275 Sum_probs=65.8
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ +..+++|+.|+|++|++++ +|... .++|++|+|++|++++ +| .+..+++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~---~~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP---SACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC---CSSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc---cCcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 356677777777765433 6667777777777777763 44321 1667777777777764 33 466677777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
|++|++++ +| .+..+++|+.|++++|.+++.
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch
Confidence 77777764 33 466677777777777777654
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-14 Score=132.87 Aligned_cols=121 Identities=23% Similarity=0.277 Sum_probs=100.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+.. +++|++|+|++|++++ +| .+..+++|++|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~-~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV-ADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH-HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc-CCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 468999999999987 66 8889999999999999998 78887665 7899999999999985 55 688899999999
Q ss_pred ecCccccCCCC--ccccCCccccEEecccccCCCCCCcc----------ccccccccccc
Q 040267 136 LSYNRLSGPLP--PQLSSLVRLKQFSVAYNCLSGRIPSF----------FNGAMKMDMLA 183 (538)
Q Consensus 136 ls~N~l~g~~p--~~l~~l~~L~~l~l~~N~l~g~~p~~----------~~~~~~l~~~~ 183 (538)
|++|++++ +| ..+..+++|++|++++|.+++.+|.. +..+++|..++
T Consensus 122 l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 122 MSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp ESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred CCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 99999985 43 47889999999999999998876652 55666676664
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.5e-14 Score=132.39 Aligned_cols=121 Identities=26% Similarity=0.365 Sum_probs=101.7
Q ss_pred CCEEEEEcCCCCccccCcc------cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCC
Q 040267 56 NRILSLELEEMNLSGQVPE------SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCV 129 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 129 (538)
.+++.++|+.+.++|.+|. .+..+++|++|+|++|.+++ +| .+.. +++|++|+|++|.++ .+|..+..++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~-l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSG-MENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHH-HTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-cccc-CCCCCEEECCCCCcc-cccchhhcCC
Confidence 3567778888888888776 89999999999999999995 88 7776 999999999999998 7898888889
Q ss_pred CCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC-cccccccccccc
Q 040267 130 YLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 130 ~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
+|++|+|++|++++ +| .+..+++|+.|++++|.+++..+ ..+..+++|..+
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 99999999999996 66 68899999999999999986432 345555555443
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=8.1e-12 Score=123.83 Aligned_cols=114 Identities=25% Similarity=0.469 Sum_probs=77.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..+ +..+++|++|+|++|.+++ +| .+.. +++|++|+|++|++++ +|. +..+++|++|+
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~-l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAG-LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTT-CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcC-CCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 457778888887775433 7777888888888888773 44 4444 7778888888887774 443 77777777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.+++ +|. +..+++|+.|++++|.+++..+ +..+++|.
T Consensus 136 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~ 176 (308)
T 1h6u_A 136 LDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLT 176 (308)
T ss_dssp CCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCC
T ss_pred CCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh--hcCCCCCC
Confidence 77777775 333 6777777777777777775433 44444443
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=9.9e-12 Score=123.18 Aligned_cols=115 Identities=22% Similarity=0.319 Sum_probs=91.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++. + .+..+++|+.|+|++|.+++ +|. +.. +++|++|+|++|.+++. |. ++.+++|+.|+
T Consensus 85 ~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~-l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 157 (308)
T 1h6u_A 85 TKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAG-LSNLQVLYLDLNQITNI-SP-LAGLTNLQYLS 157 (308)
T ss_dssp CSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTT-CTTCCEEECCSSCCCCC-GG-GGGCTTCCEEE
T ss_pred CCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcC-CCCCCEEECCCCccCcC-cc-ccCCCCccEEE
Confidence 5789999999999863 3 68899999999999999984 554 555 89999999999999854 43 88899999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.+++ +|. +..+++|+.|++++|.+++..+ +..+++|..
T Consensus 158 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 199 (308)
T 1h6u_A 158 IGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIE 199 (308)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred ccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCE
Confidence 99999985 544 8888999999999999986544 455544443
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=121.33 Aligned_cols=116 Identities=30% Similarity=0.435 Sum_probs=97.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++ +| .+..+++|++|+|++|.+++ ++ .+.. +++|++|+|++|++++. ..++.+++|+.|+
T Consensus 90 ~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~~-~l~~-l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp TTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-CG-GGGG-CTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-Ch-hhcC-CCCCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 579999999999986 33 49999999999999999995 44 5665 99999999999999864 6799999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++..| +..+++|+.|++++|.+++ +|. +..+++|..+
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L 205 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVL 205 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEE
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEE
Confidence 99999997544 9999999999999999986 443 5555555443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=118.88 Aligned_cols=115 Identities=22% Similarity=0.295 Sum_probs=95.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+++ .+| .+..+++|+.|+|++|.+++ +|. +.. +++|++|+|++|++++ +|.... ++|+.|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~-l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~ 112 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKD-LTKLEELSVNRNRLKN-LNGIPS--ACLSRLF 112 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTT-CSSCCEEECCSSCCSC-CTTCCC--SSCCEEE
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hcc-CCCCCEEECCCCccCC-cCcccc--CcccEEE
Confidence 46899999999998 455 68999999999999999995 555 665 9999999999999985 565333 9999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++ +| .+..+++|+.|++++|++++. | .+..+++|..+
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L 155 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVL 155 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEE
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEE
Confidence 99999996 44 599999999999999999975 4 46656555543
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.26 E-value=9e-12 Score=134.62 Aligned_cols=114 Identities=30% Similarity=0.401 Sum_probs=74.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+|+.|+|++|+|++..| +..+++|+.|+|++|.|++ +| .+.. +++|+.|+|++|.+++ + +.+..|++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhcc-CCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 457777777777776444 6777777777777777763 44 4444 6777777777777764 3 3466677777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|.+++. ..+..+++|+.|+|++|.|++..| +..+++|.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 178 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 178 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCC
Confidence 777777753 456667777777777777776555 44444443
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.9e-11 Score=132.14 Aligned_cols=115 Identities=30% Similarity=0.406 Sum_probs=96.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+|+.|+|++|.|++ +| .+..+++|+.|+|++|.|++ +| .+.. +++|+.|+|++|.+++. ..++.|++|+.|+
T Consensus 87 ~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp TTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGG-CTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccC-CCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 579999999999986 33 78999999999999999995 54 4666 99999999999999864 6789999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
|++|.|++..| +..+++|+.|+|++|.|++. | .+..+++|..
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~ 201 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDV 201 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSE
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCE
Confidence 99999997655 89999999999999999874 4 3555555543
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.24 E-value=8e-12 Score=126.19 Aligned_cols=135 Identities=15% Similarity=0.121 Sum_probs=99.8
Q ss_pred CCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcE-EEc
Q 040267 42 ICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVS-LDL 112 (538)
Q Consensus 42 ~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~-L~L 112 (538)
-|.|..|.|.+. .+..++.|+|++|+|+...+..|.++++|++|+|++|.+.+.+|...+..+++|.. +.+
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 478888999642 23468889999999986555678889999999999999887888766555777664 667
Q ss_pred ccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEeccc-ccCCCCCCcccccc
Q 040267 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAY-NCLSGRIPSFFNGA 176 (538)
Q Consensus 113 s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~-N~l~g~~p~~~~~~ 176 (538)
++|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |.+....+..|..+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 77888877777888899999999999999876666666666777777765 44554333444433
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-11 Score=124.09 Aligned_cols=114 Identities=18% Similarity=0.298 Sum_probs=57.7
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|++++|.+++..+ +..+++|+.|+|++|.+++ +|. +.. +++|++|++++|.+++ + ..+..+++|++|++
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~-l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LAN-LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTT-CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhc-CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 45555555555554333 4555555555555555552 332 333 5555555555555543 2 23555555555555
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l 179 (538)
++|.+++ + +.+..+++|+.|++++|.+++..|..+..+++|
T Consensus 273 ~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 273 GSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred cCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 5555553 2 234555555555555555555544444444333
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-11 Score=133.09 Aligned_cols=101 Identities=27% Similarity=0.292 Sum_probs=89.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCC-CccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTI-PHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L 134 (538)
.+++.|+|++|+|+ .+|..|+.+++|+.|+|++|.|++ +| .+.. +++|++|+|++|+|++.. |..++.+++|+.|
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~-l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVAN-LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTT-CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCC-CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 46999999999999 889999999999999999999995 88 7776 999999999999999877 9999999999999
Q ss_pred eecCccccCCCCcc---ccCCccccEEec
Q 040267 135 YLSYNRLSGPLPPQ---LSSLVRLKQFSV 160 (538)
Q Consensus 135 ~ls~N~l~g~~p~~---l~~l~~L~~l~l 160 (538)
+|++|.|++..|.. +..+++|+.|++
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999999765532 234788888864
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.22 E-value=7.1e-12 Score=134.09 Aligned_cols=107 Identities=26% Similarity=0.291 Sum_probs=73.0
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. . +++|++|+|++|+|++ +|. +. ++|+.|+|
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~-l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~L 187 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---L-PTSLEVLSVRNNQLTF-LPE-LP--ESLEALDV 187 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---C-CTTCCEEECCSSCCSC-CCC-CC--TTCCEEEC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---c-CCCcCEEECCCCCCCC-cch-hh--CCCCEEEC
Confidence 56667777777765 554 56778888888888874 665 2 6778888888888875 776 55 77888888
Q ss_pred cCccccCCCCccccCCccc-------cEEecccccCCCCCCccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRL-------KQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L-------~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++|+|+ .+|. +.. +| +.|+|++|.|+ .+|..+..+++|..
T Consensus 188 s~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 188 STNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp CSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred cCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 888887 5666 544 66 77777777777 46665554554443
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.8e-11 Score=127.09 Aligned_cols=114 Identities=26% Similarity=0.376 Sum_probs=73.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++..| +..+++|+.|+|++|.+++. |. +.. +++|+.|+|++|++++..| ++.+++|+.|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~-l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAG-LTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTT-CTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccC-CCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 357777777777776544 67777777777777777743 33 444 6777777777777765333 66677777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..| +..+++|+.|++++|.+++. ..+..+++|.
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 356 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNIN 356 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCC
Confidence 77777775444 56666777777777776654 2344444433
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.19 E-value=6.1e-11 Score=124.10 Aligned_cols=99 Identities=21% Similarity=0.251 Sum_probs=58.8
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|+|++|++++. | .++.+++|++|+|++|++++ +| +.. +++|++|+|++|.+++ +| ++.+++|++|+|
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~-l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQ-NTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTT-CTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--ccc-CCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 456666666666643 3 45666666666666666664 33 333 6666666666666664 23 556666666666
Q ss_pred cCccccCCCCccccCCccccEEecccccCCC
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
++|++++ +| +..+++|+.|++++|.+++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 6666664 33 5566666666666666665
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.18 E-value=7.6e-11 Score=123.28 Aligned_cols=111 Identities=25% Similarity=0.403 Sum_probs=77.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++ +| +++++++|++|++++|++++ +|.. .++|++|++++|++++ +| .++.+++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 467788888888875 66 58888888888888888874 6643 4568888888888875 66 577888888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
+++|++++ +|... ++|+.|++++|.++ .+|. +..+++|..
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~ 241 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTT 241 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCE
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCE
Confidence 88888775 55432 36677777777776 5553 445444443
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-11 Score=121.76 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=86.1
Q ss_pred CeEEccCC-cCCCcCChhHhhcCCCCcEEEccc-CCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEec
Q 040267 83 QVLNLSTN-NLFGKIPTQLCKWFPYLVSLDLSN-NDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160 (538)
Q Consensus 83 ~~L~Ls~N-~l~g~ip~~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l 160 (538)
..+++++| +|+ .||. +.. +++|+.|+|++ |+|++..|..|+.|++|+.|+|++|+|++..|..|.+|++|+.|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~-~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPG-AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCS-CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCC-CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 45799998 898 6998 776 89999999996 9999877789999999999999999999988999999999999999
Q ss_pred ccccCCCCCCcccccc--ccccccccccCC
Q 040267 161 AYNCLSGRIPSFFNGA--MKMDMLADSRLG 188 (538)
Q Consensus 161 ~~N~l~g~~p~~~~~~--~~l~~~~~~~l~ 188 (538)
++|+|++..+..|..+ ..|.+.+|..-|
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccC
Confidence 9999998777666553 333333444333
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-12 Score=128.64 Aligned_cols=107 Identities=23% Similarity=0.327 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCCcccc-CcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccC-CCCC-CCCccCcCCCCCc
Q 040267 56 NRILSLELEEMNLSGQ-VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNN-DLSG-TIPHELGNCVYLN 132 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N-~l~g-~~p~~~~~l~~L~ 132 (538)
.+++.|+|++|++++. +|..+..+++|++|+|++|.+++..|..+.. +++|++|+|++| .+++ .+|..+..+++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT-CTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc-CCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 3466666666666654 5556666666666666666666556655555 666666666666 4554 2454555566666
Q ss_pred EeeecCc-cccCC-CCccccCCc-cccEEecccc
Q 040267 133 TLYLSYN-RLSGP-LPPQLSSLV-RLKQFSVAYN 163 (538)
Q Consensus 133 ~L~ls~N-~l~g~-~p~~l~~l~-~L~~l~l~~N 163 (538)
+|+|++| .+++. +|..+..++ +|+.|++++|
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 6666666 65543 445555555 6666666666
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=122.11 Aligned_cols=100 Identities=19% Similarity=0.203 Sum_probs=60.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++. + ++.+++|++|++++|...+.++ +.. +++|++|++++|++++ +| ++.+++|+.|+
T Consensus 127 ~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--~~~-l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~ 197 (457)
T 3bz5_A 127 PLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--VTP-QTQLTTLDCSFNKITE-LD--VSQNKLLNRLN 197 (457)
T ss_dssp TTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--CTT-CTTCCEEECCSSCCCC-CC--CTTCTTCCEEE
T ss_pred CcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc--ccc-CCcCCEEECCCCccce-ec--cccCCCCCEEE
Confidence 4677788888887763 2 6666666666666665555553 333 5666666666666664 44 55556666666
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
+++|++++. .+..+++|+.|++++|++++
T Consensus 198 l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 198 CDTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CCSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred CcCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 666666542 25555566666666666655
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.15 E-value=7.6e-11 Score=123.78 Aligned_cols=114 Identities=26% Similarity=0.354 Sum_probs=94.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++. +.+..+++|+.|+|++|.+++..| +.. +++|+.|++++|.+++. |. +..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~-l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG-LTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT-CTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc-CCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 5689999999999864 468889999999999999996554 555 89999999999999864 43 88999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
|++|++++..| +..+++|+.|++++|++++..| +..+++|.
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 99999997444 8889999999999999998766 44444443
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-12 Score=130.58 Aligned_cols=125 Identities=20% Similarity=0.181 Sum_probs=103.5
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCc-CChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGK-IPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
..++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+.. +++|++|+|++|.+++..|..++.+++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~-~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQ-CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTT-BCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhh-CCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 5689999999999977665 56799999999999999866 7777666 8999999999999998888889999999999
Q ss_pred eecCc-cccCC-CCccccCCccccEEecccc-cCCCC-CCccccccc-ccccc
Q 040267 135 YLSYN-RLSGP-LPPQLSSLVRLKQFSVAYN-CLSGR-IPSFFNGAM-KMDML 182 (538)
Q Consensus 135 ~ls~N-~l~g~-~p~~l~~l~~L~~l~l~~N-~l~g~-~p~~~~~~~-~l~~~ 182 (538)
+|++| .+++. +|..+.++++|+.|++++| .+++. ++..+..++ +|..+
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L 200 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL 200 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEE
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEE
Confidence 99999 68763 6777888999999999999 88864 565555555 54443
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.13 E-value=9e-11 Score=118.03 Aligned_cols=114 Identities=25% Similarity=0.359 Sum_probs=80.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|++++|.+++..+ +..+++|+.|++++|.+++..+ +.. +++|++|++++|.+++ +|. +..+++|++|+
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~-~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VAN-MTRLNSLKIGNNKITD-LSP-LANLSQLTWLE 249 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGG-CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhc-CCcCCEEEccCCccCC-Ccc-hhcCCCCCEEE
Confidence 457788888888775433 7778888888888888874433 444 7888888888888874 343 77788888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+++|.+++ + +.+..+++|+.|++++|.+++. | .+..+++|.
T Consensus 250 l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~ 290 (347)
T 4fmz_A 250 IGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLN 290 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCS
T ss_pred CCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCC
Confidence 88888875 3 4577788888888888888764 3 344444443
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.11 E-value=7.8e-11 Score=123.21 Aligned_cols=109 Identities=33% Similarity=0.483 Sum_probs=74.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCC--cCChhH-------------hhcCCCCcEEEcccCCCCCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFG--KIPTQL-------------CKWFPYLVSLDLSNNDLSGT 120 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~-------------~~~l~~L~~L~Ls~N~l~g~ 120 (538)
.+++.|++++|.+++ +|.. +++|+.|+|++|.+++ .+|..+ ....++|++|++++|++++
T Consensus 257 ~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 257 PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-
T ss_pred cccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-
Confidence 356666666666664 4432 2555666666665554 233221 1112578889999998885
Q ss_pred CCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC--CCCcccccc
Q 040267 121 IPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG--RIPSFFNGA 176 (538)
Q Consensus 121 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g--~~p~~~~~~ 176 (538)
+|.. +++|++|++++|+++ .+|. .+++|+.|++++|++++ .+|..+..+
T Consensus 332 lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L 382 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL 382 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh
Confidence 6754 578999999999998 5777 46889999999999998 778777655
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=126.46 Aligned_cols=115 Identities=28% Similarity=0.355 Sum_probs=67.3
Q ss_pred CCCCCCCCCCCCCCCcccccc--------cCCCCCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhH
Q 040267 29 LSSWSLTNSSVGFICRFNGVS--------CWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100 (538)
Q Consensus 29 l~~W~~~~~~~~~~c~w~gv~--------C~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~ 100 (538)
.++|... ..+|.|.|.. |.. ..++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|.
T Consensus 12 w~~W~~~----~~~~~~~~r~~~~~~~~~c~~---~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~-- 78 (622)
T 3g06_A 12 WSAWRRA----APAEESRGRAAVVQKMRACLN---NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-- 78 (622)
T ss_dssp HHHHHHT----CCGGGHHHHHHHHHHHHHHHH---HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC--
T ss_pred HHHHHhc----CCcchhccccccCcccccccC---CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC--
Confidence 3457542 3478887642 321 24677777777776 5665554 56777777777766 5655
Q ss_pred hhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCC
Q 040267 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 101 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~ 166 (538)
. +++|++|+|++|+++ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+++
T Consensus 79 -~-l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~ 134 (622)
T 3g06_A 79 -L-PPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT 134 (622)
T ss_dssp -C-CTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS
T ss_pred -c-CCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC
Confidence 2 566777777777766 4554 45666666666666663 443 2344444555554444
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.09 E-value=4.1e-12 Score=130.09 Aligned_cols=123 Identities=18% Similarity=0.239 Sum_probs=62.3
Q ss_pred CEEEEEcCCCCccc----cCcccccCCCCCCeEEccCCcCCCcCChhHhhc---C---------CCCcEEEcccCCCC-C
Q 040267 57 RILSLELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW---F---------PYLVSLDLSNNDLS-G 119 (538)
Q Consensus 57 ~l~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~---l---------~~L~~L~Ls~N~l~-g 119 (538)
+++.|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+... + ++|++|+|++|+++ +
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~ 174 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 174 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH
Confidence 45556666665555 345555555556666666555543322222221 2 55556666666554 3
Q ss_pred CCC---ccCcCCCCCcEeeecCcccc--C---CCCccccCCccccEEecccccCC----CCCCccccccccc
Q 040267 120 TIP---HELGNCVYLNTLYLSYNRLS--G---PLPPQLSSLVRLKQFSVAYNCLS----GRIPSFFNGAMKM 179 (538)
Q Consensus 120 ~~p---~~~~~l~~L~~L~ls~N~l~--g---~~p~~l~~l~~L~~l~l~~N~l~----g~~p~~~~~~~~l 179 (538)
.+| ..+..+++|++|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|
T Consensus 175 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L 246 (386)
T 2ca6_A 175 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246 (386)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTC
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCc
Confidence 333 23445555666666666555 2 22334555556666666666554 3444444444333
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.09 E-value=8.2e-11 Score=127.35 Aligned_cols=88 Identities=27% Similarity=0.249 Sum_probs=49.6
Q ss_pred CCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEe
Q 040267 80 KSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFS 159 (538)
Q Consensus 80 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~ 159 (538)
++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp~----~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LPV----LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 290 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEE
T ss_pred CCCCEEEccCCccCc-CCC----CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEE
Confidence 445555555555552 441 2455566666666555 4444 4455666666666666 5566666666666666
Q ss_pred cccccCCCCCCccccccc
Q 040267 160 VAYNCLSGRIPSFFNGAM 177 (538)
Q Consensus 160 l~~N~l~g~~p~~~~~~~ 177 (538)
|++|.+++.+|..+..+.
T Consensus 291 L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 291 LEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSCCCCHHHHHHHHHHH
T ss_pred ecCCCCCCcCHHHHHhcc
Confidence 666666665555544443
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.4e-11 Score=126.14 Aligned_cols=126 Identities=20% Similarity=0.246 Sum_probs=103.8
Q ss_pred CCEEEEEcCCCCcc-ccCc---ccccCCCCCCeEEccCCcCC--C---cCChhHhhcCCCCcEEEcccCCCC----CCCC
Q 040267 56 NRILSLELEEMNLS-GQVP---ESLQSCKSLQVLNLSTNNLF--G---KIPTQLCKWFPYLVSLDLSNNDLS----GTIP 122 (538)
Q Consensus 56 ~~l~~L~L~~n~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~--g---~ip~~~~~~l~~L~~L~Ls~N~l~----g~~p 122 (538)
.+++.|+|++|+++ +.+| ..+..+++|+.|+|++|.++ | .+|..+.. +++|++|+|++|.++ +.+|
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~-~~~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAY-CQELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGG-CTTCCEEECCSSCCHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhc-CCCccEEECcCCCCCcHHHHHHH
Confidence 67999999999998 4555 57788999999999999998 3 23435555 899999999999996 6788
Q ss_pred ccCcCCCCCcEeeecCccccCC----CCcccc--CCccccEEecccccCCC----CCCccc-ccccccccc
Q 040267 123 HELGNCVYLNTLYLSYNRLSGP----LPPQLS--SLVRLKQFSVAYNCLSG----RIPSFF-NGAMKMDML 182 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~----~p~~l~--~l~~L~~l~l~~N~l~g----~~p~~~-~~~~~l~~~ 182 (538)
..+..+++|+.|+|++|.+++. +|..+. .+++|+.|+|++|.+++ .+|..+ .++++|..+
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L 308 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFL 308 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEE
Confidence 8999999999999999999976 577774 48999999999999998 477665 445555544
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.06 E-value=3.3e-11 Score=122.20 Aligned_cols=111 Identities=26% Similarity=0.258 Sum_probs=68.9
Q ss_pred CEEEEEcCCCCccccCc----ccccCCC-CCCeEEccCCcCCCcCChhHhhcC-----CCCcEEEcccCCCCCCCCccCc
Q 040267 57 RILSLELEEMNLSGQVP----ESLQSCK-SLQVLNLSTNNLFGKIPTQLCKWF-----PYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.++.|+|++|++++..+ ..+..++ +|++|+|++|.+++..+..+.. + ++|++|+|++|.+++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~-~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ-ILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH-HHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH-HHhccCCCccEEECcCCcCChHHHHHHH
Confidence 46777777777766555 5566666 6777777777776555555544 3 6677777777777655554333
Q ss_pred ----CC-CCCcEeeecCccccCCCCcccc----C-CccccEEecccccCCCC
Q 040267 127 ----NC-VYLNTLYLSYNRLSGPLPPQLS----S-LVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 127 ----~l-~~L~~L~ls~N~l~g~~p~~l~----~-l~~L~~l~l~~N~l~g~ 168 (538)
.+ ++|++|+|++|.+++..+..+. . .++|+.|++++|.+++.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 33 6677777777777655444332 2 24677777777776643
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.7e-10 Score=116.37 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=95.3
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc-cCcCCCCCcE-eeec
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH-ELGNCVYLNT-LYLS 137 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~-L~ls 137 (538)
.++-++++|+ .+|..+ .++|+.|+|++|+|+ .||...+..+++|++|+|++|++.+.+|. .|.++++|.. +.++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 5778899998 778766 468999999999999 78876555599999999999999877775 5788988765 6778
Q ss_pred CccccCCCCccccCCccccEEecccccCCCCCCcccccccc
Q 040267 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMK 178 (538)
Q Consensus 138 ~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 178 (538)
+|+++...|..|..+++|++|++++|.+++..+..+....+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 129 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 129 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSS
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccch
Confidence 89999877889999999999999999999776655544433
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-11 Score=120.33 Aligned_cols=113 Identities=27% Similarity=0.263 Sum_probs=95.5
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCC----hhHhhcCC-CCcEEEcccCCCCCCCCccCcCC-----C
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIP----TQLCKWFP-YLVSLDLSNNDLSGTIPHELGNC-----V 129 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip----~~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~ 129 (538)
.++|+.|+++|.+|..+...++|++|+|++|.+++..+ ..+.. ++ +|++|+|++|.+++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~-~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFAN-TPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHT-CCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHh-CCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 46899999999999988888889999999999996555 44444 77 89999999999998878777765 9
Q ss_pred CCcEeeecCccccCCCCccccC----C-ccccEEecccccCCCCCCccc
Q 040267 130 YLNTLYLSYNRLSGPLPPQLSS----L-VRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 130 ~L~~L~ls~N~l~g~~p~~l~~----l-~~L~~l~l~~N~l~g~~p~~~ 173 (538)
+|++|+|++|.+++..+..+.. + ++|+.|++++|.+++..+..+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 129 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF 129 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH
Confidence 9999999999999877765544 4 899999999999998766554
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5.2e-10 Score=107.86 Aligned_cols=137 Identities=15% Similarity=0.021 Sum_probs=101.2
Q ss_pred HHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCC-CCCC-----------cccE
Q 040267 275 LIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLK-HPNL-----------EKPL 341 (538)
Q Consensus 275 l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-H~ni-----------~~~l 341 (538)
+....++|.....++.|+.+.||++.. +++.+++|...... .....+.+|+++++.+. |..+ ..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 334455677777788888899999985 46899999986422 22346889999998885 3333 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC------------------------------------ 385 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------ 385 (538)
||||++|.+|.+.+. +......++.+++++|+.||+.
T Consensus 88 v~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 999999999987632 1123457889999999999981
Q ss_pred --------------------CCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 386 --------------------CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 386 --------------------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
....++|+|++|.||+++++..+.|+||+.+...
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 0144899999999999987656679999886543
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.97 E-value=4e-11 Score=115.21 Aligned_cols=142 Identities=20% Similarity=0.167 Sum_probs=96.6
Q ss_pred CCCcccccccCCCCCCCEEEEEcCC---CCccccCccc------------------------ccCCCCCCe--EEccCCc
Q 040267 41 FICRFNGVSCWNGLENRILSLELEE---MNLSGQVPES------------------------LQSCKSLQV--LNLSTNN 91 (538)
Q Consensus 41 ~~c~w~gv~C~~~~~~~l~~L~L~~---n~l~g~~p~~------------------------~~~l~~L~~--L~Ls~N~ 91 (538)
..|+|.|+.|+.+ ..+|+.+...+ ..+.|.++++ |...+.|.. ++++.|.
T Consensus 76 ~l~~~~g~i~~~~-~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 76 ALKAVNYKILDRE-NRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHHTTSSCBCTT-SCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHHhcCcEEECCC-CCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 4689999999753 24666665544 2334444321 222333443 5667774
Q ss_pred CCCcCChh---HhhcCCCCcEEEcccCCCCC--CCCccCcCCCCCcEeeecCccccCCCCccccCCc--cccEEeccccc
Q 040267 92 LFGKIPTQ---LCKWFPYLVSLDLSNNDLSG--TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLV--RLKQFSVAYNC 164 (538)
Q Consensus 92 l~g~ip~~---~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~--~L~~l~l~~N~ 164 (538)
.. .++.. +...+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 33 33322 22348999999999999997 5667778999999999999999974 3344454 89999999999
Q ss_pred CCCCCCc-------ccccccccccccccc
Q 040267 165 LSGRIPS-------FFNGAMKMDMLADSR 186 (538)
Q Consensus 165 l~g~~p~-------~~~~~~~l~~~~~~~ 186 (538)
+++.+|. .+..+++|..++...
T Consensus 232 l~~~~~~~~~y~~~il~~~P~L~~LDg~~ 260 (267)
T 3rw6_A 232 LCDTFRDQSTYISAIRERFPKLLRLDGHE 260 (267)
T ss_dssp TGGGCSSHHHHHHHHHHHCTTCCEESSCB
T ss_pred CccccCcchhHHHHHHHHCcccCeECCcC
Confidence 9988773 245667777776544
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.95 E-value=3.2e-10 Score=108.90 Aligned_cols=119 Identities=13% Similarity=0.074 Sum_probs=88.0
Q ss_pred eecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-------------cccEEEeecCCCCHHHHh
Q 040267 289 VSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------------EKPLVYKYMSNGTLYSLL 355 (538)
Q Consensus 289 g~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~e~~~~gsL~~~l 355 (538)
+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.++ ..++||||++|.+|. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 355668999998777888999997653 22457789999888865454 237999999998884 2
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------------
Q 040267 356 HSNGNTALDWPSRLRIGLGAARGLSWLHHCC------------------------------------------------- 386 (538)
Q Consensus 356 ~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------------------- 386 (538)
.. .+ ...++.++++.|+.||+..
T Consensus 105 ~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (264)
T 1nd4_A 105 SH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKA 176 (264)
T ss_dssp SC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHH
T ss_pred Cc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHH
Confidence 11 12 2367788888888888721
Q ss_pred ------CCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 387 ------HPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 387 ------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
...++|+|++|.||+++++..+.|.||+.+...
T Consensus 177 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 177 RMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp TCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred hcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 112999999999999987766779999997654
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.86 E-value=1.2e-10 Score=121.77 Aligned_cols=127 Identities=21% Similarity=0.186 Sum_probs=97.4
Q ss_pred CCEEEEEcCCCCcccc----CcccccCCCCCCeEEccCCcCCCcCChhHhhc----CCCCcEEEcccCCCCCC----CCc
Q 040267 56 NRILSLELEEMNLSGQ----VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKW----FPYLVSLDLSNNDLSGT----IPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~----l~~L~~L~Ls~N~l~g~----~p~ 123 (538)
.+++.|+|++|++++. ++..+..+++|++|+|++|.+++..+..+... .++|++|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5799999999999865 67778889999999999999876555444431 26899999999998865 566
Q ss_pred cCcCCCCCcEeeecCccccCCCCccccC-----CccccEEecccccCCC----CCCcccccccccccc
Q 040267 124 ELGNCVYLNTLYLSYNRLSGPLPPQLSS-----LVRLKQFSVAYNCLSG----RIPSFFNGAMKMDML 182 (538)
Q Consensus 124 ~~~~l~~L~~L~ls~N~l~g~~p~~l~~-----l~~L~~l~l~~N~l~g----~~p~~~~~~~~l~~~ 182 (538)
.+..+++|++|+|++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..+++|..+
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL 403 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEE
Confidence 6778899999999999988655554442 6789999999999886 667666555555443
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.86 E-value=7.3e-11 Score=123.47 Aligned_cols=117 Identities=18% Similarity=0.154 Sum_probs=93.9
Q ss_pred CCEEEEEcCCCCccccC-----cccccCCCCCCeEEccCCcCCCc----CChhHhhcCCCCcEEEcccCCCCCCCCccCc
Q 040267 56 NRILSLELEEMNLSGQV-----PESLQSCKSLQVLNLSTNNLFGK----IPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.+++.|+|++|.+++.- +..+..+++|+.|+|++|.+++. +|..+.. +++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA-KESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH-CTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhh-CCCcceEECCCCCCchHHHHHHH
Confidence 56999999999998643 23334689999999999999964 6777766 99999999999999765444433
Q ss_pred -----CCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCCCCCccc
Q 040267 127 -----NCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 127 -----~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
..++|+.|+|++|.+++. +|..+..+++|+.|++++|.+++..+..+
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l 361 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHH
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHH
Confidence 337999999999999976 57778888999999999999987644433
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.81 E-value=4.6e-09 Score=103.63 Aligned_cols=154 Identities=19% Similarity=0.172 Sum_probs=111.8
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCC----------------cccEEEeecC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNL----------------EKPLVYKYMS 347 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni----------------~~~lv~e~~~ 347 (538)
.+.++.|....||+.. ..+++|..... .....+.+|.++++.+. +..+ ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4568999999999863 46888886532 23467889999998873 3333 3478999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC------------------------------------------ 385 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------------ 385 (538)
|.++.+.... .++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 100 GVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9888654332 367778888888888888888851
Q ss_pred -------------CCCCccccCCCCCCeeeCC--CCCeEEEeccCCcccCCC------------------------CCCc
Q 040267 386 -------------CHPPCLHQNISSSVILVDE--DFDARIMDFGFSRLTNGD------------------------ASLQ 426 (538)
Q Consensus 386 -------------~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~------------------------~~~~ 426 (538)
....++|+|++|.||++++ ...+.|.||+.+...... |...
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1135799999999999998 456789999987643211 1111
Q ss_pred ------------cCcccHHHHHHHHHhCCCCCC
Q 040267 427 ------------KDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 427 ------------~DV~S~Gvvl~elltg~~p~~ 447 (538)
.+.|++|.++|++.+|..+|.
T Consensus 256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 378889999999998887664
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-08 Score=103.46 Aligned_cols=130 Identities=12% Similarity=0.153 Sum_probs=95.9
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcc--ccc--ccHHHHHHHHHHHhcCCCCCC----------------cccEEEe
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLS--ACK--LGEKQFLLEMKQVGLLKHPNL----------------EKPLVYK 344 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~--~~~--~~~~~~~~E~~~l~~l~H~ni----------------~~~lv~e 344 (538)
.+.++.|.++.||+.... +..+++|+.. ... .....+.+|+++++.+.+.++ ..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456889999999999875 4678888876 332 223568889999998874333 2579999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-------------------------------------- 386 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------- 386 (538)
|+++..+.+... ..++..++..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999877754211 24778889999999999999999720
Q ss_pred -----------------CCCccccCCCCCCeeeCCCCC--eEEEeccCCccc
Q 040267 387 -----------------HPPCLHQNISSSVILVDEDFD--ARIMDFGFSRLT 419 (538)
Q Consensus 387 -----------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~ 419 (538)
...++|+|++|.||+++.++. +.|.||+.+..-
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 256999999999999997753 689999988653
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.68 E-value=5e-09 Score=100.55 Aligned_cols=80 Identities=29% Similarity=0.391 Sum_probs=66.6
Q ss_pred cCCCCCCeEEccCCcCCC--cCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCC--CCcEeeecCccccCCCCc-----
Q 040267 77 QSCKSLQVLNLSTNNLFG--KIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCV--YLNTLYLSYNRLSGPLPP----- 147 (538)
Q Consensus 77 ~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~ls~N~l~g~~p~----- 147 (538)
.++++|+.|+|++|+|++ .+|..+.. +++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~-l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~ 243 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYI 243 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHH-STTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhh-CCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHH
Confidence 468999999999999997 66777666 99999999999999965 3344444 999999999999988873
Q ss_pred --cccCCccccEEe
Q 040267 148 --QLSSLVRLKQFS 159 (538)
Q Consensus 148 --~l~~l~~L~~l~ 159 (538)
.+..+++|+.||
T Consensus 244 ~~il~~~P~L~~LD 257 (267)
T 3rw6_A 244 SAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHCTTCCEES
T ss_pred HHHHHHCcccCeEC
Confidence 367788888876
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.6e-09 Score=107.45 Aligned_cols=112 Identities=23% Similarity=0.204 Sum_probs=79.9
Q ss_pred CCEEEEEcCCCCccccCccccc-CCCCCCeEEccCCcCCCcCChhHhh----cCCCCcEEEcccCCCCC----CCCccCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTNNLFGKIPTQLCK----WFPYLVSLDLSNNDLSG----TIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~----~l~~L~~L~Ls~N~l~g----~~p~~~~ 126 (538)
..++.|+|++|+++..-...+. .+++|+.|+|++|.|+..-...++. ..++|++|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4689999999998754333333 3567888999999887543333332 24678899999988864 2444456
Q ss_pred CCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCC
Q 040267 127 NCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
.+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 788888999999888742 35556677788889999888875
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.2e-09 Score=111.01 Aligned_cols=112 Identities=21% Similarity=0.169 Sum_probs=87.2
Q ss_pred CCEEEEEcCCCCccccCcccccC-----CCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccC-----
Q 040267 56 NRILSLELEEMNLSGQVPESLQS-----CKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL----- 125 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~----- 125 (538)
..++.|+|++|+++..-...+.. .++|+.|+|++|.++..-...+...+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46899999999998654443332 37999999999999855445555557889999999999975444333
Q ss_pred cCCCCCcEeeecCccccC----CCCccccCCccccEEecccccCCC
Q 040267 126 GNCVYLNTLYLSYNRLSG----PLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 126 ~~l~~L~~L~ls~N~l~g----~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 356889999999999974 245566788999999999999875
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.4e-07 Score=94.04 Aligned_cols=77 Identities=22% Similarity=0.240 Sum_probs=52.1
Q ss_pred CCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcccc-EEecccccCCCCCCcccccccccccc
Q 040267 104 FPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLK-QFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 104 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~-~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++..-+..|.+|++|+ .+++.+ .++..-+..|.++.+|..+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 567778888877777444446777888888888777 6644456677777787 777777 5654445666666655544
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-08 Score=109.14 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=90.2
Q ss_pred CCEEEEEcCCCCccccCcccccC-CCCCCeEEcc----CCcCCCc-----CChhHhhcCCCCcEEEcccC--CCCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQS-CKSLQVLNLS----TNNLFGK-----IPTQLCKWFPYLVSLDLSNN--DLSGTIPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~g~-----ip~~~~~~l~~L~~L~Ls~N--~l~g~~p~ 123 (538)
.+++.|+|+.|++++..+..++. +++|+.|+|+ .|.+++. ++..+.. +++|+.|+|++| .+++..+.
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~-~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIG-CKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHH-CTTCCEEEEECCGGGCCHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHh-CCCCCEEEEecCCCCccHHHHH
Confidence 46889999889998887777776 8899999996 7788853 4444444 889999999753 36665555
Q ss_pred cCc-CCCCCcEeeecCccccC-CCCccccCCccccEEecccccCCCC-CCccccccccccc
Q 040267 124 ELG-NCVYLNTLYLSYNRLSG-PLPPQLSSLVRLKQFSVAYNCLSGR-IPSFFNGAMKMDM 181 (538)
Q Consensus 124 ~~~-~l~~L~~L~ls~N~l~g-~~p~~l~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~~ 181 (538)
.++ .+++|++|+|++|++++ .++..+.++++|+.|++++|.+++. ++..+..+++|+.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 517 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRY 517 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCE
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCe
Confidence 554 37889999999998876 3556667888899999999988654 3333334444443
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.44 E-value=3.7e-08 Score=89.64 Aligned_cols=110 Identities=16% Similarity=0.204 Sum_probs=81.3
Q ss_pred CCEEEEEcCCC-Ccccc----CcccccCCCCCCeEEccCCcCCCc----CChhHhhcCCCCcEEEcccCCCCCC----CC
Q 040267 56 NRILSLELEEM-NLSGQ----VPESLQSCKSLQVLNLSTNNLFGK----IPTQLCKWFPYLVSLDLSNNDLSGT----IP 122 (538)
Q Consensus 56 ~~l~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p 122 (538)
..++.|+|++| ++... +...+...++|++|+|++|.+... +...+.. .+.|++|+|++|.++.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~-n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKV-NNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHH-CSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHh-CCCcCEEECcCCcCCHHHHHHHH
Confidence 46899999998 88642 455677788999999999998742 2333333 57899999999998743 45
Q ss_pred ccCcCCCCCcEeee--cCccccCC----CCccccCCccccEEecccccCC
Q 040267 123 HELGNCVYLNTLYL--SYNRLSGP----LPPQLSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 123 ~~~~~l~~L~~L~l--s~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~ 166 (538)
..+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777788999999 78888743 3344555678999999888775
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.9e-07 Score=91.72 Aligned_cols=124 Identities=18% Similarity=0.142 Sum_probs=87.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCc-Ee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLN-TL 134 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L 134 (538)
..+..+.+.++-...........+++|+.|+|++|+++ .||...+..+.+|+.|+|++| +...-+..|.+|++|+ .+
T Consensus 202 ~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 202 RDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 34566666544222111111123788888888888888 788777777888888888887 6644455788888888 88
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
++.+ +++..-+..|.+|++|+.+++++|.++..-+..|.++++|+.+
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 8887 6664456788888888888888888886666677777766543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.33 E-value=2.2e-07 Score=100.21 Aligned_cols=105 Identities=12% Similarity=0.187 Sum_probs=74.7
Q ss_pred CEEEEEcCCCC-ccc-cCcccccCCCCCCeEEccCCcCCCc----CChhHhhcCCCCcEEEcccCCCC----CCCCccCc
Q 040267 57 RILSLELEEMN-LSG-QVPESLQSCKSLQVLNLSTNNLFGK----IPTQLCKWFPYLVSLDLSNNDLS----GTIPHELG 126 (538)
Q Consensus 57 ~l~~L~L~~n~-l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~ 126 (538)
+++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+.. +++|++|+|++|.++ +.++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~-~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH-NTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH-CCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc-CCCccEEEeeccCCCccCHHHHHHHHh
Confidence 48888888876 221 2233344788888888888888755 3333344 888888888888887 34444566
Q ss_pred CCCCCcEeeecCccccCCCCccccCCccccEEecccc
Q 040267 127 NCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N 163 (538)
++++|+.|+|++|.+++ +|..+.++++|+.|+++.+
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 78888888888888885 6777777788888887753
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.16 E-value=1.5e-07 Score=101.47 Aligned_cols=122 Identities=20% Similarity=0.247 Sum_probs=74.2
Q ss_pred CEEEEEcCCCCccccCccccc-CCCCCCeEEccCC-cCCCc-CChhHhhcCCCCcEEEcccCCCCCCCCccC----cCCC
Q 040267 57 RILSLELEEMNLSGQVPESLQ-SCKSLQVLNLSTN-NLFGK-IPTQLCKWFPYLVSLDLSNNDLSGTIPHEL----GNCV 129 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l~ 129 (538)
+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.. +++|++|+|++|.+++..+..+ ..++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~-~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAAT-CRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHH-CTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHh-CCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 577777777777766666665 5777888887777 44432 3333323 7778888887777665444333 3566
Q ss_pred CCcEeeecCccccCCCC-----ccccCCccccEEecccc-cCCCCCCcccccccccccc
Q 040267 130 YLNTLYLSYNRLSGPLP-----PQLSSLVRLKQFSVAYN-CLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 130 ~L~~L~ls~N~l~g~~p-----~~l~~l~~L~~l~l~~N-~l~g~~p~~~~~~~~l~~~ 182 (538)
+|+.|+|++|. +.++ ..+.++++|+.|++++| .+++ +|..+..+++|..+
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L 240 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEEL 240 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEE
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEc
Confidence 77788877776 2222 11234577777777777 3333 55555555555444
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=8.1e-06 Score=80.28 Aligned_cols=125 Identities=16% Similarity=0.156 Sum_probs=86.6
Q ss_pred CeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCC-CC--------------cccEEEeecCCCC
Q 040267 286 NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHP-NL--------------EKPLVYKYMSNGT 350 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~-ni--------------~~~lv~e~~~~gs 350 (538)
+.++.|....||+. |..+++|.-.. ......+.+|.++|..+.+. .+ ..++||||++|.+
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 46788888899987 56788887432 22346788999999998652 22 2579999999988
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------------
Q 040267 351 LYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC--------------------------------------------- 385 (538)
Q Consensus 351 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~--------------------------------------------- 385 (538)
+.+.... .++..++..++.++++.|+.||+.
T Consensus 100 l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 100 LGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp CHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred Cchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 7763211 234445555555555555555541
Q ss_pred ------------CCCCccccCCCCCCeeeCC---CCCe-EEEeccCCccc
Q 040267 386 ------------CHPPCLHQNISSSVILVDE---DFDA-RIMDFGFSRLT 419 (538)
Q Consensus 386 ------------~~~~ivH~Dlkp~NIll~~---~~~~-kl~Dfg~a~~~ 419 (538)
....++|+|++|.||+++. ++.+ .|.||+.+..-
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999997 4554 89999988764
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.10 E-value=3e-07 Score=99.08 Aligned_cols=125 Identities=12% Similarity=0.055 Sum_probs=91.5
Q ss_pred CCEEEEEcCCCCccccCccccc-CCCCCCeEEcc--C----CcCCCc-----CChhHhhcCCCCcEEEcccCCCCCCCCc
Q 040267 56 NRILSLELEEMNLSGQVPESLQ-SCKSLQVLNLS--T----NNLFGK-----IPTQLCKWFPYLVSLDLSNNDLSGTIPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g~-----ip~~~~~~l~~L~~L~Ls~N~l~g~~p~ 123 (538)
.+++.|++..|++++.....+. .+++|+.|+|+ + |.+++. ++..+.. +++|+.|+|++ .+++..+.
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~-~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEH-CKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHH-CTTCCEEECCS-SCCHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhh-CCCccEEeecC-cccHHHHH
Confidence 4688999999999987777776 58999999999 4 666621 2222334 89999999977 67766666
Q ss_pred cCcC-CCCCcEeeecCccccCCCCccc-cCCccccEEecccccCCCCCCc-ccccccccccc
Q 040267 124 ELGN-CVYLNTLYLSYNRLSGPLPPQL-SSLVRLKQFSVAYNCLSGRIPS-FFNGAMKMDML 182 (538)
Q Consensus 124 ~~~~-l~~L~~L~ls~N~l~g~~p~~l-~~l~~L~~l~l~~N~l~g~~p~-~~~~~~~l~~~ 182 (538)
.++. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++..+. ....+++|+.+
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 511 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSL 511 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEE
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEE
Confidence 6665 8999999999999986555555 6689999999999999654332 23334555444
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.89 E-value=9.2e-07 Score=89.08 Aligned_cols=109 Identities=15% Similarity=0.128 Sum_probs=76.9
Q ss_pred CCEEEEEcCCCC-ccccCcccccCCCCCCeEEccCCcCCCcCChhHhh-cCCCCcEEEccc--CCCCCC-----CCccC-
Q 040267 56 NRILSLELEEMN-LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK-WFPYLVSLDLSN--NDLSGT-----IPHEL- 125 (538)
Q Consensus 56 ~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~l~~L~~L~Ls~--N~l~g~-----~p~~~- 125 (538)
++++.|+|++|. + .+++ +. +++|+.|+|..|.++......+.. .+|+|+.|+|+. |...|. +...+
T Consensus 172 P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 579999998873 3 2444 43 899999999998887544444442 389999999963 222221 11122
Q ss_pred -cCCCCCcEeeecCccccCCCCcccc---CCccccEEecccccCCCC
Q 040267 126 -GNCVYLNTLYLSYNRLSGPLPPQLS---SLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 126 -~~l~~L~~L~ls~N~l~g~~p~~l~---~l~~L~~l~l~~N~l~g~ 168 (538)
..+++|++|+|++|.+++..+..+. .+++|+.|+|+.|.+++.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 3579999999999999854443343 578999999999999864
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=2.9e-06 Score=76.94 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=75.3
Q ss_pred ccCcccccCCCCCCeEEccCC-cCCCc----CChhHhhcCCCCcEEEcccCCCCCC----CCccCcCCCCCcEeeecCcc
Q 040267 70 GQVPESLQSCKSLQVLNLSTN-NLFGK----IPTQLCKWFPYLVSLDLSNNDLSGT----IPHELGNCVYLNTLYLSYNR 140 (538)
Q Consensus 70 g~~p~~~~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~ 140 (538)
..+...+...++|++|+|++| .+... +...+.. .++|++|+|++|.+... +...+...++|++|+|++|.
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~-~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKT-NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTT-CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHh-CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 345566788999999999999 88743 2233333 68899999999999742 33445567899999999999
Q ss_pred ccCC----CCccccCCccccEEec--ccccCCCC
Q 040267 141 LSGP----LPPQLSSLVRLKQFSV--AYNCLSGR 168 (538)
Q Consensus 141 l~g~----~p~~l~~l~~L~~l~l--~~N~l~g~ 168 (538)
|+.. +...+...++|+.|+| ++|.++..
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 9853 4566777889999999 88998753
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=7.1e-05 Score=71.82 Aligned_cols=125 Identities=19% Similarity=0.128 Sum_probs=84.9
Q ss_pred eEeecCCc-eEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCC----CCC--------cccEEEeecCCCCHH
Q 040267 287 VLVSTWTG-TTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH----PNL--------EKPLVYKYMSNGTLY 352 (538)
Q Consensus 287 ~ig~G~~g-~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H----~ni--------~~~lv~e~~~~gsL~ 352 (538)
.+..|..+ .||+.... ++..+++|+-... ....+.+|...|+.+.. |.+ ..++|||++++.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 35556555 58988754 4678899986532 24567889999887742 222 347999999998887
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 040267 353 SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHC----------------------------------------------- 385 (538)
Q Consensus 353 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~----------------------------------------------- 385 (538)
+..... ......++.+++..|+-||+.
T Consensus 109 ~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 109 QVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred ccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 765432 123334556666666666631
Q ss_pred --------CCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 386 --------CHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 386 --------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
....++|+|+.+.||++++++.+-|.||+.+..-
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 0113789999999999998777779999987654
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.71 E-value=6.2e-05 Score=76.86 Aligned_cols=117 Identities=13% Similarity=0.137 Sum_probs=76.2
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.+.|.+ +++..-+..|.+|++|+.++|++|+++ .||...+. ..+|+.+.|.+| +...-...|.+|++|+.++|
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 477777775 666555677888889999999888888 78877777 678888888744 65444556778888888888
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
..| ++..-...|.+ .+|+.+.+ .|.++..-+..|.++.+|.
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELA 274 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCC
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCC
Confidence 764 43222334444 55666666 3334433344455444443
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.70 E-value=6.6e-05 Score=76.68 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=62.9
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCC-----CCCCccCcCCCCC
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLS-----GTIPHELGNCVYL 131 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L 131 (538)
+++.|+|+++ ++..-...|.+ .+|+.+.| .|+++ .|+...+..+++|+.+++.+|.+. ..-+..|.+|++|
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 4666777653 44333344555 56677766 34454 555555555667777777666553 1223456666677
Q ss_pred cEeeecCccccCCCCccccCCccccEEecccccCCCCCCcccccc
Q 040267 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176 (538)
Q Consensus 132 ~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~ 176 (538)
+.++|. |.++-.-...|.+|.+|+.+++..| ++..-+..|.++
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 777666 3355333455666666777766444 443333444443
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.65 E-value=1.3e-05 Score=80.70 Aligned_cols=111 Identities=15% Similarity=0.176 Sum_probs=75.8
Q ss_pred CCEEEEEcCCCCc---------cccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCc
Q 040267 56 NRILSLELEEMNL---------SGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELG 126 (538)
Q Consensus 56 ~~l~~L~L~~n~l---------~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 126 (538)
.+|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .+|. + . +++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~-~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-P-RPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-B-CTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-c-CCCCcEEEEecCCCChHHHHHHH
Confidence 4688888876543 1235566778899999999988412 3554 2 4 78999999998887644333443
Q ss_pred --CCCCCcEeeecC--ccccCC-----CCccc--cCCccccEEecccccCCCCCC
Q 040267 127 --NCVYLNTLYLSY--NRLSGP-----LPPQL--SSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 127 --~l~~L~~L~ls~--N~l~g~-----~p~~l--~~l~~L~~l~l~~N~l~g~~p 170 (538)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|.+|.++...+
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~ 269 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVV 269 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHH
Confidence 789999999964 332222 11122 247899999999998875433
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=2.9e-05 Score=77.88 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=26.9
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
..++|+|+.|.||+++++..+.|.||+.+..-
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g 253 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVALG 253 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCEEE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccccC
Confidence 57899999999999996545789999987653
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00016 Score=71.78 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=35.0
Q ss_pred CCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHH
Q 040267 387 HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLEL 439 (538)
Q Consensus 387 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~el 439 (538)
...++|+|+++.||+++.++.+.|.||+.+..-. -+|-++.++..+
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~-------~~~Dla~~l~~~ 266 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDL-------PIRDLRKMIIPL 266 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEECC-------THHHHHHHHHHH
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcccCC-------hHHHHHHHHHHH
Confidence 4789999999999999888899999999865432 234455555555
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00017 Score=73.38 Aligned_cols=64 Identities=13% Similarity=0.013 Sum_probs=42.9
Q ss_pred CeEeecCCceEEEEEeC-CCCEEEEEEccccc--------ccHHHHHHHHHHHhcCCC------CCC------cccEEEe
Q 040267 286 NVLVSTWTGTTYKAMLL-DGSMLAIKRLSACK--------LGEKQFLLEMKQVGLLKH------PNL------EKPLVYK 344 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~H------~ni------~~~lv~e 344 (538)
+.+|.|..+.||++... +++.++||...... ....++..|.+++..+.. |.+ ..++|||
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvmE 115 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVME 115 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEEC
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEEE
Confidence 56899999999999854 46889999864311 123456778888877632 222 3469999
Q ss_pred ecCCC
Q 040267 345 YMSNG 349 (538)
Q Consensus 345 ~~~~g 349 (538)
|+++.
T Consensus 116 ~l~g~ 120 (397)
T 2olc_A 116 DLSHL 120 (397)
T ss_dssp CCTTS
T ss_pred eCCCc
Confidence 99763
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.37 E-value=8.2e-05 Score=66.16 Aligned_cols=84 Identities=10% Similarity=0.112 Sum_probs=53.4
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCc-CCCcCChhHhhc---CCCCcEEEcccCC-CCCCCCccCcCCCC
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN-LFGKIPTQLCKW---FPYLVSLDLSNND-LSGTIPHELGNCVY 130 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~~---l~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 130 (538)
-+++.|||+++.++..--..+..+++|+.|+|+++. ++..--..+... .++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 358888988888775544567788888888888885 553222233330 1357888888764 65332334556666
Q ss_pred CcEeeecCc
Q 040267 131 LNTLYLSYN 139 (538)
Q Consensus 131 L~~L~ls~N 139 (538)
|+.|+|++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 677766654
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0022 Score=61.98 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=50.0
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCC-CCC---------cccEEEeecCCCC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKH-PNL---------EKPLVYKYMSNGT 350 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H-~ni---------~~~lv~e~~~~gs 350 (538)
.+.+|.|..+.||+....+|+.|.+|+-.... .....|..|.+.|+.+.- ..+ ..++||||++.+.
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccCceEEEEeecccC
Confidence 45689999999999999999999999876433 223457889998888742 222 4468999998764
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.11 E-value=9.4e-05 Score=65.78 Aligned_cols=92 Identities=9% Similarity=0.048 Sum_probs=64.5
Q ss_pred CcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCC-CCCCCCccCcCC----CCCcEeeecCcc-ccCCC
Q 040267 72 VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNND-LSGTIPHELGNC----VYLNTLYLSYNR-LSGPL 145 (538)
Q Consensus 72 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~ls~N~-l~g~~ 145 (538)
+|.....--.|+.|||+++.++..=-..+.. +++|+.|+|+++. ++..--..++.+ ++|++|+|+++. +|..=
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~-~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEG-LQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTT-CSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcC-CCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 3443323347999999999987543344554 9999999999985 664433445554 479999999974 76422
Q ss_pred CccccCCccccEEeccccc
Q 040267 146 PPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 146 p~~l~~l~~L~~l~l~~N~ 164 (538)
=..+.++++|+.|+++++.
T Consensus 132 l~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHGGGCTTCCEEEEESCT
T ss_pred HHHHhcCCCCCEEECCCCC
Confidence 2346788999999999875
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0008 Score=56.81 Aligned_cols=55 Identities=24% Similarity=0.311 Sum_probs=26.2
Q ss_pred EEEcCCCCcc-ccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCC
Q 040267 60 SLELEEMNLS-GQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDL 117 (538)
Q Consensus 60 ~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l 117 (538)
.++.++++|+ ..+|..+ -++|+.|+|++|+|+ .+|...+..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 3444555554 2334321 124555555555555 44444444455555555555544
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0012 Score=64.32 Aligned_cols=130 Identities=15% Similarity=0.084 Sum_probs=70.2
Q ss_pred CCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC----CCC------cccEEEeec-CCCCHH
Q 040267 284 AQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH----PNL------EKPLVYKYM-SNGTLY 352 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H----~ni------~~~lv~e~~-~~gsL~ 352 (538)
..+.|+.|....+|+. ..+++|+............+|+.+++.+.. |.+ ..++++||+ ++.++.
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECTTTCCEEEECCTTCEECC
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEECCCCEEEEeecCCCccCC
Confidence 3577889999999998 568888876432111123457777666532 333 256899999 553332
Q ss_pred H------------------HhhcCCC---CCCCH-HHHHHHHHH--------------HHHHHH----HHhc-CCCCCcc
Q 040267 353 S------------------LLHSNGN---TALDW-PSRLRIGLG--------------AARGLS----WLHH-CCHPPCL 391 (538)
Q Consensus 353 ~------------------~l~~~~~---~~l~~-~~~~~i~~~--------------ia~~L~----yLH~-~~~~~iv 391 (538)
. .+|.... ...+. ....++... +...+. .+.. .....++
T Consensus 97 ~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~ 176 (301)
T 3dxq_A 97 PEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAAC 176 (301)
T ss_dssp HHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEE
T ss_pred HhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceee
Confidence 1 0111110 00111 111111100 111111 1111 1234589
Q ss_pred ccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 392 HQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 392 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
|+|+.|.||+ .+++.+.++||..+..-
T Consensus 177 HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 177 HCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred ccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 9999999999 55678899999887654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0054 Score=60.28 Aligned_cols=130 Identities=13% Similarity=0.071 Sum_probs=76.8
Q ss_pred eEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC-----CCCc-------------ccEEEeecCC
Q 040267 287 VLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH-----PNLE-------------KPLVYKYMSN 348 (538)
Q Consensus 287 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H-----~ni~-------------~~lv~e~~~~ 348 (538)
.++ |....||+....+|+.+++|...........+..|..++..+.. |.+. .+++|||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 466 77889999887778789999987543445677778887776642 2221 1468999987
Q ss_pred CCHH-----HH---------hhc----CC---CCCCCHHHH----HHH---------------HHHHHHHHHHHhc----
Q 040267 349 GTLY-----SL---------LHS----NG---NTALDWPSR----LRI---------------GLGAARGLSWLHH---- 384 (538)
Q Consensus 349 gsL~-----~~---------l~~----~~---~~~l~~~~~----~~i---------------~~~ia~~L~yLH~---- 384 (538)
..+. .+ +|. .. ...+++... ..+ ...+...++.+.+
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4321 11 111 00 011222211 001 1111112223221
Q ss_pred CCCCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 385 CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 385 ~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
.....++|+|+++.||+++ + .+.|.||+.+..-
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 1235689999999999999 4 8999999887654
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0017 Score=63.73 Aligned_cols=161 Identities=9% Similarity=0.066 Sum_probs=88.8
Q ss_pred cCHHHHHHHhcCCCCC-----CeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC-----CCCc-
Q 040267 270 LKLVHLIAATSNFSAQ-----NVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH-----PNLE- 338 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~-----~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H-----~ni~- 338 (538)
++.+++......|... +.|+.|....+|+....+| .+++|..... ...+++..|+.++..+.. |.+.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 4555666655556542 3355677788999987666 6888988652 122345667777666532 2221
Q ss_pred -------------ccEEEeecCCCCHHH--------------HhhcC----CCC---C---CCHHHHHH-----------
Q 040267 339 -------------KPLVYKYMSNGTLYS--------------LLHSN----GNT---A---LDWPSRLR----------- 370 (538)
Q Consensus 339 -------------~~lv~e~~~~gsL~~--------------~l~~~----~~~---~---l~~~~~~~----------- 370 (538)
.+++++|++|..+.. .+|.. ... . ..|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 258999998754311 01211 000 0 12332111
Q ss_pred -HHHHHHHHHHHHhc----CCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHH
Q 040267 371 -IGLGAARGLSWLHH----CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLEL 439 (538)
Q Consensus 371 -i~~~ia~~L~yLH~----~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~el 439 (538)
+...+...++++++ .....++|+|+.+.||+++++..+.|.||+.+..- .=+|-+++++..+
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g-------~~~~Dla~~l~~~ 231 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACND-------LLAYDVSICLNAW 231 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEE-------EHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccCc-------hhHHHHHHHHHHH
Confidence 01123445555553 12356999999999999988766689999886542 1234455555544
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0017 Score=54.70 Aligned_cols=36 Identities=25% Similarity=0.230 Sum_probs=17.5
Q ss_pred CcEeeecCccccCCCCccccCCccccEEecccccCC
Q 040267 131 LNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLS 166 (538)
Q Consensus 131 L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~ 166 (538)
|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 444444444444322334445555555555555543
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0053 Score=62.84 Aligned_cols=31 Identities=19% Similarity=0.406 Sum_probs=27.7
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
..++|+|++|.||+++.++ +++.||+.+..-
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 7899999999999998876 999999987754
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0034 Score=61.46 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=79.3
Q ss_pred CCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCC------CCC--------cccEEEeecCCCC
Q 040267 285 QNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH------PNL--------EKPLVYKYMSNGT 350 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H------~ni--------~~~lv~e~~~~gs 350 (538)
.+.|+.|....+|+... ++..+++|..... ....+..|.+.|+.+.. |.+ ..++||||+++..
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 35688999999999886 5678889987543 35668889888887742 222 2479999999875
Q ss_pred HH--------H---HhhcCCC-C-------------------CCCHHHHH---HHHH----------------HHHHH-H
Q 040267 351 LY--------S---LLHSNGN-T-------------------ALDWPSRL---RIGL----------------GAARG-L 379 (538)
Q Consensus 351 L~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~~----------------~ia~~-L 379 (538)
+. + .+|.... . .-+|.... ++.. .+... .
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 42 1 1222211 0 12455322 1111 11111 2
Q ss_pred HHHhc-CCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 380 SWLHH-CCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 380 ~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
..|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23421 2346799999999999999887 8899973
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0031 Score=64.82 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=43.8
Q ss_pred CeEeecCCceEEEEEeCC--------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~g 349 (538)
+.|+.|....+|+....+ +..+++|+.... .....+.+|..++..+...++ ...+|+||+++.
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~g~v~e~l~G~ 157 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSR 157 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCEEEEEeCCc
Confidence 457788889999998753 578999988432 222566689998888754344 123799999863
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0039 Score=64.50 Aligned_cols=65 Identities=12% Similarity=0.023 Sum_probs=42.0
Q ss_pred CeEeecCCceEEEEEeCC-CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNGT 350 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~gs 350 (538)
+.|+.|....+|+....+ +..+++|+............+|..++..+...++ ...+||||+++.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTNGRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETTEEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCCeEEEEeeCCcc
Confidence 457788889999998765 4788899875422111122578888888865555 2237999998743
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0035 Score=63.10 Aligned_cols=148 Identities=16% Similarity=0.166 Sum_probs=87.3
Q ss_pred CeEeecCCceEEEEEeCC--------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~g 349 (538)
+.+..|-...+|+....+ ++.+++|+..........+.+|.++++.+.-.++ ...+||||++|.
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g~v~e~i~G~ 135 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSR 135 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCSEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccEEEEecCc
Confidence 356677788899998642 4789999864432345567789999887753333 223899999875
Q ss_pred CHHH--------------H---hhcCC---CCCCC--HHHHHHHHHHHHH-------------------HHHHHh----c
Q 040267 350 TLYS--------------L---LHSNG---NTALD--WPSRLRIGLGAAR-------------------GLSWLH----H 384 (538)
Q Consensus 350 sL~~--------------~---l~~~~---~~~l~--~~~~~~i~~~ia~-------------------~L~yLH----~ 384 (538)
+|.. . +|... .+... |.+..++..++.. .+..|. .
T Consensus 136 ~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~ 215 (379)
T 3feg_A 136 PLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLES 215 (379)
T ss_dssp ECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHT
T ss_pred cCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhh
Confidence 4421 1 12111 11122 4555555544322 223332 2
Q ss_pred -CCCCCccccCCCCCCeeeCCC----CCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 385 -CCHPPCLHQNISSSVILVDED----FDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 385 -~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
.....++|+|+.+.||+++.+ +.+.+.||..+..- .=.|-+|..+.|..
T Consensus 216 ~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~-------~~~~Dla~~~~~~~ 269 (379)
T 3feg_A 216 TPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN-------YRGFDIGNHFCEWV 269 (379)
T ss_dssp SCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE-------EHHHHHHHHHHHTT
T ss_pred cCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC-------ChHHHHHHHHHHHH
Confidence 123468999999999999876 78999999886543 22455777777765
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0038 Score=61.59 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=28.8
Q ss_pred CCCccccCCCCCCeeeCCC----CCeEEEeccCCcccC
Q 040267 387 HPPCLHQNISSSVILVDED----FDARIMDFGFSRLTN 420 (538)
Q Consensus 387 ~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~ 420 (538)
...++|+|+.+.||+++.+ ..+.|.||+.+..-.
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 3679999999999999875 678999999887653
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0086 Score=60.63 Aligned_cols=83 Identities=14% Similarity=0.307 Sum_probs=36.6
Q ss_pred cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcc
Q 040267 75 SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVR 154 (538)
Q Consensus 75 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~ 154 (538)
.|.+++.|+.+.+..+.. .+....+..++.|+.+.+. +.++..-...|.+|.+|+.++|..| ++-.-..+|.+|.+
T Consensus 260 aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEecccccc--eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 445555555555543332 2333333334555555553 2233222234455555555555432 33122334555555
Q ss_pred ccEEecc
Q 040267 155 LKQFSVA 161 (538)
Q Consensus 155 L~~l~l~ 161 (538)
|+.+.+.
T Consensus 336 L~~i~ip 342 (394)
T 4gt6_A 336 LERIAIP 342 (394)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 5555554
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.00074 Score=61.14 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=17.9
Q ss_pred CEEEEEcCCC-Cccc----cCcccccCCCCCCeEEccCCcCC
Q 040267 57 RILSLELEEM-NLSG----QVPESLQSCKSLQVLNLSTNNLF 93 (538)
Q Consensus 57 ~l~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~ 93 (538)
.++.|+|++| ++.. .+...+..-+.|+.|+|++|.+.
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 4555555553 4432 12333444455555555555554
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0024 Score=64.17 Aligned_cols=45 Identities=16% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
..++|+|+.+.||+++++. +.|+||..+..-. =.|=+|.++.+..
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~g~-------~~~Dla~~~~~~~ 256 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGFNF-------LATDIANFFIETS 256 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCEEEE-------HHHHHHHHHHGGG
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCCCCc-------hHHHHHHHHHHHh
Confidence 4689999999999998654 8999998865431 2344666666654
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0066 Score=61.04 Aligned_cols=119 Identities=12% Similarity=0.138 Sum_probs=66.6
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.+..+.+..+ +...-...+.++..|+.+.+..+ ++ .|....+..+.+|+.+.+..+ +...-...|..|++|+.+.+
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 3455555433 33333445666777777777654 44 455555555667777777543 43222345667777777777
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
.+|.++..-+..|.++.+|+.+.+..+ ++..-..+|.++.+|.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 336 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALS 336 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCC
Confidence 766666333456677777777777544 3322233455444443
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.01 Score=60.04 Aligned_cols=101 Identities=17% Similarity=0.219 Sum_probs=75.2
Q ss_pred ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCc
Q 040267 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLV 153 (538)
Q Consensus 74 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~ 153 (538)
..+..+.+|+.+.+..+ ++ .|+...+..+.+|+.++|.++ ++-.-...|.+|++|+.+++..| ++..-..+|.+|.
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred ccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 45778999999999765 55 677776766899999999755 66334567999999999999877 6634456899999
Q ss_pred cccEEecccccCCCCCCcccccccccc
Q 040267 154 RLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 154 ~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+|+.+++..|- + .+...|.+.++|+
T Consensus 367 ~L~~i~lp~~~-~-~~~~~F~~c~~L~ 391 (394)
T 4fs7_A 367 NLKKVELPKRL-E-QYRYDFEDTTKFK 391 (394)
T ss_dssp TCCEEEEEGGG-G-GGGGGBCTTCEEE
T ss_pred CCCEEEECCCC-E-EhhheecCCCCCc
Confidence 99999997662 2 2234565555554
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0096 Score=60.25 Aligned_cols=104 Identities=13% Similarity=0.243 Sum_probs=80.2
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.+.+.++-.+ .-...|.++++|+.+.+. +.++ .|+...+..+.+|+.++|..| ++-.-...|.+|.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 4677777654432 445678899999999996 5566 788887877999999999865 55344567999999999999
Q ss_pred cCccccCCCCccccCCccccEEecccccC
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l 165 (538)
..+ ++-.-..+|.+|.+|+.+++.+|..
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 765 6633457899999999999998754
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.024 Score=56.80 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=42.7
Q ss_pred cccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCcc
Q 040267 75 SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVR 154 (538)
Q Consensus 75 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~ 154 (538)
.+..+.+|+.+.+..+ +. .++...+..+..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++.+
T Consensus 212 ~f~~~~~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTCSSCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred ccccccccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 3444455555555433 22 233333333455555555443 33222334445555555555432 22122234455555
Q ss_pred ccEEecccccCCCCCCccccccc
Q 040267 155 LKQFSVAYNCLSGRIPSFFNGAM 177 (538)
Q Consensus 155 L~~l~l~~N~l~g~~p~~~~~~~ 177 (538)
|+.+.+.++.++..-...|.++.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCT
T ss_pred cccccccccccceehhhhhcCCC
Confidence 55555555544433233444433
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.037 Score=54.73 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=28.8
Q ss_pred CCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 388 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
..++|+|+.+.||++++++.+.|.||+.+....
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 569999999999999988889999998876543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.042 Score=55.47 Aligned_cols=104 Identities=12% Similarity=0.181 Sum_probs=46.5
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCC-------------------CcCChhHhhcCCCCcEEEcccCCC
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLF-------------------GKIPTQLCKWFPYLVSLDLSNNDL 117 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~-------------------g~ip~~~~~~l~~L~~L~Ls~N~l 117 (538)
.++.+.+... ++..-...+..+..|+.+.+..+... ..++...+..+.+|+.+.+.++ +
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i 308 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-V 308 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-C
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccccccccccccc-c
Confidence 3555555432 22222334555666666666554332 0122222223455555555433 3
Q ss_pred CCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccc
Q 040267 118 SGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYN 163 (538)
Q Consensus 118 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N 163 (538)
...-...|.+|++|+.++|..+ ++-.-..+|.+|.+|+.+++..|
T Consensus 309 ~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 309 KFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 3222334555555555555432 33222344555555555555444
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.0073 Score=54.58 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=63.2
Q ss_pred CcccccCCCCCCeEEccCC-cCCCc----CChhHhhcCCCCcEEEcccCCCCCC----CCccCcCCCCCcEeeecCcccc
Q 040267 72 VPESLQSCKSLQVLNLSTN-NLFGK----IPTQLCKWFPYLVSLDLSNNDLSGT----IPHELGNCVYLNTLYLSYNRLS 142 (538)
Q Consensus 72 ~p~~~~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 142 (538)
+...+.+-+.|++|+|++| .+... +-..+.. -..|+.|+|++|++... +-..+..-++|+.|+|++|.|+
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~-N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACN-SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTT-CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhh-CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3344566789999999986 76522 2222333 46799999999999732 2223445688999999999998
Q ss_pred CC----CCccccCCccccEEeccccc
Q 040267 143 GP----LPPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 143 g~----~p~~l~~l~~L~~l~l~~N~ 164 (538)
.. +-..+..-+.|+.|+|++|.
T Consensus 112 ~~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 112 PELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHHHHhhCCceeEEECCCCc
Confidence 42 22345555679999998763
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.026 Score=57.64 Aligned_cols=147 Identities=10% Similarity=0.138 Sum_probs=87.2
Q ss_pred CeEeecCCceEEEEEeCC--------CCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~g 349 (538)
+.+..|-...+|+....+ +..+++|+............+|.++++.+.-.++ ..++|+||++|.
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~~~~I~efI~G~ 155 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFPEGRIEEFIDGE 155 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCCSE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcCCCEEEEEeCCc
Confidence 356677788899998753 5789999875432111224568887777743233 335899999985
Q ss_pred CHHH--------------Hh---hc----C-------CCCCCCHHHHHHHHHHH-------------------HHHHHHH
Q 040267 350 TLYS--------------LL---HS----N-------GNTALDWPSRLRIGLGA-------------------ARGLSWL 382 (538)
Q Consensus 350 sL~~--------------~l---~~----~-------~~~~l~~~~~~~i~~~i-------------------a~~L~yL 382 (538)
.|.. .+ |. . .....-|.+..++..++ ...+.+|
T Consensus 156 ~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e~~~L 235 (424)
T 3mes_A 156 PLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEEIDQL 235 (424)
T ss_dssp ECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHH
T ss_pred cCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHHHHHH
Confidence 4311 01 11 0 11111244444443322 2223333
Q ss_pred hc---------------------CCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 383 HH---------------------CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 383 H~---------------------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
.+ .....++|+|+.+.||+ +.++.+.+.||..+... .=.|-+|..+.|..
T Consensus 236 ~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~-------~~~~Dla~~~~~~~ 306 (424)
T 3mes_A 236 EELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAIN-------FAGADIANYFCEYI 306 (424)
T ss_dssp HHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEE-------EHHHHHHHHHHTTT
T ss_pred HHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcC-------ChHHHHHHHHHHHH
Confidence 21 11245899999999999 77889999999886543 22456777777765
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=94.06 E-value=0.26 Score=44.91 Aligned_cols=89 Identities=12% Similarity=0.119 Sum_probs=60.9
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc-----ccCC--
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR-----LTNG-- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~-----~~~~-- 421 (538)
-+|.+.|...+ .++++.+++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.+...+ ..+. ...+
T Consensus 33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~~~~~~~~~pe~ 108 (229)
T 2yle_A 33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADDAGEPPPVAGKL 108 (229)
T ss_dssp EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------CC
T ss_pred ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-ccccccccCCCChhh
Confidence 37999998765 3799999999999999998776210001 1222346899999999987764 2221 1111
Q ss_pred ---CCCCccCcccHHHHHHHHHh
Q 040267 422 ---DASLQKDVHGFGVVLLELVT 441 (538)
Q Consensus 422 ---~~~~~~DV~S~Gvvl~ellt 441 (538)
..+.+.=|||+|+++|.-+-
T Consensus 109 ~~~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 109 GYSQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp SSSSSCHHHHHHHHHHHHHHHHT
T ss_pred ccccchHHHHHHHHHHHHHHHhh
Confidence 13677889999999999886
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=92.32 E-value=0.12 Score=52.17 Aligned_cols=44 Identities=20% Similarity=0.305 Sum_probs=33.3
Q ss_pred ccccCCCCCCeee------CCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHHH
Q 040267 390 CLHQNISSSVILV------DEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELV 440 (538)
Q Consensus 390 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ell 440 (538)
++|+|+.+.||++ +++..++++||..|..-.. .|=+|..+.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~-------~fDlan~f~ew~ 295 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYR-------GFDIGNHFCEWM 295 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEH-------HHHHHHHHHHTT
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCc-------hHhHHHHHHHHh
Confidence 5799999999999 4567899999988765422 344677777765
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=92.00 E-value=0.18 Score=32.89 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=6.7
Q ss_pred hhhhhhhHHHHHHHHHHh
Q 040267 211 GAFGAAPSLMLVFGLWLW 228 (538)
Q Consensus 211 ~i~~~~~~l~l~~~~~~~ 228 (538)
.+.|++.++++++++.+|
T Consensus 17 ~vVGvll~vi~~l~~~~~ 34 (44)
T 2jwa_A 17 AVVGILLVVVLGVVFGIL 34 (44)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 333433333333333333
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.44 E-value=0.12 Score=33.92 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=9.1
Q ss_pred HHHhhhhhhhhhHHHHHHHH
Q 040267 206 AIIAAGAFGAAPSLMLVFGL 225 (538)
Q Consensus 206 ~ii~~~i~~~~~~l~l~~~~ 225 (538)
.+++.++++++.+++++++.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~ 31 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGI 31 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHH
T ss_pred eEEeehhHHHHHHHHHHHHH
Confidence 34444454444444444433
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.41 E-value=0.24 Score=32.33 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=12.5
Q ss_pred hhHHHHhhhhhhhhhHHHHHHHHHHh
Q 040267 203 KLAAIIAAGAFGAAPSLMLVFGLWLW 228 (538)
Q Consensus 203 ~~~~ii~~~i~~~~~~l~l~~~~~~~ 228 (538)
....+++.++.+++.+++++++.+++
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~ 33 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVY 33 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHH
Confidence 33445555555555554444443333
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=86.56 E-value=0.46 Score=43.14 Aligned_cols=99 Identities=9% Similarity=0.040 Sum_probs=71.7
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
++..|-...+...+-.-. .++...+++++..|+....+++. =+|--+.|+|+++|.++.+++.-.|+...+.
T Consensus 59 v~~~y~~~~~~~~f~~ik---~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 59 FQIHYDINDNHTPFDNIK---SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp EEEEECCCTTSEEGGGGG---GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTSCEEESCCEETTTBS
T ss_pred EEEEEEcCcccCCHHHHH---hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCCCEEEEEccCccCCC
Confidence 445554443333333222 37889999999999998876664 2678899999999999999999999876665
Q ss_pred CC-CCCccCcccHHHHHHHHHhCCCCCC
Q 040267 421 GD-ASLQKDVHGFGVVLLELVTGQKPFE 447 (538)
Q Consensus 421 ~~-~~~~~DV~S~Gvvl~elltg~~p~~ 447 (538)
+. .+...=.-.+=+++..+++++..|+
T Consensus 131 P~~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 131 PLPVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 44 2333334478888999999998886
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=83.58 E-value=0.72 Score=42.01 Aligned_cols=81 Identities=12% Similarity=0.179 Sum_probs=62.3
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCc-ccHHHHHHHH
Q 040267 362 ALDWPSRLRIGLGAARGLS-WLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDV-HGFGVVLLEL 439 (538)
Q Consensus 362 ~l~~~~~~~i~~~ia~~L~-yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV-~S~Gvvl~el 439 (538)
.++...+++++..++.... +++. -+|--+.|+||++|.++.+++.-.|+-..+.+.-....|. -.+=+++..+
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP~e~~ee~fl~qyKali~al 155 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKESLPPDEWDDERLLREVKATVLAL 155 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTTBSSCSCCHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 3788999999999988666 5554 3677889999999999999999999877665432223333 4677888888
Q ss_pred HhCCCCCC
Q 040267 440 VTGQKPFE 447 (538)
Q Consensus 440 ltg~~p~~ 447 (538)
+.++..|+
T Consensus 156 l~~K~~Fe 163 (219)
T 4ano_A 156 TEGEYRFD 163 (219)
T ss_dssp TTCSSCHH
T ss_pred HcCCCCHH
Confidence 88887775
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 538 | ||||
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-32 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-31 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-31 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-29 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-29 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 8e-29 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-28 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-27 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-26 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-25 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-25 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-25 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-24 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-24 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-24 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 3e-24 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 9e-24 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-23 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 8e-23 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-22 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-21 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-21 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-21 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-21 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-20 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-20 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-20 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 9e-20 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-19 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-19 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-19 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-19 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-19 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-19 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 5e-19 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 3e-18 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-18 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 8e-18 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-17 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 7e-17 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-16 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-16 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-16 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-16 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-16 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-16 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 9e-16 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-15 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-14 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-14 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-14 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-14 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-13 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-13 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-13 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-13 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-12 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-10 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-04 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-07 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-06 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 7e-10 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 8e-10 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-04 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-09 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-09 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-05 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 6e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-06 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-05 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-04 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 6e-04 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-04 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 5e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 8e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 0.003 |
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 4e-32
Identities = 45/288 (15%), Positives = 99/288 (34%), Gaps = 60/288 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL---------------E 338
G ++ G +A+K S+ + E+ Q +L+H N+ +
Sbjct: 17 GEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75
Query: 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-----HPPCLHQ 393
LV Y +G+L+ L+ + +++ L A GL+ LH P H+
Sbjct: 76 LWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132
Query: 394 NISSSVILVDEDFDARIMDFGFSRL---------------------------------TN 420
++ S ILV ++ I D G + +
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192
Query: 421 GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVN--WIDQLSSSGRIKDVIDK 478
++ + D++ G+V E+ I+ + +LV + + +
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252
Query: 479 ALTGKGYDDEILQFL-QIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525
+ + E L+ + +I +C + + ++ +L +++Q G
Sbjct: 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 1e-31
Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 54/254 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVY 343
G + + +A+K L + FL E + L+H L ++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
+YM NG+L L + L L + A G++++ + +H+++ ++ ILV
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVS 143
Query: 404 EDFDARIMDFGFSR------------------------LTNGDASLQKDVHGFGVVLLEL 439
+ +I DFG +R + G +++ DV FG++L E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 440 VTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKC 499
VT + + NL + +++ + C
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ-----------------LMRLC 246
Query: 500 VAVRPKEKWSMYQV 513
RP+++ + +
Sbjct: 247 WKERPEDRPTFDYL 260
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 1e-31
Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 60/272 (22%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQ---FLLEMKQVGLLKHPNL----------EKP 340
GT YK +A+K L+ +Q F E+ + +H N+ +
Sbjct: 22 GTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 79
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
+V ++ +LY LH T + + I A+G+ +LH +H+++ S+ I
Sbjct: 80 IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNI 135
Query: 401 LVDEDFDARIMDFGFSRLTNGDASLQK----------------------------DVHGF 432
+ ED +I DFG + + + + + DV+ F
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 433 GVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQF 492
G+VL EL+TGQ P+ N + I + G + + K +
Sbjct: 196 GIVLYELMTGQLPYS--------NINNRDQIIFMVGRGYLSPDLSKV-----RSNCPKAM 242
Query: 493 LQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524
++ +C+ + E+ Q+ S+ +A L
Sbjct: 243 KRLMAECLKKKRDERPLFPQILASIELLARSL 274
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (284), Expect = 4e-29
Identities = 50/264 (18%), Positives = 95/264 (35%), Gaps = 56/264 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342
G + L+ +AIK + + E+ F+ E + + L HP L LV
Sbjct: 19 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
+++M +G L L + + L + L G + + +H+++++ LV
Sbjct: 79 FEFMEHGCLSDYLRTQRGLF-AAETLLGMCLDVCEG---MAYLEEACVIHRDLAARNCLV 134
Query: 403 DEDFDARIMDFGFSR------------------------LTNGDASLQKDVHGFGVVLLE 438
E+ ++ DFG +R + S + DV FGV++ E
Sbjct: 135 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 194
Query: 439 LVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACK 498
+ + K N S ++ +S+ R+ QI
Sbjct: 195 VFSEGKIPYENRSNS-------EVVEDISTGFRLYKP----------RLASTHVYQIMNH 237
Query: 499 CVAVRPKEKWSMYQVYISLCSIAE 522
C RP+++ + ++ L IAE
Sbjct: 238 CWKERPEDRPAFSRLLRQLAEIAE 261
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 114 bits (286), Expect = 5e-29
Identities = 48/290 (16%), Positives = 108/290 (37%), Gaps = 56/290 (19%)
Query: 280 SNFSAQNVLVSTWTGTTYKAMLLDGSML-AIKRLSACKLGEKQFLLEMKQVGLLKHPNL- 337
++ + ++ L G Y+ + S+ A+K L + ++FL E + +KHPNL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 338 ----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCH 387
++ ++M+ G L L + L + + + +L
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK--- 133
Query: 388 PPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------------------------A 423
+H+++++ LV E+ ++ DFG SRL GD
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 424 SLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483
S++ DV FGV+L E+ T ++ ++++K +
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSP-----------------YPGIDLSQVYELLEKDYRME 236
Query: 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEEN 533
+ + ++ C P ++ S +++ + ++ ++ S+ E+
Sbjct: 237 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 286
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (284), Expect = 8e-29
Identities = 46/254 (18%), Positives = 91/254 (35%), Gaps = 54/254 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVY 343
G + + +AIK L + + FL E + + L+H L +V
Sbjct: 31 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT 90
Query: 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403
+YMS G+L L L P + + A G++++ + +H+++ ++ ILV
Sbjct: 91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANILVG 147
Query: 404 EDFDARIMDFGFSRL------------------------TNGDASLQKDVHGFGVVLLEL 439
E+ ++ DFG +RL G +++ DV FG++L EL
Sbjct: 148 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 207
Query: 440 VTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKC 499
T + + D +++ + + C+C
Sbjct: 208 TTKGRVPYPGMVNR-----------------EVLDQVERGYRMPCPPECPESLHDLMCQC 250
Query: 500 VAVRPKEKWSMYQV 513
P+E+ + +
Sbjct: 251 WRKEPEERPTFEYL 264
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 5e-28
Identities = 50/259 (19%), Positives = 92/259 (35%), Gaps = 54/259 (20%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK------------PL 341
G G+ +A+K + + FL E + L+H NL + +
Sbjct: 21 GDVMLGDY-RGNKVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401
V +YM+ G+L L S G + L L+ L + +L +H+++++ +L
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVL 135
Query: 402 VDEDFDARIMDFGFSR--------------------LTNGDASLQKDVHGFGVVLLELVT 441
V ED A++ DFG ++ L S + DV FG++L E+ +
Sbjct: 136 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 195
Query: 442 GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVA 501
+ Y + + G D D G + + ++ C
Sbjct: 196 FGRVP--------YPRIPLKDVVPRVEKGYKMDAPD------GCPPAVYEVMK---NCWH 238
Query: 502 VRPKEKWSMYQVYISLCSI 520
+ + S Q+ L I
Sbjct: 239 LDAAMRPSFLQLREQLEHI 257
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 3e-27
Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 62/264 (23%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKP--------- 340
G K DG +L K L + E + + E+ + LKHPN+ +
Sbjct: 18 GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 77
Query: 341 ----LVYKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLH--HCCHPPCLH 392
+V +Y G L S++ LD LR+ L H LH
Sbjct: 78 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLH 137
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DV 429
+++ + + +D + ++ DFG +R+ N D S K D+
Sbjct: 138 RDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDI 197
Query: 430 HGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEI 489
G +L EL PF + +E ++ Y DE+
Sbjct: 198 WSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR---------------YSDEL 242
Query: 490 LQFLQIACKCVAVRPKEKWSMYQV 513
+ + + + ++ + S+ ++
Sbjct: 243 NEIIT---RMLNLKDYHRPSVEEI 263
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 3e-26
Identities = 43/256 (16%), Positives = 84/256 (32%), Gaps = 58/256 (22%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLV 342
G +AIK + + E +F+ E K + L H L ++
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
+YM+NG L + L + L + + +L LH+++++ LV
Sbjct: 78 TEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLV 133
Query: 403 DEDFDARIMDFGFSR------------------------LTNGDASLQKDVHGFGVVLLE 438
++ ++ DFG SR L S + D+ FGV++ E
Sbjct: 134 NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193
Query: 439 LVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIAC 497
+ + G+ P+E ++ + I + L + I
Sbjct: 194 IYSLGKMPYE------------------RFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 235
Query: 498 KCVAVRPKEKWSMYQV 513
C + E+ + +
Sbjct: 236 SCWHEKADERPTFKIL 251
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 104 bits (259), Expect = 2e-25
Identities = 50/303 (16%), Positives = 99/303 (32%), Gaps = 77/303 (25%)
Query: 275 LIAATSNFSA---------QNVLVSTWTGTTYKAMLL----DGSMLAIKRL--SACKLGE 319
A F+ + V+ + G L +AIK L +
Sbjct: 12 PNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR 71
Query: 320 KQFLLEMKQVGLLKHPNLEKP-----------LVYKYMSNGTLYSLLHSNGNTALDWPSR 368
+ FL E +G HPN+ ++ ++M NG+L S L N
Sbjct: 72 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-TVIQL 130
Query: 369 LRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK- 427
+ + G A G+ + +H+++++ ILV+ + ++ DFG SR D S
Sbjct: 131 VGMLRGIAAGM---KYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 187
Query: 428 ---------------------------DVHGFGVVLLELVT-GQKPFEINASEEGYKGNL 459
DV +G+V+ E+++ G++P+ +++
Sbjct: 188 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD------ 241
Query: 460 VNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCS 519
+ + I++ D Q+ C + Q+ +L
Sbjct: 242 ------------VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 289
Query: 520 IAE 522
+
Sbjct: 290 MIR 292
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 2e-25
Identities = 62/298 (20%), Positives = 111/298 (37%), Gaps = 75/298 (25%)
Query: 280 SNFSAQNVLVSTWTGTTYKAMLLDGSML---AIKRLS--ACKLGEKQFLLEMKQVG-LLK 333
++ Q+V+ G KA + + AIKR+ A K + F E++ + L
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 334 HPNL-----------EKPLVYKYMSNGTLYSLLH--------------SNGNTALDWPSR 368
HPN+ L +Y +G L L ++ + L
Sbjct: 70 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129
Query: 369 LRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR----------- 417
L ARG+ + +H+++++ ILV E++ A+I DFG SR
Sbjct: 130 LHFAADVARGM---DYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 186
Query: 418 -----------LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG-NLVNWIDQ 465
L + DV +GV+L E+V+ Y G ++
Sbjct: 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--------YCGMTCAELYEK 238
Query: 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523
L R++ ++ DDE+ ++ +C +P E+ S Q+ +SL + E+
Sbjct: 239 LPQGYRLEKPLN-------CDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 3e-25
Identities = 52/289 (17%), Positives = 97/289 (33%), Gaps = 66/289 (22%)
Query: 294 GTTYKAMLLDGS----MLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL---------- 337
G Y LLD A+K L+ QFL E + HPN+
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 338 --EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
+V YM +G L + + + + + GL A+G+ +H+++
Sbjct: 101 EGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQVAKGM---KFLASKKFVHRDL 156
Query: 396 SSSVILVDEDFDARIMDFGFSR---------------------------LTNGDASLQKD 428
++ ++DE F ++ DFG +R L + + D
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 216
Query: 429 VHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488
V FGV+L EL+T P N + L R+ + D
Sbjct: 217 VWSFGVLLWELMTRGAPPY-------PDVNTFDITVYLLQGRRLLQ-------PEYCPDP 262
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFYEENSPFI 537
+ + + KC + + + S ++ + +I + N+ ++
Sbjct: 263 LYEVML---KCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYV 308
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 2e-24
Identities = 46/283 (16%), Positives = 92/283 (32%), Gaps = 70/283 (24%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE--KQFLLEMKQVGLLKHPNL-----------EK 339
G +K G ++A K + Q + E++ + P + E
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 79
Query: 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
+ ++M G+L +L G + ++ + +GL++L +H+++ S
Sbjct: 80 SICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSN 135
Query: 400 ILVDEDFDARIMDFGFSR---------------------LTNGDASLQKDVHGFGVVLLE 438
ILV+ + ++ DFG S L S+Q D+ G+ L+E
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 439 LVTGQKPFEINASEE----------------------------GYKGNLVNWIDQLSSSG 470
+ G+ P ++E Y + +
Sbjct: 196 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD 255
Query: 471 RIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
I + L + E F+ KC+ P E+ + Q+
Sbjct: 256 YIVNEPPPKLPSGVFSLEFQDFVN---KCLIKNPAERADLKQL 295
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 2e-24
Identities = 42/270 (15%), Positives = 83/270 (30%), Gaps = 66/270 (24%)
Query: 294 GTTYKAMLLD---GSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL---------- 337
GT K +A+K L + L E + L +P +
Sbjct: 21 GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE 80
Query: 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
LV + G L L N + + + + + + G+ +L +H+++++
Sbjct: 81 SWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNF---VHRDLAA 135
Query: 398 SVILVDEDFDARIMDFGFSR--------------------------LTNGDASLQKDVHG 431
+L+ A+I DFG S+ + S + DV
Sbjct: 136 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 195
Query: 432 FGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEIL 490
FGV++ E + GQKP+ E + +++K
Sbjct: 196 FGVLMWEAFSYGQKPYRGMKGSE------------------VTAMLEKGERMGCPAGCPR 237
Query: 491 QFLQIACKCVAVRPKEKWSMYQVYISLCSI 520
+ + C + + V + L +
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRLRNY 267
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 101 bits (251), Expect = 3e-24
Identities = 52/295 (17%), Positives = 92/295 (31%), Gaps = 86/295 (29%)
Query: 294 GTTYKAMLL------DGSMLAIKRLS--ACKLGEKQFLLEMKQVGLLKHPNLEKP----- 340
G ++A +M+A+K L A + F E + +PN+ K
Sbjct: 27 GRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 86
Query: 341 ------LVYKYMSNGTLYSLLHSNG----------------------NTALDWPSRLRIG 372
L+++YM+ G L L S L +L I
Sbjct: 87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIA 146
Query: 373 LGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK----- 427
A G+++L +H+++++ LV E+ +I DFG SR +
Sbjct: 147 RQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDA 203
Query: 428 --------------------DVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLS 467
DV +GVVL E+ + Y G +
Sbjct: 204 IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP--------YYGMAHEEVIYYV 255
Query: 468 SSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522
G I ++ L+ + C + P ++ S ++ L + E
Sbjct: 256 RDGNILACP---------ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 3e-24
Identities = 52/287 (18%), Positives = 89/287 (31%), Gaps = 65/287 (22%)
Query: 280 SNFSAQNVLVSTWTGTTYKAMLLDGS-----MLAIKRLSACKL--GEKQFLLEMKQVGLL 332
S + Q V+ + G YK ML S +AIK L A FL E +G
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66
Query: 333 KHPNL-----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSW 381
H N+ ++ +YM NG L L + + G A G+
Sbjct: 67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGM-- 123
Query: 382 LHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK-------------- 427
+ + +H+++++ ILV+ + ++ DFG SR+ D
Sbjct: 124 -KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 182
Query: 428 ------------DVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475
DV FG+V+ E++T + S +
Sbjct: 183 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----------------EVMKA 225
Query: 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522
I+ D Q+ +C + + L +
Sbjct: 226 INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 99.7 bits (248), Expect = 9e-24
Identities = 43/258 (16%), Positives = 84/258 (32%), Gaps = 60/258 (23%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE----KQFLLEMKQVGLLKHPNL----------- 337
G Y A + + ++AIK++S + + E++ + L+HPN
Sbjct: 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88
Query: 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
LV +Y L L + GA +GL++LH +H+++ +
Sbjct: 89 TAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKA 143
Query: 398 SVILVDEDFDARIMDFGFSRLTN----------------------GDASLQKDVHGFGVV 435
IL+ E ++ DFG + + G + DV G+
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203
Query: 436 LLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQI 495
+EL + P + I AL + + F+
Sbjct: 204 CIELAERKPPLFNMNAMSALY--------------HIAQNESPALQSGHWSEYFRNFVD- 248
Query: 496 ACKCVAVRPKEKWSMYQV 513
C+ P+++ + +
Sbjct: 249 --SCLQKIPQDRPTSEVL 264
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.8 bits (243), Expect = 2e-23
Identities = 47/260 (18%), Positives = 87/260 (33%), Gaps = 59/260 (22%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEK---------- 339
T YK + + +A L KL + ++F E + + L+HPN+ +
Sbjct: 23 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK 82
Query: 340 -----PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
LV + M++GTL + L + +GL +LH PP +H++
Sbjct: 83 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRD 139
Query: 395 ISSSVILV-DEDFDARIMDFGFSRLTNGD--------------------ASLQKDVHGFG 433
+ I + +I D G + L DV+ FG
Sbjct: 140 LKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFG 199
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFL 493
+ +LE+ T + P+ SE + + V +
Sbjct: 200 MCMLEMATSEYPY----SECQNAAQIYRRVTSGVKPASFDKVAIP------------EVK 243
Query: 494 QIACKCVAVRPKEKWSMYQV 513
+I C+ E++S+ +
Sbjct: 244 EIIEGCIRQNKDERYSIKDL 263
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.3 bits (239), Expect = 8e-23
Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 64/273 (23%)
Query: 294 GTTYKAMLL---DGSMLAIKRL--SACKLGEKQFLLEMKQVGLLKHPNLEKP-------- 340
G+ + + +AIK L K ++ + E + + L +P + +
Sbjct: 23 GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA 82
Query: 341 --LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
LV + G L+ L + + + + G+ +L +H+++++
Sbjct: 83 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAAR 138
Query: 399 VILVDEDFDARIMDFGFSRLTNGDASLQK--------------------------DVHGF 432
+L+ A+I DFG S+ D S DV +
Sbjct: 139 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 198
Query: 433 GVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQ 491
GV + E ++ GQKP++ E + I++ + + +
Sbjct: 199 GVTMWEALSYGQKPYKKMKGPE------------------VMAFIEQGKRMECPPECPPE 240
Query: 492 FLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524
+ C + +++ V + + L
Sbjct: 241 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.7 bits (235), Expect = 3e-22
Identities = 39/261 (14%), Positives = 81/261 (31%), Gaps = 61/261 (23%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGE-KQFLLEMKQVGLLKHPNLEK-----------P 340
G YKA + + A K + E + +++E+ + HPN+ K
Sbjct: 26 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 85
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
++ ++ + G + +++ L + L++LH +H+++ + I
Sbjct: 86 ILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNI 141
Query: 401 LVDEDFDARIMDFGFSRLTNGDASLQK----------------------------DVHGF 432
L D D ++ DFG S + DV
Sbjct: 142 LFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 201
Query: 433 GVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQF 492
G+ L+E+ + P + L+ + F
Sbjct: 202 GITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-------------SRWSSNFKDF 248
Query: 493 LQIACKCVAVRPKEKWSMYQV 513
L+ KC+ +W+ Q+
Sbjct: 249 LK---KCLEKNVDARWTTSQL 266
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.9 bits (230), Expect = 2e-21
Identities = 46/286 (16%), Positives = 94/286 (32%), Gaps = 63/286 (22%)
Query: 280 SNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIK------RLSACKLGEKQFLLEMKQVGLL 332
+ F VL S GT YK + + +G + I R + K+ L E + +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 333 KHPNL----------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWL 382
+P++ L+ + M G L + + + L + A+G+
Sbjct: 69 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI-GSQYLLNWCVQIAKGM--- 124
Query: 383 HHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR------------------------- 417
++ +H+++++ +LV +I DFG ++
Sbjct: 125 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 418 LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477
+ + + Q DV +GV + EL+T Y G + I +++
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKP--------YDGI---------PASEISSILE 227
Query: 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523
K + I KC + + ++ I +A
Sbjct: 228 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.8 bits (225), Expect = 4e-21
Identities = 46/257 (17%), Positives = 83/257 (32%), Gaps = 61/257 (23%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLG----EKQFLLEMKQVGLLKHPNL----------- 337
G Y A +LA+K L +L E Q E++ L+HPN+
Sbjct: 20 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 79
Query: 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
L+ +Y GT+Y L D A LS+ H +H++I
Sbjct: 80 RVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVIHRDIKP 134
Query: 398 SVILVDEDFDARIMDFGFSR---------------------LTNGDASLQKDVHGFGVVL 436
+L+ + +I DFG+S + + D+ GV+
Sbjct: 135 ENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 194
Query: 437 LELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIA 496
E + G+ PFE N + + R++ + +
Sbjct: 195 YEFLVGKPPFEAN-----------TYQETYKRISRVEFTFP-----DFVTEGARDLIS-- 236
Query: 497 CKCVAVRPKEKWSMYQV 513
+ + P ++ + +V
Sbjct: 237 -RLLKHNPSQRPMLREV 252
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.0 bits (225), Expect = 5e-21
Identities = 44/270 (16%), Positives = 88/270 (32%), Gaps = 61/270 (22%)
Query: 294 GTTYKAMLLD----GSMLAIKRLSACKLGE--KQFLLEMKQVGLLKHPNLEK-------- 339
G ++ + + +AIK C ++FL E + HP++ K
Sbjct: 21 GDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN 80
Query: 340 --PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
++ + + G L S L + LD S + + L++L +H++I++
Sbjct: 81 PVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAA 136
Query: 398 SVILVDEDFDARIMDFGFSRLTNGDASLQK------------------------DVHGFG 433
+LV + ++ DFG SR + DV FG
Sbjct: 137 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 196
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFL 493
V + E++ + I ++ + R+ + +
Sbjct: 197 VCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMP-------PNCPPTLYSLM 242
Query: 494 QIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523
KC A P + ++ L +I E+
Sbjct: 243 T---KCWAYDPSRRPRFTELKAQLSTILEE 269
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.8 bits (225), Expect = 8e-21
Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 58/260 (22%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQ-FLLEMKQVGLLKHPNL-----------EKP 340
GT Y AM + G +AI++++ + +K+ + E+ + K+PN+ E
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
+V +Y++ G+L ++ D + + L +LH +H++I S I
Sbjct: 94 VVMEYLAGGSLTDVVTETCM---DEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNI 147
Query: 401 LVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVVLL 437
L+ D ++ DFGF + S + D+ G++ +
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 207
Query: 438 ELVTGQKPFEINASEEGYKGNLVNWIDQLSS----SGRIKDVIDKALTGKGYD------- 486
E++ G+ P+ N +L + S +D +++ L D
Sbjct: 208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD---MDVEKRGSA 264
Query: 487 DEILQ--FLQIACKCVAVRP 504
E+LQ FL+IA ++ P
Sbjct: 265 KELLQHQFLKIAKPLSSLTP 284
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.8 bits (222), Expect = 1e-20
Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 66/265 (24%)
Query: 294 GTTYKAMLL----DGSMLAIKRLSACKLGEKQ----FLLEMKQVGLLKHPNL-------- 337
G + +A+K L L + + F+ E+ + L H NL
Sbjct: 22 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 81
Query: 338 --EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
+V + G+L L + + R + A G+ +L +H+++
Sbjct: 82 TPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 137
Query: 396 SSSVILVDEDFDARIMDFGFSR--------------------------LTNGDASLQKDV 429
++ +L+ +I DFG R L S D
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 430 HGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488
FGV L E+ T GQ+P+ + +++ ID+ + + +
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQ-----ILHKIDKEGERLPRPEDCPQDI-------- 244
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQV 513
+ +C A +P+++ + +
Sbjct: 245 ----YNVMVQCWAHKPEDRPTFVAL 265
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 90.9 bits (225), Expect = 1e-20
Identities = 41/257 (15%), Positives = 89/257 (34%), Gaps = 56/257 (21%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLL-EMKQVGLLKHPNL-----------EKP 340
G ++ G+ A K + +K+ + E++ + +L+HP L E
Sbjct: 40 GVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV 99
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
++Y++MS G L+ + N + + +GL +H +H ++ I
Sbjct: 100 MIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENI 155
Query: 401 LVDEDFDARIM--DFGFSRLTNGDASLQK----------------------DVHGFGVVL 436
+ + DFG + + S++ D+ GV+
Sbjct: 156 MFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 215
Query: 437 LELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIA 496
L++G PF +E + + S + D G ++ F++
Sbjct: 216 YILLSGLSPFGGENDDETLR-------NVKSCDWNMDDSAF-----SGISEDGKDFIR-- 261
Query: 497 CKCVAVRPKEKWSMYQV 513
K + P + +++Q
Sbjct: 262 -KLLLADPNTRMTIHQA 277
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.3 bits (223), Expect = 2e-20
Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 80/281 (28%)
Query: 294 GTTYKAMLL------DGSMLAIKRL--SACKLGEKQFLLEMKQVGLLK-HPNL------- 337
G +A +A+K L SA + + E+K + L H N+
Sbjct: 37 GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 96
Query: 338 ----EKPLVYKYMSNGTLYSLLHSNGNT----------------ALDWPSRLRIGLGAAR 377
++ +Y G L + L ++ ALD L A+
Sbjct: 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK 156
Query: 378 GLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR-------------------- 417
G+++L C+H+++++ IL+ +I DFG +R
Sbjct: 157 GMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKW 213
Query: 418 -----LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472
+ N + + DV +G+ L EL + + +
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSS----------------PYPGMPVDSKF 257
Query: 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
+I + + + I C P ++ + Q+
Sbjct: 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.4 bits (216), Expect = 9e-20
Identities = 40/230 (17%), Positives = 73/230 (31%), Gaps = 47/230 (20%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL----------- 337
T A L AIK L + E + L HP
Sbjct: 22 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 81
Query: 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
+ Y NG L + G+ D A +S L + +H+++
Sbjct: 82 KLYFGLSYAKNGELLKYIRKIGS--FDETCTRFY---TAEIVSALEYLHGKGIIHRDLKP 136
Query: 398 SVILVDEDFDARIMDFGFSRLTNGDASLQK-------------------------DVHGF 432
IL++ED +I DFG +++ + ++ + D+
Sbjct: 137 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 196
Query: 433 GVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-SGRIKDVIDKALT 481
G ++ +LV G PF ++ + D + +D+++K L
Sbjct: 197 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 246
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.0 bits (215), Expect = 1e-19
Identities = 41/260 (15%), Positives = 84/260 (32%), Gaps = 61/260 (23%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE--KQFLLEMKQVGLLKHPNL-----------EK 339
G A+ +A+K + + + + E+ +L H N+ +
Sbjct: 19 GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 78
Query: 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
L +Y S G L+ + + + P R G+ +LH H++I
Sbjct: 79 YLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPEN 133
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK--------------------------DVHGFG 433
+L+DE + +I DFG + + + + DV G
Sbjct: 134 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 193
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFL 493
+VL ++ G+ P++ + + L+ +I D L L
Sbjct: 194 IVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-------------DSAPLALL 240
Query: 494 QIACKCVAVRPKEKWSMYQV 513
K + P + ++ +
Sbjct: 241 H---KILVENPSARITIPDI 257
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.2 bits (215), Expect = 1e-19
Identities = 57/296 (19%), Positives = 99/296 (33%), Gaps = 77/296 (26%)
Query: 294 GTTYKAML------LDGSMLAIKRL--SACKLGEKQFLLEMKQVGLLKHPNL-------- 337
G Y+ + + +AIK + +A +FL E + ++
Sbjct: 34 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 93
Query: 338 ---EKPLVYKYMSNGTLYSLLHSNGN--------TALDWPSRLRIGLGAARGLSWLHHCC 386
++ + M+ G L S L S +++ A G + +
Sbjct: 94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG---MAYLN 150
Query: 387 HPPCLHQNISSSVILVDEDFDARIMDFGFSR-------------------------LTNG 421
+H+++++ +V EDF +I DFG +R L +G
Sbjct: 151 ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG 210
Query: 422 DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481
+ DV FGVVL E+ T + Y+G + + G + D D
Sbjct: 211 VFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEGGLLDKPDNCPD 262
Query: 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSE--FY--EEN 533
++ C PK + S ++ S+ E GF E FY EEN
Sbjct: 263 ---------MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP-GFREVSFYYSEEN 308
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 87.4 bits (216), Expect = 1e-19
Identities = 40/256 (15%), Positives = 79/256 (30%), Gaps = 53/256 (20%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLG--EKQFLLEMKQVGLLKHPNLEKP---------- 340
A ++AIK ++ L E E+ + +KHPN+
Sbjct: 23 SEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHL 82
Query: 341 -LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
L+ + +S G L+ + G R+ + +LH + +
Sbjct: 83 YLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 140
Query: 400 ILVDEDFDARIMDFGFSRLTNGDASLQK----------------------DVHGFGVVLL 437
+DED I DFG S++ + + L D GV+
Sbjct: 141 YSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 200
Query: 438 ELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIAC 497
L+ G PF + ++ ++ + S D F++
Sbjct: 201 ILLCGYPPFYDENDAKLFE-QILKAEYEFDSPYW-----------DDISDSAKDFIR--- 245
Query: 498 KCVAVRPKEKWSMYQV 513
+ P+++++ Q
Sbjct: 246 HLMEKDPEKRFTCEQA 261
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.5 bits (216), Expect = 2e-19
Identities = 46/287 (16%), Positives = 86/287 (29%), Gaps = 87/287 (30%)
Query: 294 GTTYKAMLLDGS------MLAIKRLS--ACKLGEKQFLLEMKQVG-LLKHPNL------- 337
G A S +A+K L A + + E+K + L H N+
Sbjct: 51 GKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 110
Query: 338 ----EKPLVYKYMSNGTLYSLLHSNGN---------------------TALDWPSRLRIG 372
L+++Y G L + L S L + L
Sbjct: 111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFA 170
Query: 373 LGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR--------------- 417
A+G+ +L C+H+++++ +LV +I DFG +R
Sbjct: 171 YQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNAR 227
Query: 418 ----------LTNGDASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQL 466
L G +++ DV +G++L E+ + G P+ +
Sbjct: 228 LPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY-----------------PGI 270
Query: 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
+I + I C A +++ S +
Sbjct: 271 PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL 317
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.6 bits (214), Expect = 3e-19
Identities = 30/256 (11%), Positives = 81/256 (31%), Gaps = 55/256 (21%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPL 341
G ++ + K + + E+ + + +H N+ E +
Sbjct: 19 GIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401
+++++S ++ ++++ L+ + L +LH H +I I+
Sbjct: 79 IFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENII 134
Query: 402 VDEDFDAR--IMDFGFSRLTNGDASLQK----------------------DVHGFGVVLL 437
+ I++FG +R + + D+ G ++
Sbjct: 135 YQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY 194
Query: 438 ELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIAC 497
L++G PF +++ + N++N K E + F+
Sbjct: 195 VLLSGINPFLAETNQQIIE-NIMNAEYTFDEEAF-----------KEISIEAMDFVD--- 239
Query: 498 KCVAVRPKEKWSMYQV 513
+ + K + + +
Sbjct: 240 RLLVKERKSRMTASEA 255
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 86.7 bits (214), Expect = 4e-19
Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 56/257 (21%)
Query: 294 GTTYKAM-LLDGSMLAIKRLS-ACKLGEKQFLLEMKQVGLLKHPNL-----------EKP 340
G ++ + G + K ++ L + E+ + L HP L E
Sbjct: 43 GVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV 102
Query: 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVI 400
L+ +++S G L+ + + + + A GL +H +H +I I
Sbjct: 103 LILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENI 158
Query: 401 LVDEDFDARIM--DFGFSR----------------------LTNGDASLQKDVHGFGVVL 436
+ + + + DFG + + D+ GV+
Sbjct: 159 MCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 218
Query: 437 LELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIA 496
L++G PF + ++ L + R D+ E F++
Sbjct: 219 YVLLSGLSPFAGE-----------DDLETLQNVKRCDWEFDEDAF-SSVSPEAKDFIK-- 264
Query: 497 CKCVAVRPKEKWSMYQV 513
+ P+++ +++
Sbjct: 265 -NLLQKEPRKRLTVHDA 280
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.9 bits (212), Expect = 5e-19
Identities = 34/261 (13%), Positives = 79/261 (30%), Gaps = 58/261 (22%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEKP------------ 340
G + A+K L C ++ L + + P++ +
Sbjct: 26 GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWR---ASQCPHIVRIVDVYENLYAGRK 82
Query: 341 ---LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
+V + + G L+S + G+ A I + +LH H+++
Sbjct: 83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA---HRDVKP 139
Query: 398 SVILVD---EDFDARIMDFGFSR----------------------LTNGDASLQKDVHGF 432
+L + ++ DFGF++ L D+
Sbjct: 140 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 199
Query: 433 GVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQF 492
GV++ L+ G PF Y + + + + R+ +E+
Sbjct: 200 GVIMYILLCGYPPF--------YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 251
Query: 493 LQIACKCVAVRPKEKWSMYQV 513
++ + P ++ ++ +
Sbjct: 252 IR---NLLKTEPTQRMTITEF 269
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.0 bits (204), Expect = 3e-18
Identities = 53/288 (18%), Positives = 92/288 (31%), Gaps = 81/288 (28%)
Query: 294 GTTYKAMLL--------DGSMLAIKRLSACKL--GEKQFLLEMKQVG-LLKHPNLEKP-- 340
G A + + +A+K L + + EM+ + + KH N+
Sbjct: 27 GQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG 86
Query: 341 ---------LVYKYMSNGTLYSLLH--------------SNGNTALDWPSRLRIGLGAAR 377
++ +Y S G L L N L + AR
Sbjct: 87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 146
Query: 378 GLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR-------------------- 417
G+ + C+H+++++ +LV ED +I DFG +R
Sbjct: 147 GM---EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 203
Query: 418 -----LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472
L + + Q DV FGV+L E+ T Y G V + +L G
Sbjct: 204 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFKLLKEGHR 255
Query: 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520
D +E+ ++ C P ++ + Q+ L I
Sbjct: 256 MDKPSN------CTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 83.2 bits (205), Expect = 6e-18
Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 50/246 (20%)
Query: 281 NFSAQNVLVSTWTGTTYKAMLLD-GSMLAIKRLSACKLGEKQ-------FLLEMKQVGLL 332
+FS ++ G Y D G M A+K L ++ KQ + + V
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 333 KHPNLEK-----------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSW 381
P + + M+ G L+ L +G GL
Sbjct: 65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF--SEADMRFYAAEIILGLEH 122
Query: 382 LHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK-------------- 427
+H+ +++++ + IL+DE RI D G + +
Sbjct: 123 MHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK 179
Query: 428 --------DVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS----SGRIKDV 475
D G +L +L+ G PF + +++ ++ + + + S ++ +
Sbjct: 180 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 239
Query: 476 IDKALT 481
++ L
Sbjct: 240 LEGLLQ 245
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 81.9 bits (201), Expect = 8e-18
Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 59/271 (21%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL-----------EK 339
G YKA G A+K++ K E + E+ + LKH N+
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
LV++++ L G L+ + L G+ +C LH+++
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGI---AYCHDRRVLHRDLKPQN 130
Query: 400 ILVDEDFDARIMDFGFSR------------------------LTNGDASLQKDVHGFGVV 435
+L++ + + +I DFG +R + + S D+ G +
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 436 LLELVTGQKPFEINASEE--------GYKGNLVNWID-----QLSSSGRIKDVIDKALTG 482
E+V G F + + N NW + + + + + +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
KG D+ + L K + + P ++ + Q
Sbjct: 251 KGLDESGIDLLS---KMLKLDPNQRITAKQA 278
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.1 bits (197), Expect = 2e-17
Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 71/271 (26%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE----------KQFLLEMKQVGLLK-HPNLEKP- 340
+ + A+K + G + L E+ + + HPN+ +
Sbjct: 17 SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLK 76
Query: 341 ----------LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPC 390
LV+ M G L+ L L +I + LH
Sbjct: 77 DTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLN---I 131
Query: 391 LHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK----------------------- 427
+H+++ IL+D+D + ++ DFGFS + L++
Sbjct: 132 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPG 191
Query: 428 -----DVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482
D+ GV++ L+ G PF + + +++ Q S
Sbjct: 192 YGKEVDMWSTGVIMYTLLAGSPPFW-HRKQMLMLRMIMSGNYQFGSP-----------EW 239
Query: 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
Y D + + + + V+P+++++ +
Sbjct: 240 DDYSDTVKDLVS---RFLVVQPQKRYTAEEA 267
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 79.4 bits (195), Expect = 7e-17
Identities = 35/225 (15%), Positives = 82/225 (36%), Gaps = 42/225 (18%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE----KQFLLEMKQVGLLKHPNL----------- 337
G + +G A+K L + + E + ++ HP +
Sbjct: 18 GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ 77
Query: 338 EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
+ ++ Y+ G L+SLL + + L + +++++
Sbjct: 78 QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV-----CLALEYLHSKDIIYRDLKP 132
Query: 398 SVILVDEDFDARIMDFGFSR--------------------LTNGDASLQKDVHGFGVVLL 437
IL+D++ +I DFGF++ ++ + D FG+++
Sbjct: 133 ENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIY 192
Query: 438 ELVTGQKPFEINASEEGYKGNLVNWIDQLSS-SGRIKDVIDKALT 481
E++ G PF + + + Y+ L + + +KD++ + +T
Sbjct: 193 EMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLIT 237
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.4 bits (192), Expect = 1e-16
Identities = 42/289 (14%), Positives = 87/289 (30%), Gaps = 79/289 (27%)
Query: 294 GTTYKAMLL------DGSMLAIKRLSACKL--GEKQFLLEMKQVGLLKHPNL-------- 337
G +A +A+K L + + E+K + + H
Sbjct: 27 GQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 86
Query: 338 -----EKPLVYKYMSNGTLYSLLHSNGN--------------TALDWPSRLRIGLGAARG 378
++ ++ G L + L S N L + A+G
Sbjct: 87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG 146
Query: 379 LSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR--------------------- 417
+ +L C+H+++++ IL+ E +I DFG +R
Sbjct: 147 MEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 203
Query: 418 ----LTNGDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473
+ + ++Q DV FGV+L E+ + + + G
Sbjct: 204 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-------PGVKIDEEFCRRLKEGTRM 256
Query: 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522
D E+ Q + C P ++ + ++ L ++ +
Sbjct: 257 RAPDY------TTPEMYQTML---DCWHGEPSQRPTFSELVEHLGNLLQ 296
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 77.9 bits (191), Expect = 1e-16
Identities = 42/239 (17%), Positives = 82/239 (34%), Gaps = 56/239 (23%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE----KQFLLEMKQVGLLKHPNLEKP-------- 340
+ A L +A+K L A + +F E + L HP +
Sbjct: 21 SEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET 80
Query: 341 -------LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQ 393
+V +Y+ TL ++H+ G + + + A + L + +H+
Sbjct: 81 PAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQAL---NFSHQNGIIHR 135
Query: 394 NISSSVILVDEDFDARIMDFGFSR--------------------------LTNGDASLQK 427
++ + I++ ++MDFG +R +
Sbjct: 136 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 195
Query: 428 DVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-----SGRIKDVIDKALT 481
DV+ G VL E++TG+ PF ++ ++ S+ S + V+ KAL
Sbjct: 196 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 254
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.6 bits (193), Expect = 1e-16
Identities = 43/229 (18%), Positives = 72/229 (31%), Gaps = 46/229 (20%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGEKQ----FLLEMKQVGL-LKHPNL---------- 337
G + A AIK L + ++E + + L +HP L
Sbjct: 16 GKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK 75
Query: 338 -EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396
V +Y++ G L + S D GL +++++
Sbjct: 76 ENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGL---QFLHSKGIVYRDLK 130
Query: 397 SSVILVDEDFDARIMDFGFSR-----------------------LTNGDASLQKDVHGFG 433
IL+D+D +I DFG + L + D FG
Sbjct: 131 LDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFG 190
Query: 434 VVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-SGRIKDVIDKALT 481
V+L E++ GQ PF EE + ++ KD++ K
Sbjct: 191 VLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 239
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.7 bits (193), Expect = 2e-16
Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 37/224 (16%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEK----QFLLEMKQVGLLKHPNLEKPLVYKYMSN 348
G G A+K L + K + E + + +HP L L Y + ++
Sbjct: 19 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA-LKYAFQTH 77
Query: 349 GTLYSLLHSNGNTALDW-------PSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401
L ++ L + + R A +S L + ++++I ++
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM 137
Query: 402 VDEDFDARIMDFGFSR-----------------------LTNGDASLQKDVHGFGVVLLE 438
+D+D +I DFG + L + D D G GVV+ E
Sbjct: 138 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 439 LVTGQKPFEINASEEGYKGNLVNWIDQLSS-SGRIKDVIDKALT 481
++ G+ PF E ++ L+ I + S K ++ L
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.8 bits (188), Expect = 4e-16
Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 62/274 (22%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE------KQFLLEMKQVGLLKHPNLEKP------ 340
T YKA ++AIK++ E + L E+K + L HPN+
Sbjct: 12 ATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH 71
Query: 341 -----LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
LV+ +M + ++ L L +GL + LH+++
Sbjct: 72 KSNISLVFDFMETDLEVIIKDNSLV--LTPSHIKAYMLMTLQGL---EYLHQHWILHRDL 126
Query: 396 SSSVILVDEDFDARIMDFGFSRLTNGDASLQK------------------------DVHG 431
+ +L+DE+ ++ DFG ++ D+
Sbjct: 127 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA 186
Query: 432 FGVVLLELVTGQKPFEINASEE--------GYKGNLVNWIDQLSSSGRIK----DVIDKA 479
G +L EL+ ++ + W D S + I
Sbjct: 187 VGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH 246
Query: 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
D++L +Q P + + Q
Sbjct: 247 HIFSAAGDDLLDLIQ---GLFLFNPCARITATQA 277
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 5e-16
Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 41/192 (21%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL----------EK 339
G YKA L G ++A+K++ E + E+ + L HPN+ K
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 340 PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSV 399
+ + L + ++ T + P +GL C LH+++
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL---AFCHSHRVLHRDLKPQN 132
Query: 400 ILVDEDFDARIMDFGFSR------------------------LTNGDASLQKDVHGFGVV 435
+L++ + ++ DFG +R L S D+ G +
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 436 LLELVTGQKPFE 447
E+VT + F
Sbjct: 193 FAEMVTRRALFP 204
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 9e-16
Identities = 46/280 (16%), Positives = 92/280 (32%), Gaps = 69/280 (24%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE--KQFLLEMKQVGLLKHPNL------------- 337
G A ++ +AIK++S + ++ L E+K + +H N+
Sbjct: 22 GMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE 81
Query: 338 --EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNI 395
+ + ++ LY LL + L RGL ++H LH+++
Sbjct: 82 QMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSA---NVLHRDL 135
Query: 396 SSSVILVDEDFDARIMDFGFSRLTNGD---------------------------ASLQKD 428
S +L++ D +I DFG +R+ + D + D
Sbjct: 136 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 195
Query: 429 VHGFGVVLLELVTGQKPFE---------------INASEEGYKGNLVNWIDQLSSSGRIK 473
+ G +L E+++ + F + S+E + S K
Sbjct: 196 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK 255
Query: 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
+ + D + L L K + P ++ + Q
Sbjct: 256 NKVPWNRLFPNADSKALDLLD---KMLTFNPHKRIEVEQA 292
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.2 bits (184), Expect = 2e-15
Identities = 42/273 (15%), Positives = 84/273 (30%), Gaps = 59/273 (21%)
Query: 294 GTTYKAMLLD-GSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEK------------- 339
G Y+A L D G ++AIK++ ++ E++ + L H N+ +
Sbjct: 34 GVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 340 ----PLVYKYMSNGTLYSLLH-SNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
LV Y+ H S L R L+++H H++
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRD 147
Query: 395 ISSSVILVDED-FDARIMDFGFSRLTNGDASLQK-----------------------DVH 430
I +L+D D ++ DFG ++ DV
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVW 207
Query: 431 GFGVVLLELVTGQKPFEINASEEGYK----------GNLVNWIDQLSSSGRIKDVIDKAL 480
G VL EL+ GQ F ++ + + ++ + + +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 267
Query: 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
T + + + + + P + + +
Sbjct: 268 TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.6 bits (177), Expect = 1e-14
Identities = 45/284 (15%), Positives = 91/284 (32%), Gaps = 69/284 (24%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEKP--------- 340
G +KA G +A+K++ E L E+K + LLKH N+
Sbjct: 24 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 83
Query: 341 ----------LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPC 390
LV+ + + L + L R+ L L+ L++
Sbjct: 84 PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML-----LNGLYYIHRNKI 138
Query: 391 LHQNISSSVILVDEDFDARIMDFGFSR----------------------------LTNGD 422
LH+++ ++ +L+ D ++ DFG +R L D
Sbjct: 139 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERD 198
Query: 423 ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK------GNLVNWIDQLSSSGRIKDVI 476
D+ G G ++ E+ T + N + G++ + + + + +
Sbjct: 199 YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL 258
Query: 477 DKALTGKGYDDEIL-------QFLQIACKCVAVRPKEKWSMYQV 513
+ K + L L + K + + P ++
Sbjct: 259 ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.1 bits (173), Expect = 3e-14
Identities = 36/273 (13%), Positives = 74/273 (27%), Gaps = 61/273 (22%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL-----------E 338
GT +KA ++A+KR+ E L E+ + LKH N+ +
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
LV+++ NG+ + + L L C LH+++
Sbjct: 76 LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF-----LFQLLKGLGFCHSRNVLHRDLKPQ 130
Query: 399 VILVDEDFDARIMDFGFSRLTNGDASLQK------------------------DVHGFGV 434
+L++ + + ++ +FG +R D+ G
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC 190
Query: 435 VLLELVTGQKPFEINASEEGYKGNLVNW--------------IDQLSSSGRIKDVIDKAL 480
+ EL +P + + +
Sbjct: 191 IFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVN 250
Query: 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
+ LQ + P ++ S +
Sbjct: 251 VVPKLNATGRDLLQ---NLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 71.8 bits (175), Expect = 3e-14
Identities = 39/225 (17%), Positives = 80/225 (35%), Gaps = 42/225 (18%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE----KQFLLEMKQVGLLKHPNLEK--------- 339
G G+ A+K L K+ + + L E + + + P L K
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 340 --PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
+V +Y++ G ++S L G P +LH +++++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 398 SVILVDEDFDARIMDFGFSR--------------------LTNGDASLQKDVHGFGVVLL 437
+L+D+ ++ DFGF++ + + + D GV++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229
Query: 438 ELVTGQKPFEINASEEGYKGNLVNWIDQLSS-SGRIKDVIDKALT 481
E+ G PF + + Y+ + + S S +KD++ L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.1 bits (173), Expect = 4e-14
Identities = 44/273 (16%), Positives = 84/273 (30%), Gaps = 56/273 (20%)
Query: 294 GTTYKAMLL--DGSMLAIKRLSACKLGEKQFLLEMKQVGLLK------HPNL-------- 337
G +KA L G +A+KR+ E L +++V +L+ HPN+
Sbjct: 21 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 80
Query: 338 -------EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPC 390
K + + L + L + + + RGL +LH
Sbjct: 81 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---V 137
Query: 391 LHQNISSSVILVDEDFDARIMDFGFSR----------------------LTNGDASLQKD 428
+H+++ ILV ++ DFG +R L + D
Sbjct: 138 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVD 197
Query: 429 VHGFGVVLLELVTGQKPFEINASEEGYK--------GNLVNWIDQLSSSGRIKDVIDKAL 480
+ G + E+ + F ++ + +W ++ +
Sbjct: 198 LWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQP 257
Query: 481 TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
K D + KC+ P ++ S Y
Sbjct: 258 IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.1 bits (168), Expect = 2e-13
Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 47/235 (20%)
Query: 294 GTTYKAMLL----DGSMLAIKRLSACKLGEK-----QFLLEMKQVGLLKHPNLEKPLVYK 344
G + + G + A+K L + +K E + + ++ L Y
Sbjct: 38 GKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA 97
Query: 345 YMSNGTLYSLLHSNGNTALDW-------PSRLRIGLGAARGLSWLHHCCHPPCLHQNISS 397
+ + L+ +L L + + + + L H ++++I
Sbjct: 98 FQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKL 157
Query: 398 SVILVDEDFDARIMDFGFSRLTNGDASLQK--------------------------DVHG 431
IL+D + + DFG S+ D + + D
Sbjct: 158 ENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWS 217
Query: 432 FGVVLLELVTGQKPF----EINASEEGYKGNLVNWIDQLSS-SGRIKDVIDKALT 481
GV++ EL+TG PF E N+ E + L + S KD+I + L
Sbjct: 218 LGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLM 272
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 68.7 bits (167), Expect = 2e-13
Identities = 40/282 (14%), Positives = 83/282 (29%), Gaps = 61/282 (21%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPL 341
G Y + G +AIK K Q +E K +++ + +
Sbjct: 21 GDIYLGTDIAAGEEVAIKLECV-KTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVIL 401
+ + +L L + + L + + ++H +H+++ L
Sbjct: 80 MVMELLGPSLEDLFNFCSRK-FSLKTVLLLADQMISRIEYIHSKNF---IHRDVKPDNFL 135
Query: 402 V---DEDFDARIMDFGFSR------------------------------LTNGDASLQKD 428
+ + I+DFG ++ + S + D
Sbjct: 136 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 195
Query: 429 VHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDE 488
+ G VL+ G P++ + + K + KGY E
Sbjct: 196 LESLGYVLMYFNLGSLPWQGLKAA--------TKRQKYERISEKKMSTPIEVLCKGYPSE 247
Query: 489 ILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFY 530
+L C ++R +K + ++ + GFS Y
Sbjct: 248 FATYLN---FCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 286
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 68.3 bits (166), Expect = 3e-13
Identities = 31/283 (10%), Positives = 69/283 (24%), Gaps = 61/283 (21%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEKPLVYKYMSNGTLY 352
G ++ LL+ +AIK + Q E + LL + Y
Sbjct: 19 GVIFEGTNLLNNQQVAIKFEPR-RSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77
Query: 353 ----------SLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILV 402
L + + +H ++++I L+
Sbjct: 78 LVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL---VYRDIKPDNFLI 134
Query: 403 DEDFD-----ARIMDFGFSRLTNGDASLQK------------------------------ 427
++DFG + + Q
Sbjct: 135 GRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRD 194
Query: 428 DVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDD 487
D+ G V + + G P++ + +++ G K G+ +
Sbjct: 195 DLEALGHVFMYFLRGSLPWQGLKAA-----TNKQKYERI---GEKKQSTPLRELCAGFPE 246
Query: 488 EILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEFY 530
E +++ + + + E+L +E
Sbjct: 247 EFYKYMH---YARNLAFDATPDYDYLQGLFSKVLERLNTTEDE 286
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.3 bits (166), Expect = 4e-13
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 49/195 (25%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL------------ 337
G A+ G+ +AIK+L E K+ E++ + ++H N+
Sbjct: 32 GAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET 91
Query: 338 -----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392
+ LV +M GT L + L + +GL ++H H
Sbjct: 92 LDDFTDFYLVMPFM--GTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYIHAAGII---H 144
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK---------------------DVHG 431
+++ + V+ED + +I+DFG +R + + + D+
Sbjct: 145 RDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWS 204
Query: 432 FGVVLLELVTGQKPF 446
G ++ E++TG+ F
Sbjct: 205 VGCIMAEMITGKTLF 219
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.4 bits (164), Expect = 5e-13
Identities = 40/232 (17%), Positives = 74/232 (31%), Gaps = 53/232 (22%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQ----VGLLK-----HPNL------ 337
G+ Y + + D +AIK + ++ + L + V LLK +
Sbjct: 18 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 77
Query: 338 -----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392
L+ + + L + HC + LH
Sbjct: 78 FERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAV---RHCHNCGVLH 133
Query: 393 QNISSSVILVDED-FDARIMDFGFSRLTNGDA----------------------SLQKDV 429
++I IL+D + + +++DFG L V
Sbjct: 134 RDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 193
Query: 430 HGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481
G++L ++V G PFE EE +G + + ++SS + +I L
Sbjct: 194 WSLGILLYDMVCGDIPFE--HDEEIIRGQV-FFRQRVSSE--CQHLIRWCLA 240
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 65.4 bits (158), Expect = 4e-12
Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 26/147 (17%)
Query: 43 CRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102
+ + L N + L+L +S P L L L L N + P
Sbjct: 229 NQLKDIGTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLT 285
Query: 103 -------------------WFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG 143
L L L N++S P + + L L+ + N++S
Sbjct: 286 ALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD 343
Query: 144 PLPPQLSSLVRLKQFSVAYNCLSGRIP 170
L++L + S +N +S P
Sbjct: 344 V--SSLANLTNINWLSAGHNQISDLTP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 60.0 bits (144), Expect = 3e-10
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 79 CKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSY 138
K+L L L NN+ P L L +NN +S L N +N L +
Sbjct: 306 LKNLTYLTLYFNNISDISPVSSL---TKLQRLFFANNKVSD--VSSLANLTNINWLSAGH 360
Query: 139 NRLSGPLPPQLSSLVRLKQFSVAYN 163
N++S P L++L R+ Q +
Sbjct: 361 NQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 6e-04
Identities = 36/149 (24%), Positives = 49/149 (32%), Gaps = 7/149 (4%)
Query: 41 FICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
N VS + L L N L +L L+L+ N L I T
Sbjct: 180 LDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-IGT-- 236
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
L LDL+NN +S P L L L L N++S P L+ L L +
Sbjct: 237 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 292
Query: 161 AYNCLSGRIPSFFNGAMKMDMLADSRLGG 189
N L P + L + +
Sbjct: 293 NENQLEDISPISNLKNLTYLTLYFNNISD 321
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (156), Expect = 5e-12
Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 55/238 (23%)
Query: 294 GTTYKAMLL-DGSMLAIKRLSACKLGE-------KQFLLEMKQVGLLKHPNLEKP----- 340
K G A K + + + E+ + ++HPN+
Sbjct: 24 AVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE 83
Query: 341 ------LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQN 394
L+ + ++ G L+ L + L G+ ++ H +
Sbjct: 84 NKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV---YYLHSLQIAHFD 138
Query: 395 ISSSVILVDEDFDAR----IMDFGFSR----------------------LTNGDASLQKD 428
+ I++ + + I+DFG + + L+ D
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 429 VHGFGVVLLELVTGQKPFEINASEEGYK---GNLVNWIDQLSS--SGRIKDVIDKALT 481
+ GV+ L++G PF + +E + D+ S S KD I + L
Sbjct: 199 MWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 62.8 bits (151), Expect = 2e-11
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 7/176 (3%)
Query: 10 EDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFICRFNGVSC-WNGLENRILSLELEEMN 67
D + L IK +P LSSW T + GV C + R+ +L+L +N
Sbjct: 5 PQDKQALLQIKKDLGNP-TTLSSWLPTTDCCN--RTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 68 LSG--QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL 125
L +P SL + L L + N L L +++ ++SG IP L
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 126 GNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181
L TL SYN LSG LPP +SSL L + N +SG IP + K+
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFT 177
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 59.0 bits (141), Expect = 4e-10
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 79 CKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSY 138
K+L L+L N ++G +P L + +L SL++S N+L G IP + GN + +
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQ-LKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYAN 300
Query: 139 NRL--SGPLPP 147
N+ PLP
Sbjct: 301 NKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 58.6 bits (140), Expect = 5e-10
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
L LDL NN + GT+P L +L++L +S+N L G + PQ +L R +
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFDVSAY 298
Query: 161 AYN-CLSG 167
A N CL G
Sbjct: 299 ANNKCLCG 306
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 49.7 bits (117), Expect = 3e-07
Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 41 FICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
GL + L+L + G +P+ L K L LN+S NNL G+IP
Sbjct: 229 AKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-- 286
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNC 128
+NN P L C
Sbjct: 287 GGNLQRFDVSAYANNKCLCGSP--LPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 45.5 bits (106), Expect = 8e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 132 NTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
N L L NR+ G LP L+ L L +V++N L G IP N
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.4 bits (140), Expect = 7e-10
Identities = 46/276 (16%), Positives = 93/276 (33%), Gaps = 65/276 (23%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNL------------ 337
G+ A G +A+K+LS K+ E++ + +KH N+
Sbjct: 32 GSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 91
Query: 338 ----EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQ 393
+ ++ L +++ L + RGL ++H H+
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADII---HR 145
Query: 394 NISSSVILVDEDFDARIMDFGFSR---------------------LTNGDASLQKDVHGF 432
++ S + V+ED + +I+DFG +R L + D+
Sbjct: 146 DLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205
Query: 433 GVVLLELVTGQKPFEINASEEGYK------GNLVNWIDQLSSSGRIKDVIDK-------- 478
G ++ EL+TG+ F + K G + + SS ++ I
Sbjct: 206 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN 265
Query: 479 -ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQV 513
A G + + L+ K + + ++ + Q
Sbjct: 266 FANVFIGANPLAVDLLE---KMLVLDSDKRITAAQA 298
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 58.3 bits (139), Expect = 8e-10
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 31 SWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTN 90
+ + + + + S ++ SL+ LN+S N
Sbjct: 235 YLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNN 294
Query: 91 NLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLS 150
L +L P L L S N L+ +P N L L++ YN L P
Sbjct: 295 KL-----IELPALPPRLERLIASFNHLA-EVPELPQN---LKQLHVEYNPLRE-FPDIPE 344
Query: 151 SLVRLK 156
S+ L+
Sbjct: 345 SVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 14/95 (14%)
Query: 51 WNGLENRILSLELEEMNLSGQVPESLQSC--KSLQVLNLSTNNLFGKIPTQLCKWFPYLV 108
W+ E E+ L+ C + L L+ L + L + P+L
Sbjct: 10 WSEWERNAPPGNGEQRE---MAVSRLRDCLDRQAHELELNNLGL-----SSLPELPPHLE 61
Query: 109 SLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG 143
SL S N L+ +P + L +L + N L
Sbjct: 62 SLVASCNSLT-ELPELPQS---LKSLLVDNNNLKA 92
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 56.4 bits (135), Expect = 3e-09
Identities = 26/191 (13%), Positives = 62/191 (32%), Gaps = 47/191 (24%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNLEK------------ 339
++A+ + + + +K L + +K+ E+K + L+ PN+
Sbjct: 49 SEVFEAINITNNEKVVVKILK--PVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 340 -PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398
LV+++++N L + L + L + H +
Sbjct: 107 PALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGI--MHRDVKPHN 159
Query: 399 VILVDEDFDARIMDFGFSRLTNGDASLQK-----------------------DVHGFGVV 435
V++ E R++D+G + + D+ G +
Sbjct: 160 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 219
Query: 436 LLELVTGQKPF 446
L ++ ++PF
Sbjct: 220 LASMIFRKEPF 230
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.5 bits (135), Expect = 3e-09
Identities = 33/196 (16%), Positives = 60/196 (30%), Gaps = 51/196 (26%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGE---KQFLLEMKQVGLLKHPNLEK---------- 339
G A + +AIK+LS + K+ E+ + + H N+
Sbjct: 31 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 90
Query: 340 -------PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLH 392
LV + M + D + G+ LH +H
Sbjct: 91 LEEFQDVYLVMELMDANLCQVIQMEL-----DHERMSYLLYQMLCGIKHLHSAG---IIH 142
Query: 393 QNISSSVILVDEDFDARIMDFGFSRLTNGDASLQK----------------------DVH 430
+++ S I+V D +I+DFG +R + D+
Sbjct: 143 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Query: 431 GFGVVLLELVTGQKPF 446
G ++ E+V + F
Sbjct: 203 SVGCIMGEMVRHKILF 218
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 51.3 bits (122), Expect = 3e-08
Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 21/144 (14%)
Query: 294 GTTYKAMLLDGSMLAIKRLSACKL-----------GEKQFLLEMKQVGLLKHPNLEK--- 339
+ +K G+ F + + + L+K
Sbjct: 14 SAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 73
Query: 340 ---PLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNIS 396
P VY + N L L+ + + + + ++ +H +H ++S
Sbjct: 74 LAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG---IVHGDLS 130
Query: 397 SSVILVDEDFDARIMDFGFSRLTN 420
+LV + I+DF S
Sbjct: 131 QYNVLVS-EEGIWIIDFPQSVEVG 153
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (122), Expect = 1e-07
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Query: 60 SLELEEMNLSGQ------VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWF---PYLVSL 110
SL+++ +++ + E L + QV+ L L + P L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG 143
+L +N+L H + + + + L
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (122), Expect = 1e-07
Identities = 14/105 (13%), Positives = 27/105 (25%), Gaps = 4/105 (3%)
Query: 81 SLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG----TIPHELGNCVYLNTLYL 136
+Q L++ L +L + L + L+ I L L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181
N L + ++ + L + +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 107
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (110), Expect = 3e-06
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 76 LQSCKSLQVLNLSTNNLFGKIPTQLCKWF---PYLVSLDLSNNDLSGTIPHELG-----N 127
Q L+VL L+ ++ + L L LDLSNN L +L
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 128 CVYLNTLYLSYNRLSGPLPPQLSSLVRLK 156
L L L S + +L +L + K
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 7e-05
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 49 SCWNGLENRILSLELEEMNLSGQ----VPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWF 104
+ + L L + ++S + +L + SL+ L+LS N L QL +
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 105 P----YLVSLDLSNNDLSGTIPHEL 125
L L L + S + L
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRL 446
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.2 bits (121), Expect = 1e-07
Identities = 28/215 (13%), Positives = 63/215 (29%), Gaps = 54/215 (25%)
Query: 294 GTTYKAM-LLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLEKPL----------- 341
T + A +++ + +A+K + K+ + E+K + + + K
Sbjct: 27 STVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 342 --------------VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCH 387
+ + L +L+ + + +I GL ++
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM--HRR 144
Query: 388 PPCLHQNISSSVILVDED------FDARIMDFGFSR--------------------LTNG 421
+H +I +L++ +I D G + L
Sbjct: 145 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGA 204
Query: 422 DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYK 456
D+ ++ EL+TG FE + K
Sbjct: 205 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 239
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.3 bits (116), Expect = 5e-07
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Query: 78 SCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLS 137
C L+V+ S L K+P L P LDL NN ++ + N L+TL L
Sbjct: 9 QC-HLRVVQCSDLGL-EKVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILI 63
Query: 138 YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGANLGSKCC 197
N++S P + LV+L++ ++ N L +P ++ + ++ +
Sbjct: 64 NNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKTLQELRVHENEITKVRKSVFNG 122
Query: 198 DLSKKKL 204
+
Sbjct: 123 LNQMIVV 129
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.9 bits (115), Expect = 6e-07
Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 4/150 (2%)
Query: 25 PQGKLSSWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQV 84
P+ + I + + ++ L + SG + Q K L
Sbjct: 95 PEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSY 154
Query: 85 LNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGP 144
+ ++ N+ IP L P L L L N ++ L L L LS+N +S
Sbjct: 155 IRIADTNI-TTIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 210
Query: 145 LPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
L++ L++ + N L +
Sbjct: 211 DNGSLANTPHLRELHLNNNKLVKVPGGLAD 240
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.2 bits (108), Expect = 5e-06
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 3/131 (2%)
Query: 71 QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVY 130
+VP+ L +L+L N + L +L L NN +S P V
Sbjct: 24 KVPKDLPP--DTALLDLQNNKITEIKDGDFKN-LKNLHTLILINNKISKISPGAFAPLVK 80
Query: 131 LNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDMLADSRLGGA 190
L LYLS N+L +L L+ + + + N + +++ +
Sbjct: 81 LERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 140
Query: 191 NLGSKCCDLSK 201
+ K
Sbjct: 141 IENGAFQGMKK 151
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 8/141 (5%)
Query: 32 WSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNN 91
+ S I N + GL + L L+ ++ SL+ +L L LS N+
Sbjct: 147 QGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 92 LFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSG------PL 145
+ P+L L L+NN L +P L + Y+ +YL N +S
Sbjct: 207 ISAVDNG-SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 264
Query: 146 PPQLSSLVRLKQFSVAYNCLS 166
P + S+ N +
Sbjct: 265 PGYNTKKASYSGVSLFSNPVQ 285
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 44.3 bits (104), Expect = 3e-06
Identities = 26/116 (22%), Positives = 38/116 (32%), Gaps = 25/116 (21%)
Query: 61 LELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPT--------------------QL 100
L L +L+ V L+ + L+LS N L P
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 101 CKWFPYLVSLDLSNNDLSGT-IPHELGNCVYLNTLYLSYNRLSG--PLPPQLSSLV 153
P L L L NN L + L +C L L L N L + +L+ ++
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.4 bits (99), Expect = 2e-05
Identities = 25/108 (23%), Positives = 35/108 (32%), Gaps = 27/108 (25%)
Query: 83 QVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNT--------- 133
+VL+L+ +L + L + + LDLS+N L P L L
Sbjct: 1 RVLHLAHKDL--TVLCHLEQ-LLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALE 56
Query: 134 -------------LYLSYNRL-SGPLPPQLSSLVRLKQFSVAYNCLSG 167
L L NRL L S RL ++ N L
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 3e-06
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Query: 61 LELEEMNLSG-QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
+ ++L G + L + VLN ++ + + P L+SL+LSNN L
Sbjct: 22 GSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMA--ATLRIIEENIPELLSLNLSNNRLYR 79
Query: 120 T--IPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFN 174
+ + L L LS N L ++L++ + N LS
Sbjct: 80 LDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 1/116 (0%)
Query: 66 MNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHEL 125
L P + L L+L ++ L + L L L +N L
Sbjct: 91 AQLRSVDPATFHGLGRLHTLHLD-RCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 149
Query: 126 GNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181
+ L L+L NR+S L L + + N ++ P F ++
Sbjct: 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (96), Expect = 1e-04
Identities = 25/130 (19%), Positives = 39/130 (30%)
Query: 53 GLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDL 112
G+ + L +S S ++C++L +L L +N L
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88
Query: 113 SNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF 172
N L P L+TL+L L P L L+ + N L
Sbjct: 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT 148
Query: 173 FNGAMKMDML 182
F + L
Sbjct: 149 FRDLGNLTHL 158
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 6e-04
Identities = 22/127 (17%), Positives = 34/127 (26%), Gaps = 4/127 (3%)
Query: 41 FICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
R + V L L N V + N +PT+
Sbjct: 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
L L L++N +L S + + LP +L+ +
Sbjct: 221 LAPLRALQYLRLNDNPWVCDC-RARPLWAWLQKFRGSSSEVPCSLPQRLAG---RDLKRL 276
Query: 161 AYNCLSG 167
A N L G
Sbjct: 277 AANDLQG 283
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/149 (15%), Positives = 45/149 (30%), Gaps = 3/149 (2%)
Query: 43 CRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK 102
+ L +++ + + E + +Q ++LS + + +
Sbjct: 10 KNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVSTLHGILS 68
Query: 103 WFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL--YLSYNRLSGPLPPQLSSLVRLKQFSV 160
L +L L LS I + L L L L LSS RL + ++
Sbjct: 69 QCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNL 128
Query: 161 AYNCLSGRIPSFFNGAMKMDMLADSRLGG 189
++ A + + L G
Sbjct: 129 SWCFDFTEKHVQVAVAHVSETITQLNLSG 157
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 5e-04
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 83 QVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLS 142
Q L+L+ NL + +L +++ + + + E + + + LS + +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQ--GVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIE 59
Query: 143 G-PLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173
L LS +L+ S+ LS I +
Sbjct: 60 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL 91
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160
+ ++ +L+ +P +L L+LS N L L RL Q ++
Sbjct: 6 VSKVASHLEVNCDKRNLT-ALPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNL 62
Query: 161 AYNC 164
Sbjct: 63 DRAE 66
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/66 (22%), Positives = 18/66 (27%), Gaps = 4/66 (6%)
Query: 75 SLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134
+ S +N NL +P L L LS N L L L L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 135 YLSYNR 140
L
Sbjct: 61 NLDRAE 66
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.002
Identities = 20/101 (19%), Positives = 28/101 (27%), Gaps = 1/101 (0%)
Query: 41 FICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQL 100
R + L + N +P L + NN ++P L
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGL 167
Query: 101 CKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRL 141
L +L L N L TIP L +L N
Sbjct: 168 LNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.5 bits (90), Expect = 8e-04
Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 12/141 (8%)
Query: 31 SWSLTNSSVGFICRFNGVSCWNGLENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTN 90
+ G++ L+ L S + +L+S +L+ L L+
Sbjct: 194 VQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDC 253
Query: 91 NLFGKIPTQLCKWF-----PYLVSLDLSNNDLSGTIPHEL-----GNCVYLNTLYLSYNR 140
L + + F L +L L N++ L L L L+ NR
Sbjct: 254 LLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 313
Query: 141 LS--GPLPPQLSSLVRLKQFS 159
S + ++ + +
Sbjct: 314 FSEEDDVVDEIREVFSTRGRG 334
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (83), Expect = 0.003
Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 2/106 (1%)
Query: 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSG 119
L L ++L L + + + + L +L + + L
Sbjct: 12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF 70
Query: 120 TIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165
P L+ L LS+N L L + + L++ ++ N L
Sbjct: 71 VAPDAFHFTPRLSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPL 115
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 538 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.91 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.89 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.68 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.62 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.59 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.53 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.42 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.42 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.42 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.41 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.33 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.29 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.27 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.21 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.19 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.18 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.15 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.12 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.09 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.08 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.05 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.98 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.94 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.92 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.9 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.9 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.71 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.69 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.65 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.39 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.31 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.28 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.18 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.18 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.0 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.99 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.87 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.8 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.77 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.5 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.3 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.06 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.95 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.84 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.59 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.51 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.93 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 94.39 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-46 Score=365.28 Aligned_cols=222 Identities=24% Similarity=0.384 Sum_probs=175.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|+..+.||+|+||.||+|.+.+++.||||+++......++|.+|++++++++|||| ..++||||+++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~ 84 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 84 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCC
Confidence 3577788999999999999999888899999998877778899999999999999999 34699999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC-------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG------- 421 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------- 421 (538)
|+|.+++.... ..++|..+.+|+.|||.||+|||+ .+|+||||||+|||+|+++.+||+|||+++....
T Consensus 85 g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~ 160 (263)
T d1sm2a_ 85 GCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160 (263)
T ss_dssp CBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred CcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence 99999987654 368999999999999999999999 9999999999999999999999999999985432
Q ss_pred -----------------CCCCccCcccHHHHHHHHHhC-CCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 422 -----------------DASLQKDVHGFGVVLLELVTG-QKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 422 -----------------~~~~~~DV~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
.++.++|||||||++|||+|+ ++||..... ..+...+. .+.. ... +.
T Consensus 161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~-----~~~~~~i~----~~~~--~~~----p~ 225 (263)
T d1sm2a_ 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDIS----TGFR--LYK----PR 225 (263)
T ss_dssp ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH-----HHHHHHHH----HTCC--CCC----CT
T ss_pred ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH-----HHHHHHHH----hcCC--CCC----cc
Confidence 178899999999999999995 555543211 11222111 1110 011 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
..++++ .+++.+||+.||++||||+||++.|++|.++
T Consensus 226 ~~~~~l---~~li~~cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 226 LASTHV---YQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp TSCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCHHH---HHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence 223344 4455599999999999999999999999875
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.1e-47 Score=373.50 Aligned_cols=228 Identities=20% Similarity=0.322 Sum_probs=184.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC-CCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL-DGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||+||+|... +++.||||+++.+....++|.+|++++++++|||| ..++|||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~ 95 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 95 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence 456777889999999999999964 58899999998777777889999999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++.......+++..+.+|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~ 172 (287)
T d1opja_ 96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172 (287)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence 99999999987666689999999999999999999999 99999999999999999999999999999876432
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++|||||||++|||++|..|+...... ..+. .....+.. +.. .
T Consensus 173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~----~~~~----~~i~~~~~-----~~~-~ 238 (287)
T d1opja_ 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVY----ELLEKDYR-----MER-P 238 (287)
T ss_dssp ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHH----HHHHTTCC-----CCC-C
T ss_pred eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH----HHHH----HHHhcCCC-----CCC-C
Confidence 788999999999999999977776532211 1111 11111110 111 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCC
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGF 526 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 526 (538)
...++++. +++.+||+.||++||||+||++.|+.+.++...
T Consensus 239 ~~~~~~l~---~li~~cl~~dP~~Rps~~ei~~~L~~~~~~~~~ 279 (287)
T d1opja_ 239 EGCPEKVY---ELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 279 (287)
T ss_dssp TTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHTTSSSCH
T ss_pred ccchHHHH---HHHHHHcCCCHhHCcCHHHHHHHHHHHHHhCCC
Confidence 12233444 455599999999999999999999988665443
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=365.96 Aligned_cols=223 Identities=21% Similarity=0.353 Sum_probs=179.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
++|...+.||+|+||.||+|.+.+++.||||+++......++|.+|++++++++|||| ..++||||+++|
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g 92 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENG 92 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCC
Confidence 4677778999999999999999888899999998777777889999999999999999 346999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------- 422 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------- 422 (538)
+|.+++.......++|.++++|+.||++||+|||+ .+|+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 ~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~ 169 (272)
T d1qpca_ 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (272)
T ss_dssp BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCccccccc
Confidence 99998876544469999999999999999999999 99999999999999999999999999999865421
Q ss_pred -----------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 423 -----------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 423 -----------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
++.++|||||||++|||+||..|+...... ..+...+ ..+. .+. .+...
T Consensus 170 ~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~----~~~~~~i----~~~~-----~~~-~p~~~ 235 (272)
T d1qpca_ 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEVIQNL----ERGY-----RMV-RPDNC 235 (272)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHH----HTTC-----CCC-CCTTC
T ss_pred cCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH----HHHHHHH----HhcC-----CCC-CcccC
Confidence 778999999999999999966655432211 1111111 1111 011 11223
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
++++. +++.+||+.||++||||+||++.|+++..
T Consensus 236 ~~~l~---~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 236 PEELY---QLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp CHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hHHHH---HHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 33444 45559999999999999999999998754
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-45 Score=359.10 Aligned_cols=227 Identities=24% Similarity=0.373 Sum_probs=177.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------cccEEEee
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------EKPLVYKY 345 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~ 345 (538)
.++|...+.||+|+||+||+|+..+ .||||+++... ...+.|.+|++++++++|||| ..++||||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey 84 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW 84 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEec
Confidence 4578889999999999999998643 59999997432 334679999999999999999 34699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
|++|+|.+++.... ..+++.++.+|+.|||+||+|||+ ++||||||||+|||++.++.+||+|||+|+....
T Consensus 85 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~ 160 (276)
T d1uwha_ 85 CEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160 (276)
T ss_dssp CCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred CCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence 99999999997654 369999999999999999999999 9999999999999999999999999999975421
Q ss_pred ------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 422 ------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 422 ------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
.++.++|||||||++|||+||+.||....... .+......+.......
T Consensus 161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~--------~~~~~~~~~~~~p~~~ 232 (276)
T d1uwha_ 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--------QIIFMVGRGYLSPDLS 232 (276)
T ss_dssp -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--------HHHHHHHHTSCCCCGG
T ss_pred ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH--------HHHHHHhcCCCCCcch
Confidence 15778999999999999999999998533211 1111111111111000
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
.. ....++++.+ ++.+||+.||++||||+||++.|+.+.++.
T Consensus 233 -~~-~~~~~~~l~~---li~~cl~~dp~~RPt~~~il~~Le~l~~~~ 274 (276)
T d1uwha_ 233 -KV-RSNCPKAMKR---LMAECLKKKRDERPLFPQILASIELLARSL 274 (276)
T ss_dssp -GS-CTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred -hc-cccchHHHHH---HHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence 11 1122334444 455999999999999999999999998754
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.9e-46 Score=367.03 Aligned_cols=221 Identities=22% Similarity=0.375 Sum_probs=168.6
Q ss_pred CCCCCCeEeecCCceEEEEEeC-CC---CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLL-DG---SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
+|+..++||+|+||+||+|... ++ ..||||.+.... ...++|.+|+++|++++|||| ..++||
T Consensus 27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~ 106 (299)
T d1jpaa_ 27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT 106 (299)
T ss_dssp GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence 3445679999999999999964 33 268999986533 334679999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
|||++|+|.+++.... ..++|.++.+|+.|||+||+|||+ ++|+||||||+|||++.++++||+|||+++....
T Consensus 107 Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 182 (299)
T d1jpaa_ 107 EFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 182 (299)
T ss_dssp ECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceEccCCC
Confidence 9999999999988654 369999999999999999999999 9999999999999999999999999999985431
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
.++.++|||||||++|||+| |+.||...... .+...+ .......
T Consensus 183 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~-----~~~~~i---~~~~~~~- 253 (299)
T d1jpaa_ 183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-----DVINAI---EQDYRLP- 253 (299)
T ss_dssp -------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHH---HTTCCCC-
T ss_pred CcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH-----HHHHHH---HcCCCCC-
Confidence 17889999999999999998 89999753321 122222 1111110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.....++++ .+++.+||+.||++||||.||++.|+++.+.
T Consensus 254 ------~~~~~~~~l---~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 254 ------PPMDCPSAL---HQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp ------CCTTCCHHH---HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ------CCccchHHH---HHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 011223344 4455599999999999999999999998753
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-45 Score=353.56 Aligned_cols=219 Identities=20% Similarity=0.304 Sum_probs=180.3
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeecCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYMSN 348 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~~~ 348 (538)
++|+..+.||+|+||+||+|+.++++.||||.++......++|.+|++++++++|||| ..++||||+++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~ 83 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 83 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCC
Confidence 5788999999999999999999888899999998877778899999999999999999 33589999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC------
Q 040267 349 GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------ 422 (538)
Q Consensus 349 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------ 422 (538)
|+|.+++.... ..+++..+.+++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 84 g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 159 (258)
T d1k2pa_ 84 GCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159 (258)
T ss_dssp EEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred CcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence 99999977654 268999999999999999999999 99999999999999999999999999999754321
Q ss_pred ------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 ------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 ------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
++.++|||||||++|||+| |+.||......+ + . ..+..+.. ... +.
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~-----~---~-~~i~~~~~--~~~----p~ 224 (258)
T d1k2pa_ 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----T---A-EHIAQGLR--LYR----PH 224 (258)
T ss_dssp CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-----H---H-HHHHTTCC--CCC----CT
T ss_pred ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH-----H---H-HHHHhCCC--CCC----cc
Confidence 7889999999999999998 899998643321 1 1 11222111 011 12
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
..++++.++++ +||+.||++|||++||++.|.+|
T Consensus 225 ~~~~~l~~li~---~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 225 LASEKVYTIMY---SCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp TCCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHHCC
T ss_pred cccHHHHHHHH---HHccCCHhHCcCHHHHHHHhhCC
Confidence 22344555555 99999999999999999998754
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-45 Score=357.77 Aligned_cols=225 Identities=21% Similarity=0.352 Sum_probs=180.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc----------ccEEEeecCCC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE----------KPLVYKYMSNG 349 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~----------~~lv~e~~~~g 349 (538)
++|+..+.||+|+||.||+|+..+++.||||+++......+.|.+|+.++++++||||+ .++||||+++|
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g 96 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG 96 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTC
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCCC
Confidence 46888899999999999999998888999999987777778899999999999999993 45999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------- 422 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------- 422 (538)
+|.+++.......++|.++++|+.||+.||+|||+ .+|+||||||+|||+|+++++||+|||+++.....
T Consensus 97 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 173 (285)
T d1fmka3 97 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 173 (285)
T ss_dssp BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred chhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCceeecc
Confidence 99999876544469999999999999999999999 99999999999999999999999999999854321
Q ss_pred -----------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCc
Q 040267 423 -----------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGY 485 (538)
Q Consensus 423 -----------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 485 (538)
++.++|||||||++|||+||..|+...... ..+..++. .+.. ... ....
T Consensus 174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~----~~~~~~i~----~~~~-----~~~-~~~~ 239 (285)
T d1fmka3 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVE----RGYR-----MPC-PPEC 239 (285)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHH----TTCC-----CCC-CTTS
T ss_pred ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH----HHHHHHHH----hcCC-----CCC-Cccc
Confidence 788999999999999999977666542221 11222221 1110 111 1122
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhc
Q 040267 486 DDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQL 524 (538)
Q Consensus 486 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~ 524 (538)
++++. +++.+||+.||++||||++|++.|++.....
T Consensus 240 ~~~l~---~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 240 PESLH---DLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp CHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CHHHH---HHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 34444 4555999999999999999999998866544
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-45 Score=355.85 Aligned_cols=225 Identities=18% Similarity=0.270 Sum_probs=176.8
Q ss_pred CCCCCC-eEeecCCceEEEEEeC---CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEEEe
Q 040267 281 NFSAQN-VLVSTWTGTTYKAMLL---DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~-~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e 344 (538)
+|...+ +||+|+||.||+|... ++..||||.++... ...++|.+|++++++++|||| ..|+|||
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE 88 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME 88 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEE
Confidence 444455 4999999999999853 35589999997533 334679999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+++|+|.+++.... ..+++.++.+++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~ 164 (285)
T d1u59a_ 89 MAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 164 (285)
T ss_dssp CCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred eCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccccccc
Confidence 999999999986543 369999999999999999999999 99999999999999999999999999999854321
Q ss_pred ------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCcccccc
Q 040267 423 ------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVID 477 (538)
Q Consensus 423 ------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 477 (538)
++.++|||||||++|||+| |+.||...... .+.. .+..+...+
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~-----~~~~----~i~~~~~~~--- 232 (285)
T d1u59a_ 165 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMA----FIEQGKRME--- 232 (285)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHH----HHHTTCCCC---
T ss_pred ccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH-----HHHH----HHHcCCCCC---
Confidence 6789999999999999998 99999854321 1211 122221111
Q ss_pred ccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 478 KALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 478 ~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
. +...++++. +|+.+||+.||++||||.+|++.|+.+..+....
T Consensus 233 --~-p~~~~~~l~---~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~ 276 (285)
T d1u59a_ 233 --C-PPECPPELY---ALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 276 (285)
T ss_dssp --C-CTTCCHHHH---HHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred --C-CCcCCHHHH---HHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhc
Confidence 1 112234444 4555999999999999999999999887665443
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-44 Score=350.96 Aligned_cols=213 Identities=22% Similarity=0.281 Sum_probs=169.4
Q ss_pred CeEeecCCceEEEEEeCC---CCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC----------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLD---GSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL----------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni----------~~~lv~e~~~~g 349 (538)
+.||+|+||.||+|.+.+ ++.||||+++... ...++|.+|++++++++|||| ..++||||+++|
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g 92 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 92 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence 579999999999998533 4689999996432 224679999999999999999 336999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-------
Q 040267 350 TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD------- 422 (538)
Q Consensus 350 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------- 422 (538)
+|.++++... .+++.++++|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 167 (277)
T d1xbba_ 93 PLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167 (277)
T ss_dssp EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred cHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence 9999998765 69999999999999999999999 99999999999999999999999999999854321
Q ss_pred -------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++|||||||++|||+| |+.||...... .+. ..+..+.... . +
T Consensus 168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~-----~~~----~~i~~~~~~~-----~-p 232 (277)
T d1xbba_ 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVT----AMLEKGERMG-----C-P 232 (277)
T ss_dssp ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHH----HHHHTTCCCC-----C-C
T ss_pred cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH-----HHH----HHHHcCCCCC-----C-C
Confidence 6789999999999999998 89999853321 111 1122221111 1 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIA 521 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~ 521 (538)
...++++. +|+.+||+.||++||||++|.+.|+...
T Consensus 233 ~~~~~~~~---~li~~cl~~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 233 AGCPREMY---DLMNLCWTYDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp TTCCHHHH---HHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred cccCHHHH---HHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence 12234444 4555999999999999999999888754
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-44 Score=348.78 Aligned_cols=223 Identities=23% Similarity=0.302 Sum_probs=170.5
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-C----CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-G----SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-~----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~l 341 (538)
+.|+..++||+|+||.||+|.+.+ + ..||||+++... ....+|.+|++++++++|||| ..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 357778899999999999999643 2 379999996533 234578999999999999999 3358
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+.+|++.+++.... ..++|.++++++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 87 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 162 (283)
T d1mqba_ 87 ITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 162 (283)
T ss_dssp EEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcccC
Confidence 999999999999887654 369999999999999999999999 9999999999999999999999999999985422
Q ss_pred --------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 422 --------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 422 --------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
.++.++|||||||++|||+||..|+...... ..+...+ ..+.
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~----~~~~~~i----~~~~---- 230 (283)
T d1mqba_ 163 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAI----NDGF---- 230 (283)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHH----HTTC----
T ss_pred CCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH----HHHHHHH----hccC----
Confidence 1788999999999999999976665532211 1121111 1111
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
+.+.+......+.+|+.+||+.||++||||.||++.|+++.+.
T Consensus 231 -----~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 231 -----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp -----CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 1111111223345555699999999999999999999998764
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-44 Score=347.49 Aligned_cols=221 Identities=22% Similarity=0.362 Sum_probs=174.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEeecC
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYMS 347 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~~ 347 (538)
++|+..+.||+|+||.||+|.. .|+.||||+++... ..++|.+|++++++++|||| ..++||||++
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~ 84 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 84 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccC
Confidence 3566778999999999999998 57899999997643 45789999999999999999 2469999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-----
Q 040267 348 NGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD----- 422 (538)
Q Consensus 348 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----- 422 (538)
+|+|.+++.......++|..+++|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 85 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 9999999976543458999999999999999999999 99999999999999999999999999999864432
Q ss_pred ---------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCCCcH
Q 040267 423 ---------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYD 486 (538)
Q Consensus 423 ---------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 486 (538)
++.++|||||||++|||+| |+.||..... ..+..++. .+.. +... ...+
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~-----~~~~~~i~----~~~~-----~~~~-~~~~ 226 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVE----KGYK-----MDAP-DGCP 226 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHT----TTCC-----CCCC-TTCC
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHH----cCCC-----CCCC-ccCC
Confidence 8899999999999999998 7888775332 23333332 1111 1111 1223
Q ss_pred HHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 487 DEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 487 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.++.+++ .+||+.||++||||.||+++|++++..
T Consensus 227 ~~~~~li---~~cl~~dP~~Rps~~~l~~~L~~i~~~ 260 (262)
T d1byga_ 227 PAVYEVM---KNCWHLDAAMRPSFLQLREQLEHIKTH 260 (262)
T ss_dssp HHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence 4555554 599999999999999999999998753
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=341.97 Aligned_cols=212 Identities=22% Similarity=0.299 Sum_probs=173.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||+||+|+. .+++.||+|++.+. ....+.+.+|++++++++|||| ..++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 4688889999999999999996 46899999998642 2345778999999999999999 345999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|||++|+|.+++...+ .+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 86 Ey~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~ 160 (263)
T d2j4za1 86 EYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 160 (263)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC
T ss_pred eecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCCc
Confidence 9999999999998765 59999999999999999999999 99999999999999999999999999999865432
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++|||||||++|||+||+.||...... ...... ..... .+ +
T Consensus 161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i-~~~~~------~~-p 224 (263)
T d2j4za1 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRI-SRVEF------TF-P 224 (263)
T ss_dssp CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHH-HTTCC------CC-C
T ss_pred ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH--------HHHHHH-HcCCC------CC-C
Confidence 789999999999999999999999754321 111111 11111 11 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+..++++.+++. +||+.||++|||++|+++
T Consensus 225 ~~~s~~~~~li~---~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 225 DFVTEGARDLIS---RLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHH---HHccCCHhHCcCHHHHHc
Confidence 223445565555 999999999999999986
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-44 Score=349.42 Aligned_cols=215 Identities=19% Similarity=0.265 Sum_probs=168.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|++++++++|||| ..|+||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 4688889999999999999995 569999999986533 234568999999999999999 34599999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC----
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG---- 421 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---- 421 (538)
+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+|+....
T Consensus 85 ~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~ 159 (271)
T d1nvra_ 85 CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159 (271)
T ss_dssp CTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence 99999999997655 69999999999999999999999 9999999999999999999999999999985321
Q ss_pred ---------------------C-CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ---------------------D-ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ---------------------~-~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
. ++.++||||+||++|||+||+.||........ ... ......... .+
T Consensus 160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~---~~~----~~~~~~~~~---~~- 228 (271)
T d1nvra_ 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYS----DWKEKKTYL---NP- 228 (271)
T ss_dssp CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH---HHH----HHHTTCTTS---TT-
T ss_pred ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH---HHH----HHhcCCCCC---Cc-
Confidence 0 45789999999999999999999975432110 011 111111000 00
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....++++.++++ +||+.||++|||++|+++
T Consensus 229 --~~~~s~~~~~li~---~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 229 --WKKIDSAPLALLH---KILVENPSARITIPDIKK 259 (271)
T ss_dssp --GGGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred --cccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 0112345555555 999999999999999864
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-43 Score=343.96 Aligned_cols=214 Identities=19% Similarity=0.351 Sum_probs=172.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|++++++++|||| ..|+|||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 4699999999999999999994 579999999997543 345779999999999999999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++... .+++.++..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 100 ~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 173 (293)
T d1yhwa1 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (293)
T ss_dssp TTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeeccccccc
Confidence 999999998765 49999999999999999999999 99999999999999999999999999999865321
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
++.++|||||||++|||+||+.||...... ..+......+.. ..-. ..
T Consensus 174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~~~~~~~~~~~-~~~~----~~ 240 (293)
T d1yhwa1 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGTP-ELQN----PE 240 (293)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHHCSC-CCSS----GG
T ss_pred cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH--------HHHHHHHhCCCC-CCCC----cc
Confidence 788999999999999999999999753321 111111111111 0000 01
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..++++.++++ +||+.||++|||+.|+++
T Consensus 241 ~~s~~~~~li~---~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 241 KLSAIFRDFLN---RCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp GSCHHHHHHHH---HHTCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 12345555555 999999999999999875
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.1e-44 Score=354.08 Aligned_cols=229 Identities=23% Similarity=0.328 Sum_probs=180.0
Q ss_pred HHHHHHhcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-------
Q 040267 273 VHLIAATSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------- 337 (538)
Q Consensus 273 ~~l~~~~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------- 337 (538)
.+++...++|+..+.||+|+||+||+|+.. +++.||||+++... ...++|.+|++++++++||||
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~ 85 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 85 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence 344456678999999999999999999853 35789999997543 234679999999999999999
Q ss_pred ----cccEEEeecCCCCHHHHhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 040267 338 ----EKPLVYKYMSNGTLYSLLHSNG----------------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCL 391 (538)
Q Consensus 338 ----~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iv 391 (538)
..++||||+++|+|.++++... ...+++..++.|+.|++.||+|||+ .+||
T Consensus 86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~iv 162 (301)
T d1lufa_ 86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFV 162 (301)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCC
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeE
Confidence 3469999999999999997532 1358999999999999999999999 9999
Q ss_pred ccCCCCCCeeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHhCC-CC
Q 040267 392 HQNISSSVILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQ-KP 445 (538)
Q Consensus 392 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~-~p 445 (538)
||||||+|||+|.++.+||+|||+|+.... .++.++|||||||++|||++|. .|
T Consensus 163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p 242 (301)
T d1lufa_ 163 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242 (301)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred eeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence 999999999999999999999999874321 1789999999999999999986 56
Q ss_pred CCCCcccccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 446 FEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
|...... .+... +..+..... ....+.+ +.+|+.+||+.||++||||.||++.|++|.+
T Consensus 243 ~~~~~~~-----e~~~~----v~~~~~~~~------p~~~~~~---~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 243 YYGMAHE-----EVIYY----VRDGNILAC------PENCPLE---LYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp TTTSCHH-----HHHHH----HHTTCCCCC------CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCCCCHH-----HHHHH----HHcCCCCCC------CccchHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 7653221 12221 222222111 1112233 4556669999999999999999999999864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-43 Score=344.75 Aligned_cols=218 Identities=21% Similarity=0.325 Sum_probs=166.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-------------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE-------------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~-------------~~lv 342 (538)
++|+..+.||+|+||+||+|+. .+|+.||||.++.... ..+.+.+|++++++++||||+ .|+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 5788899999999999999995 5699999999975432 235688999999999999992 3689
Q ss_pred EeecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 343 YKYMSNGTLYSLLHSNG--NTALDWPSRLRIGLGAARGLSWLHHCC--HPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
||||++|+|.+++.... ...+++..++.++.|++.||+|||+.. ..+|+||||||+|||++.++.+||+|||+|+.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 99999999999987532 346999999999999999999999821 13499999999999999999999999999975
Q ss_pred cCC-----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccc
Q 040267 419 TNG-----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDV 475 (538)
Q Consensus 419 ~~~-----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
... .++.++|||||||++|||+||+.||...... .+. ..+..+....
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~-----~~~----~~i~~~~~~~- 233 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELA----GKIREGKFRR- 233 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHH----HHHHHTCCCC-
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH-----HHH----HHHHcCCCCC-
Confidence 432 1789999999999999999999999753321 111 1112222211
Q ss_pred ccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 476 IDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 476 ~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+ ....++++.++++ +||+.||++|||+.|+++
T Consensus 234 ----~-~~~~s~~l~~li~---~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 234 ----I-PYRYSDELNEIIT---RMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp ----C-CTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred ----C-CcccCHHHHHHHH---HHcCCChhHCcCHHHHHh
Confidence 1 1123445555555 999999999999999875
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-43 Score=351.94 Aligned_cols=219 Identities=23% Similarity=0.346 Sum_probs=170.2
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC-C-----CEEEEEEcccc--cccHHHHHHHHHHHhcC-CCCCC-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD-G-----SMLAIKRLSAC--KLGEKQFLLEMKQVGLL-KHPNL-----------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~-~-----~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~H~ni-----------~~ 339 (538)
++|...+.||+|+||+||+|+... + ..||+|.+... ......+.+|+.++.++ +|||| ..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 568888999999999999998532 2 36999998643 23346789999999998 89999 34
Q ss_pred cEEEeecCCCCHHHHhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCC
Q 040267 340 PLVYKYMSNGTLYSLLHSNGN---------------------TALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSS 398 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~ 398 (538)
++|||||++|+|.++++.... ..+++..++.|+.||+.||+|||+ ++|+||||||+
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlKp~ 193 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAAR 193 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGG
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCchh
Confidence 699999999999999976431 358999999999999999999999 99999999999
Q ss_pred CeeeCCCCCeEEEeccCCcccCC-------------------------CCCCccCcccHHHHHHHHHh-CCCCCCCCccc
Q 040267 399 VILVDEDFDARIMDFGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVT-GQKPFEINASE 452 (538)
Q Consensus 399 NIll~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~ 452 (538)
|||++.++.+||+|||+|+.... .++.++|||||||++|||+| |+.||.+....
T Consensus 194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~ 273 (325)
T d1rjba_ 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 273 (325)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999975322 17889999999999999998 89999764332
Q ss_pred ccccccHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 040267 453 EGYKGNLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLC 518 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 518 (538)
+ .+.. ....+.. .. .+...++++.++ +.+||+.||++||||+||++.|.
T Consensus 274 ~----~~~~----~~~~~~~-----~~-~p~~~~~~l~~l---i~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 274 A----NFYK----LIQNGFK-----MD-QPFYATEEIYII---MQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp H----HHHH----HHHTTCC-----CC-CCTTCCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H----HHHH----HHhcCCC-----CC-CCCcCCHHHHHH---HHHHcCCChhHCcCHHHHHHHHh
Confidence 1 1111 1111110 00 111233445544 45999999999999999999985
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-43 Score=344.13 Aligned_cols=239 Identities=18% Similarity=0.239 Sum_probs=179.1
Q ss_pred CCCCCCeEeecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc---------------ccEEEee
Q 040267 281 NFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE---------------KPLVYKY 345 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~e~ 345 (538)
+|...+.||+|+||.||+|++ +|+.||||+++........+..|+..+..++||||+ .++||||
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey 82 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence 455667899999999999997 688999999975443233344566666788999992 3699999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC-----HPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
|++|+|.++++... ++|.++++++.|+|.||+|||+.. .++|+||||||+|||++.++.+||+|||+++...
T Consensus 83 ~~~g~L~~~l~~~~---l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~ 159 (303)
T d1vjya_ 83 HEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred ccCCCHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccccc
Confidence 99999999998754 999999999999999999999731 3699999999999999999999999999987542
Q ss_pred CC---------------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccc------cHHH
Q 040267 421 GD---------------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG------NLVN 461 (538)
Q Consensus 421 ~~---------------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~------~~~~ 461 (538)
.. ++.++|||||||++|||+||..|+........... ....
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T d1vjya_ 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHH
Confidence 11 34578999999999999999988764332221110 1112
Q ss_pred HHHHHhccCCccccccccccCCC-cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 462 WIDQLSSSGRIKDVIDKALTGKG-YDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 462 ~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
........+.. ++.+.... ..+....+.+++.+||+.||++||||.||++.|+++.++-+..
T Consensus 240 ~~~~~~~~~~~----~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~~~ 302 (303)
T d1vjya_ 240 EMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302 (303)
T ss_dssp HHHHHHTTSCC----CCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhcccc----CCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcCCC
Confidence 22222222221 11111111 2234556777888999999999999999999999999876653
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-43 Score=343.26 Aligned_cols=216 Identities=17% Similarity=0.285 Sum_probs=171.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCCc-----------ccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNLE-----------KPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~e~~ 346 (538)
+.|+..+.||+|+||.||+|+. .+++.||||+++... ...+++.+|++++++++||||+ .++|||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 3577788999999999999995 568999999996533 3446799999999999999993 35999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC------
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN------ 420 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------ 420 (538)
++|+|.+++.... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+...
T Consensus 92 ~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~ 167 (288)
T d2jfla1 92 AGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 167 (288)
T ss_dssp TTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHH
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCcccc
Confidence 9999999986543 259999999999999999999999 999999999999999999999999999986321
Q ss_pred ----------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 421 ----------------------GDASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 421 ----------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
..++.++|||||||++|||+||+.||......+ +. ..... +.......
T Consensus 168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~-----~~---~~i~~-~~~~~~~~- 237 (288)
T d2jfla1 168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR-----VL---LKIAK-SEPPTLAQ- 237 (288)
T ss_dssp TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-----HH---HHHHH-SCCCCCSS-
T ss_pred cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH-----HH---HHHHc-CCCCCCCc-
Confidence 116789999999999999999999998644322 11 11111 11111100
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
....++++.++++ +||+.||++|||++|+++
T Consensus 238 ---~~~~s~~~~~li~---~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 238 ---PSRWSSNFKDFLK---KCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp ---GGGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred ---cccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 1122345555555 999999999999999876
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-42 Score=335.28 Aligned_cols=211 Identities=21% Similarity=0.281 Sum_probs=166.1
Q ss_pred CCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc---------------ccEEEe
Q 040267 284 AQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE---------------KPLVYK 344 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~---------------~~lv~e 344 (538)
..+.||+|+||+||+|.. .+++.||+|.+.... ...+.+.+|++++++++||||+ .++|||
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE 92 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 92 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence 446799999999999995 468899999986533 2345689999999999999993 258999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ccccCCCCCCeeeC-CCCCeEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPP--CLHQNISSSVILVD-EDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~ 421 (538)
|+++|+|.+++.... .+++.++..++.||+.||+|||+ .+ |+||||||+|||++ +++.+||+|||+|+....
T Consensus 93 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 93 LMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 999999999998765 59999999999999999999998 66 99999999999996 578999999999985432
Q ss_pred C--------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccccc
Q 040267 422 D--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALT 481 (538)
Q Consensus 422 ~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 481 (538)
. ++.++|||||||++|||+||+.||...... ...... ...+.....++
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~-------~~~~~~-i~~~~~~~~~~---- 235 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRR-VTSGVKPASFD---- 235 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHH-HTTTCCCGGGG----
T ss_pred CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccH-------HHHHHH-HHcCCCCcccC----
Confidence 1 788999999999999999999999753221 111111 11111111111
Q ss_pred CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 482 GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 482 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++.++++ +||+.||++|||+.|+++
T Consensus 236 -~~~~~~~~~li~---~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 236 -KVAIPEVKEIIE---GCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp -GCCCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred -ccCCHHHHHHHH---HHccCCHhHCcCHHHHhC
Confidence 112334555555 999999999999999975
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-42 Score=341.98 Aligned_cols=222 Identities=23% Similarity=0.354 Sum_probs=173.2
Q ss_pred CCeEeecCCceEEEEEeCCC----CEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC------------cccEEEeec
Q 040267 285 QNVLVSTWTGTTYKAMLLDG----SMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYM 346 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~~~~----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~ 346 (538)
.++||+|+||+||+|++.++ ..||||+++... ...++|.+|++++++++|||| ..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 36899999999999996432 268999997432 334679999999999999999 235899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
++|+|.+++.... ..+++..+++++.|++.||.|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 112 ~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~ 187 (311)
T d1r0pa_ 112 KHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 187 (311)
T ss_dssp TTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC
T ss_pred ecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhcccccccc
Confidence 9999999988654 367899999999999999999999 99999999999999999999999999999854321
Q ss_pred -----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
++.++||||||+++|||+||+.||...... ..+..++ . .+... .
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i---~-~g~~~--~--- 254 (311)
T d1r0pa_ 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYL---L-QGRRL--L--- 254 (311)
T ss_dssp TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHH---H-TTCCC--C---
T ss_pred ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHH---H-cCCCC--C---
Confidence 788999999999999999988887643221 1122222 1 11111 0
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCC
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFS 527 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 527 (538)
.+...++++. +++.+||+.||++||||.||++.|+++.+.+...
T Consensus 255 -~p~~~~~~l~---~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~ 298 (311)
T d1r0pa_ 255 -QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 298 (311)
T ss_dssp -CCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred -CcccCcHHHH---HHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence 1122234444 4555999999999999999999999998876554
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-43 Score=340.46 Aligned_cols=222 Identities=21% Similarity=0.356 Sum_probs=171.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC----CCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD----GSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+... +..||||.++... ...+.|.+|++++++++|||| ..++||
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~ 86 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM 86 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEE
Confidence 467778999999999999998643 3579999986533 234679999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++|+|.+++.... ..+++..++.++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 87 E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 87 ELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp ECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence 9999999999887654 368999999999999999999999 99999999999999999999999999999864321
Q ss_pred -----------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
++.++|||||||++|||+| |..||...... .+...+. .+....
T Consensus 163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~-----~~~~~i~----~~~~~~---- 229 (273)
T d1mp8a_ 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIE----NGERLP---- 229 (273)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH----TTCCCC----
T ss_pred ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH-----HHHHHHH----cCCCCC----
Confidence 7889999999999999998 89999864432 2222221 111111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
. ....++++.+++. +||+.||++|||+.||++.|+++.++
T Consensus 230 -~-~~~~~~~~~~li~---~cl~~dp~~Rps~~ei~~~L~~i~~~ 269 (273)
T d1mp8a_ 230 -M-PPNCPPTLYSLMT---KCWAYDPSRRPRFTELKAQLSTILEE 269 (273)
T ss_dssp -C-CTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -C-CCCCCHHHHHHHH---HHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1 1122345555555 99999999999999999999998765
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-43 Score=348.02 Aligned_cols=167 Identities=22% Similarity=0.337 Sum_probs=148.0
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.++|+..+.||+|+||+||+|+. .+|+.||+|+++... ...+++.+|+++|++++|||| ..++|||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE 84 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 84 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 56788999999999999999995 568999999997532 335679999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CccccCCCCCCeeeCCCCCeEEEeccCCcccC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHP-PCLHQNISSSVILVDEDFDARIMDFGFSRLTN--- 420 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--- 420 (538)
|+++|+|.+++.+.+ .+++..+..++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+|+...
T Consensus 85 y~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 159 (322)
T d1s9ja_ 85 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159 (322)
T ss_dssp CCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT
T ss_pred cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH---hCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc
Confidence 999999999998765 59999999999999999999997 5 89999999999999999999999999998431
Q ss_pred ------------------CCCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 421 ------------------GDASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 421 ------------------~~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
..++.++||||+||++|||++|+.||....
T Consensus 160 ~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~ 207 (322)
T d1s9ja_ 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207 (322)
T ss_dssp C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCC
T ss_pred cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 128999999999999999999999997643
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8e-43 Score=345.03 Aligned_cols=213 Identities=20% Similarity=0.263 Sum_probs=171.2
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----cHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----GEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.|+..+.||+|+||+||+|+. .+++.||||+++.... ..+.+.+|++++++++|||| ..|+|||
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E 95 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence 477889999999999999994 5688999999975432 23568899999999999999 3459999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC---
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG--- 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 421 (538)
||++|+|..++.... .+++.++..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+....
T Consensus 96 ~~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~ 170 (309)
T d1u5ra_ 96 YCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 170 (309)
T ss_dssp CCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred ecCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCCCCc
Confidence 999999987776654 69999999999999999999999 9999999999999999999999999999985432
Q ss_pred -------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 422 -------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 422 -------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
.++.++|||||||++|||++|+.||...... ......... .. +.+..
T Consensus 171 ~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~--------~~~~~i~~~-~~-----~~~~~ 236 (309)
T d1u5ra_ 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQN-ES-----PALQS 236 (309)
T ss_dssp CCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS-CC-----CCCSC
T ss_pred cccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhC-CC-----CCCCC
Confidence 1678999999999999999999999753321 111111111 11 11122
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++.++++ +||+.||++|||++|+++
T Consensus 237 ~~~s~~~~~li~---~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 237 GHWSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp TTSCHHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHHHHH---HHCcCChhHCcCHHHHHh
Confidence 233456666666 999999999999999975
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-42 Score=345.70 Aligned_cols=221 Identities=23% Similarity=0.393 Sum_probs=174.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCC----EEEEEEcccc--cccHHHHHHHHHHHhcCCCCCCcc----------cEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGS----MLAIKRLSAC--KLGEKQFLLEMKQVGLLKHPNLEK----------PLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~H~ni~~----------~lv 342 (538)
++|+..++||+|+||+||+|... +|+ .||+|+++.. ....++|.+|++++++++||||++ +++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v 88 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 88 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence 36888899999999999999853 454 6899988643 344678999999999999999943 489
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
+||+.+|+|.+++.... ..+++..+++|+.|||.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 89 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 164 (317)
T d1xkka_ 89 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164 (317)
T ss_dssp EECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred EEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence 99999999999888754 369999999999999999999999 99999999999999999999999999999854321
Q ss_pred -------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 423 -------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 423 -------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
++.++|||||||++|||+| |+.||...... .+...+. .+....
T Consensus 165 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~-----~~~~~i~----~~~~~~-- 233 (317)
T d1xkka_ 165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILE----KGERLP-- 233 (317)
T ss_dssp CC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG-----GHHHHHH----HTCCCC--
T ss_pred cccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHH----cCCCCC--
Confidence 7899999999999999999 78898754332 1222221 111000
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.++..++++ .+++.+||+.||++|||+.||++.|+++..
T Consensus 234 ----~p~~~~~~~---~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 234 ----QPPICTIDV---YMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp ----CCTTBCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCcccCHHH---HHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 111223344 445559999999999999999999988764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-42 Score=343.16 Aligned_cols=225 Identities=20% Similarity=0.278 Sum_probs=165.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL------------ 337 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni------------ 337 (538)
.++|...+.||+|+||.||+|... +++.||||+++... ...+++.+|+..+.++ +|+||
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 356888899999999999999842 24689999997533 3345688888888887 57888
Q ss_pred cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
..++|||||++|+|.++++... ...+++.+++.++.||+.||+|||+ ++|+||||||+|||++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~NILl~ 168 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS 168 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEC
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCccceeEC
Confidence 2468999999999999997542 2358999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHhCC-CCCCCCcccccccc
Q 040267 404 EDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVTGQ-KPFEINASEEGYKG 457 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~elltg~-~p~~~~~~~~~~~~ 457 (538)
+++.+||+|||+|+..... ++.++|||||||++|||+||. .||......+
T Consensus 169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~---- 244 (299)
T d1ywna1 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---- 244 (299)
T ss_dssp GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH----
T ss_pred CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH----
Confidence 9999999999999754321 788999999999999999975 5776432211
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.+......+.... . .+..++++ .+++.+||+.||++||||+||++.|+++.++
T Consensus 245 ----~~~~~~~~~~~~~-----~-~~~~~~~l---~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~ 297 (299)
T d1ywna1 245 ----EFCRRLKEGTRMR-----A-PDYTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297 (299)
T ss_dssp ----HHHHHHHHTCCCC-----C-CTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHhcCCCCC-----C-CccCCHHH---HHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1111122221111 1 11223344 4555599999999999999999999998764
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-43 Score=339.75 Aligned_cols=220 Identities=20% Similarity=0.280 Sum_probs=166.1
Q ss_pred cCCCCCCeEeecCCceEEEEEeC--CC--CEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCC----------cccE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL--DG--SMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNL----------EKPL 341 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~--~~--~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni----------~~~l 341 (538)
++|+..+.||+|+||.||+|+.. ++ ..||||+++... ...++|.+|++++++++|||| ..++
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l 87 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 87 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence 45777889999999999999853 23 378999987532 234679999999999999999 3469
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 421 (538)
||||+++|++.+++.... ..+++..+++++.|+|.||+|||+ ++|+||||||+||+++.++++||+|||+++....
T Consensus 88 v~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 88 VTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 999999999999887644 259999999999999999999999 9999999999999999999999999999986532
Q ss_pred C--------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 422 D--------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 422 ~--------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
. ++.++|||||||++|||+| |+.||...... .+.. .....+...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~-----~~~~---~i~~~~~~~~ 235 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILH---KIDKEGERLP 235 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH---HHHTSCCCCC
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH-----HHHH---HHHhCCCCCC
Confidence 1 6678999999999999998 89999753321 1222 2222211110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHh
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSI 520 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i 520 (538)
. ....+.++. +++.+||+.||++||||.||.+.|++.
T Consensus 236 -----~-~~~~~~~l~---~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 236 -----R-PEDCPQDIY---NVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp -----C-CTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----C-cccccHHHH---HHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 0 112233444 455599999999999999999988864
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-42 Score=337.76 Aligned_cols=213 Identities=18% Similarity=0.237 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|++++++++|||| ..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 4688889999999999999995 56999999999642 2334679999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCC--
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 421 (538)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+|+....
T Consensus 88 Ey~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162 (288)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence 9999999999998765 69999999999999999999999 9999999999999999999999999999985431
Q ss_pred -----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 422 -----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 422 -----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.++.++|||||||++|||+||+.||......+ -... +..+..
T Consensus 163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--------~~~~-i~~~~~------ 227 (288)
T d1uu3a_ 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL--------IFQK-IIKLEY------ 227 (288)
T ss_dssp -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHH-HHTTCC------
T ss_pred cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH--------HHHH-HHcCCC------
Confidence 17889999999999999999999998543211 1111 111111
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+. ...++++.++++ +||+.||++|||++|+++.
T Consensus 228 ~~p-~~~s~~~~~li~---~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 228 DFP-EKFFPKARDLVE---KLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp CCC-TTCCHHHHHHHH---TTSCSSGGGSTTSGGGTCH
T ss_pred CCC-ccCCHHHHHHHH---HHccCCHhHCcCHHHHcCC
Confidence 111 123345555555 9999999999999997653
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=6.6e-42 Score=333.27 Aligned_cols=216 Identities=19% Similarity=0.313 Sum_probs=171.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc----------cHHHHHHHHHHHhcCC-CCCC----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL----------GEKQFLLEMKQVGLLK-HPNL---------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~----------~~~~~~~E~~~l~~l~-H~ni---------- 337 (538)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+.++++++ ||||
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 5788899999999999999995 5789999999865321 1245889999999997 9999
Q ss_pred -cccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 338 -EKPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
..|+|||||++|+|.++++..+ .+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a 157 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 157 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchhe
Confidence 3369999999999999998765 69999999999999999999999 99999999999999999999999999999
Q ss_pred cccCCC----------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc
Q 040267 417 RLTNGD----------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS 468 (538)
Q Consensus 417 ~~~~~~----------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 468 (538)
+..... ++.++||||+||++|||+||+.||......+ ....+.
T Consensus 158 ~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~---------~~~~i~ 228 (277)
T d1phka_ 158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---------MLRMIM 228 (277)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---------HHHHHH
T ss_pred eEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH---------HHHHHH
Confidence 865431 5778999999999999999999998643211 111111
Q ss_pred cCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 469 SGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 469 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+... ...+ .....++++.++++ +||++||++|||++||++
T Consensus 229 ~~~~~-~~~~--~~~~~s~~~~~li~---~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 229 SGNYQ-FGSP--EWDDYSDTVKDLVS---RFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp HTCCC-CCTT--TGGGSCHHHHHHHH---HHCCSSGGGSCCHHHHTT
T ss_pred hCCCC-CCCc--ccccCCHHHHHHHH---HHccCChhHCcCHHHHHc
Confidence 22111 0000 01112345555555 999999999999999865
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-42 Score=341.13 Aligned_cols=225 Identities=27% Similarity=0.408 Sum_probs=174.6
Q ss_pred cCCCCCCeEeecCCceEEEEEeC-CCC--EEEEEEcccc--cccHHHHHHHHHHHhcC-CCCCCc-----------ccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL-DGS--MLAIKRLSAC--KLGEKQFLLEMKQVGLL-KHPNLE-----------KPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~-~~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~H~ni~-----------~~lv 342 (538)
++|+..+.||+|+||.||+|++. +|. .||||+++.. ....++|.+|+++|.++ +||||+ .++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 56777899999999999999964 444 5788887542 23446799999999999 799993 3689
Q ss_pred EeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCe
Q 040267 343 YKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDA 408 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 408 (538)
|||+++|+|.++++... ...++|..+.+++.|||.||.|||+ .+|+||||||+|||++.++.+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence 99999999999997541 2579999999999999999999999 999999999999999999999
Q ss_pred EEEeccCCcccCCC----------------------CCCccCcccHHHHHHHHHhCCC-CCCCCcccccccccHHHHHHH
Q 040267 409 RIMDFGFSRLTNGD----------------------ASLQKDVHGFGVVLLELVTGQK-PFEINASEEGYKGNLVNWIDQ 465 (538)
Q Consensus 409 kl~Dfg~a~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~ 465 (538)
||+|||+++..... ++.++|||||||++|||++|.. ||..... .+....
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~--------~~~~~~ 238 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEK 238 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHH
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH--------HHHHHH
Confidence 99999999754321 7889999999999999999764 6654321 111111
Q ss_pred HhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcC
Q 040267 466 LSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLG 525 (538)
Q Consensus 466 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 525 (538)
+..+.. +.. ....++++.++++ +||+.||++||||+||++.|+++.++..
T Consensus 239 -i~~~~~-----~~~-~~~~~~~~~~li~---~cl~~dP~~RPs~~eil~~L~~i~~~~~ 288 (309)
T d1fvra_ 239 -LPQGYR-----LEK-PLNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEERK 288 (309)
T ss_dssp -GGGTCC-----CCC-CTTBCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred -HHhcCC-----CCC-CccCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence 111111 111 1123345555555 9999999999999999999999987654
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-41 Score=335.88 Aligned_cols=217 Identities=20% Similarity=0.286 Sum_probs=162.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
.+.|+..+.||+|+||+||+|+. .+++.||||.+.... ...+.+.+|++++++++|||| ..|+|||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 35688889999999999999995 468999999997533 234568899999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccCC
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTNG 421 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~ 421 (538)
||++|+|.+++...+ .+++.++..++.||+.||+|||+ .+|+||||||+||++. +++.+||+|||+|+....
T Consensus 88 ~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~ 162 (307)
T d1a06a_ 88 LVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 162 (307)
T ss_dssp CCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred ccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence 999999999998765 69999999999999999999999 9999999999999994 578999999999985432
Q ss_pred ----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 422 ----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 422 ----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
.++.++|||||||++|||+||+.||......+ +. .... .+... .+..
T Consensus 163 ~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-----~~---~~i~-~~~~~--~~~~ 231 (307)
T d1a06a_ 163 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-----LF---EQIL-KAEYE--FDSP 231 (307)
T ss_dssp ----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HH---HHHH-TTCCC--CCTT
T ss_pred CCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH-----HH---HHHh-ccCCC--CCCc
Confidence 17899999999999999999999998533211 11 1111 11110 0001
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
. ....++++.++++ +||+.||++|||++|+++
T Consensus 232 ~-~~~~s~~~~~li~---~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 232 Y-WDDISDSAKDFIR---HLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp T-TTTSCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred c-ccCCCHHHHHHHH---HHccCCHhHCcCHHHHhc
Confidence 1 1122345555555 999999999999999987
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4.6e-41 Score=338.25 Aligned_cols=217 Identities=19% Similarity=0.310 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|+..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||| ..|+|||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 108 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 108 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 4688899999999999999995 579999999997543 334668899999999999999 336999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC--CCCCeEEEeccCCcccCCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD--EDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~a~~~~~~-- 422 (538)
++|+|.+++...+ ..+++.++..|+.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 ~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~ 184 (352)
T d1koba_ 109 SGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 184 (352)
T ss_dssp CCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCCCc
Confidence 9999999887654 359999999999999999999999 9999999999999998 5789999999999865432
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++||||+||++|||+||+.||......+ ...... .+... ..... .
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--------~~~~i~-~~~~~--~~~~~-~ 252 (352)
T d1koba_ 185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--------TLQNVK-RCDWE--FDEDA-F 252 (352)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHH-HCCCC--CCSST-T
T ss_pred eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHH-hCCCC--CCccc-c
Confidence 7889999999999999999999998543211 111111 11110 00101 1
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...+.++.++++ +||+.||.+|||+.|+++
T Consensus 253 ~~~s~~~~~li~---~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 253 SSVSPEAKDFIK---NLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred cCCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 123345555555 999999999999999986
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5.9e-41 Score=337.16 Aligned_cols=218 Identities=17% Similarity=0.334 Sum_probs=172.4
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-ccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||| ..|+|||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 4788999999999999999995 569999999997543 334678899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC--CCCCeEEEeccCCcccCCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD--EDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~a~~~~~~-- 422 (538)
++|+|.+++.... ..+++.++..|+.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 181 (350)
T d1koaa2 106 SGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 181 (350)
T ss_dssp CSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred CCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence 9999999996543 259999999999999999999999 9999999999999996 4688999999999865432
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++|||||||++|||+||+.||...... +....... .... .+....
T Consensus 182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~-~~~~--~~~~~~- 249 (350)
T d1koaa2 182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKS-CDWN--MDDSAF- 249 (350)
T ss_dssp EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-TCCC--SCCGGG-
T ss_pred cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-CCCC--CCcccc-
Confidence 678999999999999999999999754321 11222111 1110 000000
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
...++++.++++ +||+.||++|||++|+++.
T Consensus 250 ~~~s~~~~~li~---~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 250 SGISEDGKDFIR---KLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp GGCCHHHHHHHH---HHCCSSGGGSCCHHHHHHS
T ss_pred cCCCHHHHHHHH---HHccCChhHCcCHHHHhcC
Confidence 112345555555 9999999999999999873
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.4e-41 Score=328.33 Aligned_cols=223 Identities=20% Similarity=0.297 Sum_probs=178.9
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHHHHHHHhcCCCCCCc---------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLLEMKQVGLLKHPNLE--------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~H~ni~--------------- 338 (538)
.++|...+.||+|+||.||+|.. .+|+.||||.++... ...+++.+|++++++++||||+
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 35688889999999999999995 579999999997533 2235689999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+||||+++|+|.+++...+ .+++.++..|+.||+.||+|||+ .+|+||||||+|||++.++..+++|||.++.
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~ 160 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA 160 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred EEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhhh
Confidence 469999999999999998765 59999999999999999999999 9999999999999999999999999998864
Q ss_pred cCC--------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 419 TNG--------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 419 ~~~--------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
... .++.++|||||||++|||+||+.||...... +........+..
T Consensus 161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~~~~~~~~ 232 (277)
T d1o6ya_ 161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--------SVAYQHVREDPI 232 (277)
T ss_dssp CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHCCCC
T ss_pred hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH--------HHHHHHHhcCCC
Confidence 321 1788999999999999999999999854321 112222222111
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHhH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKW-SMYQVYISLCSIA 521 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~i~ 521 (538)
.+.......++++.++++ +|++.||++|| |++|+++.|.++.
T Consensus 233 ----~~~~~~~~~s~~l~~li~---~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 233 ----PPSARHEGLSADLDAVVL---KALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp ----CGGGTSSSCCHHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ----CCchhccCCCHHHHHHHH---HHccCCHhHCHhHHHHHHHHHHHHh
Confidence 111112223445555555 99999999999 8999999998875
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-41 Score=336.14 Aligned_cols=222 Identities=23% Similarity=0.342 Sum_probs=169.7
Q ss_pred cCCCCCCeEeecCCceEEEEEeCC--------CCEEEEEEcccccc--cHHHHHHHHHHHhcC-CCCCC-----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLD--------GSMLAIKRLSACKL--GEKQFLLEMKQVGLL-KHPNL----------- 337 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~H~ni----------- 337 (538)
++|...+.||+|+||.||+|+... +..||||+++.... ...++.+|+..+.++ +||||
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 467777899999999999998422 24799999976443 346788999999888 79999
Q ss_pred cccEEEeecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 338 EKPLVYKYMSNGTLYSLLHSNG--------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
..++||||+++|+|.+++.... ...+++.++++++.|++.||+|||+ .+||||||||+|||++
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT 169 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeecccceeec
Confidence 3468999999999999997653 2468999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHh-CCCCCCCCcccccccc
Q 040267 404 EDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVT-GQKPFEINASEEGYKG 457 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 457 (538)
.++.+||+|||+++..... ++.++|||||||++|||+| |+.||......
T Consensus 170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~----- 244 (299)
T d1fgka_ 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----- 244 (299)
T ss_dssp TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----
T ss_pred CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH-----
Confidence 9999999999999854321 8899999999999999998 78888753321
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
.+... +..+... .. ....++++ .+++.+||+.||++||||.||++.|+++..
T Consensus 245 ~~~~~----i~~~~~~-----~~-p~~~~~~l---~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 245 ELFKL----LKEGHRM-----DK-PSNCTNEL---YMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp HHHHH----HHTTCCC-----CC-CSSCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHH----HHcCCCC-----CC-CccchHHH---HHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 12222 2222111 11 11123344 455559999999999999999999999864
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-41 Score=336.23 Aligned_cols=224 Identities=21% Similarity=0.351 Sum_probs=174.0
Q ss_pred cCCCCCCeEeecCCceEEEEEe------CCCCEEEEEEccccc--ccHHHHHHHHHHHhcC-CCCCC-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML------LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLL-KHPNL-----------EK 339 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~H~ni-----------~~ 339 (538)
++|+..+.||+|+||.||+|++ .+++.||||+++... ....+|.+|+.+++++ +|||| ..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 4677788999999999999985 245689999997543 2345689999999999 69999 34
Q ss_pred cEEEeecCCCCHHHHhhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC
Q 040267 340 PLVYKYMSNGTLYSLLHSNG----------------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD 403 (538)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 403 (538)
++|||||++|+|.++++... ...+++..+.+++.||++||+|||+ .+|+||||||+||+++
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLT 179 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEE
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccccccccccc
Confidence 69999999999999997643 1358999999999999999999999 9999999999999999
Q ss_pred CCCCeEEEeccCCcccCCC-------------------------CCCccCcccHHHHHHHHHhC-CCCCCCCcccccccc
Q 040267 404 EDFDARIMDFGFSRLTNGD-------------------------ASLQKDVHGFGVVLLELVTG-QKPFEINASEEGYKG 457 (538)
Q Consensus 404 ~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~DV~S~Gvvl~elltg-~~p~~~~~~~~~~~~ 457 (538)
.++.+|++|||+++..... ++.++|||||||++|||+|+ .+||......+
T Consensus 180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~---- 255 (311)
T d1t46a_ 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---- 255 (311)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH----
T ss_pred ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH----
Confidence 9999999999999865431 78899999999999999995 44454322211
Q ss_pred cHHHHHHHHhccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHh
Q 040267 458 NLVNWIDQLSSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQ 523 (538)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~ 523 (538)
.+...+. .+. . + ......++++. +|+.+||+.||.+||||+||+++|+++..+
T Consensus 256 ~~~~~i~----~~~-~----~-~~~~~~~~~l~---~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 256 KFYKMIK----EGF-R----M-LSPEHAPAEMY---DIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp HHHHHHH----HTC-C----C-CCCTTSCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHh----cCC-C----C-CCcccccHHHH---HHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 1122221 111 0 0 01122334444 455599999999999999999999987654
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-41 Score=328.95 Aligned_cols=216 Identities=17% Similarity=0.266 Sum_probs=171.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc-------ccHHHHHHHHHHHhcCCCCCCc-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK-------LGEKQFLLEMKQVGLLKHPNLE-----------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~H~ni~-----------~~ 340 (538)
+.|...+.||+|+||+||+|+. .+|+.||||++++.. ...+.+.+|+++|++++||||+ .|
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 5688889999999999999995 579999999986422 2357799999999999999993 36
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC----CeEEEeccCC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF----DARIMDFGFS 416 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a 416 (538)
+|||||++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+|++|||+|
T Consensus 90 iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhhh
Confidence 9999999999999998765 59999999999999999999999 9999999999999998776 5999999999
Q ss_pred cccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+..... ++.++|||||||++|||+||+.||......+ ..... ......
T Consensus 165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--------~~~~i-~~~~~~- 234 (293)
T d1jksa_ 165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANV-SAVNYE- 234 (293)
T ss_dssp EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHH-HTTCCC-
T ss_pred hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH--------HHHHH-HhcCCC-
Confidence 865321 7889999999999999999999998643221 11111 111110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...... ...+.++.++++ +||+.||++|||++|+++
T Consensus 235 -~~~~~~-~~~s~~~~~li~---~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 235 -FEDEYF-SNTSALAKDFIR---RLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp -CCHHHH-TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred -CCchhc-CCCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 000000 112334455555 999999999999999986
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-41 Score=333.03 Aligned_cols=218 Identities=15% Similarity=0.238 Sum_probs=173.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++|...+.||+|+||+||+|.. .+++.||||.++........+.+|+++|++++|||| ..|+|||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~ 83 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence 35688889999999999999995 468899999998766556678899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC--CCeEEEeccCCcccCCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED--FDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~-- 422 (538)
++|+|.+++...+ ..+++.++..|+.||+.||+|||+ .+|+||||||+|||++.+ ..+||+|||+++.....
T Consensus 84 ~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~ 159 (321)
T d1tkia_ 84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence 9999999998654 259999999999999999999999 999999999999999854 58999999999865432
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccC
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTG 482 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 482 (538)
++.++||||+||++|||++|+.||......+ ....... +... ++....
T Consensus 160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~--------~~~~i~~-~~~~--~~~~~~- 227 (321)
T d1tkia_ 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--------IIENIMN-AEYT--FDEEAF- 227 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHH-TCCC--CCHHHH-
T ss_pred ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHh-CCCC--CChhhc-
Confidence 7889999999999999999999998643221 1111111 1110 000000
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 483 KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 483 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
...++++.++++ +|++.||++|||+.|+++
T Consensus 228 ~~~s~~~~~li~---~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 228 KEISIEAMDFVD---RLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred cCCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 112334555555 999999999999999987
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-41 Score=335.37 Aligned_cols=222 Identities=21% Similarity=0.297 Sum_probs=174.0
Q ss_pred cCCCCCCeEeecCCceEEEEEeC------CCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCC-----------ccc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLL------DGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNL-----------EKP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni-----------~~~ 340 (538)
++|...+.||+|+||.||+|.+. +++.||||+++... .....|.+|++++++++|||| ..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 56777789999999999999853 25789999997543 223568999999999999999 346
Q ss_pred EEEeecCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEe
Q 040267 341 LVYKYMSNGTLYSLLHSNG--------NTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMD 412 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 412 (538)
+||||+++|+|.+++.... ...+++..+.+++.|+|+||.|||+ .+|+||||||+|||+|+++++||+|
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl~D 176 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGD 176 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECC
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEEee
Confidence 9999999999999987431 1357999999999999999999999 9999999999999999999999999
Q ss_pred ccCCcccCC-------------------------CCCCccCcccHHHHHHHHHhCC-CCCCCCcccccccccHHHHHHHH
Q 040267 413 FGFSRLTNG-------------------------DASLQKDVHGFGVVLLELVTGQ-KPFEINASEEGYKGNLVNWIDQL 466 (538)
Q Consensus 413 fg~a~~~~~-------------------------~~~~~~DV~S~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~ 466 (538)
||+|+.... .++.++||||||+++|||+||. .||..... .++....
T Consensus 177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~--------~~~~~~i 248 (308)
T d1p4oa_ 177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFV 248 (308)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--------HHHHHHH
T ss_pred cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH
Confidence 999985432 1788999999999999999985 66654222 2222222
Q ss_pred hccCCccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHH
Q 040267 467 SSSGRIKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAE 522 (538)
Q Consensus 467 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~ 522 (538)
. .+...+. ....++. +.+++.+||+.||++||||.||++.|++..+
T Consensus 249 ~-~~~~~~~------p~~~~~~---l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 249 M-EGGLLDK------PDNCPDM---LFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp H-TTCCCCC------CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred H-hCCCCCC------cccchHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 2 2221111 1112234 4555559999999999999999999988654
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-40 Score=331.20 Aligned_cols=212 Identities=21% Similarity=0.271 Sum_probs=173.1
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|...+.||+|+||.||+|+. .+|+.||||++++. ....+++.+|+.+|++++|||| ..|+||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ 84 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence 5788899999999999999995 57999999999753 2345778999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
|||++|+|.+++...+ .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 85 ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence 9999999999998766 58999999999999999999999 99999999999999999999999999999854321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKAL 480 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 480 (538)
++.++||||+||++|||++|+.||......+ .... ...+.+ .+
T Consensus 160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~--------~~~~-i~~~~~------~~ 224 (337)
T d1o6la_ 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--------LFEL-ILMEEI------RF 224 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHH-HHHCCC------CC
T ss_pred cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH--------HHHH-HhcCCC------CC
Confidence 8889999999999999999999998643321 1111 111111 11
Q ss_pred cCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 481 TGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 481 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
....+.++.++++ +||+.||++||+ +.|+++
T Consensus 225 -p~~~s~~~~dli~---~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 225 -PRTLSPEAKSLLA---GLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -CTTSCHHHHHHHH---HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CccCCHHHHHHHH---hhccCCchhhcccccccHHHHHc
Confidence 1123445566665 999999999995 778876
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.9e-40 Score=326.89 Aligned_cols=212 Identities=17% Similarity=0.283 Sum_probs=172.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCC-----------cccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNL-----------EKPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~ 343 (538)
++|+..+.||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|+.++++++|||| ..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 4688889999999999999995 56999999999642 2345779999999999999999 346999
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 84 E~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~ 158 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 158 (316)
T ss_dssp CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred eecCCccccccccccc--cccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEecccc
Confidence 9999999999998776 58899999999999999999999 99999999999999999999999999999865421
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
++.++||||+||++|||+||+.||...... +....... +.. .. ..
T Consensus 159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~~-~~~------~~-p~ 222 (316)
T d1fota_ 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILN-AEL------RF-PP 222 (316)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHH-CCC------CC-CT
T ss_pred ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH--------HHHHHHHc-CCC------CC-CC
Confidence 789999999999999999999999864321 11112111 111 01 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
..++++.++++ +|++.||.+|| |++|+++
T Consensus 223 ~~s~~~~~li~---~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 223 FFNEDVKDLLS---RLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp TSCHHHHHHHH---HHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCHHHHHHHH---HHhhhCHHhccccchhhHHHHHc
Confidence 23345555555 99999999996 8999986
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-40 Score=332.31 Aligned_cols=218 Identities=16% Similarity=0.234 Sum_probs=166.1
Q ss_pred cCCCCC-CeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcC-CCCCCc---------------ccE
Q 040267 280 SNFSAQ-NVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLL-KHPNLE---------------KPL 341 (538)
Q Consensus 280 ~~f~~~-~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~H~ni~---------------~~l 341 (538)
++|... ++||+|+||+||+|+. .+++.||||+++. ...+.+|++++.++ +||||+ .|+
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~i 86 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 86 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEE
Confidence 567765 4699999999999995 5799999999864 35677899987655 899992 379
Q ss_pred EEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC---CCCeEEEeccCCcc
Q 040267 342 VYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE---DFDARIMDFGFSRL 418 (538)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 418 (538)
|||||++|+|.+++...+...+++.++..|+.||+.||+|||+ .+|+||||||+|||+++ ++.+||+|||+|+.
T Consensus 87 vmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~ 163 (335)
T d2ozaa1 87 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 163 (335)
T ss_dssp EEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccceeee
Confidence 9999999999999987665679999999999999999999999 99999999999999985 46799999999985
Q ss_pred cCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccc
Q 040267 419 TNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVI 476 (538)
Q Consensus 419 ~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (538)
.... ++.++|||||||++|||+||+.||......+. ...+......+..
T Consensus 164 ~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-----~~~~~~~i~~~~~---- 234 (335)
T d2ozaa1 164 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----SPGMKTRIRMGQY---- 234 (335)
T ss_dssp CCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------------CCCSCSS----
T ss_pred ccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-----HHHHHHHHhcCCC----
Confidence 4321 77899999999999999999999975433211 1111111111110
Q ss_pred cccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 477 DKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 477 d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+...........+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 235 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp --SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0111111111223445555999999999999999987
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.7e-40 Score=331.90 Aligned_cols=215 Identities=20% Similarity=0.274 Sum_probs=168.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc----ccHHHHHH---HHHHHhcCCCCCCc-----------cc
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK----LGEKQFLL---EMKQVGLLKHPNLE-----------KP 340 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~---E~~~l~~l~H~ni~-----------~~ 340 (538)
++|...+.||+|+||.||+|+. .+|+.||||++.+.. .....+.+ |+++++.++||||+ .|
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 5788999999999999999995 469999999986422 22333444 47778888999993 46
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+...
T Consensus 84 ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~ 158 (364)
T d1omwa3 84 FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS 158 (364)
T ss_dssp EEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred EEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence 9999999999999998765 58999999999999999999999 999999999999999999999999999998543
Q ss_pred CC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccc
Q 040267 421 GD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDK 478 (538)
Q Consensus 421 ~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 478 (538)
.. ++.++|||||||++|||+||+.||......+ ... +........ .
T Consensus 159 ~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----~~~-~~~~~~~~~------~ 226 (364)
T d1omwa3 159 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHE-IDRMTLTMA------V 226 (364)
T ss_dssp SSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC-----HHH-HHHHSSSCC------C
T ss_pred CCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH-----HHH-HHHhcccCC------C
Confidence 21 7889999999999999999999998643221 111 111111110 0
Q ss_pred cccCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 479 ALTGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 479 ~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
.. ....++++.++++ +||+.||++||| ++|+++
T Consensus 227 ~~-~~~~s~~~~~li~---~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 227 EL-PDSFSPELRSLLE---GLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp CC-CSSSCHHHHHHHH---HHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CC-CCCCCHHHHHHHH---HHcccCHHHhCCCcccCHHHHHc
Confidence 11 1223445566665 999999999999 678775
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-40 Score=322.94 Aligned_cols=167 Identities=22% Similarity=0.361 Sum_probs=142.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|++++++++|||| ..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 5788899999999999999995 579999999996533 234679999999999999999 3469999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+.+ ++.+++.......+++..+..++.|++.||+|||+ .+||||||||+|||++.++.+||+|||+|+.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~ 157 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCCcc
Confidence 9975 55666655444579999999999999999999999 99999999999999999999999999999754321
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
++.++||||+||++|||++|+.||...+
T Consensus 158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~ 207 (298)
T d1gz8a_ 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207 (298)
T ss_dssp CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCC
Confidence 5789999999999999999999998643
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-40 Score=323.04 Aligned_cols=218 Identities=21% Similarity=0.268 Sum_probs=161.9
Q ss_pred CCeEeecCCceEEEEEe-CCCCEEEEEEccccccc------HHHHHHHHHHHhcCCCCCC-----------cccEEEeec
Q 040267 285 QNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLG------EKQFLLEMKQVGLLKHPNL-----------EKPLVYKYM 346 (538)
Q Consensus 285 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~~ 346 (538)
.++||+|+||+||+|+. .+|+.||||+++..... .+.+.+|++++++++|||| ..|+||||+
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~ 82 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence 36899999999999995 56999999999653321 2468899999999999999 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC----
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD---- 422 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 422 (538)
+++++..+..... .+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 83 ~~~~~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~ 157 (299)
T d1ua2a_ 83 ETDLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY 157 (299)
T ss_dssp SEEHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC
T ss_pred cchHHhhhhhccc--CCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcccc
Confidence 9887777665443 68999999999999999999999 99999999999999999999999999999754321
Q ss_pred --------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---CCcccccc--
Q 040267 423 --------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS---GRIKDVID-- 477 (538)
Q Consensus 423 --------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d-- 477 (538)
++.++|||||||++|||+||+.||......+ ....+...... ..+.....
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-----~l~~i~~~~~~~~~~~~~~~~~~~ 232 (299)
T d1ua2a_ 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-----QLTRIFETLGTPTEEQWPDMCSLP 232 (299)
T ss_dssp CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHHHHCCCCTTTSSSTTSST
T ss_pred cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-----HHHHHHHhcCCCChhhccchhccc
Confidence 6889999999999999999999997643321 11111111110 00000000
Q ss_pred -----ccccC-------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 478 -----KALTG-------KGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 478 -----~~l~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
..... ...+++ +.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~s~~---~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 233 DYVTFKSFPGIPLHHIFSAAGDD---LLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHH---HHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhhhccCCCCChHHhcccCCHH---HHHHHHHHccCChhhCcCHHHHhC
Confidence 00000 111234 444555999999999999999976
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.1e-39 Score=320.03 Aligned_cols=223 Identities=21% Similarity=0.294 Sum_probs=170.4
Q ss_pred cCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEee
Q 040267 280 SNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYKY 345 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e~ 345 (538)
++|...+.||+|+||+||+|+..+|+.||||+++... ...+++.+|+.++++++|||| ..++++||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 5788889999999999999998899999999996532 234789999999999999999 34589999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC---
Q 040267 346 MSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD--- 422 (538)
Q Consensus 346 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 422 (538)
+.++.+..+....+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+|++|||.+......
T Consensus 82 ~~~~~~~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 156 (286)
T d1ob3a_ 82 LDQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (286)
T ss_dssp CSEEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred ehhhhHHHHHhhcC--CcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCccc
Confidence 98877777665554 69999999999999999999999 99999999999999999999999999998754321
Q ss_pred ---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhcc---CCccccc--
Q 040267 423 ---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSS---GRIKDVI-- 476 (538)
Q Consensus 423 ---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-- 476 (538)
++.++||||+||++|||++|+.||......+. +.. +...... .......
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~----~~~-i~~~~~~~~~~~~~~~~~~ 231 (286)
T d1ob3a_ 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ----LMR-IFRILGTPNSKNWPNVTEL 231 (286)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHH-HHHHHCCCCTTTSTTGGGS
T ss_pred cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH----HHH-HHHhhCCCChhhccchhhh
Confidence 68899999999999999999999986433211 111 1110000 0000000
Q ss_pred ---cccc----------cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 477 ---DKAL----------TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 477 ---d~~l----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
+... .....+..+.++++ +|++.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~---~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLS---KMLKLDPNQRITAKQALE 280 (286)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred hhcccccccccCcchhhhcccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 0000 01112344455555 999999999999999974
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.8e-39 Score=326.44 Aligned_cols=212 Identities=18% Similarity=0.306 Sum_probs=172.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHhcCCCCCCc-----------ccEEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVGLLKHPNLE-----------KPLVY 343 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~H~ni~-----------~~lv~ 343 (538)
++|+..+.||+|+||.||+|+. .+|+.||||++++. ....+.+.+|+++|+.++||||+ .++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 4688889999999999999995 57999999998642 23346789999999999999993 35899
Q ss_pred eecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC-
Q 040267 344 KYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD- 422 (538)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 422 (538)
||+.+|+|.+++...+ .+++..+..|+.||+.||.|||+ .+||||||||+|||++.++.+||+|||+|+.....
T Consensus 121 e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~ 195 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred ccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeeccccc
Confidence 9999999999998765 59999999999999999999999 99999999999999999999999999999865432
Q ss_pred -------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccccccccccCC
Q 040267 423 -------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKALTGK 483 (538)
Q Consensus 423 -------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 483 (538)
++.++|||||||++|||+||+.||...... ....... .+... . ..
T Consensus 196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~-~~~~~------~-p~ 259 (350)
T d1rdqe_ 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--------QIYEKIV-SGKVR------F-PS 259 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH-HCCCC------C-CT
T ss_pred ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH--------HHHHHHh-cCCCC------C-Cc
Confidence 788999999999999999999999753221 1111111 11110 1 11
Q ss_pred CcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 040267 484 GYDDEILQFLQIACKCVAVRPKEKW-----SMYQVYI 515 (538)
Q Consensus 484 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 515 (538)
..++++.++++ +||+.||.+|+ |++|+++
T Consensus 260 ~~s~~~~~li~---~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 260 HFSSDLKDLLR---NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp TCCHHHHHHHH---HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred cCCHHHHHHHH---HHhhhCHHhccccccccHHHHHc
Confidence 23445555665 99999999994 8999986
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-40 Score=324.91 Aligned_cols=212 Identities=22% Similarity=0.292 Sum_probs=169.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccc----cccHHHHHHHHHHHh-cCCCCCC-----------cccEE
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSAC----KLGEKQFLLEMKQVG-LLKHPNL-----------EKPLV 342 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~-~l~H~ni-----------~~~lv 342 (538)
++|...+.||+|+||+||+|+. .+++.||||++++. ....+.+..|+.++. .++|||| ..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 5788889999999999999995 46899999999743 233456777877765 6899999 34699
Q ss_pred EeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC
Q 040267 343 YKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD 422 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 422 (538)
|||+++|+|.+++.... .+++.++..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence 99999999999998765 58999999999999999999999 99999999999999999999999999999854321
Q ss_pred -----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcccccccc
Q 040267 423 -----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKDVIDKA 479 (538)
Q Consensus 423 -----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 479 (538)
++.++|||||||++|||+||+.||.+....+ +......+. +.
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~---------~~~~i~~~~------~~ 221 (320)
T d1xjda_ 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---------LFHSIRMDN------PF 221 (320)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---------HHHHHHHCC------CC
T ss_pred cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH---------HHHHHHcCC------CC
Confidence 7889999999999999999999998643221 111111111 11
Q ss_pred ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHH-HHHH
Q 040267 480 LTGKGYDDEILQFLQIACKCVAVRPKEKWSMY-QVYI 515 (538)
Q Consensus 480 l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~ 515 (538)
. ....+.++.++++ +||+.||++|||+. |+++
T Consensus 222 ~-p~~~s~~~~dli~---~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 222 Y-PRWLEKEAKDLLV---KLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp C-CTTSCHHHHHHHH---HHSCSSGGGSBTTBSCGGG
T ss_pred C-CccCCHHHHHHHH---HhcccCCCCCcCHHHHHHh
Confidence 1 1123445555655 99999999999995 6754
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-39 Score=317.74 Aligned_cols=206 Identities=19% Similarity=0.334 Sum_probs=164.6
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc-------cHHHHHHHHHHHhcCC--CCCC-----------c
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL-------GEKQFLLEMKQVGLLK--HPNL-----------E 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~--H~ni-----------~ 338 (538)
++|...+.||+|+||+||+|+. .+|+.||||+++.... ...++.+|+.++++++ |||| .
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 4688889999999999999995 5799999999864321 1234678999999996 8999 3
Q ss_pred ccEEEeecCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCC-CCeEEEeccCC
Q 040267 339 KPLVYKYMSN-GTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDED-FDARIMDFGFS 416 (538)
Q Consensus 339 ~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 416 (538)
.++||||+.+ +++.+++.... .+++.++..++.|++.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a 158 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSG 158 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccc
Confidence 3699999976 68888887655 59999999999999999999999 999999999999999854 78999999999
Q ss_pred cccCCC----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCccc
Q 040267 417 RLTNGD----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIKD 474 (538)
Q Consensus 417 ~~~~~~----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
+..... ++.++||||+||++|||+||+.||..... ... +..
T Consensus 159 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--------------i~~-~~~-- 221 (273)
T d1xwsa_ 159 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------------IIR-GQV-- 221 (273)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------HHH-CCC--
T ss_pred eecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--------------Hhh-ccc--
Confidence 865432 45678999999999999999999974210 011 110
Q ss_pred cccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 040267 475 VIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYI 515 (538)
Q Consensus 475 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 515 (538)
.+. ...++++.++++ +||+.||++|||++|+++
T Consensus 222 ----~~~-~~~s~~~~~li~---~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 222 ----FFR-QRVSSECQHLIR---WCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp ----CCS-SCCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred ----CCC-CCCCHHHHHHHH---HHccCCHhHCcCHHHHhc
Confidence 011 123345566655 999999999999999976
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=313.00 Aligned_cols=164 Identities=21% Similarity=0.277 Sum_probs=144.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCC-----------cccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNL-----------EKPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni-----------~~~lv~e 344 (538)
++|+..+.||+|+||+||+|+. .+++.||||+++... ...+++.+|+.+++.++|||| ..++|+|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 4688889999999999999995 578999999986433 234678999999999999999 3358999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCC--
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGD-- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 422 (538)
|+.+++|..++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||.++.....
T Consensus 82 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 82 FCDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS
T ss_pred ecccccccccccccc--ccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCCc
Confidence 999999998887665 68999999999999999999999 99999999999999999999999999999865421
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCC
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEI 448 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~ 448 (538)
++.++||||+||++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 204 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCC
Confidence 57899999999999999999999754
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-38 Score=319.26 Aligned_cols=166 Identities=21% Similarity=0.323 Sum_probs=141.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc--ccHHHHHHHHHHHhcCCCCCCc---------------cc
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK--LGEKQFLLEMKQVGLLKHPNLE---------------KP 340 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~H~ni~---------------~~ 340 (538)
+++|...+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|+++|++++||||+ .+
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 34688889999999999999984 579999999997533 2346788999999999999992 24
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccC
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTN 420 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 420 (538)
++++|+.+|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~ 160 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 160 (345)
T ss_dssp EEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence 667788899999999865 49999999999999999999999 999999999999999999999999999987432
Q ss_pred C---------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 421 G---------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 421 ~---------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
. .++.++||||+||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~ 217 (345)
T d1pmea_ 161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 217 (345)
T ss_dssp GGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCC
Confidence 1 16788999999999999999999997643
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-39 Score=324.78 Aligned_cols=233 Identities=18% Similarity=0.220 Sum_probs=166.2
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCCc-----------------ccEE
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNLE-----------------KPLV 342 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni~-----------------~~lv 342 (538)
+|+..++||+|+||+||+|+. .+|+.||||+++.... ...+|+++|++++||||+ .++|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 97 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence 467778999999999999995 4699999999975432 234799999999999992 2589
Q ss_pred EeecCCCCHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccC
Q 040267 343 YKYMSNGTLYSLLHS-NGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTN 420 (538)
Q Consensus 343 ~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~ 420 (538)
||||++|.+..+.+. .....+++.++..|+.||+.||+|||+ .+|+||||||+|||++.++ .+||+|||+++...
T Consensus 98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~ 174 (350)
T d1q5ka_ 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174 (350)
T ss_dssp EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence 999987644443321 122369999999999999999999999 9999999999999999775 89999999998543
Q ss_pred CC-----------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH-------HHHHHHHhcc-
Q 040267 421 GD-----------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL-------VNWIDQLSSS- 469 (538)
Q Consensus 421 ~~-----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~- 469 (538)
.. ++.++||||+||++|||++|+.||......+.....+ .++.......
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 254 (350)
T d1q5ka_ 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254 (350)
T ss_dssp TTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC--
T ss_pred CCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccch
Confidence 21 7899999999999999999999997644322110000 0111111100
Q ss_pred --CCccccccc---cccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHhHH
Q 040267 470 --GRIKDVIDK---ALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSIAE 522 (538)
Q Consensus 470 --~~~~~~~d~---~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i~~ 522 (538)
......... .......++++.++++ +||+.||++|||+.|+++. ++++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~---~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCS---RLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp -CCCCCCCCCCCGGGTSCTTSCHHHHHHHH---HHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hhccccccccCchhhhcccCCCHHHHHHHH---HHccCChhHCcCHHHHhcCHhhccccC
Confidence 001100000 0111122344555555 9999999999999999863 555543
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.9e-38 Score=310.15 Aligned_cols=233 Identities=18% Similarity=0.228 Sum_probs=173.5
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------~~~lv~e~~ 346 (538)
++|+..+.||+|+||.||+|+. .+|+.||||.+.... ..+++..|+++++.++|+|+ ..++||||+
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 4588889999999999999995 568999999886533 23468899999999987775 345899999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeC---CCCCeEEEeccCCcccCC--
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVD---EDFDARIMDFGFSRLTNG-- 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~-- 421 (538)
. |++.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++ .+..+||+|||+|+....
T Consensus 86 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (299)
T d1ckia_ 86 G-PSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 (299)
T ss_dssp C-CBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred C-Cchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence 5 57777665543 369999999999999999999999 9999999999999876 456799999999985421
Q ss_pred ----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCcc
Q 040267 422 ----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRIK 473 (538)
Q Consensus 422 ----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
.++.++|||||||++|||+||+.||.......... ....+....... .
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~-~~~~~~~~~~~~-~-- 236 (299)
T d1ckia_ 161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMST-P-- 236 (299)
T ss_dssp TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHHHS-C--
T ss_pred cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH-HHHHhhcccCCC-C--
Confidence 17889999999999999999999998644322111 111111111100 0
Q ss_pred ccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 474 DVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 474 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
.+.+. ...++++.++++ .||+.+|++||+++++.+.|+++..+.+++.+
T Consensus 237 ---~~~~~-~~~p~~~~~li~---~cl~~~p~~RP~~~~i~~~l~~~~~~~~~~~~ 285 (299)
T d1ckia_ 237 ---IEVLC-KGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 285 (299)
T ss_dssp ---HHHHT-TTSCHHHHHHHH---HHHHSCTTCCCCHHHHHHHHHHHHHHHTCCCS
T ss_pred ---hhHhc-cCCCHHHHHHHH---HHccCChhHCcCHHHHHHHHHHHHHHcCCCCC
Confidence 01111 122344555555 99999999999999999999998776665543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-38 Score=313.12 Aligned_cols=166 Identities=22% Similarity=0.254 Sum_probs=141.2
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEccccc---ccHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACK---LGEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ...+++.+|+++|++++||||.
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~ 89 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 89 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence 5788889999999999999995 579999999986432 3346789999999999999991
Q ss_pred --ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCC
Q 040267 339 --KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFS 416 (538)
Q Consensus 339 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 416 (538)
.++||||++++.+........ .++...+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 90 ~~~~iv~e~~~~~~~~~~~~~~~--~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 90 GSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp -CEEEEEECCCEEHHHHHTCTTC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccCCCccchhhhccc--ccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeeccee
Confidence 368999998876665544433 68999999999999999999999 99999999999999999999999999999
Q ss_pred cccCC----------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 417 RLTNG----------------------------DASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 417 ~~~~~----------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
+.... .++.++||||+||++|||++|+.||....
T Consensus 165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~ 226 (318)
T d3blha1 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 226 (318)
T ss_dssp EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC
Confidence 74331 16789999999999999999999997543
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-37 Score=313.94 Aligned_cols=228 Identities=18% Similarity=0.266 Sum_probs=165.8
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||+||+|.. .+|+.||||+++.... ..+.+.+|+++|++++||||+
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 35788889999999999999995 5699999999975332 235688999999999999992
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.++||||+ +.+|..+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|++|||+|+
T Consensus 97 ~~~lv~e~~-~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~ 169 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 169 (346)
T ss_dssp CCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecc-cccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhccccccccccccccee
Confidence 37999999 56888887654 49999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhc-------c
Q 040267 418 LTNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSS-------S 469 (538)
Q Consensus 418 ~~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~ 469 (538)
..... ++.++||||+||++|||++|+.||......+. +......... .
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~ 245 (346)
T d1cm8a_ 170 QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ----LKEIMKVTGTPPAEFVQR 245 (346)
T ss_dssp ECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHHHCCCCHHHHHT
T ss_pred ccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH----HHHHHhccCCCcHHHHhh
Confidence 65432 67899999999999999999999986433211 1000000000 0
Q ss_pred C----------Ccccccccccc--CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--HHHh
Q 040267 470 G----------RIKDVIDKALT--GKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS--LCSI 520 (538)
Q Consensus 470 ~----------~~~~~~d~~l~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~i 520 (538)
. ...+.....+. ....+.++.++++ +||+.||++|||+.|+++. ++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~---~mL~~dP~~R~ta~eiL~Hp~f~~~ 307 (346)
T d1cm8a_ 246 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE---KMLVLDAEQRVTAGEALAHPYFESL 307 (346)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH---HHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hcchhhhhhhccCCcccccchHHhccCCCHHHHHHHH---HHCcCChhHCcCHHHHhcChhhCcC
Confidence 0 00000000000 0112344455555 9999999999999999974 4443
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=316.56 Aligned_cols=216 Identities=19% Similarity=0.259 Sum_probs=168.8
Q ss_pred cCCCCCCeEeecCCceEEEEEe----CCCCEEEEEEccccc-----ccHHHHHHHHHHHhcCCC-CCCc-----------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML----LDGSMLAIKRLSACK-----LGEKQFLLEMKQVGLLKH-PNLE----------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~H-~ni~----------- 338 (538)
++|+..+.||+|+||+||+|+. .+|+.||||.++... ...+.+.+|++++++++| |||+
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 5688999999999999999984 248899999986432 234678899999999976 7883
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.+++|||+.+|+|.+++...+ .++......++.|++.||+|+|+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhh
Confidence 358999999999999998766 57889999999999999999999 9999999999999999999999999999975
Q ss_pred cCCC--------------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCCc
Q 040267 419 TNGD--------------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGRI 472 (538)
Q Consensus 419 ~~~~--------------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
.... ++.++|||||||++|||+||+.||......+.. ......... ..
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~----~~i~~~~~~-~~- 252 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ----AEISRRILK-SE- 252 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH----HHHHHHHHH-CC-
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHhccc-CC-
Confidence 4321 577899999999999999999999865433221 111111111 00
Q ss_pred cccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 040267 473 KDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWS-----MYQVYI 515 (538)
Q Consensus 473 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 515 (538)
+.. ....++++..+++ +||++||++||| ++|+++
T Consensus 253 -----~~~-~~~~s~~~~~li~---~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 253 -----PPY-PQEMSALAKDLIQ---RLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp -----CCC-CTTSCHHHHHHHH---HHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -----CCC-cccCCHHHHHHHH---HHcccCHHHcCCCCcccHHHHHc
Confidence 011 1123445555665 999999999995 788875
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-38 Score=314.41 Aligned_cols=227 Identities=19% Similarity=0.276 Sum_probs=164.7
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CC-CCEEEEEEccccc---ccHHHHHHHHHHHhcC---CCCCCc------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LD-GSMLAIKRLSACK---LGEKQFLLEMKQVGLL---KHPNLE------------ 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~H~ni~------------ 338 (538)
.++|+..+.||+|+||+||+|+. .+ ++.||||+++... .....+.+|+.+++.+ +||||+
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 46899999999999999999995 44 5679999986432 2233566787776665 799993
Q ss_pred ----ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEecc
Q 040267 339 ----KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFG 414 (538)
Q Consensus 339 ----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 414 (538)
.+++|||+++|++....... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred cCceEEEEEEeccCCchhhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecchh
Confidence 25899999887665544433 3469999999999999999999999 999999999999999999999999999
Q ss_pred CCcccCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccC--
Q 040267 415 FSRLTNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSG-- 470 (538)
Q Consensus 415 ~a~~~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 470 (538)
+++.... .++.++||||+||++|||+||+.||......+. +...........
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~~~~ 237 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ----LGKILDVIGLPGEE 237 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCCCGG
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHH----HHHHHHhhCCCchh
Confidence 9885432 188999999999999999999999986443211 111111100000
Q ss_pred Ccc-------cccc----ccc--cCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 471 RIK-------DVID----KAL--TGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 471 ~~~-------~~~d----~~l--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
.+. .... ... .....++.+.++++ +||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~---~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHH---HHSCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhhccccccchhhccccCCHHHHHHHH---HHCcCChhHCcCHHHHhcC
Confidence 000 0000 000 00112345555555 9999999999999999763
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.6e-37 Score=310.63 Aligned_cols=161 Identities=17% Similarity=0.295 Sum_probs=140.9
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCC-CCCCc-------------ccEEEe
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLK-HPNLE-------------KPLVYK 344 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H~ni~-------------~~lv~e 344 (538)
++|...++||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+++|++++ ||||+ .++|||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e 112 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 112 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence 4788999999999999999995 57899999999753 3567899999999995 99992 458999
Q ss_pred ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCC-CeEEEeccCCcccCCC-
Q 040267 345 YMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDF-DARIMDFGFSRLTNGD- 422 (538)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~- 422 (538)
|+++|+|.++.+ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 113 ~~~~~~L~~~~~-----~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~ 184 (328)
T d3bqca1 113 HVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184 (328)
T ss_dssp CCCSCBGGGTTT-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred ecCCCcHHHHhc-----CCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccCCC
Confidence 999999987643 58999999999999999999999 9999999999999998654 6899999999855421
Q ss_pred ----------------------CCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 423 ----------------------ASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 423 ----------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
++.++||||+||++|||++|+.||....
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~ 234 (328)
T d3bqca1 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 234 (328)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCc
Confidence 6889999999999999999999997543
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-37 Score=310.03 Aligned_cols=166 Identities=22% Similarity=0.332 Sum_probs=142.2
Q ss_pred hcCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc----------------
Q 040267 279 TSNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE---------------- 338 (538)
Q Consensus 279 ~~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~---------------- 338 (538)
.++|...+.||+|+||+||+|+. .+|+.||||+++.... ..+++.+|+++|++++|||++
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 45688889999999999999994 5799999999975432 235688999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.+++++|+.+|+|.+++... .+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+|++|||++..
T Consensus 97 ~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~~ 170 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 170 (348)
T ss_dssp CCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----C
T ss_pred eEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhcc
Confidence 25788999999999999754 49999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCC---------------------CCCccCcccHHHHHHHHHhCCCCCCCCc
Q 040267 419 TNGD---------------------ASLQKDVHGFGVVLLELVTGQKPFEINA 450 (538)
Q Consensus 419 ~~~~---------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~ 450 (538)
.... ++.++||||+||++|||++|+.||....
T Consensus 171 ~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~ 223 (348)
T d2gfsa1 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223 (348)
T ss_dssp CTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC
Confidence 4321 6889999999999999999999998643
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=3.2e-37 Score=303.04 Aligned_cols=233 Identities=15% Similarity=0.204 Sum_probs=176.7
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCC-CCC-----------cccEEEeec
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKH-PNL-----------EKPLVYKYM 346 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H-~ni-----------~~~lv~e~~ 346 (538)
++|...+.||+|+||+||+|+. .+|+.||||.++... ...++.+|++.++.++| +|+ ..++||||+
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 4688889999999999999995 468999999886432 23457788899988875 676 346999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCC-----CCCeEEEeccCCcccCC
Q 040267 347 SNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDE-----DFDARIMDFGFSRLTNG 421 (538)
Q Consensus 347 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~Dfg~a~~~~~ 421 (538)
+|+|.+++...+ ..+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+|+....
T Consensus 84 -~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 84 -GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred -CCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence 689999987655 369999999999999999999999 99999999999999974 57899999999975321
Q ss_pred ------------------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccHHHHHHHHhccCC
Q 040267 422 ------------------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNLVNWIDQLSSSGR 471 (538)
Q Consensus 422 ------------------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (538)
.++.++|||||||++|||+||+.||......... .....+........
T Consensus 159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~--~~~~~i~~~~~~~~ 236 (293)
T d1csna_ 159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK--QKYERIGEKKQSTP 236 (293)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH--HHHHHHHHHHHHSC
T ss_pred CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHH--HHHHHHHhccCCCC
Confidence 1788999999999999999999999854332111 01111111110000
Q ss_pred ccccccccccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHhHHhcCCCcc
Q 040267 472 IKDVIDKALTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYISLCSIAEQLGFSEF 529 (538)
Q Consensus 472 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 529 (538)
.. .+.. ..++++.++++ .|++.+|++||+++.+.+.|+++.++.+..++
T Consensus 237 ~~-----~l~~-~~p~~l~~ii~---~~~~~~~~~rP~y~~l~~~l~~~~~~~~~~~~ 285 (293)
T d1csna_ 237 LR-----ELCA-GFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKVLERLNTTED 285 (293)
T ss_dssp HH-----HHTT-TSCHHHHHHHH---HHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSC
T ss_pred hH-----HhcC-CCCHHHHHHHH---HHhcCCcccCcCHHHHHHHHHHHHHHcCCCCC
Confidence 11 1111 12234455554 99999999999999999999999988877754
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-35 Score=298.41 Aligned_cols=229 Identities=18% Similarity=0.210 Sum_probs=162.3
Q ss_pred cCCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccc---cHHHHHHHHHHHhcCCCCCCc-----------------
Q 040267 280 SNFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKL---GEKQFLLEMKQVGLLKHPNLE----------------- 338 (538)
Q Consensus 280 ~~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~H~ni~----------------- 338 (538)
++|...++||+|+||+||+|.. .+|+.||||+++.... ...++.+|+.++++++||||+
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 5688889999999999999995 4699999999975432 235688999999999999992
Q ss_pred ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCcc
Q 040267 339 KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSRL 418 (538)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 418 (538)
.|+||||+.++ +.+.+.. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+|++|||+++.
T Consensus 97 ~~iv~Ey~~~~-l~~~~~~----~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~~ 168 (355)
T d2b1pa1 97 VYLVMELMDAN-LCQVIQM----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_dssp EEEEEECCSEE-HHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred eEEEEeccchH-HHHhhhc----CCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhhc
Confidence 26999999765 4444432 58999999999999999999999 9999999999999999999999999999875
Q ss_pred cCC----------------------CCCCccCcccHHHHHHHHHhCCCCCCCCcccccccccH--------------HHH
Q 040267 419 TNG----------------------DASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKGNL--------------VNW 462 (538)
Q Consensus 419 ~~~----------------------~~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~~~--------------~~~ 462 (538)
... .++.++||||+||++|||++|+.||............+ ...
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 248 (355)
T d2b1pa1 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_dssp ------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHH
T ss_pred cccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhh
Confidence 432 27889999999999999999999997543221100000 000
Q ss_pred HHHHhccC------CccccccccccCCC---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 463 IDQLSSSG------RIKDVIDKALTGKG---YDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 463 ~~~~~~~~------~~~~~~d~~l~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
........ .............. .......+.+++.+|++.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000100 00111111111111 11223345666669999999999999999864
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2e-32 Score=277.12 Aligned_cols=234 Identities=17% Similarity=0.177 Sum_probs=161.6
Q ss_pred CCCCCCeEeecCCceEEEEEe-CCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCC-----------Ccc---------
Q 040267 281 NFSAQNVLVSTWTGTTYKAML-LDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPN-----------LEK--------- 339 (538)
Q Consensus 281 ~f~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~n-----------i~~--------- 339 (538)
+|...++||+|+||+||+|+. .+|+.||||+++......+.+.+|++++++++|+| |+.
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~ 93 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 93 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence 488889999999999999995 57999999999876555677889999999987655 421
Q ss_pred ----cEEEeecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCC------e
Q 040267 340 ----PLVYKYMSNG-TLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFD------A 408 (538)
Q Consensus 340 ----~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~------~ 408 (538)
+++++++..+ +............+++..+..++.||+.||+|||+ ..+|+||||||+|||++.++. +
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCccccccee
Confidence 2455555444 33344444444578999999999999999999996 378999999999999986543 8
Q ss_pred EEEeccCCcccCCC--------------------CCCccCcccHHHHHHHHHhCCCCCCCCcccccccc--cHHHHHHHH
Q 040267 409 RIMDFGFSRLTNGD--------------------ASLQKDVHGFGVVLLELVTGQKPFEINASEEGYKG--NLVNWIDQL 466 (538)
Q Consensus 409 kl~Dfg~a~~~~~~--------------------~~~~~DV~S~Gvvl~elltg~~p~~~~~~~~~~~~--~~~~~~~~~ 466 (538)
+++|||.+...... ++.++||||+||+++||++|+.||........... .+...+..+
T Consensus 172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 99999998754321 78899999999999999999999975432211110 111111100
Q ss_pred h-----------------ccCCcccccccc----------ccCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 040267 467 S-----------------SSGRIKDVIDKA----------LTGKGYDDEILQFLQIACKCVAVRPKEKWSMYQVYIS 516 (538)
Q Consensus 467 ~-----------------~~~~~~~~~d~~----------l~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 516 (538)
- ........+... ............+.+++.+|++.||.+|||++|+++.
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000000000000 0112234455667777779999999999999999863
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.91 E-value=2.4e-25 Score=220.04 Aligned_cols=166 Identities=36% Similarity=0.544 Sum_probs=150.3
Q ss_pred CChhhHHHHHHhh-cCCCCCCCCCCCCCCCCCCCCCC--cccccccCCC-CCCCEEEEEcCCCCccc--cCcccccCCCC
Q 040267 8 TAEDDVKCLAGIK-SFNDPQGKLSSWSLTNSSVGFIC--RFNGVSCWNG-LENRILSLELEEMNLSG--QVPESLQSCKS 81 (538)
Q Consensus 8 ~~~~~~~~l~~~~-~~~~~~~~l~~W~~~~~~~~~~c--~w~gv~C~~~-~~~~l~~L~L~~n~l~g--~~p~~~~~l~~ 81 (538)
+.++|++||+.|| ++.+|. .+++|..+ ++|| .|.||+|+.. ...||+.|+|++|+++| .+|+++++|++
T Consensus 3 c~~~e~~aLl~~k~~~~~~~-~l~sW~~~----~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~ 77 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPT----TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTT----SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCHHHHHHHHHHHHHCCCCC-cCCCCCCC----CCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcc
Confidence 5688999999999 788874 68999753 4688 5999999863 34589999999999998 58899999999
Q ss_pred CCeEEccC-CcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEec
Q 040267 82 LQVLNLST-NNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSV 160 (538)
Q Consensus 82 L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l 160 (538)
|++|+|++ |+++|.+|.++++ +++|++|+|++|++.+..|..+..+..|+.+++++|.+.+.+|..+.++++|+.+++
T Consensus 78 L~~L~Ls~~N~l~g~iP~~i~~-L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l 156 (313)
T d1ogqa_ 78 LNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccccccc-ccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeec
Confidence 99999996 8999999999988 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccc
Q 040267 161 AYNCLSGRIPSFFNGAMKM 179 (538)
Q Consensus 161 ~~N~l~g~~p~~~~~~~~l 179 (538)
++|.++|.+|..+..+..+
T Consensus 157 ~~n~l~~~ip~~~~~l~~l 175 (313)
T d1ogqa_ 157 DGNRISGAIPDSYGSFSKL 175 (313)
T ss_dssp CSSCCEEECCGGGGCCCTT
T ss_pred ccccccccccccccccccc
Confidence 9999999999888776554
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=1.6e-23 Score=191.38 Aligned_cols=140 Identities=12% Similarity=0.088 Sum_probs=110.6
Q ss_pred CCCeEeecCCceEEEEEeCCCCEEEEEEcccccc-------------------cHHHHHHHHHHHhcCCCCCCc------
Q 040267 284 AQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACKL-------------------GEKQFLLEMKQVGLLKHPNLE------ 338 (538)
Q Consensus 284 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~E~~~l~~l~H~ni~------ 338 (538)
..+.||+|+||+||+|...+|+.||||.++.... .......|...+.++.|.++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 4578999999999999988899999998753110 012345688899999998883
Q ss_pred -ccEEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCCeeeCCCCCeEEEeccCCc
Q 040267 339 -KPLVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCCHPPCLHQNISSSVILVDEDFDARIMDFGFSR 417 (538)
Q Consensus 339 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 417 (538)
.+++|||++++.+.+ ++.....+++.|++.|++|||+ .+|+||||||+|||++++ .++|+|||.|.
T Consensus 84 ~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~~liDFG~a~ 150 (191)
T d1zara2 84 GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GIWIIDFPQSV 150 (191)
T ss_dssp TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EEEECCCTTCE
T ss_pred CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CEEEEECCCcc
Confidence 358999998765432 4455567899999999999999 999999999999999865 58999999998
Q ss_pred ccCCC--------------------CCCccCcccHHHHH
Q 040267 418 LTNGD--------------------ASLQKDVHGFGVVL 436 (538)
Q Consensus 418 ~~~~~--------------------~~~~~DV~S~Gvvl 436 (538)
..... ++.++||||..--+
T Consensus 151 ~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 151 EVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp ETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred cCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 76543 57778888875443
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.68 E-value=9e-17 Score=146.03 Aligned_cols=130 Identities=21% Similarity=0.194 Sum_probs=112.6
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccC-cccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQV-PESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSL 110 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L 110 (538)
++.|.|..|.|++. .+..++.|+|++|+|++.+ +..|..+++|+.|+|++|.+.+..+..+.. +++|++|
T Consensus 5 ~C~C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~-~~~L~~L 83 (192)
T d1w8aa_ 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG-ASHIQEL 83 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEE
T ss_pred CCEEcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccc-cccccee
Confidence 45588999999752 2357899999999998755 567899999999999999999666666555 9999999
Q ss_pred EcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 111 DLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 111 ~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+....+
T Consensus 84 ~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred eeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc
Confidence 999999997777889999999999999999998778889999999999999999987644
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.62 E-value=1.6e-16 Score=155.82 Aligned_cols=139 Identities=30% Similarity=0.480 Sum_probs=101.2
Q ss_pred CCEEEEEcCC-CCccccCcccccCCCCCCeEEccCCcCCCcC------------------------ChhHhhcCCCCcEE
Q 040267 56 NRILSLELEE-MNLSGQVPESLQSCKSLQVLNLSTNNLFGKI------------------------PTQLCKWFPYLVSL 110 (538)
Q Consensus 56 ~~l~~L~L~~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i------------------------p~~~~~~l~~L~~L 110 (538)
..++.|+|++ |+++|.+|++|++|++|++|+|++|++.|.. |..+.. ++.|+.+
T Consensus 76 ~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~-l~~L~~l 154 (313)
T d1ogqa_ 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS-LPNLVGI 154 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG-CTTCCEE
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhcc-Cccccee
Confidence 4678888886 7888888888888888888888887776543 334443 5556666
Q ss_pred EcccCCCCCCCCcc------------------------------------------------------------------
Q 040267 111 DLSNNDLSGTIPHE------------------------------------------------------------------ 124 (538)
Q Consensus 111 ~Ls~N~l~g~~p~~------------------------------------------------------------------ 124 (538)
++++|.++|.+|..
T Consensus 155 ~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~ 234 (313)
T d1ogqa_ 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234 (313)
T ss_dssp ECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 66666655544432
Q ss_pred -----CcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCcc--ccccccccccccccCCCCCCCCCC
Q 040267 125 -----LGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSF--FNGAMKMDMLADSRLGGANLGSKC 196 (538)
Q Consensus 125 -----~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~--~~~~~~l~~~~~~~l~~~~~~~~c 196 (538)
++.+++|+.|+|++|+|+|.+|.+|+++++|++|+|++|+|+|.+|.. +.++..+.+.+|+.+||.|++ .|
T Consensus 235 ~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 235 FDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred ccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCCC-CC
Confidence 223466778899999999999999999999999999999999988863 344555566778888888764 45
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.59 E-value=1.8e-15 Score=137.32 Aligned_cols=121 Identities=22% Similarity=0.292 Sum_probs=107.4
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecC
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSY 138 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~ 138 (538)
+.++.++++|+ .+|..+. +++++|+|++|.|++.++...+..+++|+.|+|++|.+.+..+..+..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 47899999999 7887663 68999999999999777766655699999999999999999999999999999999999
Q ss_pred ccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 139 NRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 139 N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|+|++..|..|.++++|+.|+|++|+|++..|..|..+.++..+
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l 131 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccc
Confidence 99998778889999999999999999999888888877766544
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.53 E-value=1.5e-14 Score=121.14 Aligned_cols=103 Identities=28% Similarity=0.316 Sum_probs=90.7
Q ss_pred EEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCc
Q 040267 60 SLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYN 139 (538)
Q Consensus 60 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N 139 (538)
.|+|++|+++ .++ .+..+++|++|+|++|.|+ .+|+.+.. +++|+.|++++|.++ .+| .++.+++|+.|++++|
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~-l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAA-LRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGG-CTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhh-hhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 6899999998 555 4899999999999999998 78988877 999999999999998 566 5899999999999999
Q ss_pred cccCCC-CccccCCccccEEecccccCCCC
Q 040267 140 RLSGPL-PPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 140 ~l~g~~-p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
+++... ...+..+++|+.|++++|+++..
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 999532 25789999999999999999753
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=1.4e-13 Score=132.55 Aligned_cols=126 Identities=24% Similarity=0.255 Sum_probs=105.7
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++.+..+..+..+++|+.+++++|+|+ .+|...+..+++|+.|+|++|++++..|..|..+++|+.++
T Consensus 105 ~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~-~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 105 GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEecCCcccccccccccchhcccchhhhcccccc-ccChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence 46889999999988777778888899999999999998 55554444488899999999999877778888999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+++|++++..|..|.++++|++|++++|.+++..|..|.++.+|..+
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L 230 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 230 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEE
T ss_pred hhhccccccChhHhhhhhhcccccccccccccccccccccccccCEE
Confidence 99999998889999999999999999999998888777766655443
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=6.4e-14 Score=123.01 Aligned_cols=123 Identities=18% Similarity=0.157 Sum_probs=99.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.++..|+|++|+++ .++..+..+++|+.|+|++|.++ .++. +.. +++|++|++++|+++...+..+..+++|+.|+
T Consensus 18 ~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~~-~~~-l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 18 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG-FPL-LRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp TSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EECC-CCC-CSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccCC-ccc-CcchhhhhcccccccCCCccccccccccccce
Confidence 36899999999998 45776788999999999999998 6754 444 99999999999999854444567899999999
Q ss_pred ecCccccCCCC--ccccCCccccEEecccccCCCCCCc----ccccccccccccc
Q 040267 136 LSYNRLSGPLP--PQLSSLVRLKQFSVAYNCLSGRIPS----FFNGAMKMDMLAD 184 (538)
Q Consensus 136 ls~N~l~g~~p--~~l~~l~~L~~l~l~~N~l~g~~p~----~~~~~~~l~~~~~ 184 (538)
|++|+++. ++ ..+..+++|++|++++|.++.. |. .+..+++|..++.
T Consensus 94 L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~~~-~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 94 LTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETT
T ss_pred eccccccc-cccccccccccccchhhcCCCccccc-cchHHHHHHHCCCcCeeCC
Confidence 99999984 54 4688899999999999999753 42 3566677766643
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=4e-13 Score=128.01 Aligned_cols=117 Identities=27% Similarity=0.266 Sum_probs=66.9
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhh-----------------------cCCCCcEEEcc
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCK-----------------------WFPYLVSLDLS 113 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-----------------------~l~~L~~L~Ls 113 (538)
+++.|+|++|+|+. +|. ++.+++|+.|+|++|++++ +|..+.. .+.+++.|+++
T Consensus 56 ~L~~L~L~~N~l~~-l~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~ 132 (266)
T d1p9ag_ 56 RLTQLNLDRAELTK-LQV-DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132 (266)
T ss_dssp TCCEEECTTSCCCE-EEC-CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECT
T ss_pred cccccccccccccc-ccc-ccccccccccccccccccc-cccccccccccccccccccccceeecccccccccccccccc
Confidence 45555555555552 222 3445555555555555542 2333222 24555555555
Q ss_pred cCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCCCCCccccccc
Q 040267 114 NNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAM 177 (538)
Q Consensus 114 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 177 (538)
+|.++...+..+..+++|+.|++++|++++..|..|..+++|++|+|++|+|+ .+|..+..+.
T Consensus 133 ~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~ 195 (266)
T d1p9ag_ 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSH 195 (266)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred ccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCC
Confidence 55555444445566677777777777777666666777777777777777777 5665544333
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=3.7e-13 Score=128.30 Aligned_cols=118 Identities=27% Similarity=0.278 Sum_probs=91.4
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
+..++.|+|++|+|++..+..|.++++|++|+|++|+|+ .+|.. .. +++|++|+|++|+++ .+|..+..+++|+.|
T Consensus 30 p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~~-~~-l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L 105 (266)
T d1p9ag_ 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GT-LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVL 105 (266)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-SC-CTTCCEEECCSSCCS-SCCCCTTTCTTCCEE
T ss_pred CcCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccccc-cc-ccccccccccccccc-ccccccccccccccc
Confidence 357999999999999877788999999999999999998 67753 34 899999999999998 567778888888888
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCCcccccc
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGA 176 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~ 176 (538)
++++|.+.+..+..+..+.+++.|++++|.++...+..+..+
T Consensus 106 ~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l 147 (266)
T d1p9ag_ 106 DVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPT 147 (266)
T ss_dssp ECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred cccccccceeeccccccccccccccccccccceecccccccc
Confidence 888888776555555555666666666666554444444433
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=9.8e-13 Score=126.48 Aligned_cols=115 Identities=23% Similarity=0.213 Sum_probs=103.0
Q ss_pred CCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEe
Q 040267 55 ENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTL 134 (538)
Q Consensus 55 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 134 (538)
...+..+++++|+|++..+..|..+++|+.|+|++|+|++ +|+..+..+++|+++++++|++++..|..|..+++|++|
T Consensus 128 ~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~-l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L 206 (284)
T d1ozna_ 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206 (284)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred hcccchhhhccccccccChhHhccccchhhcccccCcccc-cchhhhccccccchhhhhhccccccChhHhhhhhhcccc
Confidence 3568999999999998778889999999999999999995 544444459999999999999999999999999999999
Q ss_pred eecCccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 135 YLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 135 ~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
++++|.+++..|..|.++++|++|++++|.+.+.-+
T Consensus 207 ~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 207 YLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp ECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cccccccccccccccccccccCEEEecCCCCCCCcc
Confidence 999999998888899999999999999999987533
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.29 E-value=3.6e-12 Score=106.20 Aligned_cols=94 Identities=26% Similarity=0.338 Sum_probs=79.0
Q ss_pred CeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCccccEEeccc
Q 040267 83 QVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAY 162 (538)
Q Consensus 83 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~ 162 (538)
|.|+|++|+++ .+|. +.. +++|++||+++|+++ .+|..++.+++|++|++++|.|++ +| .+.++++|+.|++++
T Consensus 1 R~L~Ls~n~l~-~l~~-l~~-l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~ 74 (124)
T d1dcea3 1 RVLHLAHKDLT-VLCH-LEQ-LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 74 (124)
T ss_dssp SEEECTTSCCS-SCCC-GGG-GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CEEEcCCCCCC-CCcc-ccc-CCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCC
Confidence 68999999999 7764 666 999999999999998 789899999999999999999994 66 499999999999999
Q ss_pred ccCCCCCC-cccccccccccc
Q 040267 163 NCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 163 N~l~g~~p-~~~~~~~~l~~~ 182 (538)
|+++.... ..+..++++..+
T Consensus 75 N~i~~~~~~~~l~~~~~L~~L 95 (124)
T d1dcea3 75 NRLQQSAAIQPLVSCPRLVLL 95 (124)
T ss_dssp SCCCSSSTTGGGGGCTTCCEE
T ss_pred CccCCCCCchhhcCCCCCCEE
Confidence 99986432 445555555443
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=6.5e-12 Score=109.14 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=83.5
Q ss_pred EcCCCCccccCcccccCCCCCCeEEccCCc-CCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCcc
Q 040267 62 ELEEMNLSGQVPESLQSCKSLQVLNLSTNN-LFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNR 140 (538)
Q Consensus 62 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~ 140 (538)
+.+++++. .+|..+..+++|++|++++|+ |+ .++...+..+++|+.|+|++|+|+..-|..|..+++|++|+|++|+
T Consensus 14 ~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 14 RCTRDGAL-DSLHHLPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp ECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EecCCCCc-cCcccccCccccCeeecCCCcccc-ccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence 33445554 457778889999999998765 77 6776655569999999999999997777889999999999999999
Q ss_pred ccCCCCccccCCccccEEecccccCCC
Q 040267 141 LSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 141 l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
|+ .+|.......+|+.|+|++|.|.-
T Consensus 92 l~-~l~~~~~~~~~l~~L~L~~Np~~C 117 (156)
T d2ifga3 92 LE-SLSWKTVQGLSLQELVLSGNPLHC 117 (156)
T ss_dssp CS-CCCSTTTCSCCCCEEECCSSCCCC
T ss_pred Cc-ccChhhhccccccccccCCCcccC
Confidence 99 566665555689999999998863
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=1e-11 Score=120.41 Aligned_cols=137 Identities=18% Similarity=0.257 Sum_probs=98.4
Q ss_pred CCCCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 40 GFICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 40 ~~~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
.+-|.|++|.|.+. .+..++.|+|++|+|+...+..|.++++|++|++++|.+....|..+.. +++|++|+
T Consensus 7 ~c~c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~-l~~L~~L~ 85 (305)
T d1xkua_ 7 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP-LVKLERLY 85 (305)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEEE
T ss_pred CCEecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhC-CCccCEec
Confidence 45588999999752 2356899999999999666668999999999999999999555666655 99999999
Q ss_pred cccCCCCCCCCcc------------------------------------------------CcCCCCCcEeeecCccccC
Q 040267 112 LSNNDLSGTIPHE------------------------------------------------LGNCVYLNTLYLSYNRLSG 143 (538)
Q Consensus 112 Ls~N~l~g~~p~~------------------------------------------------~~~l~~L~~L~ls~N~l~g 143 (538)
+++|+++ .+|.. +..+++|+.+++++|.++
T Consensus 86 l~~n~l~-~l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~- 163 (305)
T d1xkua_ 86 LSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 163 (305)
T ss_dssp CCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred ccCCccC-cCccchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-
Confidence 9999886 33322 122455666677776666
Q ss_pred CCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 144 PLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 144 ~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
.+|..+ +++|+.|++++|..++..+..+.+++.+..
T Consensus 164 ~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~ 199 (305)
T d1xkua_ 164 TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAK 199 (305)
T ss_dssp SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred ccCccc--CCccCEEECCCCcCCCCChhHhhccccccc
Confidence 344433 356777777777777766666665554443
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=1.5e-11 Score=106.73 Aligned_cols=98 Identities=22% Similarity=0.255 Sum_probs=79.7
Q ss_pred CcccccccCCCC----------CCCEEEEEcCCCC-ccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEE
Q 040267 43 CRFNGVSCWNGL----------ENRILSLELEEMN-LSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLD 111 (538)
Q Consensus 43 c~w~gv~C~~~~----------~~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 111 (538)
+.+.+++|.+.. ..+++.|+|++|+ |+..-+..|.++++|+.|+|++|+|+ .|++..+..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCC-EECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccC-Cccccccccccccccee
Confidence 357888887511 2478999998775 88766778999999999999999999 56555555599999999
Q ss_pred cccCCCCCCCCccCcCCCCCcEeeecCcccc
Q 040267 112 LSNNDLSGTIPHELGNCVYLNTLYLSYNRLS 142 (538)
Q Consensus 112 Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 142 (538)
|++|+|+ .+|.......+|+.|+|++|.|.
T Consensus 87 Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 87 LSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred ccCCCCc-ccChhhhccccccccccCCCccc
Confidence 9999999 67776655668999999999885
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=1e-11 Score=108.62 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=83.3
Q ss_pred ccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCccccCCc
Q 040267 74 ESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLSSLV 153 (538)
Q Consensus 74 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~ 153 (538)
+.+.++..|++|+|++|+++ .+|..... +++|+.|||++|+++ .++ .+..+++|++|+|++|+++...+..+..++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~-~i~~~~~~-l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~ 87 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIP-VIENLGAT-LDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALP 87 (162)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGG-TTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhccCcCcCcEEECCCCCCC-ccCccccc-cccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccc
Confidence 34678889999999999999 77765444 999999999999998 564 589999999999999999965555567899
Q ss_pred cccEEecccccCCCCCC-cccccccccccc
Q 040267 154 RLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 154 ~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
+|+.|++++|+++.... ..+..+++|..+
T Consensus 88 ~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L 117 (162)
T d1a9na_ 88 DLTELILTNNSLVELGDLDPLASLKSLTYL 117 (162)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEE
T ss_pred ccccceeccccccccccccccccccccchh
Confidence 99999999999985311 234555554433
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.18 E-value=4.3e-11 Score=115.90 Aligned_cols=113 Identities=24% Similarity=0.277 Sum_probs=92.1
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.+++++|+++ .+|..+ +++|+.|++++|..++..+..+.. ++.+++|++++|.+++..|..+..+++|++|+
T Consensus 150 ~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~-~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~ 225 (305)
T d1xkua_ 150 KKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKG-LNNLAKLGLSFNSISAVDNGSLANTPHLRELH 225 (305)
T ss_dssp TTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTT-CTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred cccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhc-cccccccccccccccccccccccccccceeee
Confidence 35788999999887 455433 678999999999998777777665 88899999999999877788888899999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFF 173 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~ 173 (538)
|++|.|+ .+|.+|.++++|+.|+|++|+|+..-...|
T Consensus 226 L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f 262 (305)
T d1xkua_ 226 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 262 (305)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred ccccccc-ccccccccccCCCEEECCCCccCccChhhc
Confidence 9999998 678889999999999999999885433333
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.15 E-value=6.1e-11 Score=108.35 Aligned_cols=103 Identities=29% Similarity=0.349 Sum_probs=74.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|.+++. + .++.+++|+.|++++|+++ .+|. +.. +++|+.|++++|.+. .++ .+..++.|+.++
T Consensus 68 ~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~-~l~~-l~~-l~~L~~L~l~~~~~~-~~~-~l~~l~~l~~l~ 140 (210)
T d1h6ta2 68 PNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVK-DLSS-LKD-LKKLKSLSLEHNGIS-DIN-GLVHLPQLESLY 140 (210)
T ss_dssp TTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC-CGGG-GTT-CTTCCEEECTTSCCC-CCG-GGGGCTTCCEEE
T ss_pred CCCCEEeCCCccccCc-c-ccccCcccccccccccccc-cccc-ccc-ccccccccccccccc-ccc-cccccccccccc
Confidence 4689999999998864 3 3678899999999999988 5663 555 888888888888875 333 466666777777
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
+++|.+++ +..+..+++|+.+++++|++++
T Consensus 141 ~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~ 170 (210)
T d1h6ta2 141 LGNNKITD--ITVLSRLTKLDTLSLEDNQISD 170 (210)
T ss_dssp CCSSCCCC--CGGGGGCTTCSEEECCSSCCCC
T ss_pred cccccccc--cccccccccccccccccccccc
Confidence 77777663 2345566677777777777765
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=7.2e-11 Score=110.15 Aligned_cols=101 Identities=18% Similarity=0.256 Sum_probs=71.3
Q ss_pred CCcccccccCCC--------CCCCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcc
Q 040267 42 ICRFNGVSCWNG--------LENRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLS 113 (538)
Q Consensus 42 ~c~w~gv~C~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls 113 (538)
-|....|.|.+. ....++.|+|++|+++...+..|.++++|++|+|++|.+...+|...+..++.++++++.
T Consensus 7 ~C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 7 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp EECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CCcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 366777888641 124689999999999866666899999999999999998877766544446666666654
Q ss_pred c-CCCCCCCCccCcCCCCCcEeeecCcccc
Q 040267 114 N-NDLSGTIPHELGNCVYLNTLYLSYNRLS 142 (538)
Q Consensus 114 ~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 142 (538)
. |++....+..|..+++|++|++++|.++
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred ccccccccccccccccccccccccchhhhc
Confidence 3 4555555555666666666666666554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.09 E-value=7.2e-13 Score=120.22 Aligned_cols=108 Identities=25% Similarity=0.318 Sum_probs=89.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|+++ .++ .|..+++|+.|+|++|.++ .+|..... +++|++|++++|+++. ++ .+..+++|++|+
T Consensus 48 ~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~-~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~ 121 (198)
T d1m9la_ 48 KACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAV-ADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHH-HHHCCEEECSEEECCC-HH-HHHHHHHSSEEE
T ss_pred cccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccc-cccccccccccccccc-cc-cccccccccccc
Confidence 46899999999998 454 5889999999999999998 77765544 6789999999999984 43 578899999999
Q ss_pred ecCccccCCCC--ccccCCccccEEecccccCCCCCC
Q 040267 136 LSYNRLSGPLP--PQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 136 ls~N~l~g~~p--~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
|++|+++. ++ ..+..+++|+.|++++|.+....+
T Consensus 122 L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 157 (198)
T d1m9la_ 122 MSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp ESEEECCC-HHHHHHHTTTTTCSEEEECSSHHHHHHC
T ss_pred cccchhcc-ccccccccCCCccceeecCCCccccCcc
Confidence 99999984 44 468899999999999998875444
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.08 E-value=1.9e-10 Score=104.03 Aligned_cols=116 Identities=27% Similarity=0.401 Sum_probs=84.6
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+|++|++++..| ++++++|+.|++++|.+. .+|. +.. ++.|+.|++++|.+.. + ..+..+++|+.|+
T Consensus 62 ~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~~-l~~-l~~L~~L~l~~~~~~~-~-~~~~~l~~L~~L~ 134 (199)
T d2omxa2 62 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DITP-LAN-LTNLTGLTLFNNQITD-I-DPLKNLTNLNRLE 134 (199)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCGG-GTT-CTTCSEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred CCcCcCccccccccCccc--ccCCcccccccccccccc-cccc-ccc-cccccccccccccccc-c-cccchhhhhHHhh
Confidence 468889999988886433 888888899999888887 5553 444 8888888888888764 2 3477788888888
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
+++|++.. +| .+..+++|+.|++++|++++..| +.++++|..+
T Consensus 135 l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l~~--l~~l~~L~~L 177 (199)
T d2omxa2 135 LSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERL 177 (199)
T ss_dssp CCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hhhhhhcc-cc-cccccccccccccccccccCCcc--ccCCCCCCEE
Confidence 88888873 44 57788888888888888876422 4445444433
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.05 E-value=2e-10 Score=114.35 Aligned_cols=40 Identities=33% Similarity=0.365 Sum_probs=20.2
Q ss_pred cCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC
Q 040267 126 GNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 126 ~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
..+++++.|++++|++++. + .+..+++|+.|++++|+|++
T Consensus 304 ~~~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~L~~n~l~~ 343 (384)
T d2omza2 304 SNLKNLTYLTLYFNNISDI-S-PVSSLTKLQRLFFANNKVSD 343 (384)
T ss_dssp GGCTTCSEEECCSSCCSCC-G-GGGGCTTCCEEECCSSCCCC
T ss_pred chhcccCeEECCCCCCCCC-c-ccccCCCCCEEECCCCCCCC
Confidence 3444555555555555542 2 14455555555555555553
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.98 E-value=9.5e-10 Score=99.26 Aligned_cols=114 Identities=23% Similarity=0.377 Sum_probs=94.0
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|++++|.+.. ++ .+..++.|+.|++++|.+.. ++ .+.. +++|+.|++++|++. .+| .+..+++|+.|+
T Consensus 84 ~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~-~~-~~~~-l~~L~~L~l~~n~l~-~~~-~l~~~~~L~~L~ 156 (199)
T d2omxa2 84 TKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITD-ID-PLKN-LTNLNRLELSSNTIS-DIS-ALSGLTSLQQLN 156 (199)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCC-CG-GGTT-CTTCSEEECCSSCCC-CCG-GGTTCTTCSEEE
T ss_pred ccccccccccccccc-cc-cccccccccccccccccccc-cc-ccch-hhhhHHhhhhhhhhc-ccc-cccccccccccc
Confidence 579999999999874 44 38899999999999999884 33 3445 999999999999997 444 588999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMD 180 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 180 (538)
+++|++++ ++ .+.++++|+.|++++|+++. +| .+.++++|+
T Consensus 157 l~~n~l~~-l~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~ 197 (199)
T d2omxa2 157 FSSNQVTD-LK-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLE 197 (199)
T ss_dssp CCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCS
T ss_pred cccccccC-Cc-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCC
Confidence 99999995 44 38999999999999999986 44 355666554
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.94 E-value=1.4e-09 Score=100.16 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCC-------------
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIP------------- 122 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p------------- 122 (538)
.+++.|+|++|.+++..| +..+++|+.|++++|.++ .++. +.. +++|+.+++++|...+..+
T Consensus 63 ~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~~-l~~-l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~ 137 (227)
T d1h6ua2 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVSA-IAG-LQSIKTLDLTSTQITDVTPLAGLSNLQVLYLD 137 (227)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCGG-GTT-CTTCCEEECTTSCCCCCGGGTTCTTCCEEECC
T ss_pred CCCcEeecCCceeecccc--cccccccccccccccccc-cccc-ccc-cccccccccccccccccchhccccchhhhhch
Confidence 468888888888875443 677777777777777766 4442 333 6666666666665543211
Q ss_pred -------ccCcCCCCCcEeeecCccccCCCCccccCCccccEEecccccCCC
Q 040267 123 -------HELGNCVYLNTLYLSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 123 -------~~~~~l~~L~~L~ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
..+..+++|+.|++++|.+++. + .+.++++|+.|++++|++++
T Consensus 138 ~~~~~~~~~~~~~~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L~Ls~n~l~~ 187 (227)
T d1h6ua2 138 LNQITNISPLAGLTNLQYLSIGNAQVSDL-T-PLANLSKLTTLKADDNKISD 187 (227)
T ss_dssp SSCCCCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC
T ss_pred hhhhchhhhhccccccccccccccccccc-h-hhcccccceecccCCCccCC
Confidence 1234456667777777766632 2 26666777777777777664
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.92 E-value=1.1e-11 Score=112.19 Aligned_cols=106 Identities=26% Similarity=0.328 Sum_probs=85.8
Q ss_pred cCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeeecCccccCCCCcccc
Q 040267 71 QVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYLSYNRLSGPLPPQLS 150 (538)
Q Consensus 71 ~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~l~ 150 (538)
.+|.++..+++|+.|+|++|+++ .++ .+.. +++|+.|+|++|.++ .+|.....+++|+.|++++|+++. ++ .+.
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~-l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~ 112 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSG-MENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIE 112 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHH-HTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccC-CccccChhhcccccc-cccccccccccccccccccccccc-cc-ccc
Confidence 45678999999999999999999 676 4666 999999999999998 677766667889999999999994 44 488
Q ss_pred CCccccEEecccccCCCCCC-cccccccccccc
Q 040267 151 SLVRLKQFSVAYNCLSGRIP-SFFNGAMKMDML 182 (538)
Q Consensus 151 ~l~~L~~l~l~~N~l~g~~p-~~~~~~~~l~~~ 182 (538)
.+++|+.|++++|+++.... ..+..+++|..+
T Consensus 113 ~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T d1m9la_ 113 KLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred ccccccccccccchhccccccccccCCCcccee
Confidence 89999999999999985322 345555555443
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.90 E-value=2.4e-09 Score=97.37 Aligned_cols=114 Identities=21% Similarity=0.241 Sum_probs=92.7
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
.++.|++++|++++. + .+..+++|++|+|++|.+++ ++. +.. +++|++|++++|+++ .+| .+..+++|+.|++
T Consensus 47 ~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~-l~~-~~~-l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IKP-LAN-LKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSL 119 (210)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTT-CTTCCEEECCSSCCC-CGG-GGTTCTTCCEEEC
T ss_pred CccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccC-ccc-ccc-Ccccccccccccccc-ccc-ccccccccccccc
Confidence 589999999999853 3 37889999999999999995 553 455 999999999999998 456 5889999999999
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCCCccccccccccc
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDM 181 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~ 181 (538)
++|.++ .+ ..+..+++|+.+++++|.+++.. .+..+++|+.
T Consensus 120 ~~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~~~--~~~~l~~L~~ 160 (210)
T d1h6ta2 120 EHNGIS-DI-NGLVHLPQLESLYLGNNKITDIT--VLSRLTKLDT 160 (210)
T ss_dssp TTSCCC-CC-GGGGGCTTCCEEECCSSCCCCCG--GGGGCTTCSE
T ss_pred cccccc-cc-ccccccccccccccccccccccc--cccccccccc
Confidence 999997 34 45888999999999999998632 3444444443
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.90 E-value=1.2e-09 Score=108.53 Aligned_cols=116 Identities=23% Similarity=0.366 Sum_probs=95.9
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
.+++.|+++++++++..+ +..++.++.++++.|.+++ ++ .+.. +++++.|++++|++++. + .+..+++|+.|+
T Consensus 263 ~~L~~L~l~~~~l~~~~~--~~~~~~l~~l~~~~n~l~~-~~-~~~~-~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~ 335 (384)
T d2omza2 263 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLED-IS-PISN-LKNLTYLTLYFNNISDI-S-PVSSLTKLQRLF 335 (384)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSC-CG-GGGG-CTTCSEEECCSSCCSCC-G-GGGGCTTCCEEE
T ss_pred ccCCEeeccCcccCCCCc--ccccccccccccccccccc-cc-ccch-hcccCeEECCCCCCCCC-c-ccccCCCCCEEE
Confidence 578999999999986543 7889999999999999985 43 3445 89999999999999964 3 388999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++ +| .+.++++|++|++++|++++..| +.++++|+.+
T Consensus 336 L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L 378 (384)
T d2omza2 336 FANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQL 378 (384)
T ss_dssp CCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEE
T ss_pred CCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEe
Confidence 99999995 55 69999999999999999997655 5656555443
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.71 E-value=1.2e-08 Score=93.66 Aligned_cols=116 Identities=26% Similarity=0.349 Sum_probs=92.2
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.++++++...+.. .+...+.++.+.++.+.+....+ +.. +++|+.|++++|.+++. + .++.+++|+.|+
T Consensus 107 ~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~--~~~-~~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L~ 179 (227)
T d1h6ua2 107 QSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAG-LTNLQYLSIGNAQVSDL-T-PLANLSKLTTLK 179 (227)
T ss_dssp TTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGG-CTTCCEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred ccccccccccccccccc--hhccccchhhhhchhhhhchhhh--hcc-ccccccccccccccccc-h-hhcccccceecc
Confidence 46889999999887543 36778899999999999884433 444 89999999999998743 3 388999999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccCCCCCCcccccccccccc
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~~ 182 (538)
|++|++++ +|+ +.++++|++|++++|++++. |. +.++++|..+
T Consensus 180 Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N~lt~i-~~-l~~l~~L~~L 222 (227)
T d1h6ua2 180 ADDNKISD-ISP-LASLPNLIEVHLKNNQISDV-SP-LANTSNLFIV 222 (227)
T ss_dssp CCSSCCCC-CGG-GGGCTTCCEEECTTSCCCBC-GG-GTTCTTCCEE
T ss_pred cCCCccCC-Chh-hcCCCCCCEEECcCCcCCCC-cc-cccCCCCCEE
Confidence 99999995 554 88999999999999999964 42 5666666544
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.69 E-value=2.9e-08 Score=96.77 Aligned_cols=98 Identities=33% Similarity=0.337 Sum_probs=82.1
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEeee
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLYL 136 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 136 (538)
+++.|||++++|+ .+|+. +++|++|+|++|+|+ .+|.. +.+|+.|++++|+++ .++.. .+.|++|++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~----~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc----hhhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 5889999999998 57753 578999999999999 88864 567999999999998 55532 246999999
Q ss_pred cCccccCCCCccccCCccccEEecccccCCCCC
Q 040267 137 SYNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRI 169 (538)
Q Consensus 137 s~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~ 169 (538)
++|.++ .+|. ++.+++|+.|++++|.++...
T Consensus 106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~ 136 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLP 136 (353)
T ss_dssp CSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCC
T ss_pred cccccc-cccc-hhhhccceeeccccccccccc
Confidence 999999 5775 688999999999999998543
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=2.1e-08 Score=92.88 Aligned_cols=108 Identities=18% Similarity=0.191 Sum_probs=89.5
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCc-cCcCCCCCcEeeec
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPH-ELGNCVYLNTLYLS 137 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~ls 137 (538)
..++.++.+++ .+|+.+- +++++|+|++|+++ .+|...+..+++|++|+|++|.+...+|. .|..++.++++++.
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~-~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCC-EECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCC-ccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 46778888888 7887653 58999999999998 67765444599999999999999876654 67889999999986
Q ss_pred -CccccCCCCccccCCccccEEecccccCCCCCC
Q 040267 138 -YNRLSGPLPPQLSSLVRLKQFSVAYNCLSGRIP 170 (538)
Q Consensus 138 -~N~l~g~~p~~l~~l~~L~~l~l~~N~l~g~~p 170 (538)
.|++....|..|.++++|+.+++++|.+....+
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~ 120 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 120 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCC
T ss_pred ccccccccccccccccccccccccchhhhccccc
Confidence 478887778889999999999999999975433
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.39 E-value=4.8e-08 Score=92.99 Aligned_cols=126 Identities=21% Similarity=0.169 Sum_probs=64.7
Q ss_pred CEEEEEcCCCCccccCcccccCCCCCCeEEccCC-cCCCcCChhHhhcCCCCcEEEcccC-CCCCC-CCccCc-CCCCCc
Q 040267 57 RILSLELEEMNLSGQVPESLQSCKSLQVLNLSTN-NLFGKIPTQLCKWFPYLVSLDLSNN-DLSGT-IPHELG-NCVYLN 132 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~ip~~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~-~l~~L~ 132 (538)
+++.|+|+++++++..+..++.+++|++|+|+++ .++..--..+...+++|++|+++++ .++.. ++..+. .+++|+
T Consensus 72 ~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~ 151 (284)
T d2astb2 72 KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETIT 151 (284)
T ss_dssp CCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCC
T ss_pred CcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccc
Confidence 4666777777666666666666777777777663 4442111122233667777777664 33211 111111 234555
Q ss_pred EeeecCc--cccCC-CCccccCCccccEEecccc-cCCCCCCcccccccccccc
Q 040267 133 TLYLSYN--RLSGP-LPPQLSSLVRLKQFSVAYN-CLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 133 ~L~ls~N--~l~g~-~p~~l~~l~~L~~l~l~~N-~l~g~~p~~~~~~~~l~~~ 182 (538)
.|++++. .++.. +...+.++++|+.|++++| .+++.....+..+++|+.+
T Consensus 152 ~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L 205 (284)
T d2astb2 152 QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 205 (284)
T ss_dssp EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred hhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEE
Confidence 5555532 22211 2222345667777777765 4555555555555555444
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.31 E-value=1.5e-08 Score=87.86 Aligned_cols=65 Identities=32% Similarity=0.392 Sum_probs=28.5
Q ss_pred cCCCCCCeEEccCCcCCCc--CChhHhhcCCCCcEEEcccCCCCCCCCc-cCcCCCCCcEeeecCccccC
Q 040267 77 QSCKSLQVLNLSTNNLFGK--IPTQLCKWFPYLVSLDLSNNDLSGTIPH-ELGNCVYLNTLYLSYNRLSG 143 (538)
Q Consensus 77 ~~l~~L~~L~Ls~N~l~g~--ip~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~ls~N~l~g 143 (538)
..+++|++|+|++|+++.. ++..+.. +++|+.|+|++|.++ .++. .......|+.|+|++|.++.
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~-l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~ 129 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSD 129 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHH-STTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSS
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhh-CCcccccccccCccc-cchhhhhhhccccceeecCCCCcCc
Confidence 3455555555555555421 1122222 555555555555554 2222 12222344555555555543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=5.7e-08 Score=98.06 Aligned_cols=110 Identities=27% Similarity=0.338 Sum_probs=84.5
Q ss_pred CEEEEEcCCCCccccC-cccccCCCCCCeEEccCCcCCC----cCChhHhhcCCCCcEEEcccCCCCCC----CCccCc-
Q 040267 57 RILSLELEEMNLSGQV-PESLQSCKSLQVLNLSTNNLFG----KIPTQLCKWFPYLVSLDLSNNDLSGT----IPHELG- 126 (538)
Q Consensus 57 ~l~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g----~ip~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~- 126 (538)
+|+.||+++|++++.- ..-+..+++|+.|+|++|.++- .++..+.. +++|++|||++|.++.. +...+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~-~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRV-NPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHT-CTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhc-CCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 5899999999998642 3345668899999999999872 23344444 89999999999998521 222232
Q ss_pred CCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCC
Q 040267 127 NCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 127 ~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
...+|++|+|++|+++.. ++..+..+++|++|++++|.++.
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 345799999999999853 46678889999999999999874
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.18 E-value=3.4e-06 Score=81.58 Aligned_cols=95 Identities=31% Similarity=0.383 Sum_probs=72.8
Q ss_pred CCEEEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCCCCccCcCCCCCcEee
Q 040267 56 NRILSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGTIPHELGNCVYLNTLY 135 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 135 (538)
..++.|+|++|+|+ .+|.. +.+|+.|++++|+++ .++. ..+.|++|++++|.+. .+|. ++.+++|+.|+
T Consensus 58 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~----lp~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~ 126 (353)
T d1jl5a_ 58 PHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD----LPPLLEYLGVSNNQLE-KLPE-LQNSSFLKIID 126 (353)
T ss_dssp TTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS----CCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhh----hccccccccccccccc-cccc-hhhhccceeec
Confidence 46899999999999 77865 468999999999998 6663 1457999999999998 6774 68899999999
Q ss_pred ecCccccCCCCccccCCccccEEecccccC
Q 040267 136 LSYNRLSGPLPPQLSSLVRLKQFSVAYNCL 165 (538)
Q Consensus 136 ls~N~l~g~~p~~l~~l~~L~~l~l~~N~l 165 (538)
+++|.+++ .|... ..+..+.+..+..
T Consensus 127 l~~~~~~~-~~~~~---~~l~~l~~~~~~~ 152 (353)
T d1jl5a_ 127 VDNNSLKK-LPDLP---PSLEFIAAGNNQL 152 (353)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCC
T ss_pred cccccccc-ccccc---ccccchhhccccc
Confidence 99999984 44332 3344444444443
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.18 E-value=8e-08 Score=83.19 Aligned_cols=122 Identities=23% Similarity=0.174 Sum_probs=82.2
Q ss_pred EEEEcCCCCccccCcccccCCCCCCeEEccCCcCCCcCChhHhhcCCCCcEEEcccCCCCCC--CCccCcCCCCCcEeee
Q 040267 59 LSLELEEMNLSGQVPESLQSCKSLQVLNLSTNNLFGKIPTQLCKWFPYLVSLDLSNNDLSGT--IPHELGNCVYLNTLYL 136 (538)
Q Consensus 59 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~l 136 (538)
..|+++++.. .+.+..+..+..|++.+|... .++ .+...+++|++|+|++|+++.. ++..+..+++|+.|+|
T Consensus 25 ~~Ldls~l~~----~~~l~~~~~~~~l~~~~~~~~-~l~-~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~L 98 (162)
T d1koha1 25 QALDLKGLRS----DPDLVAQNIDVVLNRRSSMAA-TLR-IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNL 98 (162)
T ss_dssp CCBCCCCCSS----CTTTTTTTCCCCTTSHHHHHH-HHH-HHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCC
T ss_pred CeeecccCCC----CchhhhccchhhcchhhhHhh-hhH-HHHHhCCCCCEeeCCCccccCCchhHHHHhhCCccccccc
Confidence 4456655432 123455555666666655543 443 3444499999999999999843 2345678999999999
Q ss_pred cCccccCCCCc-cccCCccccEEecccccCCCCCCcc-------ccccccccccccccC
Q 040267 137 SYNRLSGPLPP-QLSSLVRLKQFSVAYNCLSGRIPSF-------FNGAMKMDMLADSRL 187 (538)
Q Consensus 137 s~N~l~g~~p~-~l~~l~~L~~l~l~~N~l~g~~p~~-------~~~~~~l~~~~~~~l 187 (538)
++|.++. +++ .+....+|+.|++++|.++...... +..+++|..+++..+
T Consensus 99 s~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LDg~~v 156 (162)
T d1koha1 99 SGNELKS-ERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLDGHEL 156 (162)
T ss_dssp TTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEETTEEC
T ss_pred ccCcccc-chhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEECcCCC
Confidence 9999994 443 3444567999999999998765532 445677777766544
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.00 E-value=1.4e-06 Score=82.51 Aligned_cols=127 Identities=20% Similarity=0.222 Sum_probs=67.7
Q ss_pred CCEEEEEcCCC-Ccccc-CcccccCCCCCCeEEccCC-cCCCc-CChhHhhcCCCCcEEEcccC--CCCCC-CCccCcCC
Q 040267 56 NRILSLELEEM-NLSGQ-VPESLQSCKSLQVLNLSTN-NLFGK-IPTQLCKWFPYLVSLDLSNN--DLSGT-IPHELGNC 128 (538)
Q Consensus 56 ~~l~~L~L~~n-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~-ip~~~~~~l~~L~~L~Ls~N--~l~g~-~p~~~~~l 128 (538)
.+++.|+|+++ +++.. +..-...+++|++|+++++ .++.. ++..+....++|+.|++++. .++.. +......+
T Consensus 95 ~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~ 174 (284)
T d2astb2 95 SNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRC 174 (284)
T ss_dssp TTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHC
T ss_pred CCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccccccccc
Confidence 45788888874 55532 2222345777888888774 34321 22223333456677776643 23211 22223456
Q ss_pred CCCcEeeecCc-cccCCCCccccCCccccEEecccc-cCCCCCCcccccccccccc
Q 040267 129 VYLNTLYLSYN-RLSGPLPPQLSSLVRLKQFSVAYN-CLSGRIPSFFNGAMKMDML 182 (538)
Q Consensus 129 ~~L~~L~ls~N-~l~g~~p~~l~~l~~L~~l~l~~N-~l~g~~p~~~~~~~~l~~~ 182 (538)
++|++|+|++| .+++..+..+.++++|++|+++++ .+++.....+..+++|+.+
T Consensus 175 ~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L 230 (284)
T d2astb2 175 PNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL 230 (284)
T ss_dssp TTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred ccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEE
Confidence 66777777664 455555566666667777777663 4554433344444444433
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.99 E-value=5.6e-07 Score=87.72 Aligned_cols=111 Identities=20% Similarity=0.201 Sum_probs=79.1
Q ss_pred CCEEEEEcCCCCccc----cCcccccCCCCCCeEEccCCcCCCc-----CChhHhhcCCCCcEEEcccCCCCCC----CC
Q 040267 56 NRILSLELEEMNLSG----QVPESLQSCKSLQVLNLSTNNLFGK-----IPTQLCKWFPYLVSLDLSNNDLSGT----IP 122 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~-----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p 122 (538)
..++.|++++|+++. .+...+..++.|+.|+|++|.++.. +...+.. +++|+.|+|++|.++.. +.
T Consensus 158 ~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~-~~~L~~L~Ls~N~i~~~g~~~L~ 236 (344)
T d2ca6a1 158 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAY-CQELKVLDLQDNTFTHLGSSALA 236 (344)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGG-CTTCCEEECCSSCCHHHHHHHHH
T ss_pred cccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcc-hhhhccccccccccccccccccc
Confidence 468889999988863 2344566788999999999988732 1122333 78899999999988532 34
Q ss_pred ccCcCCCCCcEeeecCccccCCCCc----cccC--CccccEEecccccCCC
Q 040267 123 HELGNCVYLNTLYLSYNRLSGPLPP----QLSS--LVRLKQFSVAYNCLSG 167 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~g~~p~----~l~~--l~~L~~l~l~~N~l~g 167 (538)
..+..+++|++|+|++|.+++.-.. .+.. ..+|+.|++++|+++.
T Consensus 237 ~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 237 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCCh
Confidence 5567889999999999988753222 2222 3568999999998864
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=7.1e-07 Score=89.75 Aligned_cols=113 Identities=21% Similarity=0.302 Sum_probs=81.1
Q ss_pred CCEEEEEcCCCCccccCccc----c-cCCCCCCeEEccCCcCCCcCChhHh---hcCCCCcEEEcccCCCCCC----CCc
Q 040267 56 NRILSLELEEMNLSGQVPES----L-QSCKSLQVLNLSTNNLFGKIPTQLC---KWFPYLVSLDLSNNDLSGT----IPH 123 (538)
Q Consensus 56 ~~l~~L~L~~n~l~g~~p~~----~-~~l~~L~~L~Ls~N~l~g~ip~~~~---~~l~~L~~L~Ls~N~l~g~----~p~ 123 (538)
..+..+++++|.++..-... + .....|+.+++++|.++..-...+. ...++|++|+|++|+++.. ++.
T Consensus 283 ~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~ 362 (460)
T d1z7xw1 283 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 362 (460)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhh
Confidence 46888999999987532222 2 2346899999999998854333222 2367899999999998642 333
Q ss_pred cCc-CCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCCC
Q 040267 124 ELG-NCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 124 ~~~-~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
.+. ..+.|++|+|++|+|+.. ++..+..+++|++|++++|+|+..
T Consensus 363 ~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~ 412 (460)
T d1z7xw1 363 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 412 (460)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred hhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHH
Confidence 343 467799999999999742 455667778999999999998753
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.80 E-value=1.5e-06 Score=84.63 Aligned_cols=112 Identities=19% Similarity=0.232 Sum_probs=84.0
Q ss_pred CCEEEEEcCCCCcc--c--cC---------cccccCCCCCCeEEccCCcCCCc----CChhHhhcCCCCcEEEcccCCCC
Q 040267 56 NRILSLELEEMNLS--G--QV---------PESLQSCKSLQVLNLSTNNLFGK----IPTQLCKWFPYLVSLDLSNNDLS 118 (538)
Q Consensus 56 ~~l~~L~L~~n~l~--g--~~---------p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~ 118 (538)
..++.|+|++|.+. | .+ .......+.|+.|++++|+++.. +...+.. .+.|+.|+|++|+++
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~-~~~L~~L~L~~n~i~ 199 (344)
T d2ca6a1 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS-HRLLHTVKMVQNGIR 199 (344)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH-CTTCCEEECCSSCCC
T ss_pred ccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhh-hhhhccccccccccc
Confidence 46999999999873 1 11 11234678899999999998732 2233334 789999999999986
Q ss_pred CC-----CCccCcCCCCCcEeeecCccccCC----CCccccCCccccEEecccccCCCC
Q 040267 119 GT-----IPHELGNCVYLNTLYLSYNRLSGP----LPPQLSSLVRLKQFSVAYNCLSGR 168 (538)
Q Consensus 119 g~-----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~l~~l~~L~~l~l~~N~l~g~ 168 (538)
.. +...+..+++|+.|+|++|.++.. +...+..+++|+.|++++|.+++.
T Consensus 200 ~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~ 258 (344)
T d2ca6a1 200 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 258 (344)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred ccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCch
Confidence 32 334577889999999999998642 445677889999999999998754
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.77 E-value=3.3e-05 Score=71.43 Aligned_cols=138 Identities=14% Similarity=0.045 Sum_probs=86.7
Q ss_pred HHHHHhcCCCCCCeEeecCCceEEEEEeCCCCEEEEEEccccc-ccHHHHHHHHHHHhcCC----CCCC--------ccc
Q 040267 274 HLIAATSNFSAQNVLVSTWTGTTYKAMLLDGSMLAIKRLSACK-LGEKQFLLEMKQVGLLK----HPNL--------EKP 340 (538)
Q Consensus 274 ~l~~~~~~f~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~----H~ni--------~~~ 340 (538)
++.+.-+.|...+..+.++.+.||+... +++.+.+|+..... .....+.+|...+..+. -|.+ ..+
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~ 86 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence 5555555665544433444568998865 56677888876432 23345677888776653 2433 346
Q ss_pred EEEeecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------------
Q 040267 341 LVYKYMSNGTLYSLLHSNGNTALDWPSRLRIGLGAARGLSWLHHCC---------------------------------- 386 (538)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~---------------------------------- 386 (538)
+||+++++.++.+..... ....+++.++++.++.||+..
T Consensus 87 lv~~~l~G~~~~~~~~~~-------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T d1j7la_ 87 LLMSEADGVLCSEEYEDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEEECCSSEEHHHHTTTC-------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGS
T ss_pred EEEEeccccccccccccc-------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccc
Confidence 999999998876544221 112234445555555555310
Q ss_pred ----------------------CCCccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 387 ----------------------HPPCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 387 ----------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
...++|+|+.|.||+++++...-|.||+.+..-
T Consensus 160 ~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T d1j7la_ 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp TTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred ccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcccC
Confidence 123789999999999998766779999887653
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.50 E-value=2.4e-05 Score=67.40 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=45.5
Q ss_pred CCEEEEEcCCC-Ccccc----CcccccCCCCCCeEEccCCcCCCcCC----hhHhhcCCCCcEEEcccCCCCCCC----C
Q 040267 56 NRILSLELEEM-NLSGQ----VPESLQSCKSLQVLNLSTNNLFGKIP----TQLCKWFPYLVSLDLSNNDLSGTI----P 122 (538)
Q Consensus 56 ~~l~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ip----~~~~~~l~~L~~L~Ls~N~l~g~~----p 122 (538)
+.++.|+|+++ .++.. +-..+...+.|+.|+|++|.++..-. ..+.. .+.|+.|+|++|.++..- -
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~-n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIET-SPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHH-CSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhh-cccccceeeehhhcchHHHHHHH
Confidence 45777777753 34321 23345566677777777777652211 12222 456677777777665321 1
Q ss_pred ccCcCCCCCcEeeecCcccc
Q 040267 123 HELGNCVYLNTLYLSYNRLS 142 (538)
Q Consensus 123 ~~~~~l~~L~~L~ls~N~l~ 142 (538)
..+...++|+.|+|++|.+.
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSC
T ss_pred HHHHhCCcCCEEECCCCcCC
Confidence 12444455555555555443
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.30 E-value=0.00025 Score=67.79 Aligned_cols=125 Identities=13% Similarity=0.071 Sum_probs=77.6
Q ss_pred CceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC------------------cccEEEeecCCCCH---
Q 040267 293 TGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------------------EKPLVYKYMSNGTL--- 351 (538)
Q Consensus 293 ~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------------------~~~lv~e~~~~gsL--- 351 (538)
--.||++..++|+.+++|..+....+.+++..|...+..+....+ ..+.+++|++|..+
T Consensus 35 EN~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~ 114 (325)
T d1zyla1 35 ENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD 114 (325)
T ss_dssp SSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred cceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence 357999999999999999998776677888999998888754444 23578888876321
Q ss_pred --HHH---------hh----cCC---CCCCCHH-------------------HH---HHHHHHHHHHHHHH-hcCCCCCc
Q 040267 352 --YSL---------LH----SNG---NTALDWP-------------------SR---LRIGLGAARGLSWL-HHCCHPPC 390 (538)
Q Consensus 352 --~~~---------l~----~~~---~~~l~~~-------------------~~---~~i~~~ia~~L~yL-H~~~~~~i 390 (538)
.++ ++ ... ...+++. .+ ...+.++...+.-. .+....++
T Consensus 115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l 194 (325)
T d1zyla1 115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR 194 (325)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence 111 11 100 0111211 11 12222232222221 22234578
Q ss_pred cccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 391 LHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 391 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
+|+|+.+.|||++++ ..+.||+-+..-
T Consensus 195 iHgDlh~~NvL~~~~--~~~IDFdd~~~g 221 (325)
T d1zyla1 195 LHGDCHAGNILWRDG--PMFVDLDDARNG 221 (325)
T ss_dssp CCSSCSGGGEEESSS--EEECCCTTCCEE
T ss_pred ecCCCCcccEEEeCC--ceEEechhcccC
Confidence 999999999999754 468999988753
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.06 E-value=0.00023 Score=65.12 Aligned_cols=130 Identities=13% Similarity=0.104 Sum_probs=73.5
Q ss_pred EeecC-CceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-------------cccEEEeecCCCCHHH
Q 040267 288 LVSTW-TGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL-------------EKPLVYKYMSNGTLYS 353 (538)
Q Consensus 288 ig~G~-~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni-------------~~~lv~e~~~~gsL~~ 353 (538)
+..|. .+.||+....++..+++|...... ...+..|...++.+....+ ..++||||+++-++.+
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 33444 367899998788889999876433 2346678887776643333 3468999998754422
Q ss_pred H--------------h---hcCC--CCCC--CHHHHHHHH--------------------HHHHHHHHHHhcC----CCC
Q 040267 354 L--------------L---HSNG--NTAL--DWPSRLRIG--------------------LGAARGLSWLHHC----CHP 388 (538)
Q Consensus 354 ~--------------l---~~~~--~~~l--~~~~~~~i~--------------------~~ia~~L~yLH~~----~~~ 388 (538)
. + |... ...+ .+.....-. ......+..+.+. ...
T Consensus 96 ~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (255)
T d1nd4a_ 96 SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDL 175 (255)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCE
T ss_pred ccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCc
Confidence 1 1 1100 0000 011000000 0011122222221 112
Q ss_pred CccccCCCCCCeeeCCCCCeEEEeccCCccc
Q 040267 389 PCLHQNISSSVILVDEDFDARIMDFGFSRLT 419 (538)
Q Consensus 389 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 419 (538)
.++|+|+.|.||+++++..+-|.||+.+..-
T Consensus 176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g 206 (255)
T d1nd4a_ 176 VVTHGDACLPNIMVENGRFSGFIDCGRLGVA 206 (255)
T ss_dssp EEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred eEEeCCCCCcceEEeCCceEEEEEchhcccC
Confidence 4799999999999998766789999887653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.95 E-value=0.001 Score=65.12 Aligned_cols=65 Identities=14% Similarity=0.053 Sum_probs=41.1
Q ss_pred CeEeecCCceEEEEEeCC-CCEEEEEEcccc--------cccHHHHHHHHHHHhcCC-C-----CCC------cccEEEe
Q 040267 286 NVLVSTWTGTTYKAMLLD-GSMLAIKRLSAC--------KLGEKQFLLEMKQVGLLK-H-----PNL------EKPLVYK 344 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~-H-----~ni------~~~lv~e 344 (538)
+.||.|....||+....+ ++.|+||.-... .....+...|.+.|..+. + |.+ ..++|||
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE 111 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVME 111 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEEC
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcCCCCEEEEe
Confidence 458899999999998644 678999975321 112345566887776652 2 222 3458999
Q ss_pred ecCCCC
Q 040267 345 YMSNGT 350 (538)
Q Consensus 345 ~~~~gs 350 (538)
|+++..
T Consensus 112 ~L~~~~ 117 (392)
T d2pula1 112 DLSHLK 117 (392)
T ss_dssp CCTTSE
T ss_pred ccCCcc
Confidence 997643
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.84 E-value=0.00017 Score=61.76 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=63.9
Q ss_pred cCCCCCCeEEccCC-cCCCc----CChhHhhcCCCCcEEEcccCCCCCCC----CccCcCCCCCcEeeecCccccCC---
Q 040267 77 QSCKSLQVLNLSTN-NLFGK----IPTQLCKWFPYLVSLDLSNNDLSGTI----PHELGNCVYLNTLYLSYNRLSGP--- 144 (538)
Q Consensus 77 ~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~~----p~~~~~l~~L~~L~ls~N~l~g~--- 144 (538)
.+.++|++|+|+++ .++.. +-..+.. .+.|+.|+|++|.+...- ...+...++|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~-n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~ 90 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACN-SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 90 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTT-CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhh-CCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHH
Confidence 45689999999974 46532 1112223 578999999999986322 22345678999999999999842
Q ss_pred -CCccccCCccccEEecccccCCC
Q 040267 145 -LPPQLSSLVRLKQFSVAYNCLSG 167 (538)
Q Consensus 145 -~p~~l~~l~~L~~l~l~~N~l~g 167 (538)
+-..+...++|+.|++++|.+..
T Consensus 91 ~l~~aL~~n~sL~~L~l~~n~~~~ 114 (167)
T d1pgva_ 91 RLLRSTLVTQSIVEFKADNQRQSV 114 (167)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCC
T ss_pred HHHHHHHhCCcCCEEECCCCcCCC
Confidence 22346667889999999997663
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.59 E-value=0.00022 Score=60.94 Aligned_cols=109 Identities=18% Similarity=0.230 Sum_probs=65.8
Q ss_pred CCEEEEEcCC-CCcccc----CcccccCCCCCCeEEccCCcCCCcCChhHh---hcCCCCcEEEcccCCCCCC----CCc
Q 040267 56 NRILSLELEE-MNLSGQ----VPESLQSCKSLQVLNLSTNNLFGKIPTQLC---KWFPYLVSLDLSNNDLSGT----IPH 123 (538)
Q Consensus 56 ~~l~~L~L~~-n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~---~~l~~L~~L~Ls~N~l~g~----~p~ 123 (538)
..++.|+|++ ++++.. +-..+...++|+.|+|++|.++..--..++ ...+.|+.+++++|.++.. +-.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4688888887 456432 344566778888888888887643222221 2267788888888877532 223
Q ss_pred cCcCCCCCcEeee--cCccccC----CCCccccCCccccEEeccccc
Q 040267 124 ELGNCVYLNTLYL--SYNRLSG----PLPPQLSSLVRLKQFSVAYNC 164 (538)
Q Consensus 124 ~~~~l~~L~~L~l--s~N~l~g----~~p~~l~~l~~L~~l~l~~N~ 164 (538)
.+...++|+.++| ++|.+.. .+...+...++|+.|+++.|.
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 4556677776444 4555542 133344556677777776553
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.51 E-value=0.002 Score=60.83 Aligned_cols=163 Identities=8% Similarity=-0.022 Sum_probs=89.8
Q ss_pred cCHHHHHHHhcCCCCCCeEe-----ecCCceEEEEEeCCCCEEEEEEcccccccHHHHHHHHHHHhcCCCCCC-------
Q 040267 270 LKLVHLIAATSNFSAQNVLV-----STWTGTTYKAMLLDGSMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL------- 337 (538)
Q Consensus 270 ~~~~~l~~~~~~f~~~~~ig-----~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni------- 337 (538)
++.+|+.....+|..++... .|---+.|+.+..+|+ +++|+..... ..+++..|++++..+...++
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~-~~~~l~~~~~~l~~L~~~g~pvp~pi~ 80 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV-EKNDLPFFLGLMQHLAAKGLSCPLPLP 80 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC-CHHHHHHHHHHHHhhhhccccccccce
Confidence 45678888888888765544 4545678999886664 8899886432 23455667777777754444
Q ss_pred ------------cccEEEeecCCCCHHH--------------Hhhc----CC-C---CCC-----------------CHH
Q 040267 338 ------------EKPLVYKYMSNGTLYS--------------LLHS----NG-N---TAL-----------------DWP 366 (538)
Q Consensus 338 ------------~~~lv~e~~~~gsL~~--------------~l~~----~~-~---~~l-----------------~~~ 366 (538)
....++.+..+..... .++. .. . ... ...
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (316)
T d2ppqa1 81 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 160 (316)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred ecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcch
Confidence 1234555555432110 0110 00 0 000 000
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCccccCCCCCCeeeCCCCCeEEEeccCCcccCCCCCCccCcccHHHHHHHHHh
Q 040267 367 SRLRIGLGAARGLSWLHH-CCHPPCLHQNISSSVILVDEDFDARIMDFGFSRLTNGDASLQKDVHGFGVVLLELVT 441 (538)
Q Consensus 367 ~~~~i~~~ia~~L~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~DV~S~Gvvl~ellt 441 (538)
.....+..+...+.-.+. ....++||+|+.+.||+++.+...-|.||+.+..- .=+|=+++++..++.
T Consensus 161 ~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~-------~~~~DLAi~~~~~~~ 229 (316)
T d2ppqa1 161 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACND-------LLAYDVSICLNAWCF 229 (316)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEE-------EHHHHHHHHHHHHSB
T ss_pred hHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccccc-------hhhhhHHHHHHHHhh
Confidence 111222222233333222 23467999999999999998877789999986432 223345666665543
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.93 E-value=0.0063 Score=59.28 Aligned_cols=63 Identities=11% Similarity=0.116 Sum_probs=42.4
Q ss_pred CeEeecCCceEEEEEeCCC--------CEEEEEEcccccccHHHHHHHHHHHhcCCCCCC--------cccEEEeecCCC
Q 040267 286 NVLVSTWTGTTYKAMLLDG--------SMLAIKRLSACKLGEKQFLLEMKQVGLLKHPNL--------EKPLVYKYMSNG 349 (538)
Q Consensus 286 ~~ig~G~~g~vy~~~~~~~--------~~vavK~~~~~~~~~~~~~~E~~~l~~l~H~ni--------~~~lv~e~~~~g 349 (538)
+.|+.|-.-.+|+....++ ..|.+++... ........+|..+++.+.-.++ .-.+|+||+++.
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~g~I~efi~g~ 126 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSR 126 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEE
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCCceEEEEeccc
Confidence 4577788889999986543 4577776653 3334456688888887753344 234789999864
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.39 E-value=0.0045 Score=52.27 Aligned_cols=93 Identities=17% Similarity=0.148 Sum_probs=62.4
Q ss_pred ccccCCCCCCeEEccC-CcCCCcCChhHhh---cCCCCcEEEcccCCCCCCCC----ccCcCCCCCcEeeecCccccCC-
Q 040267 74 ESLQSCKSLQVLNLST-NNLFGKIPTQLCK---WFPYLVSLDLSNNDLSGTIP----HELGNCVYLNTLYLSYNRLSGP- 144 (538)
Q Consensus 74 ~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~---~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~ls~N~l~g~- 144 (538)
....+.++|+.|+|++ |.++...-..++. ..++|++|+|++|.++...- ..+...++|+.+++++|.++..
T Consensus 11 ~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g 90 (166)
T d1io0a_ 11 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 90 (166)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchh
Confidence 3345678999999997 5565322222222 36889999999999864322 2345678999999999988632
Q ss_pred ---CCccccCCccccEEec--ccccCC
Q 040267 145 ---LPPQLSSLVRLKQFSV--AYNCLS 166 (538)
Q Consensus 145 ---~p~~l~~l~~L~~l~l--~~N~l~ 166 (538)
+-..+...++|+.++| ++|.+.
T Consensus 91 ~~~l~~~l~~~~~L~~l~L~l~~n~i~ 117 (166)
T d1io0a_ 91 ILALVEALQSNTSLIELRIDNQSQPLG 117 (166)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCccccEEeeccCCCcCc
Confidence 2245667788887555 456664
|