Citrus Sinensis ID: 040415

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MASLHYVCSLLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAWIRND
cccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccccccccccccEEEEEEEEEcccccEEEcccHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEccccccccEEEccccccccccccccccccccccccHHHHHHcccccccEEEEEcccEEEEEEEccEEEEEccHHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHcc
cccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccEEEEEEEcccccccEEcccccccHHHHHHHHHHHccccccEEEEEEEcHHHcHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHccccHHHHHHHHcHHEEEEEcccccccccccccccccccccccccHHHHHHHHHHccccHHHEEEEccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHccccEEEEcccccccEEEcccEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccccccc
MASLHYVCSLLSILVCLITIAatghitaspppvkaaywpswaesfppsaintnLFTHIYYAFlmpnnvtykfnidnstaiqlsnftttlhhknppvktlfsiggagadtsifvdmashprsrqAFIHSSIEVARKFgfdgldldwefpqnpkemhdLGLLLDEWRLALEREAkatcqppllFTAAVYFSVDFFVAdvyrkypvgsinrnLDWINAMCFdyhggwdntttgahaalydpksnlstsygLKSWLRAgvhrsklvmglplygrswklkdpnsheigspavdvgpgdkgLMQFVQVGefnrmngaTVVYDVESvsaysfagstwigyddeiSATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAWIRND
MASLHYVCSLLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIgspavdvgpgdKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAWIRND
MASLHYVCSLLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAWIRND
***LHYVCSLLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLK***********VDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAWI***
****HYVCSLLSILVCLITIAATGH*TASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARA*I***
MASLHYVCSLLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAWIRND
*ASLHYVCSLLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQ*A*******
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASLHYVCSLLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAWIRND
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query379 2.2.26 [Sep-21-2011]
Q6RY07473 Acidic mammalian chitinas yes no 0.841 0.674 0.334 2e-43
Q91XA9473 Acidic mammalian chitinas yes no 0.841 0.674 0.328 5e-43
Q9BZP6476 Acidic mammalian chitinas yes no 0.841 0.670 0.331 9e-43
Q95M17472 Acidic mammalian chitinas yes no 0.844 0.677 0.326 7e-42
Q13231466 Chitotriosidase-1 OS=Homo no no 0.836 0.680 0.32 5e-41
Q91Z98402 Chitinase-3-like protein no no 0.839 0.791 0.316 1e-39
O35744398 Chitinase-3-like protein no no 0.839 0.798 0.324 1e-39
Q29411383 Chitinase-3-like protein no no 0.820 0.812 0.334 3e-38
P29030 504 Endochitinase OS=Brugia m N/A no 0.894 0.672 0.295 1e-37
Q8SPQ0383 Chitinase-3-like protein N/A no 0.862 0.853 0.328 2e-37
>sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 Back     alignment and function desciption
 Score =  177 bits (448), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 31/350 (8%)

Query: 36  AYWPSWAE------SFPPSAINTNLFTHIYYAFL-MPNNVTYKFNIDNSTAIQLSNFTTT 88
            Y+ +WA+      SF P  IN  L TH+ YAF  M NN       ++ T  +  N    
Sbjct: 26  CYFTNWAQYRPGLGSFKPDDINPCLCTHLIYAFAGMQNNQITTIEWNDVTLYKAFN---D 82

Query: 89  LHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFP 148
           L ++N  +KTL +IGG    T+ F  M S  ++RQ FI S I+  R++GFDGLDLDWE+P
Sbjct: 83  LKNRNSKLKTLLAIGGWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDWEYP 142

Query: 149 QN----PKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVG 204
            +    P++ H   +L+ E R A E+EA  + +P L+ TAAV       ++++   Y + 
Sbjct: 143 GSRGSPPQDKHLFTVLVKELREAFEQEAIESNRPRLMVTAAVAAG----ISNIQAGYEIP 198

Query: 205 SINRNLDWINAMCFDYHGGWDNTTTGAHAALY----DPKSN--LSTSYGLKSWLRAGVHR 258
            +++ LD+I+ M +D HG WD   TG ++ LY    +  SN  L+  Y +  W   G   
Sbjct: 199 ELSQYLDFIHVMTYDLHGSWDG-YTGENSPLYKLPTETGSNAYLNVDYVMNYWKDNGAPA 257

Query: 259 SKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPG-----DKGLMQFVQVGEFNRMNGATV 313
            KL++G P YG ++ L +P+   IG+P    GP        G   + ++  F R NGAT 
Sbjct: 258 EKLIVGFPEYGHTYILSNPSDTGIGAPTSGNGPAGPYTRQAGFWAYYEICTFLR-NGATQ 316

Query: 314 VYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDN 363
            +D      Y++ G+ W+GYD+  S ++K  + +     G   WA+  D+
Sbjct: 317 DWDAPQEVPYAYKGNEWVGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDD 366
Degrades chitin and chitotriose. May participate in the defense against nematodes, fungi and other pathogens. Plays a role in T-helper cell type 2 (Th2) immune response. Contributes to the response to IL-13 and inflammation in response to IL-13. Stimulates chemokine production by pulmonary epithelial cells. Protects lung epithelial cells against apoptosis and promotes phosphorylation of AKT1. Its function in the inflammatory response and in protecting cells against apoptosis is inhibited by allosamidin, suggesting that the function of this protein depends on carbohydrate binding.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 Back     alignment and function description
>sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 Back     alignment and function description
>sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 Back     alignment and function description
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 Back     alignment and function description
>sp|Q91Z98|CH3L4_MOUSE Chitinase-3-like protein 4 OS=Mus musculus GN=Chi3l4 PE=1 SV=2 Back     alignment and function description
>sp|O35744|CH3L3_MOUSE Chitinase-3-like protein 3 OS=Mus musculus GN=Chi3l3 PE=1 SV=2 Back     alignment and function description
>sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|P29030|CHIT_BRUMA Endochitinase OS=Brugia malayi PE=1 SV=1 Back     alignment and function description
>sp|Q8SPQ0|CH3L1_CAPHI Chitinase-3-like protein 1 OS=Capra hircus GN=CHI3L1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
296084602373 unnamed protein product [Vitis vinifera] 0.957 0.973 0.655 1e-141
147787797373 hypothetical protein VITISV_036052 [Viti 0.947 0.962 0.660 1e-139
224142433380 predicted protein [Populus trichocarpa] 0.934 0.931 0.646 1e-139
225462982420 PREDICTED: acidic mammalian chitinase-li 0.944 0.852 0.659 1e-138
255565057377 chitinase, putative [Ricinus communis] g 0.978 0.984 0.635 1e-138
449457929378 PREDICTED: acidic mammalian chitinase-li 0.973 0.976 0.582 1e-130
147787798 618 hypothetical protein VITISV_036053 [Viti 0.912 0.559 0.534 1e-106
359484767 717 PREDICTED: probable chitinase 3-like [Vi 0.912 0.482 0.534 1e-106
296084601357 unnamed protein product [Vitis vinifera] 0.928 0.985 0.531 1e-105
356565125366 PREDICTED: acidic mammalian chitinase-li 0.947 0.980 0.548 1e-103
>gi|296084602|emb|CBI25623.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 240/366 (65%), Positives = 288/366 (78%), Gaps = 3/366 (0%)

Query: 10  LLSILVCLITIAATGHITASPPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVT 69
            LS+ V L  IA T  +TASPP VK AYWPSW ESFPPSAI+T+LFTH+YYAF  PNNVT
Sbjct: 9   FLSVFV-LYAIAMT-CVTASPP-VKGAYWPSWDESFPPSAIDTSLFTHVYYAFASPNNVT 65

Query: 70  YKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSS 129
           +KF+I NST I L +FT+TLH K P +K L SIGG G D  +F  MAS   +R +FI S+
Sbjct: 66  FKFDISNSTGISLLDFTSTLHRKKPSLKALLSIGGGGGDQQLFARMASKASTRASFIKST 125

Query: 130 IEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFS 189
           +EVARK+GFDGLDLDWEFP++PKEM D GLLL EWR  +++EAK   + PLL TAA YFS
Sbjct: 126 VEVARKYGFDGLDLDWEFPESPKEMEDWGLLLQEWRAEVKKEAKLKGRAPLLITAATYFS 185

Query: 190 VDFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLK 249
           VDFF    YRKY VGS  +NLD IN MC+DY G WD + TGA AAL+DP SN+STSYG+K
Sbjct: 186 VDFFAYGDYRKYQVGSAGKNLDLINLMCYDYRGSWDTSATGAQAALFDPNSNISTSYGVK 245

Query: 250 SWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMN 309
           SW++AGV RSKLVMGLPLYGR+WKLKDP  H IG+PAVDVGPGD+G++ F QV  FN+ N
Sbjct: 246 SWIKAGVPRSKLVMGLPLYGRTWKLKDPTQHGIGAPAVDVGPGDEGVLSFSQVEAFNKEN 305

Query: 310 GATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKIST 369
            ATVVYD  +VS YS+AG++WIGYDD  S T+KIGFA+ALGLRGYFFWA++ D++WKIS 
Sbjct: 306 KATVVYDARTVSTYSYAGTSWIGYDDTRSTTVKIGFARALGLRGYFFWAVNDDSKWKISR 365

Query: 370 QVARAW 375
           Q ++AW
Sbjct: 366 QASKAW 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147787797|emb|CAN60685.1| hypothetical protein VITISV_036052 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142433|ref|XP_002324562.1| predicted protein [Populus trichocarpa] gi|222865996|gb|EEF03127.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225462982|ref|XP_002263830.1| PREDICTED: acidic mammalian chitinase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255565057|ref|XP_002523521.1| chitinase, putative [Ricinus communis] gi|223537228|gb|EEF38860.1| chitinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449457929|ref|XP_004146700.1| PREDICTED: acidic mammalian chitinase-like [Cucumis sativus] gi|449527432|ref|XP_004170715.1| PREDICTED: acidic mammalian chitinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147787798|emb|CAN60686.1| hypothetical protein VITISV_036053 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484767|ref|XP_002263220.2| PREDICTED: probable chitinase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296084601|emb|CBI25622.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356565125|ref|XP_003550795.1| PREDICTED: acidic mammalian chitinase-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
TAIR|locus:2134025379 ChiC "class V chitinase" [Arab 0.941 0.941 0.413 2.5e-72
TAIR|locus:2134015398 AT4G19800 [Arabidopsis thalian 0.865 0.824 0.434 9.2e-68
TAIR|locus:2134030366 AT4G19820 [Arabidopsis thalian 0.873 0.904 0.394 8.8e-63
TAIR|locus:2133940362 AT4G19750 [Arabidopsis thalian 0.857 0.897 0.395 1.5e-60
TAIR|locus:2133955369 AT4G19760 [Arabidopsis thalian 0.886 0.910 0.389 8.1e-60
TAIR|locus:2134010363 AT4G19720 [Arabidopsis thalian 0.860 0.898 0.390 7.5e-57
TAIR|locus:2134020332 AT4G19730 [Arabidopsis thalian 0.823 0.939 0.372 4.2e-47
TAIR|locus:2133970261 AT4G19770 [Arabidopsis thalian 0.656 0.954 0.412 8.8e-47
UNIPROTKB|E1BZP3473 CHIA "Uncharacterized protein" 0.849 0.680 0.334 1.3e-45
UNIPROTKB|E1BZP6480 CHIA "Uncharacterized protein" 0.849 0.670 0.334 1.3e-45
TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
 Identities = 153/370 (41%), Positives = 223/370 (60%)

Query:    10 LLSILVCLITIAATGHITASPPPVKAAYW-PSWAESFPPSAINTNLFTHIYYAFLMPNNV 68
             L+S++V  IT   T   + +   VKA+YW P  A  FP + I+++LFTH++ AF   N+ 
Sbjct:     6 LISLIVS-ITFFLTLQCSMAQTVVKASYWFP--ASEFPVTDIDSSLFTHLFCAFADLNSQ 62

Query:    69 TYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHS 128
             T +  + ++   + S FT T+  +NP VKTL SIGG  AD + +  MAS+P SR++FI S
Sbjct:    63 TNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDS 122

Query:   129 SIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYF 188
             SI VAR +GF GLDLDWE+P +  EM + G LL EWR A+  EA ++ +P LL  AAV++
Sbjct:   123 SIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFY 182

Query:   189 SVDFFVADVYRKYPVGSINRNLDWINAMCFDYHG-GWDNTTTGAHAALYDPKSNLSTS-- 245
             S +++       YPV ++  +LDW+N M +D++G GW   T G  AAL+DP SN   S  
Sbjct:   183 SNNYYSV----LYPVSAVASSLDWVNLMAYDFYGPGWSRVT-GPPAALFDP-SNAGPSGD 236

Query:   246 YGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEF 305
              G +SW++AG+   K V+G P YG +W+L + NSH   +P         G + + Q+ +F
Sbjct:   237 AGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKF 296

Query:   306 NRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEW 365
                NGAT VY+   V  Y +AG+ WIGYDD  S   K+ +A+  GL GYF W +  D+  
Sbjct:   297 IVDNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNS 356

Query:   366 KISTQVARAW 375
              +S   ++AW
Sbjct:   357 GLSRAASQAW 366
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0004568 "chitinase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0006032 "chitin catabolic process" evidence=IDA
GO:0008843 "endochitinase activity" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0035885 "exochitinase activity" evidence=IDA
TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BZP3 CHIA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BZP6 CHIA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.14LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_XVIII000975
hypothetical protein (380 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
cd02879299 cd02879, GH18_plant_chitinase_class_V, The class V 1e-151
smart00636334 smart00636, Glyco_18, Glyco_18 domain 5e-90
cd02872362 cd02872, GH18_chitolectin_chitotriosidase, This co 2e-81
pfam00704325 pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam 3e-79
cd06548322 cd06548, GH18_chitinase, The GH18 (glycosyl hydrol 8e-60
COG3325441 COG3325, ChiA, Chitinase [Carbohydrate transport a 5e-40
cd02873413 cd02873, GH18_IDGF, The IDGF's (imaginal disc grow 7e-32
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 2e-30
cd02878345 cd02878, GH18_zymocin_alpha, Zymocin, alpha subuni 2e-21
cd06545253 cd06545, GH18_3CO4_chitinase, The Bacteroides thet 1e-15
cd02874313 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm 1e-14
COG3858423 COG3858, COG3858, Predicted glycosyl hydrolase [Ge 6e-07
cd02875358 cd02875, GH18_chitobiase, Chitobiase (also known a 2e-06
cd02871312 cd02871, GH18_chitinase_D-like, GH18 domain of Chi 6e-05
>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
 Score =  428 bits (1102), Expect = e-151
 Identities = 167/339 (49%), Positives = 221/339 (65%), Gaps = 40/339 (11%)

Query: 30  PPPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTL 89
              VK  YWP+W+E FPPS I+++LFTH++YAF   +  TY+  I  S   + S FT T+
Sbjct: 1   STIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETV 60

Query: 90  HHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQ 149
             KNP VKTL SIGG G+D+S F  MAS P +R+AFI+SSI+VARK+GFDGLDLDWEFP 
Sbjct: 61  KRKNPSVKTLLSIGGGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPS 120

Query: 150 NPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRN 209
           +  EM + G LL+EWR A++ EA+++ +PPLL TAAVYFS   F++D    YP+ +IN+N
Sbjct: 121 SQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSPILFLSDDSVSYPIEAINKN 180

Query: 210 LDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYG 269
           LDW+N M +DY+G W++ TTG  AALYDP SN+ST YG+KSW++AGV   KLV+GLPLYG
Sbjct: 181 LDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYG 240

Query: 270 RSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGST 329
           R+W L                                        YD  +VS+Y +AG+T
Sbjct: 241 RAWTL----------------------------------------YDTTTVSSYVYAGTT 260

Query: 330 WIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKIS 368
           WIGYDD  S  +K+ +A+  GL GYF WA+ YD+   +S
Sbjct: 261 WIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299
>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain Back     alignment and domain information
>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 Back     alignment and domain information
>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119357 cd02878, GH18_zymocin_alpha, Zymocin, alpha subunit Back     alignment and domain information
>gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>gnl|CDD|119354 cd02875, GH18_chitobiase, Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>gnl|CDD|119350 cd02871, GH18_chitinase_D-like, GH18 domain of Chitinase D (ChiD) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 379
cd02879299 GH18_plant_chitinase_class_V The class V plant chi 100.0
cd02872362 GH18_chitolectin_chitotriosidase This conserved do 100.0
cd02873413 GH18_IDGF The IDGF's (imaginal disc growth factors 100.0
smart00636334 Glyco_18 Glycosyl hydrolase family 18. 100.0
cd02878345 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin 100.0
cd06548322 GH18_chitinase The GH18 (glycosyl hydrolases, fami 100.0
COG3325441 ChiA Chitinase [Carbohydrate transport and metabol 100.0
KOG2806432 consensus Chitinase [Carbohydrate transport and me 100.0
PF00704343 Glyco_hydro_18: Glycosyl hydrolases family 18; Int 100.0
cd02876318 GH18_SI-CLP Stabilin-1 interacting chitinase-like 100.0
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 100.0
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 100.0
cd06549298 GH18_trifunctional GH18 domain of an uncharacteriz 100.0
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 100.0
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 100.0
COG3858423 Predicted glycosyl hydrolase [General function pre 100.0
cd06546256 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 100.0
KOG2091392 consensus Predicted member of glycosyl hydrolase f 100.0
cd06544253 GH18_narbonin Narbonin is a plant 2S protein from 100.0
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 99.97
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 99.94
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 99.92
cd06543294 GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch 99.85
COG3469332 Chitinase [Carbohydrate transport and metabolism] 99.78
KOG4701 568 consensus Chitinase [Cell wall/membrane/envelope b 99.58
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 98.5
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.98
PF03644311 Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int 97.79
PF13200316 DUF4015: Putative glycosyl hydrolase domain 97.71
PF11340181 DUF3142: Protein of unknown function (DUF3142); In 97.62
KOG2331 526 consensus Predicted glycosylhydrolase [General fun 95.34
COG1306400 Uncharacterized conserved protein [Function unknow 90.64
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 88.57
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 88.41
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 88.29
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 88.16
PF14883294 GHL13: Hypothetical glycosyl hydrolase family 13 87.06
PRK12313633 glycogen branching enzyme; Provisional 86.5
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 85.79
COG1649418 Uncharacterized protein conserved in bacteria [Fun 85.78
PRK12568730 glycogen branching enzyme; Provisional 85.01
PRK05402726 glycogen branching enzyme; Provisional 83.15
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 83.12
PRK14706639 glycogen branching enzyme; Provisional 82.59
PLN02960897 alpha-amylase 81.59
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 81.44
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
Probab=100.00  E-value=2.6e-67  Score=485.69  Aligned_cols=297  Identities=56%  Similarity=1.058  Sum_probs=266.9

Q ss_pred             CCeEEEEecCCCCCCCCCCCCCCCCcEEEEEEEeeeCCCcEEEeCCcchHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCc
Q 040415           31 PPVKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTS  110 (379)
Q Consensus        31 ~~~~~gy~~~w~~~~~~~~~~~~~~t~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~  110 (379)
                      +-+++|||++|...+.+++++..+||||+|+|+.++++++.+...+.....+..+.+.+|+++|++|+++|||||+.++.
T Consensus         2 ~~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~lkvlisiGG~~~~s~   81 (299)
T cd02879           2 TIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETVKRKNPSVKTLLSIGGGGSDSS   81 (299)
T ss_pred             CeEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeeccccHHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCc
Confidence            35789999999889999999999999999999999987778877766666778888889999999999999999987678


Q ss_pred             chhhhhCCHHHHHHHHHHHHHHHHhcCCCEEEEeecCCCCCcccchHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccc
Q 040415          111 IFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSV  190 (379)
Q Consensus       111 ~~~~~~~~~~~r~~f~~~i~~~l~~~g~DGidiD~E~~~~~~~~~~~~~fl~~l~~~l~~~~~~~~~~~~~ls~a~~~~~  190 (379)
                      .|+.++++++.|++|++++++++++|||||||||||+|..++|+.+|+.||++||++|+++++.+++++++||+++++.+
T Consensus        82 ~fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~~l~~~~~~~~~~~~~ls~av~~~~  161 (299)
T cd02879          82 AFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSP  161 (299)
T ss_pred             hhhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcEEEEeecccch
Confidence            99999999999999999999999999999999999999877899999999999999999887777777899999998755


Q ss_pred             ccccccccCCcChhhhhhcCcEEEeecccccCCCCCCCCCCCcccCCCCCCccHHHHHHHHHHcCCCCCCeeeecccccc
Q 040415          191 DFFVADVYRKYPVGSINRNLDWINAMCFDYHGGWDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGR  270 (379)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~~vD~v~lm~Yd~~~~~~~~~~~~~spl~~~~~~~~i~~~v~~~~~~gv~~~Kl~lglp~yG~  270 (379)
                      ..........|++++|.++||+|++|+||+||+|....++|++||+.+....+++.+|+.|++.|+|++||+||||+|||
T Consensus       162 ~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~~~~~~~~~~a~l~~~~~~~~~~~~v~~~~~~g~p~~KlvlGvp~YGr  241 (299)
T cd02879         162 ILFLSDDSVSYPIEAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYGR  241 (299)
T ss_pred             hhccccccccCCHHHHHhhCCEEEEEeecccCCCCCCCCCCCCcCCCCCCCCCHHHHHHHHHHcCCCHHHEEEEeccccc
Confidence            42101124568999999999999999999999998557899999998777789999999999999999999999999999


Q ss_pred             ceeccCCCCCCCCCCCCCCCCCCCccccHHHHHHhhhcCCcEEEEecCceeEEEEeCCEEEEECCHHHHHHHHHHHHHcC
Q 040415          271 SWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALG  350 (379)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~i~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y~d~~Sl~~K~~~~~~~g  350 (379)
                      .|++                                        ||+.++++|.+.+++||+|||++|++.|++||+++|
T Consensus       242 ~~~~----------------------------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~K~~~a~~~~  281 (299)
T cd02879         242 AWTL----------------------------------------YDTTTVSSYVYAGTTWIGYDDVQSIAVKVKYAKQKG  281 (299)
T ss_pred             cccc----------------------------------------cCCCcceEEEEECCEEEEeCCHHHHHHHHHHHHhCC
Confidence            9952                                        788889999999999999999999999999999999


Q ss_pred             CceEEEeeccCCCcccH
Q 040415          351 LRGYFFWALSYDNEWKI  367 (379)
Q Consensus       351 l~Gv~iW~l~~Dd~~~l  367 (379)
                      |||+|+|++++||...|
T Consensus       282 lgGv~~W~l~~Dd~~~~  298 (299)
T cd02879         282 LLGYFAWAVGYDDNNWL  298 (299)
T ss_pred             CCeEEEEEeecCCcccc
Confidence            99999999999986654

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>smart00636 Glyco_18 Glycosyl hydrolase family 18 Back     alignment and domain information
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit Back     alignment and domain information
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>COG3858 Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain Back     alignment and domain information
>COG3469 Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function Back     alignment and domain information
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] Back     alignment and domain information
>COG1306 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
3aqu_A356 Crystal Structure Of A Class V Chitinase From Arabi 4e-74
3alf_A353 Crystal Structure Of Class V Chitinase From Nicotia 3e-68
3alg_A353 Crystal Structure Of Class V Chitinase (E115q Mutan 6e-68
3fxy_A395 Acidic Mammalian Chinase, Catalytic Domain Length = 5e-45
2ybt_A381 Crystal Structure Of Human Acidic Chitinase In Comp 5e-45
1hkk_A364 High Resoultion Crystal Structure Of Human Chitinas 2e-42
1hki_A365 Crystal Structure Of Human Chitinase In Complex Wit 2e-42
1lg1_A365 Crystal Structure Of Human Chitotriosidase In Compl 2e-42
1guv_A366 Structure Of Human Chitotriosidase Length = 366 2e-42
1waw_A445 Specificity And Affinity Of Natural Product Cyclope 4e-42
1e9l_A377 The Crystal Structure Of Novel Mammalian Lectin Ym1 1e-40
1zbv_A361 Crystal Structure Of The Goat Signalling Protein (S 1e-38
2esc_A361 Crystal Structure Of A 40 Kda Protective Signalling 2e-38
2pi6_A361 Crystal Structure Of The Sheep Signalling Glycoprot 4e-38
1sr0_A361 Crystal Structure Of Signalling Protein From Sheep( 5e-38
1owq_A361 Crystal Structure Of A 40 Kda Signalling Protein (S 7e-38
1xhg_A361 Crystal Structure Of A 40 Kda Signalling Protein Fr 9e-38
1syt_A361 Crystal Structure Of Signalling Protein From Goat S 9e-38
1hjv_A362 Crystal Structure Of Hcgp-39 In Complex With Chitin 1e-37
1ljy_A361 Crystal Structure Of A Novel Regulatory 40 Kda Mamm 2e-37
1tfv_A361 Crystal Structure Of A Buffalo Signaling Glycoprote 5e-37
4ay1_A365 Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch 1e-35
3g6l_A406 The Crystal Structure Of A Chitinase Crchi1 From Th 6e-27
1itx_A419 Catalytic Domain Of Chitinase A1 From Bacillus Circ 7e-27
1w9p_A433 Specificity And Affinity Of Natural Product Cyclope 2e-25
1wno_A395 Crystal Structure Of A Native Chitinase From Asperg 4e-25
1d2k_A392 C. Immitis Chitinase 1 At 2.2 Angstroms Resolution 1e-23
1ll7_A392 Structure Of The E171q Mutant Of C. Immitis Chitina 3e-23
1ll6_A392 Structure Of The D169n Mutant Of C. Immitis Chitina 4e-23
1e6z_A498 Chitinase B From Serratia Marcescens Wildtype In Co 5e-20
1e15_A499 Chitinase B From Serratia Marcescens Length = 499 5e-20
1h0g_A499 Complex Of A Chitinase With The Natural Product Cyc 5e-20
1e6n_B499 Chitinase B From Serratia Marcescens Inactive Mutan 1e-19
1ur9_A499 Interactions Of A Family 18 Chitinase With The Desi 2e-19
1ogb_A499 Chitinase B From Serratia Marcescens Mutant D142n L 2e-19
1goi_A499 Crystal Structure Of The D140n Mutant Of Chitinase 2e-19
3ars_A584 Crystal Structure Analysis Of Chitinase A From Vibr 2e-18
3b8s_A584 Crystal Structure Of Wild-Type Chitinase A From Vib 2e-17
1kfw_A435 Structure Of Catalytic Domain Of Psychrophilic Chit 5e-17
1jnd_A420 Crystal Structure Of Imaginal Disc Growth Factor-2 2e-16
3b9a_A584 Crystal Structure Of Vibrio Harveyi Chitinase A Com 2e-16
1ffr_A540 Crystal Structure Of Chitinase A Mutant Y390f Compl 7e-16
1ctn_A540 Crystal Structure Of A Bacterial Chitinase At 2.3 A 1e-15
1edq_A540 Crystal Structure Of Chitinase A From S. Marcescens 2e-15
1ehn_A540 Crystal Structure Of Chitinase A Mutant E315q Compl 4e-15
2wly_A548 Chitinase A From Serratia Marcescens Atcc990 In Com 4e-15
1rd6_A563 Crystal Structure Of S. Marcescens Chitinase A Muta 4e-15
2wk2_A540 Chitinase A From Serratia Marcescens Atcc990 In Com 4e-15
1eib_A540 Crystal Structure Of Chitinase A Mutant D313a Compl 1e-14
1k9t_A540 Chitinase A Complexed With Tetra-N-Acetylchitotrios 1e-14
1nh6_A540 Structure Of S. Marcescens Chitinase A, E315l, Comp 6e-14
3qok_A420 Crystal Structure Of Putative Chitinase Ii From Kle 2e-13
4dws_A546 Crystal Structure Of A Chitinase From The Yersinia 2e-04
4dws_D546 Crystal Structure Of A Chitinase From The Yersinia 2e-04
4dws_C546 Crystal Structure Of A Chitinase From The Yersinia 6e-04
4dws_B546 Crystal Structure Of A Chitinase From The Yersinia 7e-04
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  275 bits (702), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/346 (41%), Positives = 211/346 (60%), Gaps = 10/346 (2%)
Query: 33  VKAAYW-PSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHH 91
           VKA+YW P  A  FP + I+++LFTH++ AF   N+ T +  + ++   + S FT T+  
Sbjct: 5   VKASYWFP--ASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQR 62
Query: 92  KNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNP 151
           +NP VKTL SIGG  AD + +  MAS+P SR++FI SSI VAR +GF GLDLDWE+P + 
Sbjct: 63  RNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSA 122
Query: 152 KEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLD 211
            EM + G LL EWR A+  EA ++ +P LL  AAV++S +++       YPV ++  +LD
Sbjct: 123 TEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSV----LYPVSAVASSLD 178
Query: 212 WINAMCFDYHG-GWDNTTTGAHAALYDP-KSNLSTSYGLKSWLRAGVHRSKLVMGLPLYG 269
           W+N M +D++G GW    TG  AAL+DP  +  S   G +SW++AG+   K V+G P YG
Sbjct: 179 WVNLMAYDFYGPGWSR-VTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYG 237
Query: 270 RSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGST 329
            +W+L + NSH   +P         G + + Q+ +F   NGAT VY+   V  Y +AG+ 
Sbjct: 238 YAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNGATTVYNSTVVGDYCYAGTN 297
Query: 330 WIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAW 375
           WIGYDD  S   K+ +A+  GL GYF W +  D+   +S   ++AW
Sbjct: 298 WIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQAW 343
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 Back     alignment and structure
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 Back     alignment and structure
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 Back     alignment and structure
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 Back     alignment and structure
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 Back     alignment and structure
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 Back     alignment and structure
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 Back     alignment and structure
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 Back     alignment and structure
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 Back     alignment and structure
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 Back     alignment and structure
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 Back     alignment and structure
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 Back     alignment and structure
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 Back     alignment and structure
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 Back     alignment and structure
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 Back     alignment and structure
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 Back     alignment and structure
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 Back     alignment and structure
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 Back     alignment and structure
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 Back     alignment and structure
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 Back     alignment and structure
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 Back     alignment and structure
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 Back     alignment and structure
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 Back     alignment and structure
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 Back     alignment and structure
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 Back     alignment and structure
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 Back     alignment and structure
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 Back     alignment and structure
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 Back     alignment and structure
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 Back     alignment and structure
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 Back     alignment and structure
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 Back     alignment and structure
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 Back     alignment and structure
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B From Arthrobacter Tad20 Length = 435 Back     alignment and structure
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 Back     alignment and structure
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 Back     alignment and structure
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 Back     alignment and structure
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 Back     alignment and structure
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 Back     alignment and structure
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 Back     alignment and structure
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 Back     alignment and structure
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 Back     alignment and structure
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 Back     alignment and structure
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 Back     alignment and structure
>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 Back     alignment and structure
>pdb|4DWS|A Chain A, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure
>pdb|4DWS|D Chain D, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure
>pdb|4DWS|C Chain C, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure
>pdb|4DWS|B Chain B, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 1e-134
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 1e-132
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 1e-111
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 1e-110
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 1e-109
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 1e-108
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 1e-104
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 1e-88
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 2e-87
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 7e-87
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 2e-77
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 8e-77
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 1e-76
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 2e-75
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 5e-75
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 7e-74
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 2e-70
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 3e-70
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 3e-69
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 3e-58
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 2e-52
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 6e-43
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 1e-29
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 3e-28
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 8e-24
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 3e-21
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 5e-21
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 3e-20
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 2e-16
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 7e-12
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 1e-11
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 8e-04
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 8e-04
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 Back     alignment and structure
 Score =  388 bits (998), Expect = e-134
 Identities = 136/347 (39%), Positives = 202/347 (58%), Gaps = 9/347 (2%)

Query: 33  VKAAYWPSWAESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHK 92
           VK  YW   +     + I++ LFTH++ AF   N    +  I          FT+T+  K
Sbjct: 4   VKGGYWFKDS-GLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRK 62

Query: 93  NPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPK 152
           NP VKT  SI G  A+++ +  MA  P SR++FI SSI +AR+ GF GLDLDWE+P +  
Sbjct: 63  NPSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAA 122

Query: 153 EMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRNLDW 212
           +M +LG LL+EWR A+  EA+ + +  LL TAAV  S           YPV S+ RNLDW
Sbjct: 123 DMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRV----NGLNYPVESLARNLDW 178

Query: 213 INAMCFDYHGG-WDNTTTGAHAALYDPKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRS 271
           IN M +D++G  W  + T +HA L+DP +++S S G+ +W++AGV   KLV+G+P YG +
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYA 238

Query: 272 WKLKDPNSHEIGSPAV---DVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGS 328
           W+L + N H + +PA    +VG  D G M + ++ ++   + AT VY+   V  Y ++GS
Sbjct: 239 WRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRATTVYNATIVGDYCYSGS 298

Query: 329 TWIGYDDEISATIKIGFAQALGLRGYFFWALSYDNEWKISTQVARAW 375
            WI YDD  +   K+ + +  GL GYF W ++ D  W +S   ++ W
Sbjct: 299 NWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQTW 345
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Length = 289 Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Length = 311 Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Length = 451 Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Length = 294 Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Length = 273 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 100.0
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 100.0
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 100.0
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 100.0
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 100.0
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 100.0
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 100.0
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 100.0
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 100.0
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 100.0
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 100.0
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 100.0
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 100.0
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 100.0
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 100.0
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 100.0
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 100.0
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 100.0
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 100.0
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 100.0
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 100.0
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 100.0
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 100.0
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 100.0
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 100.0
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 100.0
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 100.0
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 100.0
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 100.0
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 100.0
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 99.97
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 99.97
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 99.97
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 99.96
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 99.96
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 99.95
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 99.95
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 99.92
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 99.89
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 99.85
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 99.8
2vtf_A 626 Endo-beta-N-acetylglucosaminidase; hydrolase, fami 97.63
2w91_A 653 Endo-beta-N-acetylglucosaminidase D; hydrolase, N- 97.55
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 91.71
3vmn_A 643 Dextranase; TIM barrel, immunoglobrin fold, greek- 90.75
2aam_A309 Hypothetical protein TM1410; structural genomics, 87.03
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 85.69
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 84.84
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 83.2
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 82.21
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 81.0
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 80.4
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 80.06
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=2.2e-75  Score=552.89  Aligned_cols=340  Identities=42%  Similarity=0.808  Sum_probs=315.3

Q ss_pred             CCeEEEEecCC-CCCCCCCCCCCCCCcEEEEEEEeeeCCCcEEEeCCcchHHHHHHHHHHhhcCCCCeEEEEEcCCCCCC
Q 040415           31 PPVKAAYWPSW-AESFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTLHHKNPPVKTLFSIGGAGADT  109 (379)
Q Consensus        31 ~~~~~gy~~~w-~~~~~~~~~~~~~~t~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~  109 (379)
                      ..+++|||  | ...+.+++++..+||||+|+|+.++++++.+.+.+..+..+.++++.+|+++|++|+++|||||+.++
T Consensus         3 ~~~~~gY~--~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGGw~~~~   80 (356)
T 3aqu_A            3 TVVKASYW--FPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADK   80 (356)
T ss_dssp             CCEEEEEE--CGGGCCCGGGSCGGGCSEEEEEEEEEETTTTEEECCTTTHHHHHHHHHHHTTTCTTCEEEEEEECTTSCH
T ss_pred             ceEEEEEE--eCCCCCCHHHCCcccCCEEEEEEEEecCCCCEEEeCCccHHHHHHHHHHHHhhCCCceEEEEECCCCCCc
Confidence            46889999  7 67899999999999999999999998877888877666778888888999999999999999998667


Q ss_pred             cchhhhhCCHHHHHHHHHHHHHHHHhcCCCEEEEeecCCCCCcccchHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Q 040415          110 SIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFPQNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFS  189 (379)
Q Consensus       110 ~~~~~~~~~~~~r~~f~~~i~~~l~~~g~DGidiD~E~~~~~~~~~~~~~fl~~l~~~l~~~~~~~~~~~~~ls~a~~~~  189 (379)
                      ..|+.++++++.|++|++++++++++|||||||||||+|..++|+.+|+.||++||++|+++++.+++++++||+++|+.
T Consensus        81 ~~f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~g~~~~~Ls~av~~~  160 (356)
T 3aqu_A           81 TAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYS  160 (356)
T ss_dssp             HHHHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEEESS
T ss_pred             chHHHHhcCHHHHHHHHHHHHHHHHHhCCCeEEEEEeecCChhHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEeccCC
Confidence            89999999999999999999999999999999999999977789999999999999999998888888789999999975


Q ss_pred             cccccccccCCcChhhhhhcCcEEEeecccccCC-CCCCCCCCCcccCCCCC-CccHHHHHHHHHHcCCCCCCeeeeccc
Q 040415          190 VDFFVADVYRKYPVGSINRNLDWINAMCFDYHGG-WDNTTTGAHAALYDPKS-NLSTSYGLKSWLRAGVHRSKLVMGLPL  267 (379)
Q Consensus       190 ~~~~~~~~~~~~~~~~l~~~vD~v~lm~Yd~~~~-~~~~~~~~~spl~~~~~-~~~i~~~v~~~~~~gv~~~Kl~lglp~  267 (379)
                      +..    ....|++++|.+++|+|+||+||+|++ |+ ..++|++||+++.. ..+++.+|+.|++.|+|++||+||||+
T Consensus       161 ~~~----~~~~~d~~~l~~~vD~inlMtYD~~g~~w~-~~~g~~apl~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~  235 (356)
T 3aqu_A          161 NNY----YSVLYPVSAVASSLDWVNLMAYDFYGPGWS-RVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPY  235 (356)
T ss_dssp             SEE----TTEECCHHHHHHHCSEEEEECCCCCCTTTC-SBCCCTTCSCCTTCSSCCHHHHHHHHHHTTCCGGGEEEEEES
T ss_pred             chh----hhccCCHHHHhhhccEEEEEeeecccCCCC-CCcCCCCcCCCCCCCCccHHHHHHHHHHcCCCHHHEEEEecc
Confidence            544    235689999999999999999999999 98 78999999986654 578999999999999999999999999


Q ss_pred             cccceeccCCCCCCCCCCCCCCCCCCCccccHHHHHHhhhcCCcEEEEecCceeEEEEeCCEEEEECCHHHHHHHHHHHH
Q 040415          268 YGRSWKLKDPNSHEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQ  347 (379)
Q Consensus       268 yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~i~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y~d~~Sl~~K~~~~~  347 (379)
                      |||+|++.++.++++++|..|+++.++|.++|.|||+++++++++..||++++++|.|++++||+|||++|+++|++||+
T Consensus       236 YGr~~~~~~~~~~~~~~p~~g~~~~~~g~~~y~ei~~~l~~~g~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~  315 (356)
T 3aqu_A          236 YGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAK  315 (356)
T ss_dssp             EEEEEEESCTTCCSTTCBEEEECSSTTCEEEHHHHHHHHHHHTCEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHH
T ss_pred             ceeeeEecCCcCCCCCCCCCCCCCCCCCeeeHHHHHHHHhcCCCeEEEchhhceEEEEeCCEEEEeCCHHHHHHHHHHHH
Confidence            99999999999999999999988888899999999999988899999999999999999999999999999999999999


Q ss_pred             HcCCceEEEeeccCCCcccHHHHHHHhccc
Q 040415          348 ALGLRGYFFWALSYDNEWKISTQVARAWIR  377 (379)
Q Consensus       348 ~~gl~Gv~iW~l~~Dd~~~l~~a~~~~~~~  377 (379)
                      ++||||+|+|++++||.|.|++|+++.|+.
T Consensus       316 ~~gLgGv~~W~l~~Dd~~~ll~a~~~~l~~  345 (356)
T 3aqu_A          316 QRGLLGYFSWHVGADDNSGLSRAASQAWDA  345 (356)
T ss_dssp             HTTCCEEEEECGGGSSTTHHHHHHHHHHHH
T ss_pred             hCCCCeEEEEeccCCCCchHHHHHHHHhcc
Confidence            999999999999999999999999999874
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Back     alignment and structure
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* Back     alignment and structure
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 379
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 7e-49
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 1e-47
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 2e-46
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 2e-04
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 4e-46
d1goia2356 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic 1e-45
d1ll7a1330 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( 3e-43
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 3e-41
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 8e-05
d1jnda1327 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f 2e-39
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 7e-38
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 5e-06
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 2e-37
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 2e-04
d1nara_289 c.1.8.5 (A:) Seed storage protein {Vicia narbonens 1e-28
d1edta_265 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St 2e-26
d2ebna_285 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 2e-24
d2hvma_273 c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para 4e-19
d1eoka_282 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 2e-14
d1ta3a_274 c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { 2e-14
d1vf8a270 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo 3e-13
d1cnva_283 c.1.8.5 (A:) Seed storage protein {Jack bean (Cana 8e-13
d1wb0a268 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo 6e-12
d2pi6a268 d.26.3.1 (A:240-307) Signal processing protein (SP 2e-09
d1itxa272 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul 1e-08
d1kfwa261 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Ar 1e-06
d1edqa373 d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc 2e-06
d1ll7a262 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidio 4e-04
d1w9pa262 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumi 0.001
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase-like lectin ym1, saccharide binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  164 bits (417), Expect = 7e-49
 Identities = 80/257 (31%), Positives = 121/257 (47%), Gaps = 24/257 (9%)

Query: 36  AYWPSWAE------SFPPSAINTNLFTHIYYAFLMPNNVTYKFNIDNSTAIQLSNFTTTL 89
            Y+ SWA+      SF P  I+  L TH+ YAF    N   +    +   ++       L
Sbjct: 5   CYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQN--NEITYTHEQDLRDYEALNGL 62

Query: 90  HHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGFDGLDLDWEFP- 148
             KN  +KTL +IGG     + F  M S P++RQ FI S I   R++ FDGL+LDW++P 
Sbjct: 63  KDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPG 122

Query: 149 ---QNPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGS 205
                PK+ H   +L+ E R A E E+     P LL T+     +D     +   Y +  
Sbjct: 123 SRGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDV----IKSGYKIPE 178

Query: 206 INRNLDWINAMCFDYHGGWDNTTTGAHAALYD------PKSNLSTSYGLKSWLRAGVHRS 259
           ++++LD+I  M +D H   D  T   ++ LY         ++L+    +  W   G    
Sbjct: 179 LSQSLDYIQVMTYDLHDPKDGYTG-ENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASE 237

Query: 260 KLVMGLPLYG-RSWKLK 275
           KL++G P    RS+KLK
Sbjct: 238 KLIVGFPADNVRSFKLK 254
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273 Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282 Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Length = 283 Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72 Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 61 Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73 Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 62 Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 62 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
d1itxa1347 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 100.0
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 100.0
d2pi6a1292 Signal processing protein (SPC-40, MGP-40) {Sheep 100.0
d1w9pa1333 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 100.0
d1vf8a1302 Chitinase-like lectin ym1, saccharide binding doma 100.0
d1kfwa1374 Psychrophilic chitinase B {Arthrobacter sp., tad20 100.0
d1edqa2358 Chitinase A, catalytic domain {Serratia marcescens 100.0
d1ll7a1330 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 100.0
d1jnda1327 Imaginal disc growth factor-2 {Fruit fly (Drosophi 100.0
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 100.0
d1nara_289 Seed storage protein {Vicia narbonensis, Narbonin 99.98
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 99.97
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 99.96
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.95
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 99.94
d1ta3a_274 Xylanase inhibitor protein I, XIP-I {Wheat (Tritic 99.93
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.82
d1vf8a270 Chitinase-like lectin ym1 {Mouse (Mus musculus) [T 99.42
d1wb0a268 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 99.26
d2pi6a268 Signal processing protein (SPC-40, MGP-40) {Sheep 99.19
d1itxa272 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 98.99
d1edqa373 Chitinase A {Serratia marcescens [TaxId: 615]} 98.77
d1kfwa261 Psychrophilic chitinase B {Arthrobacter sp., tad20 98.67
d1jnda292 Imaginal disc growth factor-2 {Fruit fly (Drosophi 98.65
d1w9pa262 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 97.8
d1ll7a262 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 97.76
d1goia388 Chitinase B {Serratia marcescens [TaxId: 615]} 97.76
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 90.68
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 87.38
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 85.36
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 84.92
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 83.41
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 81.75
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 80.21
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase A1
species: Bacillus circulans [TaxId: 1397]

Probab=100.00  E-value=6.1e-58  Score=429.71  Aligned_cols=272  Identities=30%  Similarity=0.545  Sum_probs=236.7

Q ss_pred             CCCCCeEEEEecCC---CCCCCCCCCCCCCCcEEEEEEEeeeCCCcEEEeC-----------------------------
Q 040415           28 ASPPPVKAAYWPSW---AESFPPSAINTNLFTHIYYAFLMPNNVTYKFNID-----------------------------   75 (379)
Q Consensus        28 ~~~~~~~~gy~~~w---~~~~~~~~~~~~~~t~ii~~~~~~~~~~~~~~~~-----------------------------   75 (379)
                      .+...+++|||++|   .+.+.+.+++.++||||+|+|+.++.++ .+...                             
T Consensus         8 a~~~~rvv~Yy~~W~~y~~~~~~~~i~~~~~THi~yaF~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (347)
T d1itxa1           8 AADSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNG-IHGNPDPSGPNPVTWTCQNEKSQTINVPNGTIVL   86 (347)
T ss_dssp             GGGGCEEEEEEEGGGGTTTCCCGGGCCGGGCSEEEEEEEEECBTT-EEEECCTTSSCCEEEECBCTTSCBCCCCTTCEEE
T ss_pred             CCCCCEEEEEECcccccCCCCChhHCCHhhCCeEEEeeEeecCCc-ccccCcccccccccccccccccccccCCCceEEe
Confidence            44568899999999   4568899999999999999999998665 33221                             


Q ss_pred             -Cc----------------chHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCcchhhhhCCHHHHHHHHHHHHHHHHhcCC
Q 040415           76 -NS----------------TAIQLSNFTTTLHHKNPPVKTLFSIGGAGADTSIFVDMASHPRSRQAFIHSSIEVARKFGF  138 (379)
Q Consensus        76 -~~----------------~~~~~~~~~~~lk~~~~~~kvllsigg~~~~~~~~~~~~~~~~~r~~f~~~i~~~l~~~g~  138 (379)
                       ++                ....+.++. .+|+++|++||++|||||+. +..|+.++++++.|++||+++++++++|||
T Consensus        87 ~d~~~d~~~~~~~~~~~~~~~g~~~~~~-~lK~~~p~lKvllSiGGw~~-s~~Fs~~~~~~~~R~~Fi~siv~~l~~~~f  164 (347)
T d1itxa1          87 GDPWIDTGKTFAGDTWDQPIAGNINQLN-KLKQTNPNLKTIISVGGWTW-SNRFSDVAATAATREVFANSAVDFLRKYNF  164 (347)
T ss_dssp             SSHHHHHTSCCTTCCSSSSCCHHHHHHH-HHHHHSTTCEEEEEEECSSS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCchhhhccccccccccccchhHHHHHH-HHHHhCCCCEEEEEEcCCCC-CcchhhhhcCHHHHHHHHHHHHHHHHHhCC
Confidence             11                112455554 79999999999999999987 888999999999999999999999999999


Q ss_pred             CEEEEeecCCC---------CCcccchHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccccccccccccCCcChhhhhhc
Q 040415          139 DGLDLDWEFPQ---------NPKEMHDLGLLLDEWRLALEREAKATCQPPLLFTAAVYFSVDFFVADVYRKYPVGSINRN  209 (379)
Q Consensus       139 DGidiD~E~~~---------~~~~~~~~~~fl~~l~~~l~~~~~~~~~~~~~ls~a~~~~~~~~~~~~~~~~~~~~l~~~  209 (379)
                      ||||||||+|.         .++++.+|+.||++||++|+.+++.+++ .+++++++++....     ...++++++.++
T Consensus       165 DGIDiDWE~P~~~g~~~~~~~~~d~~nf~~ll~eLr~~l~~~~~~~~~-~~~ls~a~~~~~~~-----~~~~d~~~i~~~  238 (347)
T d1itxa1         165 DGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGK-KYLLTIASGASATY-----AANTELAKIAAI  238 (347)
T ss_dssp             SEEEEECSCSSSCSCTTSCCCTTHHHHHHHHHHHHHHHHHHHHHHHTS-CCEEEEEECCSHHH-----HHTSCHHHHHHH
T ss_pred             CcEEEecccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhcCC-ccceeecccchhhh-----hhhccHHHHhhc
Confidence            99999999984         3568899999999999999998877665 47899999876654     457899999999


Q ss_pred             CcEEEeecccccCCCCCCCCCCCcccCC----------CCCCccHHHHHHHHHHcCCCCCCeeeeccccccceeccCCCC
Q 040415          210 LDWINAMCFDYHGGWDNTTTGAHAALYD----------PKSNLSTSYGLKSWLRAGVHRSKLVMGLPLYGRSWKLKDPNS  279 (379)
Q Consensus       210 vD~v~lm~Yd~~~~~~~~~~~~~spl~~----------~~~~~~i~~~v~~~~~~gv~~~Kl~lglp~yG~~~~~~~~~~  279 (379)
                      ||||+||+||+|++|. +.++|+|||+.          ....++++.+|+.|+++|+|++||+||||             
T Consensus       239 vD~vnvMtYD~~g~w~-~~~g~~apL~~~~~~~~~~~~~~~~~~v~~~v~~~~~~G~p~~KlvlGip-------------  304 (347)
T d1itxa1         239 VDWINIMTYDFNGAWQ-KISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVP-------------  304 (347)
T ss_dssp             SSEEEECCCCSSCTTS-SBCCCSSCSSCCHHHHHTTCTTTTTCSHHHHHHHHHHHTCCGGGEEEEEE-------------
T ss_pred             cCEEEeeeccccCCCC-CcccccCCCcCCcccccccCCCCCceeHHHHHHHHHHCCCCHHHeEEEec-------------
Confidence            9999999999999999 78999999973          12356899999999999999999999987             


Q ss_pred             CCCCCCCCCCCCCCCccccHHHHHHhhhcCCcEEEEecCceeEEEEeCCEEEEECCHHHHHHHHHHHHHcCCceEEEeec
Q 040415          280 HEIGSPAVDVGPGDKGLMQFVQVGEFNRMNGATVVYDVESVSAYSFAGSTWIGYDDEISATIKIGFAQALGLRGYFFWAL  359 (379)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~y~~i~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~y~d~~Sl~~K~~~~~~~gl~Gv~iW~l  359 (379)
                                                                           |||++|++.|++||+++||||+|+|++
T Consensus       305 -----------------------------------------------------fd~~~si~~K~~y~k~~~LgGvmiW~l  331 (347)
T d1itxa1         305 -----------------------------------------------------FDDAESVGYKTAYIKSKGLGGAMFWEL  331 (347)
T ss_dssp             -----------------------------------------------------SCCHHHHHHHHHHHHHHTCCEEEEECG
T ss_pred             -----------------------------------------------------cCCHHHHHHHHHHHHhCCCCEEEEEEe
Confidence                                                                 589999999999999999999999999


Q ss_pred             cCCCcccHHHHHHHhc
Q 040415          360 SYDNEWKISTQVARAW  375 (379)
Q Consensus       360 ~~Dd~~~l~~a~~~~~  375 (379)
                      ++||.+.|++|+++.|
T Consensus       332 ~~Dd~~~L~~a~~~~l  347 (347)
T d1itxa1         332 SGDRNKTLQNKLKADL  347 (347)
T ss_dssp             GGCTTCHHHHHHHHHC
T ss_pred             cCCCCcHHHHHHHhhC
Confidence            9999999999999876
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure