Citrus Sinensis ID: 040419

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MNSLVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDYKKDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTNDGDQSCQNLTSKRSQIAEDTTRNH
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccEEEEEEccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHcccccccEEEEEEEcccccccccccHccccccccEEEEEcccccccccccccccHcccccEEEccccccEEccccccEEEEEEEEEEEEcccccccccccEEEEEEEccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mnslvgfrfyptDEEIIRLLKKKRLDPAFFVHTIkeidfysfepwelpchseiqseEEVWyffcepdykyaksrrvnrgtnegtwkktgngskikrkystevigtkrilsfschdsaskkaktEWVMHEIaveddpdykkdFVVCRLERKREKKMLGVVSTkrkrdeklgvstndgdqscqnlTSKRSQIaedttrnh
Flexible Loop (DISEMBL)
mnslvgfrfypTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYaksrrvnrgtnegtwkktgngskikrkystevigtkrilsfschdsaskkakteWVMHeiaveddpdykkDFVVCRlerkrekkmlgvvstkrkrdeklgvstndgdqscqnltskrsqiaedttrnh
Low Complexity Region (SEG)
MNSLVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDYKKDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTNDGDQSCQNLTSKRSQIAEDTTRNH
Disordered region (IsUnstruct)
***LVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRV********W********IKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDYKKDFVVCRLE**************************************************
Disordered Region (DISOPRED)
MNSLVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDYKKDFVVCRLER*************************************************
Disordered Region (DISEMBL)
MNSLVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDYKKDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTNDGDQSCQNLTSKR***********
Disordered Region (DISPRO)
*NSLVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDYKKDFVVCRLERKRE**********************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSLVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDYKKDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTNDGDQSCQNLTSKRSQIAEDTTRNH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
O81913	359	NAC domain-containing pro	yes	no	0.792	0.437	0.415	4e-24
O81914	362	NAC domain-containing pro	no	no	0.787	0.430	0.381	3e-23
Q9FLJ2	336	NAC domain-containing pro	no	no	0.732	0.431	0.417	6e-23
Q9M126	457	NAC domain-containing pro	no	no	0.747	0.323	0.407	8e-22
Q9FIW5	337	Putative NAC domain-conta	no	no	0.626	0.367	0.437	2e-21
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.924	0.488	0.341	3e-21
Q84K00	567	NAC domain-containing pro	no	no	0.712	0.248	0.388	3e-21
Q94F58	340	NAC domain-containing pro	no	no	0.717	0.417	0.398	4e-21
Q5CD17	396	NAC domain-containing pro	no	no	0.727	0.363	0.356	5e-21
A2YMR0	425	NAC transcription factor	N/A	no	0.636	0.296	0.427	6e-21

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score =  111 bits (277), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 1   MNSLVGFRFYPTDEEII-RLLKKKRLDP--AFFVHTIKEIDFYSFEPWELPCHSEIQSEE 57
           M + VGFRF P DEEI+   L+ K LD   +     I  +D  SFEPW+LP  S I+S +
Sbjct: 1   MMNPVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRD 60

Query: 58  EVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYST-EVIGTKRILSFSCHDS 116
            VWYFF   + KY +  +  R TN G WKKTG    + RK    E IG KR+L F   D 
Sbjct: 61  GVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDG 120

Query: 117 ASKKAKTEWVMHEI-AVEDDPDYKKDFVVCRLERKREKKMLGVVST 161
               +KT+WVMHE  A    P+    + VC++E K E+  +   ST
Sbjct: 121 ----SKTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSST 162

Arabidopsis thaliana (taxid: 3702)

>sp|O81914|NAC5_ARATH NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2

 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 9/165 (5%)

Query: 1   MNSLVGFRFYPTDEEIIRL-LKKKRL--DPAFFVHTIKEIDFYSFEPWELPCHSEIQSEE 57
           M + VGFRF PTD EI+ + L+ K L  + +     I  +D  SF+PW+LP HS +++ +
Sbjct: 1   MANPVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRD 60

Query: 58  EVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYST-EVIGTKRILSFSCHDS 116
           +VWYFF   + KY K  R  R T  G WKKTG    I RK    E IG KR+L F  H  
Sbjct: 61  QVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVFKNHGG 120

Query: 117 ASKKAKTEWVMHEI-AVEDDPDYKKDFVVCRLERKREKKMLGVVS 160
               +K++W MHE  A    P+    + +C+++ K E++   V +
Sbjct: 121 ----SKSDWAMHEYHATFSSPNQIMTYTLCKVKFKGERREFSVAT 161

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  107 bits (266), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 1   MNSLVGFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEV 59
           M+   GFRF+PTDEE+I   L KK LD +F    I E+D    EPWELP  +++  +E  
Sbjct: 14  MDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKE-- 71

Query: 60  WYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASK 119
           WYFFC  D KY    R NR T  G WK TG   +I R  S  ++G K+ L F     A K
Sbjct: 72  WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVF-YRGRAPK 128

Query: 120 KAKTEWVMHEIAVED-------DPDYKKDFVVCRLERK 150
             KT WVMHE  +E            K ++V+CR+ +K
Sbjct: 129 GQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK 166

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M126|NAC69_ARATH NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1

 Score =  103 bits (257), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 4   LVGFRFYPTDEEIIR-LLKKKRLDPAFFV-HTIKEIDFYSFEPWELPCHSEIQSEEEVWY 61
           LVG+RFYPT EE+I   LK K L   + V   I EI+  S++P  LP  S+I+S++ VWY
Sbjct: 5   LVGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWY 64

Query: 62  FFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEV-IGTKRILSFSCHDSASKK 120
           FFC  +Y  AK +   R T+ G WK TG   KIK K      IG K+ L +       K 
Sbjct: 65  FFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVY-YEGRVPKG 123

Query: 121 AKTEWVMHEIAVEDDPDYKKDFVVCRLERKRE 152
             T WVMHE  +   P  ++++V+C++  K E
Sbjct: 124 VWTPWVMHEYHITCLPQDQRNYVICQVMYKGE 155

Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis mediated by calpain or its functional homolog. Regulates cytokinin signaling during cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=4 SV=1

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 4   LVGFRFYPTDEEIIRL-LKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYF 62
           L GFRF+PTDEE++   LK+K L  +     IK++D Y ++PW+LP  + +  +E  WYF
Sbjct: 21  LPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKE--WYF 78

Query: 63  FCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAK 122
           +C  D KY  S R NR T  G WK TG    I    ST  IG K+ L F     A+K  K
Sbjct: 79  YCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVF-YRGRAAKGVK 137

Query: 123 TEWVMHEI 130
           T+W+MHE 
Sbjct: 138 TDWMMHEF 145

Arabidopsis thaliana (taxid: 3702)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score =  101 bits (252), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 19/202 (9%)

Query: 6   GFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE+I   L +K LD  F    I E+D    EPW+LP  +++  +E  WYFF 
Sbjct: 20  GFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE--WYFFS 77

Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
             D KY    R NR T  G WK TG   +I    +  ++G K+ L F     A K  K+ 
Sbjct: 78  LRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVF-YKGRAPKGEKSN 136

Query: 125 WVMHEIAVEDDPDY-------KKDFVVCRLERKREKKMLGVVS-TKRKRDEKLGVSTNDG 176
           WVMHE  +E    Y       K ++V+ R+ +K      G VS         + VS+  G
Sbjct: 137 WVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGTG 196

Query: 177 DQSCQNLTSKRSQIAEDTTRNH 198
                   SK++++    +RN+
Sbjct: 197 P-------SKKTKVPSTISRNY 211

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  101 bits (251), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 11/152 (7%)

Query: 6   GFRFYPTDEEIIRL-LKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE++R  LK+K  +  F    I   D Y  EPW+LP  S+++S +  WYFF 
Sbjct: 12  GFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFS 71

Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
             D KY+   + NR T +G WK TG   +I+    + V+G K+ L +     A +  +T 
Sbjct: 72  MLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYH-KGRAPRGERTN 128

Query: 125 WVMHEIAVEDDPDYKK------DFVVCRLERK 150
           WVMHE  + D+ D KK       +V+CR+ +K
Sbjct: 129 WVMHEYRLSDE-DLKKAGVPQEAYVLCRIFQK 159

Arabidopsis thaliana (taxid: 3702)

>sp|Q94F58|NAC89_ARATH NAC domain-containing protein 89 OS=Arabidopsis thaliana GN=NAC089 PE=1 SV=1

 Score =  101 bits (251), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 82/148 (55%), Gaps = 6/148 (4%)

Query: 6   GFRFYPTDEEIIRLLKKKRLDPA-FFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GF+F PTD E+I    K+++D     V  I +++ Y+FEPW+LP  S ++S+ E W+FFC
Sbjct: 24  GFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLPDKSIVKSDSE-WFFFC 82

Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
               KY    +  R T  G WK TG    +K    +EVIGTKR L F     A K  +T+
Sbjct: 83  ARGKKYPHGSQNRRATKMGYWKATGKERDVKS--GSEVIGTKRTLVFHIG-RAPKGERTD 139

Query: 125 WVMHEIAVEDDPDYKKDFVVCRLERKRE 152
           W+MHE  V+         VVCR+ R +E
Sbjct: 140 WIMHEYCVK-GVSLDDAMVVCRVRRNKE 166

Transcription factor involved in plant cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5CD17|NAC77_ORYSJ NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2

 Score =  100 bits (250), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 27/171 (15%)

Query: 6   GFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTD E+I   L +K L+P+F    I E+D    EPW+LP  +++  +E  WYFF 
Sbjct: 22  GFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKE--WYFFS 79

Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYST--------------EVIGTKRILS 110
             D KY    R NR T EG WK TG   +I R+ +               +++G K+ L 
Sbjct: 80  HKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLV 139

Query: 111 FSCHDSASKKAKTEWVMHEIAVEDD-----PDY----KKDFVVCRLERKRE 152
           F     A K  KT WVMHE  +  +     P+     K ++VVC++  K++
Sbjct: 140 FYM-GRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNPKDEWVVCKVFHKKQ 189

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  100 bits (250), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 6   GFRFYPTDEE-IIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE ++  LKKK       V  I E+D Y F+PWELP  +    +E  WYFF 
Sbjct: 32  GFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQE--WYFFS 89

Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYST-EVIGTKRILSFSCHDSASKKAKT 123
             D KY    R NR    G WK TG    I    ST E +G K+ L F       K  KT
Sbjct: 90  PRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVF-YRGKPPKGVKT 148

Query: 124 EWVMHEIAVED 134
            W+MHE  + D
Sbjct: 149 NWIMHEYRLTD 159

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
356560207	1061	PREDICTED: uncharacterized protein LOC10	0.777	0.145	0.467	1e-29
356522462	497	PREDICTED: NAC domain-containing protein	0.772	0.307	0.458	1e-28
296089037	335	unnamed protein product [Vitis vinifera]	0.742	0.438	0.453	1e-28
225453680	560	PREDICTED: uncharacterized protein LOC10	0.742	0.262	0.453	1e-28
358346553	470	NAC domain protein [Medicago truncatula]	0.742	0.312	0.423	3e-26
449485756	196	PREDICTED: NAC transcription factor ONAC	0.868	0.877	0.394	8e-26
449435712	196	PREDICTED: NAC transcription factor ONAC	0.868	0.877	0.394	1e-25
242079615	670	hypothetical protein SORBIDRAFT_07g02390	0.717	0.211	0.416	2e-25
358346543	419	NAC domain protein [Medicago truncatula]	0.712	0.336	0.427	2e-25
358346559	400	NAC domain protein [Medicago truncatula]	0.712	0.352	0.441	3e-25

>gi|356560207|ref|XP_003548385.1| PREDICTED: uncharacterized protein LOC100778755 [Glycine max]

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/156 (46%), Positives = 94/156 (60%), Gaps = 2/156 (1%)

Query: 5   VGFRFYPTDEEIIRL-LKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF PTDEE++   LK K L   F VH I EID    EPW++P  S I+S++  W+FF
Sbjct: 13  VGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPGRSVIKSDDPEWFFF 72

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
              DYKY KS+R NR T  G WK TGN  KI+   ++ VIGTK+ L F       + AKT
Sbjct: 73  SPVDYKYLKSKRFNRTTKRGFWKATGNDRKIRIPGTSNVIGTKKTLVFH-QGRVPRGAKT 131

Query: 124 EWVMHEIAVEDDPDYKKDFVVCRLERKREKKMLGVV 159
            WV+HE       + ++ FV+CRL +K EKK  G +
Sbjct: 132 NWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGI 167

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 94/157 (59%), Gaps = 4/157 (2%)

Query: 5   VGFRFYPTDEEIIRL-LKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF PTDEE++   LK K L   F VH I EID    EPW++P  S I+S++  W+FF
Sbjct: 14  VGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPERSVIKSDDPEWFFF 73

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDS-ASKKAK 122
              DYKY KS+R NR T  G WK TGN   +K   ++ VIGTK+ L F  H+    +  K
Sbjct: 74  SPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTSNVIGTKKTLVF--HEGRGPRGVK 131

Query: 123 TEWVMHEIAVEDDPDYKKDFVVCRLERKREKKMLGVV 159
           T WV+HE       + ++ FV+CRL +K EKK  G +
Sbjct: 132 TNWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGI 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089037|emb|CBI38740.3| unnamed protein product [Vitis vinifera]

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 5/152 (3%)

Query: 5   VGFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF+PTDEE++   LK K L     V  I E+D   +EPW+LP  S IQ+ +  W+FF
Sbjct: 8   VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 67

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
           C PDYKY   RR NR T  G WK TG    IK + + E++GTK+ L F     A +  +T
Sbjct: 68  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVF-YRGRAPQSVRT 126

Query: 124 EWVMHE--IAVEDDPDYKKDFVVCRLERKREK 153
            WVMHE   A+   P   K +V+CRL+RK ++
Sbjct: 127 NWVMHEYRAAIASLP-ANKAYVLCRLKRKTDE 157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453680|ref|XP_002268892.1| PREDICTED: uncharacterized protein LOC100252386 [Vitis vinifera]

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 5/152 (3%)

Query: 5   VGFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF+PTDEE++   LK K L     V  I E+D   +EPW+LP  S IQ+ +  W+FF
Sbjct: 16  VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 75

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
           C PDYKY   RR NR T  G WK TG    IK + + E++GTK+ L F     A +  +T
Sbjct: 76  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVF-YRGRAPQSVRT 134

Query: 124 EWVMHE--IAVEDDPDYKKDFVVCRLERKREK 153
            WVMHE   A+   P   K +V+CRL+RK ++
Sbjct: 135 NWVMHEYRAAIASLP-ANKAYVLCRLKRKTDE 165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346553|ref|XP_003637331.1| NAC domain protein [Medicago truncatula] gi|358346878|ref|XP_003637491.1| NAC domain protein [Medicago truncatula] gi|355503266|gb|AES84469.1| NAC domain protein [Medicago truncatula] gi|355503426|gb|AES84629.1| NAC domain protein [Medicago truncatula]

 Score =  123 bits (309), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 4/151 (2%)

Query: 5   VGFRFYPTDEEIIRLLKKKRL--DPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYF 62
           VGFRF PT EE++    + +L  + A   + I E+D   FEPWELP  S I+S+++ W+F
Sbjct: 195 VGFRFCPTGEELVNHYLRNKLLGNDAIVNNVIAEVDIRKFEPWELPARSVIKSDDQEWFF 254

Query: 63  FCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAK 122
            C  +YKYAKS+R  R TN G WK TG    I+ + + EVIG K+ L +  H++     K
Sbjct: 255 LCPIEYKYAKSKRFKRTTNNGFWKATGMDRNIRIRGTNEVIGIKKTLVY--HENHVPGVK 312

Query: 123 TEWVMHEIAVEDDPDYKKDFVVCRLERKREK 153
           T W++HE       D ++ FV+CRL +K EK
Sbjct: 313 TNWIIHEYHDVTLEDSQRTFVLCRLMKKFEK 343

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449485756|ref|XP_004157266.1| PREDICTED: NAC transcription factor ONAC010-like [Cucumis sativus]

 Score =  122 bits (306), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 5   VGFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF+PTDEE+    LK K +     V  I+++D  +FEPWELP  S  Q+ +  W+FF
Sbjct: 15  VGFRFHPTDEELFNHYLKNKIVGRESLVQYIRQVDICNFEPWELPSLSNDQTGDHQWFFF 74

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
              D+KY+  RR NR T  G WK TG   +I  + +  +IGTK+ L F          KT
Sbjct: 75  SAQDFKYSNGRRSNRATKTGYWKSTGKDRQIMARVTKVLIGTKKTLVFYS-GRVPNGIKT 133

Query: 124 EWVMHEIAVEDDPDYK--KDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTN--DGDQS 179
            WV+HE  +  DP+    K FV+C L+RK E+    V+  +      L  STN   G+Q+
Sbjct: 134 NWVIHEYHLHPDPNLAQLKSFVICVLKRKFEQS--DVLMFEEAEPNGLLTSTNVATGNQN 191

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435712|ref|XP_004135638.1| PREDICTED: NAC transcription factor ONAC010-like [Cucumis sativus]

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 5   VGFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF+PTDEE+    LK K +     V  I+++D  +FEPWELP  S  Q+ +  W+FF
Sbjct: 15  VGFRFHPTDEELFNHYLKNKIVGRESLVQYIRQVDICNFEPWELPSLSNDQTGDHQWFFF 74

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
              D+KY+  RR NR T  G WK TG   +I  + +  +IGTK+ L F          KT
Sbjct: 75  SAQDFKYSNGRRSNRATKTGYWKSTGKDRQIMARGTKVLIGTKKTLVFYS-GRVPNGIKT 133

Query: 124 EWVMHEIAVEDDPDYK--KDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTN--DGDQS 179
            WV+HE  +  DP+    K FV+C L+RK E+    V+  +      L  STN   G+Q+
Sbjct: 134 NWVIHEYHLHPDPNLAQLKSFVICVLKRKFEQS--DVLMFEEAEPNGLLTSTNVATGNQN 191

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242079615|ref|XP_002444576.1| hypothetical protein SORBIDRAFT_07g023900 [Sorghum bicolor] gi|241940926|gb|EES14071.1| hypothetical protein SORBIDRAFT_07g023900 [Sorghum bicolor]

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 7/149 (4%)

Query: 6   GFRFYPTDEEIIRL-LKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE++   LK+K L     V  I E+D Y  EPW+LP  S ++S +  WYFF 
Sbjct: 35  GFRFHPTDEELVSYYLKRKVLGRPLKVDAIAEVDLYKVEPWDLPARSRLRSRDSQWYFFS 94

Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
             D K+A   R NR T+ G WK TG   ++  ++   V+G K+ L F     A K  +T 
Sbjct: 95  RLDRKHANRARTNRATSSGYWKTTGKDREV--RHGPRVVGMKKTLVFHA-GRAPKGERTN 151

Query: 125 WVMHEIAVEDDPDY---KKDFVVCRLERK 150
           WVMHE  +E D      +  FVVCR+ +K
Sbjct: 152 WVMHEYRLEGDDAAGIPQDSFVVCRIFQK 180

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346543|ref|XP_003637326.1| NAC domain protein [Medicago truncatula] gi|355503261|gb|AES84464.1| NAC domain protein [Medicago truncatula]

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 5   VGFRFYPTDEEIIRLLKKKRL--DPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYF 62
           VGFRF PTDEE++    KK+L  + +   + I E+D  ++EPW+LP  S ++S++  W+F
Sbjct: 14  VGFRFRPTDEELVNHYLKKKLLGNDSIVNNVIAEVDVCNYEPWDLPAFSVVKSDDPEWFF 73

Query: 63  FCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAK 122
            C  DYKYAKS+R  R TN G WK TG   KIK + S  +IG K+ L +  ++      K
Sbjct: 74  LCPIDYKYAKSKRFKRTTNTGFWKATGKDRKIKVRGSNNIIGIKKTLVY--YNGRVPGVK 131

Query: 123 TEWVMHEIAVEDDPDYKKDFVVCRL 147
           + WV+HE       D K+ FV+CRL
Sbjct: 132 SSWVIHEYHDTTFEDDKRTFVLCRL 156

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346559|ref|XP_003637334.1| NAC domain protein [Medicago truncatula] gi|358346862|ref|XP_003637483.1| NAC domain protein [Medicago truncatula] gi|355503269|gb|AES84472.1| NAC domain protein [Medicago truncatula] gi|355503418|gb|AES84621.1| NAC domain protein [Medicago truncatula]

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 4/145 (2%)

Query: 5   VGFRFYPTDEEIIRLLKKKRL--DPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYF 62
           VGFRF PTDEE++    KK+L  + +   + I E+D   FEPW+LP  S I+S +  W+F
Sbjct: 13  VGFRFRPTDEELVNHYLKKKLLGNDSIVNNVIAEVDVCKFEPWDLPACSLIKSNDPEWFF 72

Query: 63  FCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAK 122
           FC  DYKYA S+R NR T  G WK TG   KIK + +  VIG K+ L F  ++      K
Sbjct: 73  FCPRDYKYANSKRFNRRTQCGYWKATGLDRKIKVRGTDNVIGIKKTLVF--YNGCVPGVK 130

Query: 123 TEWVMHEIAVEDDPDYKKDFVVCRL 147
           + WV+HE       D ++ FV+CRL
Sbjct: 131 SNWVIHEYHSATFHDNQRTFVLCRL 155

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
TAIR|locus:2204783	359	NAC004 "NAC domain containing	0.787	0.434	0.421	5.2e-26
TAIR|locus:2114678	469	NAC062 "NAC domain containing	0.853	0.360	0.403	8.4e-26
TAIR|locus:2141075	262	NAC071 "NAC domain containing	0.959	0.725	0.338	2.2e-25
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.878	0.595	0.367	2.9e-25
TAIR|locus:2153899	451	TIP "TCV-interacting protein"	0.737	0.323	0.428	4e-25
TAIR|locus:2039600	335	NTL8 "NTM1-like 8" [Arabidopsi	0.803	0.474	0.372	2.6e-24
TAIR|locus:2163153	336	NAC100 "NAC domain containing	0.707	0.416	0.431	3.3e-24
TAIR|locus:2196641	305	NAC015 "NAC domain containing	0.752	0.488	0.384	6.8e-24
TAIR|locus:2160324	329	NAC080 "NAC domain containing	0.707	0.425	0.431	6.8e-24
TAIR|locus:2033745	283	NAC011 "NAC domain containing	0.939	0.657	0.331	1.1e-23

TAIR|locus:2204783 NAC004 "NAC domain containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 70/166 (42%), Positives = 90/166 (54%)

Query:     1 MNSLVGFRFYPTDEEII-RLLKKKRLDP--AFFVHTIKEIDFYSFEPWELPCHSEIQSEE 57
             MN  VGFRF P DEEI+   L+ K LD   +     I  +D  SFEPW+LP  S I+S +
Sbjct:     2 MNP-VGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRD 60

Query:    58 EVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYST-EVIGTKRILSFSCHDS 116
              VWYFF   + KY +  +  R TN G WKKTG    + RK    E IG KR+L F   D 
Sbjct:    61 GVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDG 120

Query:   117 ASKKAKTEWVMHEI-AVEDDPDYKKDFVVCRLERKREKKMLGVVST 161
             +    KT+WVMHE  A    P+    + VC++E K E+  +   ST
Sbjct:   121 S----KTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSST 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2114678 NAC062 "NAC domain containing protein 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 73/181 (40%), Positives = 102/181 (56%)

Query:     1 MNSL-VGFRFYPTDEEIIRLLKKKRLDPAFF-VHTIKEIDFYSFEPWELPCHSEIQSEEE 58
             M+SL VG RF PTDEE+IR   +++++     V  I+EID   +EPW+LP  S I++++ 
Sbjct:    10 MDSLPVGLRFRPTDEELIRYYLRRKINGHDDDVKAIREIDICKWEPWDLPDFSVIKTKDS 69

Query:    59 VWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSAS 118
              W +FC  D KY    R NR T  G WK TG   KIK    T +IG KR L F     A 
Sbjct:    70 EWLYFCPLDRKYPSGSRQNRATVAGYWKATGKDRKIKSG-KTNIIGVKRTLVFHA-GRAP 127

Query:   119 KKAKTEWVMHEI-AVEDD-----PDYKKDFVVCRLERKREKKMLGVVSTKRKRDEKLGVS 172
             +  +T W++HE  A EDD     P  +  FV+C+L +K E+ +LG   +K    E+  VS
Sbjct:   128 RGTRTNWIIHEYRATEDDLSGTNPG-QSPFVICKLFKK-EELVLGEEDSKSDEVEEPAVS 185

Query:   173 T 173
             +
Sbjct:   186 S 186

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009814 "defense response, incompatible interaction" evidence=IMP

GO:0070417 "cellular response to cold" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2141075 NAC071 "NAC domain containing protein 71" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 68/201 (33%), Positives = 99/201 (49%)

Query:     6 GFRFYPTDEEIIRLLKKKRLDPAFF-VHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I     ++++     +  I  ID Y F+PWELP  S + + +  W+FFC
Sbjct:     9 GFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNRDLEWFFFC 68

Query:    65 EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
               D KYA   R NR T  G WK TG   KI  K S  + G ++ L F     A    +T 
Sbjct:    69 PRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFY-EGRAPLGDRTN 127

Query:   125 WVMHEIA---VED----DPDYKKDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTND-G 176
             W MHE     ++D     P++K  F +CR+ +K E K     S K K ++ +G   +   
Sbjct:   128 WFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKNELKK-NSKSLKNKNEQDIGSCYSSLA 186

Query:   177 DQSCQNLTSKRSQIAEDTTRN 197
                C++  S+       +T N
Sbjct:   187 TSPCRDEASQIQSFKPSSTTN 207

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 69/188 (36%), Positives = 98/188 (52%)

Query:     6 GFRFYPTDEEIIRLLKKKRLDPAFF-VHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I    K++++     +  I  ID YSF+PWELP  S + + +  WYFFC
Sbjct:     9 GFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWYFFC 68

Query:    65 EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
               D KY    R NRGT  G WK TG   KI  + S+ +IG ++ L F     A    ++ 
Sbjct:    69 SRDKKYPNGFRTNRGTKAGYWKATGKDRKITSR-SSSIIGYRKTLVFY-KGRAPLGDRSN 126

Query:   125 WVMHEIAVEDDP------DYKKDFVVCRLERKREKKMLGVVSTK-RKRDEKLGVSTNDGD 177
             W+MHE  + DD       + K  FV+CR+  K E K     +TK RK   +  + + +  
Sbjct:   127 WIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIK----TNTKIRKIPSEQTIGSGESS 182

Query:   178 QSCQNLTS 185
                  +TS
Sbjct:   183 GLSSRVTS 190

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2153899 TIP "TCV-interacting protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 4.0e-25, P = 4.0e-25
 Identities = 66/154 (42%), Positives = 88/154 (57%)

Query:     5 VGFRFYPTDEEIIRLLKKKRLDPAFF-VHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
             VGFRF PTDEE++R   + +++     V  I+EID   +EPW+LP  S +++ +  W FF
Sbjct:    15 VGFRFSPTDEELVRYYLRLKINGHDNDVRVIREIDICKWEPWDLPDFSVVKTTDSEWLFF 74

Query:    64 CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
             C  D KY    R+NR T  G WK TG   KIK    T++IG KR L F     A K  +T
Sbjct:    75 CPLDRKYPSGSRMNRATVAGYWKATGKDRKIKSG-KTKIIGVKRTLVFYT-GRAPKGTRT 132

Query:   124 EWVMHEI-AVEDDPDYKKD----FVVCRLERKRE 152
              W+MHE  A E D D  K     FVVC+L +K++
Sbjct:   133 CWIMHEYRATEKDLDGTKSGQNPFVVCKLFKKQD 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0051607 "defense response to virus" evidence=IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2039600 NTL8 "NTM1-like 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 64/172 (37%), Positives = 92/172 (53%)

Query:     6 GFRFYPTDEEIIRLLKKKRLD-PAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF PTD E+I    ++++D     V  I E++ Y FEPW+LP  S+++SE E W++FC
Sbjct:    17 GFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLPEESKLKSENE-WFYFC 75

Query:    65 EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
                 KY    +  R T  G WK TG    +K     +V+GTKR L F     A +  +TE
Sbjct:    76 ARGRKYPHGSQSRRATQLGYWKATGKERSVKS--GNQVVGTKRTLVFHI-GRAPRGERTE 132

Query:   125 WVMHEIAVEDDPDYKKDFVVCRLERKREKKMLGVVSTKRKRDEKLGVSTNDG 176
             W+MHE  +   P  +   VVCRL +  + +     ST++  D   GV  +DG
Sbjct:   133 WIMHEYCIHGAP--QDALVVCRLRKNADFR---ASSTQKMED---GVVQDDG 176

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0009845 "seed germination" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2163153 NAC100 "NAC domain containing protein 100" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 66/153 (43%), Positives = 84/153 (54%)

Query:     6 GFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I   L KK LD +F    I E+D    EPWELP  +++  +E  WYFFC
Sbjct:    19 GFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKE--WYFFC 76

Query:    65 EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
               D KY    R NR T  G WK TG   +I R  S  ++G K+ L F     A K  KT 
Sbjct:    77 VRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFY-RGRAPKGQKTN 133

Query:   125 WVMHEIAVEDD------PDY-KKDFVVCRLERK 150
             WVMHE  +E        P   K ++V+CR+ +K
Sbjct:   134 WVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2196641 NAC015 "NAC domain containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 60/156 (38%), Positives = 83/156 (53%)

Query:     6 GFRFYPTDEEIIRLLKKKRLD-PAFFVHTIKEIDFYSFEPWELPCHSEIQSE-EEVWYFF 63
             GFRF+PTDEE++    KK++    F +  IKE+D    EPW+L    +I S  +  WYFF
Sbjct:    11 GFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEWYFF 70

Query:    64 CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
                D KY    R NR T+ G WK TG    I+  Y    IG ++ L F     A    KT
Sbjct:    71 SHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKK--IGMRKTLVFY-KGRAPHGQKT 127

Query:   124 EWVMHEIAVEDDPD--YKKDFVVCRLERKREKKMLG 157
             +W+MHE  +ED  D   +  +VVCR+ +K+    +G
Sbjct:   128 DWIMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKVG 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2160324 NAC080 "NAC domain containing protein 80" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 66/153 (43%), Positives = 83/153 (54%)

Query:     6 GFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I   L KK LD  F    I E+D    EPWELP  ++I  +E  WYFFC
Sbjct:    20 GFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKE--WYFFC 77

Query:    65 EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
               D KY    R NR T  G WK TG   +I R  S  ++G K+ L F     A K  KT 
Sbjct:    78 VRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFY-RGRAPKGQKTN 134

Query:   125 WVMHE------IAVEDDPDY-KKDFVVCRLERK 150
             WVMHE      ++  + P   K ++V+CR+  K
Sbjct:   135 WVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHK 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2033745 NAC011 "NAC domain containing protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 68/205 (33%), Positives = 101/205 (49%)

Query:     6 GFRFYPTDEEIIRLLKKKRLDPAFF-VHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
             GFRFYPTDEE++     +R +     +  I  +D Y F+PWELP  S + + +  W+FFC
Sbjct:     9 GFRFYPTDEELVGYYLHRRNEGLEIELEIIPLMDLYKFDPWELPEKSFLPNRDMEWFFFC 68

Query:    65 EPDYKYAKSRRVNRGTNEGTWKKTGNGSKI-----KRKYSTEVIGTKRILSFSCHDSASK 119
               D KY    R+NR T  G WK TG   KI         S+ + G ++ L F     A  
Sbjct:    69 HRDRKYQNGSRINRATKSGYWKATGKDRKIVCHSSSSSSSSSITGCRKTLVFYM-GRAPF 127

Query:   120 KAKTEWVMHEIAVEDDP------DYKKDFVVCRLERKREK--KMLGVVSTKRKRDEKLGV 171
               +TEWVMHE  + D+       ++K DF +CR+ ++ E   K   ++S +   DE L  
Sbjct:   128 GGRTEWVMHEYRLFDNDTSQGSLNFKGDFALCRVIKRNEHTLKKCEIISPEVS-DESL-- 184

Query:   172 STNDGDQSCQNLTSKRSQIAEDTTR 196
              +N+ +  CQ    ++       TR
Sbjct:   185 -SNNVNNFCQASDLEKGSCDASNTR 208

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Sb07g023900.1 hypothetical protein (670 aa) (Sorghum bicolor)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	198
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-41

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  136 bits (344), Expect = 2e-41
 Identities = 54/129 (41%), Positives = 69/129 (53%), Gaps = 7/129 (5%)

Query: 4   LVGFRFYPTDEEIIR--LLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWY 61
             GFRF+PTDEE++   L +K    P   +  I E+D Y FEPW+LP   + +  +  WY
Sbjct: 2   PPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREWY 60

Query: 62  FFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHD-SASKK 120
           FF   D KY    R NR T  G WK TG    +  K   EV+G K+ L F  +   A K 
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGG-EVVGMKKTLVF--YKGRAPKG 117

Query: 121 AKTEWVMHE 129
            KT+WVMHE
Sbjct: 118 EKTDWVMHE 126

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=5.8e-45  Score=279.21  Aligned_cols=127  Identities=43%  Similarity=0.739  Sum_probs=95.0

Q ss_pred             CCCCceeCCCHHHHHH-HHHHhhcCCCCCc-cceEeccCCCCCCCCCCCCCcccCCcceEEEeecccccccCCCcceecc
Q 040419            3 SLVGFRFYPTDEEIIR-LLKKKRLDPAFFV-HTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGT   80 (198)
Q Consensus         3 lp~G~rF~PtDeELi~-yL~~ki~g~~l~~-~~I~~~Dvy~~~P~~Lp~~~~~~~~~~~wyFF~~~~~~~~~g~R~~R~~   80 (198)
                      |||||||+|||+|||. ||++|+.|.+++. ++|+++|||++|||+|++..  .+++.+||||+++.+++.++.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~--~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKF--KGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHS--SS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhc--cCCCceEEEEEecccccCCcccccccc
Confidence            8999999999999999 9999999999988 89999999999999999422  234779999999999999999999999


Q ss_pred             CCceEEecCCCceEEeCCCCeEEEEEEEEEeeeecCCCCCCccCeEEEEEEeC
Q 040419           81 NEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVE  133 (198)
Q Consensus        81 ~~G~W~~~g~~~~I~~~~~g~viG~k~~l~F~~~g~~~~~~kT~W~M~EY~l~  133 (198)
                      ++|+|+.+++.+.|.+. ++.+||+|++|+|| .++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~-~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFY-SGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE--TTCEEEEEEEEEEE-ESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccc-cceeeeeEEEEEEE-eccCCCCCcCCeEEEEEEeC
Confidence            99999999999999997 37899999999999 88778889999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	198
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-19
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-19
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		9e-19

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 6   GFRFYPTDEEI-IRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GFRFYPTDEE+ ++ L +K     F +  I EID Y F+PW LP  +    +E  WYFF 
Sbjct: 23  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFFS 80
Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
             D KY    R NR    G WK TG    I  +   + +G K+ L F     A K  KT 
Sbjct: 81  PRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYI-GKAPKGTKTN 137
Query: 125 WVMHEIAVEDDPDYKK------DFVVCRLERKR 151
           W+MHE  +  +P  +       D+V+CR+ +K+
Sbjct: 138 WIMHEYRL-IEPSRRNGSTKLDDWVLCRIYKKQ 169

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 6   GFRFYPTDEEI-IRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFC 64
           GFRFYPTDEE+ ++ L +K     F +  I EID Y F+PW LP  +    +E  WYFF 
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFFS 77
Query: 65  EPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTE 124
             D KY    R NR    G WK TG    I  +   + +G K+ L F     A K  KT 
Sbjct: 78  PRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYI-GKAPKGTKTN 134
Query: 125 WVMHEIAVEDDPDYKK------DFVVCRLERKR 151
           W+MHE  +  +P  +       D+V+CR+ +K+
Sbjct: 135 WIMHEYRL-IEPSRRNGSTKLDDWVLCRIYKKQ 166

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 89.7 bits (221), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 1   MNSLVGFRFYPTDEEII-RLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEV 59
           +N   GFRF+PTD+E++   L +K       V  I E+D Y F+PW+LP  +   + E  
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE-- 70
Query: 60  WYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASK 119
           WYFF   D KY    R NR    G WK TG    +  +  T  +G K+ L F     A +
Sbjct: 71  WYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRT--LGIKKALVFYA-GKAPR 127
Query: 120 KAKTEWVMHEIAVEDDPDYKK----------DFVVCRLERKR 151
             KT+W+MHE  + D                D+V+CRL  K+
Sbjct: 128 GVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
1ut7_A	171	No apical meristem protein; transcription regulati	5e-44
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	3e-43

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  143 bits (363), Expect = 5e-44
 Identities = 57/153 (37%), Positives = 75/153 (49%), Gaps = 11/153 (7%)

Query: 5   VGFRFYPTDEEIIRL-LKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
            GFRFYPTDEE++   L +K     F +  I EID Y F+PW LP  +    +E  WYFF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFF 76

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
              D KY    R NR    G WK TG    I      + +G K+ L F     A K  KT
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVF-YIGKAPKGTKT 133

Query: 124 EWVMHEIAVEDDPDY-----KKDFVVCRLERKR 151
            W+MHE  + +           D+V+CR+ +K+
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  141 bits (358), Expect = 3e-43
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 16/160 (10%)

Query: 5   VGFRFYPTDEEIIRL-LKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
            GFRF+PTD+E++   L +K       V  I E+D Y F+PW+LP  +   + E  WYFF
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE--WYFF 74

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
              D KY    R NR    G WK TG    +        +G K+ L F     A +  KT
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKALVF-YAGKAPRGVKT 131

Query: 124 EWVMHEIAVEDDPDYKK----------DFVVCRLERKREK 153
           +W+MHE  + D                D+V+CRL  K+ +
Sbjct: 132 DWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=7.5e-56  Score=353.74  Aligned_cols=147  Identities=37%  Similarity=0.727  Sum_probs=131.0

Q ss_pred             CCCCCCceeCCCHHHHHH-HHHHhhcCCCCCccceEeccCCCCCCCCCCCCCcccCCcceEEEeecccccccCCCcceec
Q 040419            1 MNSLVGFRFYPTDEEIIR-LLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRG   79 (198)
Q Consensus         1 ~~lp~G~rF~PtDeELi~-yL~~ki~g~~l~~~~I~~~Dvy~~~P~~Lp~~~~~~~~~~~wyFF~~~~~~~~~g~R~~R~   79 (198)
                      ++|||||||+|||||||. ||++|+.|.+++..+|+++|||.+|||+||+.+..+  +.+||||+++.+++++|.|++|+
T Consensus        13 ~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g--~~ewYFFs~r~~ky~~g~R~nR~   90 (174)
T 3ulx_A           13 LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG--AREWYFFTPRDRKYPNGSRPNRA   90 (174)
T ss_dssp             TTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSC--SSEEEEEEECCC-----CCSCEE
T ss_pred             cCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccC--CceEEEEeccccccCCCCCceee
Confidence            579999999999999999 999999999999999999999999999999887653  78999999999999999999999


Q ss_pred             cCCceEEecCCCceEEeCCCCeEEEEEEEEEeeeecCCCCCCccCeEEEEEEeCCCCC----------CCCCeEEEEEEE
Q 040419           80 TNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPD----------YKKDFVVCRLER  149 (198)
Q Consensus        80 ~~~G~W~~~g~~~~I~~~~~g~viG~k~~l~F~~~g~~~~~~kT~W~M~EY~l~~~~~----------~~~~~VLCkV~~  149 (198)
                      +++|+||++|+++.|...  |.+||+|++|+|| .|+++++.+|+|+||||+|.....          ..++|||||||+
T Consensus        91 t~~G~WkatG~dk~I~~~--g~~vG~KktLvFy-~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~  167 (174)
T 3ulx_A           91 AGNGYWKATGADKPVAPR--GRTLGIKKALVFY-AGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYN  167 (174)
T ss_dssp             ETTEEEEECSCCEEECCS--SSCCEEEEEEEEE-ESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEE
T ss_pred             cCCceEccCCCCcEEeeC--CcEEEEEEEEEEe-cCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEE
Confidence            999999999999999875  5899999999999 999999999999999999998643          157899999999


Q ss_pred             cCC
Q 040419          150 KRE  152 (198)
Q Consensus       150 k~~  152 (198)
                      |+.
T Consensus       168 K~~  170 (174)
T 3ulx_A          168 KKN  170 (174)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            875

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2.8e-55  Score=350.02  Aligned_cols=148  Identities=39%  Similarity=0.722  Sum_probs=128.1

Q ss_pred             CCCCCCceeCCCHHHHHH-HHHHhhcCCCCCccceEeccCCCCCCCCCCCCCcccCCcceEEEeecccccccCCCcceec
Q 040419            1 MNSLVGFRFYPTDEEIIR-LLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRG   79 (198)
Q Consensus         1 ~~lp~G~rF~PtDeELi~-yL~~ki~g~~l~~~~I~~~Dvy~~~P~~Lp~~~~~~~~~~~wyFF~~~~~~~~~g~R~~R~   79 (198)
                      +.|||||||+|||||||. ||++|+.|.+++..+|+++|||.+|||+||+.+..+  +.+||||+++.+++++|.|++|+
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g--~~ewyFFs~r~~k~~~g~R~~R~   92 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNRV   92 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC--SSEEEEEEECCC-------CCEE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcC--CccEEEEeccccccCCCCccccc
Confidence            479999999999999999 999999999999999999999999999999876543  78999999999999999999999


Q ss_pred             cCCceEEecCCCceEEeCCCCeEEEEEEEEEeeeecCCCCCCccCeEEEEEEeCCCCC-----CCCCeEEEEEEEcCCc
Q 040419           80 TNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPD-----YKKDFVVCRLERKREK  153 (198)
Q Consensus        80 ~~~G~W~~~g~~~~I~~~~~g~viG~k~~l~F~~~g~~~~~~kT~W~M~EY~l~~~~~-----~~~~~VLCkV~~k~~~  153 (198)
                      +++|+||++|+++.|...  +.+||+|++|+|| .++++++.+|+|+||||+|.....     ..++|||||||+|+..
T Consensus        93 t~~G~Wk~tG~~k~I~~~--~~~vG~KktLvFy-~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           93 AGSGYWKATGTDKIISTE--GQRVGIKKALVFY-IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             ETTEEEEEEEEEEEEEET--TEEEEEEEEEEEE-ESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             CCCCEEeccCCCceEEec--CcEEEEEEEEEEE-cCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            999999999999999986  4899999999999 999999999999999999998752     2689999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	198
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	8e-36

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  121 bits (304), Expect = 8e-36
 Identities = 57/153 (37%), Positives = 76/153 (49%), Gaps = 11/153 (7%)

Query: 5   VGFRFYPTDEEIIR-LLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFF 63
            GFRFYPTDEE++   L +K     F +  I EID Y F+PW LP  +    +E  WYFF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFF 76

Query: 64  CEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKT 123
              D KY    R NR    G WK TG    I  +   + +G K+ L F     A K  KT
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGK-APKGTKT 133

Query: 124 EWVMHEIAVEDDPDY-----KKDFVVCRLERKR 151
            W+MHE  + +           D+V+CR+ +K+
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.2e-54  Score=341.11  Aligned_cols=146  Identities=39%  Similarity=0.732  Sum_probs=126.4

Q ss_pred             CCCCCCceeCCCHHHHHH-HHHHhhcCCCCCccceEeccCCCCCCCCCCCCCcccCCcceEEEeecccccccCCCcceec
Q 040419            1 MNSLVGFRFYPTDEEIIR-LLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRG   79 (198)
Q Consensus         1 ~~lp~G~rF~PtDeELi~-yL~~ki~g~~l~~~~I~~~Dvy~~~P~~Lp~~~~~~~~~~~wyFF~~~~~~~~~g~R~~R~   79 (198)
                      |+|||||||+|||||||. ||++||.|.+++.++|+++|||+++||+||+....  ++++||||+++++++++|.|++|+
T Consensus        15 l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~--~~~~wyFft~~~~k~~~g~r~~R~   92 (166)
T d1ut7a_          15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF--GEKEWYFFSPRDRKYPNGSRPNRV   92 (166)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSS--CSSEEEEEEECCC-------CCEE
T ss_pred             ccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhcc--CcceEEEEeeeccccCCCCccccc
Confidence            689999999999999999 99999999999999999999999999999986554  378899999999999999999999


Q ss_pred             cCCceEEecCCCceEEeCCCCeEEEEEEEEEeeeecCCCCCCccCeEEEEEEeCCCCCC-----CCCeEEEEEEEcC
Q 040419           80 TNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAVEDDPDY-----KKDFVVCRLERKR  151 (198)
Q Consensus        80 ~~~G~W~~~g~~~~I~~~~~g~viG~k~~l~F~~~g~~~~~~kT~W~M~EY~l~~~~~~-----~~~~VLCkV~~k~  151 (198)
                      +++|+|+++|+.+.|.+.  |.+||+|++|+|| .++.+++.+|+|+||||+|.+....     .++|||||||+|+
T Consensus        93 ~g~G~Wk~~g~~~~i~~~--g~~vG~kk~l~fy-~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          93 AGSGYWKATGTDKIISTE--GQRVGIKKALVFY-IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             ETTEEEEEEEEEEEEEET--TEEEEEEEEEEEE-ESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             cCCCEecccCCCceEecC--CcEEEEEEEEEEE-ecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            999999999999988764  5899999999999 8999999999999999999887543     5789999999884