Citrus Sinensis ID: 040445

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
LFIVSSSAADSNGSDRRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVTKL
cEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHccccEEEEcccccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHccccHHHHHcccccccccEEEccccccEEEEEEEcccccEEEEEEccccccccccccEEEEEEcEEEccEEEEEEccccEEEEEEEEcccc
cEEEEEcHHHHccccHHHHHHccccccccEEEEcHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHcccEEEEEcccccccccccccccccEcccccccHHHHHHHHHHcccccccccHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHcHHHcccEEEccccccccHHHHHHHHHHHHccHHHcEccEEEEccccccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHccHHHHHHHcEEccEEEEEEEcccccEEEEEEEcccccEEEEEEHHHccccccHHHHHccccccccccEEEEEEccccEEEEEEEccccc
lfivsssaadsngsdrrnllsnglgltppmgwnswnhfhCQINEKIIREtddcwgessrdsqislSCSFHMFDSLTqiaakplpnqcqgnlvankttfpsgtKALADYVHILISNsldnriesnIAFEQgidylkydncfnddtrptiRYRAMSDALKkagrpiffsmcewgdmrpalwgsnirnswrttddiSDSWARMLTIADMNEVyadhakpggwndpdmlevgnggmkyNEYVVHFSIWAIskaplllgcdvgnltaetmpiigNEEVIAVNQAIndqqiwagplsgNRIVVLLESRKTFSSMMTAHwddigiksnntlfehrTLETKFqgkltakvdghsckmyeltpvtkl
lfivsssaadsngsdrRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEqgidylkydncFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRpalwgsnirnswrttddiSDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFqgkltakvdghsckmyeltpvtkl
LFIVSSSAADSNGSDRRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVTKL
**********************GLGLTPPMGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYE*******
LFIVSSSAADSNGSDRRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVTK*
***************RRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRETDD*********QISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVTKL
LFIVSSSAADSNGSDRRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTPV***
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LFIVSSSAADSNGSDRRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNSLDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVTKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query358 2.2.26 [Sep-21-2011]
Q42656378 Alpha-galactosidase OS=Co N/A no 0.871 0.825 0.458 2e-91
P14749411 Alpha-galactosidase OS=Cy N/A no 0.871 0.759 0.447 3e-88
Q9FXT4417 Alpha-galactosidase OS=Or yes no 0.854 0.733 0.451 2e-86
Q55B10385 Probable alpha-galactosid yes no 0.868 0.807 0.352 1e-53
A4DA70 648 Probable alpha-galactosid yes no 0.899 0.496 0.329 2e-46
B0YEK2 648 Probable alpha-galactosid N/A no 0.899 0.496 0.329 2e-46
Q9URZ0436 Alpha-galactosidase mel1 yes no 0.818 0.672 0.339 1e-45
Q99172469 Alpha-galactosidase OS=Zy N/A no 0.798 0.609 0.349 2e-45
A1D9S3 648 Probable alpha-galactosid N/A no 0.899 0.496 0.323 7e-45
Q0CVX4 655 Probable alpha-galactosid N/A no 0.946 0.517 0.325 5e-44
>sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1 Back     alignment and function desciption
 Score =  336 bits (861), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 180/393 (45%), Positives = 226/393 (57%), Gaps = 81/393 (20%)

Query: 16  RRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGE 56
           RR+LL+NGLGLTPPMGWNSWNHF C ++EK+IRET                   DDCW E
Sbjct: 12  RRSLLANGLGLTPPMGWNSWNHFRCNLDEKLIRETADAMVSKGLAALGYKYINLDDCWAE 71

Query: 57  SSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHI----- 111
            +RDSQ                          GNLV   +TFPSG KALADYVH      
Sbjct: 72  LNRDSQ--------------------------GNLVPKGSTFPSGIKALADYVHSKGLKL 105

Query: 112 -------------LISNSLDNRIESNIAFEQ-GIDYLKYDNCFNDDTRPTIRYRAMSDAL 157
                         +  SL +  +    F   G+DYLKYDNC N++  P  RY  MS AL
Sbjct: 106 GIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCNNNNISPKERYPIMSKAL 165

Query: 158 KKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPG 217
             +GR IFFS+CEWG+  PA W   + NSWRTT DI DSW+ M + ADMN+ +A +A PG
Sbjct: 166 LNSGRSIFFSLCEWGEEDPATWAKEVGNSWRTTGDIDDSWSSMTSRADMNDKWASYAGPG 225

Query: 218 GWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVN 277
           GWNDPDMLEVGNGGM   EY  HFSIWA++KAPLL+GCD+ ++   T  ++ N EVIAVN
Sbjct: 226 GWNDPDMLEVGNGGMTTTEYRSHFSIWALAKAPLLIGCDIRSMDGATFQLLSNAEVIAVN 285

Query: 278 Q-----------AINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNT--- 323
           Q              D ++WAGPLSG R+ V L +R + ++ +TA+W D+G+ S      
Sbjct: 286 QDKLGVQGNKVKTYGDLEVWAGPLSGKRVAVALWNRGSSTATITAYWSDVGLPSTAVVNA 345

Query: 324 --LFEHRTLETKFQGKLTAKVDGHSCKMYELTP 354
             L+ H T E   +G+++A VD H  KMY LTP
Sbjct: 346 RDLWAHST-EKSVKGQISAAVDAHDSKMYVLTP 377
Preferentially cleaves alpha-1,3 and alpha-1,4 glycoside linkages. Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Can cleave terminal alpha-1,3-linked galactose residues responsible for blood group B specificity from the surface of erythrocytes thereby converting these cells serologically to group O.
Coffea arabica (taxid: 13443)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 2
>sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1 Back     alignment and function description
>sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1 Back     alignment and function description
>sp|Q55B10|AGAL_DICDI Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1 Back     alignment and function description
>sp|A4DA70|AGALD_ASPFU Probable alpha-galactosidase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|B0YEK2|AGALD_ASPFC Probable alpha-galactosidase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|Q9URZ0|AGAL_SCHPO Alpha-galactosidase mel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mel1 PE=3 SV=1 Back     alignment and function description
>sp|Q99172|MEL_ZYGCI Alpha-galactosidase OS=Zygosaccharomyces cidri GN=MEL PE=3 SV=1 Back     alignment and function description
>sp|A1D9S3|AGALD_NEOFI Probable alpha-galactosidase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=aglD PE=3 SV=1 Back     alignment and function description
>sp|Q0CVX4|AGALD_ASPTN Probable alpha-galactosidase D OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=aglD PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
255544181408 alpha-galactosidase/alpha-n-acetylgalact 0.851 0.747 0.580 1e-119
255544185415 alpha-galactosidase/alpha-n-acetylgalact 0.849 0.732 0.576 1e-117
15241601410 alpha-galactosidase 1 [Arabidopsis thali 0.910 0.795 0.505 1e-108
20260602410 alpha-galactosidase-like protein [Arabid 0.910 0.795 0.505 1e-108
255544191412 alpha-galactosidase/alpha-n-acetylgalact 0.871 0.757 0.530 1e-108
225463807408 PREDICTED: alpha-galactosidase [Vitis vi 0.871 0.764 0.520 1e-107
377655463412 alpha-galactosidase [Chimonanthus praeco 0.885 0.769 0.513 1e-107
356532145410 PREDICTED: alpha-galactosidase-like [Gly 0.879 0.768 0.526 1e-106
356568242410 PREDICTED: alpha-galactosidase-like [Gly 0.879 0.768 0.526 1e-106
297810943430 alpha-galactosidase 1 [Arabidopsis lyrat 0.871 0.725 0.507 1e-106
>gi|255544181|ref|XP_002513153.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] gi|223548164|gb|EEF49656.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/386 (58%), Positives = 258/386 (66%), Gaps = 81/386 (20%)

Query: 27  TPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRDSQISLSC 67
           TPPMGWNSWNHFHCQINE +I+ET                   DDCWGES RD Q     
Sbjct: 49  TPPMGWNSWNHFHCQINETVIKETADALVSTGLAKLGYLYVNIDDCWGESKRDRQ----- 103

Query: 68  SFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVH-------ILISNSL--- 117
                                GNL ANKTTFPSG KA+ADYVH       I     L   
Sbjct: 104 ---------------------GNLEANKTTFPSGIKAVADYVHSKGLKLGIYADAGLRTC 142

Query: 118 DNRIESNIAFEQ---------GIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSM 168
             R+  ++  E+         GIDYLKYDNC+N+DT+PT+RY+ MSDALKK GR IFFS+
Sbjct: 143 TGRVPGSLGHEEQDAATFASWGIDYLKYDNCYNNDTKPTVRYKVMSDALKKTGRSIFFSL 202

Query: 169 CEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVG 228
           CEWGDM PALWG +I NSWRTTDDISDSW  ML IADMN+VYAD+AKPGGWNDPDMLEVG
Sbjct: 203 CEWGDMSPALWGGDIGNSWRTTDDISDSWESMLKIADMNQVYADYAKPGGWNDPDMLEVG 262

Query: 229 NGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQ---------- 278
           NGGMKY+EYVVHFSIWAISKAPLLLGCDV ++T ETM II NEEVI +NQ          
Sbjct: 263 NGGMKYSEYVVHFSIWAISKAPLLLGCDVRSMTDETMQIISNEEVIGINQDSLGVQAKKV 322

Query: 279 -AINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTL------FEHRTLE 331
               ++ IWAGPLSGNRIV+LL +RK + S MTAHWDDIGI  N+TL      +EH+TL 
Sbjct: 323 RMEGERDIWAGPLSGNRIVILLVNRKKYKSTMTAHWDDIGITPNHTLVEARDVWEHQTLT 382

Query: 332 TKFQGKLTAKVDGHSCKMYELTPVTK 357
           T+FQ KLT  VD  +CK+Y LTP+++
Sbjct: 383 TQFQDKLTTDVDPRACKLYVLTPISQ 408

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255544185|ref|XP_002513155.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] gi|223548166|gb|EEF49658.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15241601|ref|NP_196455.1| alpha-galactosidase 1 [Arabidopsis thaliana] gi|10178280|emb|CAC08338.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gi|332003909|gb|AED91292.1| alpha-galactosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|20260602|gb|AAM13199.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gi|30725668|gb|AAP37856.1| At5g08380 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255544191|ref|XP_002513158.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] gi|223548169|gb|EEF49661.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225463807|ref|XP_002270791.1| PREDICTED: alpha-galactosidase [Vitis vinifera] gi|297742709|emb|CBI35343.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|377655463|gb|AFB73771.1| alpha-galactosidase [Chimonanthus praecox] Back     alignment and taxonomy information
>gi|356532145|ref|XP_003534634.1| PREDICTED: alpha-galactosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356568242|ref|XP_003552322.1| PREDICTED: alpha-galactosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|297810943|ref|XP_002873355.1| alpha-galactosidase 1 [Arabidopsis lyrata subsp. lyrata] gi|297319192|gb|EFH49614.1| alpha-galactosidase 1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
TAIR|locus:2150778410 AGAL1 "alpha-galactosidase 1" 0.930 0.812 0.514 7.8e-94
UNIPROTKB|Q7XIV4425 OJ1409_C08.26 "Os07g0679300 pr 0.703 0.592 0.498 1.5e-77
TAIR|locus:2150763396 AGAL2 "alpha-galactosidase 2" 0.955 0.863 0.442 2.7e-75
UNIPROTKB|Q9FXT4417 LOC_Os10g35110 "Alpha-galactos 0.916 0.786 0.444 9.3e-75
TAIR|locus:2078416437 AT3G56310 [Arabidopsis thalian 0.815 0.668 0.474 1.1e-71
UNIPROTKB|Q23YJ0382 TTHERM_01181990 "Melibiase fam 0.938 0.879 0.395 7.9e-62
UNIPROTKB|Q23DW6381 TTHERM_00043770 "Alpha-galacto 0.701 0.658 0.465 2.7e-61
UNIPROTKB|Q9S2C9 680 Q9S2C9 "Probable secreted alph 0.765 0.402 0.396 8.7e-49
DICTYBASE|DDB_G0271490385 melA "putative alpha-galactosi 0.706 0.657 0.408 2.9e-48
UNIPROTKB|Q0IWR6138 Os10g0492900 "Os10g0492900 pro 0.382 0.992 0.644 3.8e-46
TAIR|locus:2150778 AGAL1 "alpha-galactosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 193/375 (51%), Positives = 248/375 (66%)

Query:    16 RRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGE 56
             RR+LL+NGLG+TPPMGWNSWNHF C I+EK+I+ET                   DDCW E
Sbjct:    42 RRHLLTNGLGVTPPMGWNSWNHFSCNIDEKMIKETADALVTTGLSKLGYNYVNIDDCWAE 101

Query:    57 SSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHILISNS 116
              SRDS+ SL      F S  +  A  + ++     + +   + + +K +        S  
Sbjct:   102 ISRDSKGSLVPKKSTFPSGIKAVADYVHSKGLKLGIYSDAGYFTCSKTMPG------SLG 155

Query:   117 LDNRIESNIAFEQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRP 176
              +       A E GIDYLKYDNC +D ++PT+RY  M+ AL K+GRPIF S+CEWGDM P
Sbjct:   156 YEEHDAKTFA-EWGIDYLKYDNCNSDGSKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHP 214

Query:   177 ALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNE 236
             ALWGS + NSWRTT+DI D+W  M++IADMNEVYA+HA+PGGWNDPDMLEVGNGGM  +E
Sbjct:   215 ALWGSPVGNSWRTTNDIKDTWLSMISIADMNEVYAEHARPGGWNDPDMLEVGNGGMTKDE 274

Query:   237 YVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQAIN-----------DQQI 285
             Y+VHFSIWAISKAPLLLGCD+ N+T ETM I+ N+EVIA+NQ  +           D ++
Sbjct:   275 YIVHFSIWAISKAPLLLGCDIRNMTKETMEIVANKEVIAINQDPHGVQAKKVRMEGDLEV 334

Query:   286 WAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNT-----LFEHRTLETKFQGKLTA 340
             WAGPLSG R+ +LL +R    + +TA W+DI I +N+      L+EH+TL+ KF G LTA
Sbjct:   335 WAGPLSGYRVALLLLNRGPSRTSITALWEDIEIPANSIVEARDLWEHQTLKQKFVGNLTA 394

Query:   341 KVDGHSCKMYELTPV 355
              VD H+CK+Y L PV
Sbjct:   395 TVDSHACKLYVLKPV 409
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004557 "alpha-galactosidase activity" evidence=ISS;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005737 "cytoplasm" evidence=IBA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009311 "oligosaccharide metabolic process" evidence=IBA
GO:0016139 "glycoside catabolic process" evidence=IBA
GO:0046477 "glycosylceramide catabolic process" evidence=IBA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
UNIPROTKB|Q7XIV4 OJ1409_C08.26 "Os07g0679300 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2150763 AGAL2 "alpha-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FXT4 LOC_Os10g35110 "Alpha-galactosidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2078416 AT3G56310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q23YJ0 TTHERM_01181990 "Melibiase family protein" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q23DW6 TTHERM_00043770 "Alpha-galactosidase, putative" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q9S2C9 Q9S2C9 "Probable secreted alpha-galactosidase" [Streptomyces coelicolor A3(2) (taxid:100226)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271490 melA "putative alpha-galactosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q0IWR6 Os10g0492900 "Os10g0492900 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q55B10AGAL_DICDI3, ., 2, ., 1, ., 2, 20.35270.86870.8077yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.22LOW CONFIDENCE prediction!
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AtAGAL1
AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds; Arabidopsis thaliana ALPHA-GALACTOSIDASE 1 (AtAGAL1); FUNCTIONS IN- alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN- carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN- apoplast, cell wall, plant-type cell wall; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Aldolase-type TIM barrel (InterPro-IPR013785 [...] (410 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT3G56310
alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, put [...] (437 aa)
  •• •••0.907
AtAGAL2
AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase [...] (396 aa)
  •  • •0.902
MGD2
MGD2; 1,2-diacylglycerol 3-beta-galactosyltransferase/ UDP-galactosyltransferase/ transferase, [...] (468 aa)
     •  0.899
AT5G11720
alpha-glucosidase 1 (AGLU1); alpha-glucosidase 1 (AGLU1); FUNCTIONS IN- hydrolase activity, hyd [...] (902 aa)
     •  0.899
MGD1
MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1); 1,2-diacylglycerol 3-beta-galactosyltransferas [...] (533 aa)
     •  0.899
AtSTS
AtSTS (Arabidopsis thaliana stachyose synthase); galactinol-raffinose galactosyltransferase/ hy [...] (876 aa)
     •  0.899
HEXO1
HEXO1 (BETA-HEXOSAMINIDASE 1); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyz [...] (541 aa)
     •  0.899
AT3G54440
glycoside hydrolase family 2 protein; glycoside hydrolase family 2 protein; FUNCTIONS IN- carbo [...] (1108 aa)
     •  0.899
BGAL2
BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding; beta-galactosidase [...] (727 aa)
     •  0.899
AT3G45940
alpha-xylosidase, putative; alpha-xylosidase, putative; FUNCTIONS IN- hydrolase activity, hydro [...] (868 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
PLN02692412 PLN02692, PLN02692, alpha-galactosidase 1e-152
PLN02808386 PLN02808, PLN02808, alpha-galactosidase 1e-131
PLN02229427 PLN02229, PLN02229, alpha-galactosidase 1e-121
PLN03231357 PLN03231, PLN03231, putative alpha-galactosidase; 1e-12
pfam02065395 pfam02065, Melibiase, Melibiase 3e-11
PLN02899 633 PLN02899, PLN02899, alpha-galactosidase 4e-11
>gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase Back     alignment and domain information 
 Score =  435 bits (1120), Expect = e-152
 Identities = 212/404 (52%), Positives = 257/404 (63%), Gaps = 86/404 (21%)

Query: 10  DSNGSDRRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET------------------- 50
           D +   RRNLL+NGLG+TPPMGWNSWNHF C+I+EK+I+ET                   
Sbjct: 38  DDSEILRRNLLANGLGITPPMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNI 97

Query: 51  DDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVH 110
           DDCW E +RD +                          GNLV  K+TFPSG KALADYVH
Sbjct: 98  DDCWAEIARDEK--------------------------GNLVPKKSTFPSGIKALADYVH 131

Query: 111 ILISNSLDNRIESNIAF----------------------EQGIDYLKYDNCFNDDTRPTI 148
              S  L   I S+  +                        GIDYLKYDNC ND ++PT+
Sbjct: 132 ---SKGLKLGIYSDAGYFTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDNCNNDGSKPTV 188

Query: 149 RYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNE 208
           RY  M+ AL KAGRPIFFS+CEWGDM PALWGS + NSWRTT+DISD+W  M++ ADMNE
Sbjct: 189 RYPVMTRALMKAGRPIFFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMNE 248

Query: 209 VYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPII 268
           VYA+ A+PGGWNDPDMLEVGNGGM  +EY+VHFSIWAISKAPLLLGCDV N+T ETM I+
Sbjct: 249 VYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIV 308

Query: 269 GNEEVIAVNQ-----------AINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIG 317
            N+EVIAVNQ              D +IWAGPLSG R+ +LL +R  + + +TA+WDDIG
Sbjct: 309 ANKEVIAVNQDPLGVQAKKVRMEGDLEIWAGPLSGYRVALLLLNRGPWRNSITANWDDIG 368

Query: 318 IKSNNT-----LFEHRTLETKFQGKLTAKVDGHSCKMYELTPVT 356
           I +N+      L+EH+TL+  F G LTA VD H+CKMY L P++
Sbjct: 369 IPANSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPIS 412

Length = 412
>gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|178770 PLN03231, PLN03231, putative alpha-galactosidase; Provisional Back     alignment and domain information
>gnl|CDD|216861 pfam02065, Melibiase, Melibiase Back     alignment and domain information
>gnl|CDD|178487 PLN02899, PLN02899, alpha-galactosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 358
PLN02229427 alpha-galactosidase 100.0
PLN02692412 alpha-galactosidase 100.0
PLN02808386 alpha-galactosidase 100.0
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 100.0
PLN02899633 alpha-galactosidase 100.0
PLN03231357 putative alpha-galactosidase; Provisional 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 99.95
PLN02219 775 probable galactinol--sucrose galactosyltransferase 99.88
PLN02355758 probable galactinol--sucrose galactosyltransferase 99.87
PLN02684750 Probable galactinol--sucrose galactosyltransferase 99.84
PF05691747 Raffinose_syn: Raffinose synthase or seed imbibiti 99.83
PLN02711777 Probable galactinol--sucrose galactosyltransferase 99.8
PLN02982865 galactinol-raffinose galactosyltransferase/ghydrol 99.63
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 99.56
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.06
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 98.43
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 98.24
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 97.7
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 97.64
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 97.63
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 97.59
PRK10658665 putative alpha-glucosidase; Provisional 97.57
cd06600317 GH31_MGAM-like This family includes the following 97.56
cd06595292 GH31_xylosidase_XylS-like This family represents a 97.44
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 97.42
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 97.39
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 97.36
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 97.29
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 96.94
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 96.9
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 96.79
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 96.52
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 95.71
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 95.35
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 94.77
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 93.66
PRK10426635 alpha-glucosidase; Provisional 93.62
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 92.86
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 91.7
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 91.35
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 88.5
smart0063281 Aamy_C Aamy_C domain. 85.55
PF14509103 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomer 84.84
PF0926091 DUF1966: Domain of unknown function (DUF1966); Int 81.94
PF06964177 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-termin 81.54
>PLN02229 alpha-galactosidase Back     alignment and domain information 
Probab=100.00  E-value=8.1e-97  Score=730.11  Aligned_cols=315  Identities=58%  Similarity=1.030  Sum_probs=296.2

Q ss_pred             ccccccCCCCCCCceeeeCcccccCChhhhHHHhc-------------------CcccccCCCCCcccccccccccchhh
Q 040445           16 RRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRDSQISLSCSFHMFDSLT   76 (358)
Q Consensus        16 ~~~~~~~~~a~~PpmGWnSW~~~~~~i~e~~i~~~-------------------DdgW~~~~rd~~~~~~~~~~~~~~~~   76 (358)
                      ....++||+++||||||||||+|+|+|||+.|+++                   ||||+...||..              
T Consensus        51 ~~~~~~ngla~tPpmGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~--------------  116 (427)
T PLN02229         51 GRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSK--------------  116 (427)
T ss_pred             hhhhccCCccCCCCceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCC--------------
Confidence            44567899999999999999999999999999998                   999998767665              


Q ss_pred             hhccCCCCCCCCCceeecCCCCCCChHHHHHHHHHH------cC-----------CchhhHHHHHHHH-hhCccEEEeec
Q 040445           77 QIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHIL------IS-----------NSLDNRIESNIAF-EQGIDYLKYDN  138 (358)
Q Consensus        77 ~~~~~~~~~d~~G~~~~~~~~FP~Glk~l~d~ih~~------Y~-----------Gs~~~~~~da~~f-~WGvDylK~D~  138 (358)
                                  |+++||++|||+|||+|+||||+|      |+           ||++||++||++| +|||||||+|+
T Consensus       117 ------------G~l~~d~~rFP~G~k~ladyiH~~GlKfGIy~d~G~~TC~~~pGS~g~e~~DA~~fA~WGVDylK~D~  184 (427)
T PLN02229        117 ------------GQLVPDPKTFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDN  184 (427)
T ss_pred             ------------CCEEEChhhcCCcHHHHHHHHHHCCCceEEeccCCCcccCCCCCCccHHHHHHHHHHHcCCCEEEecC
Confidence                        999999999999999999999999      43           9999999999999 99999999999


Q ss_pred             CCCCCCchhHHHHHHHHHHHHhCCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCCC
Q 040445          139 CFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGG  218 (358)
Q Consensus       139 c~~~~~~~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~  218 (358)
                      |+......+++|..|++||+++||||+||+|+||...|+.|..+++|+||++.||++.|.++.++++.+..|+.+++||+
T Consensus       185 C~~~~~~~~~~y~~m~~AL~~tGRpI~~SlC~WG~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~i~~~~~~~~~~agPG~  264 (427)
T PLN02229        185 CYNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWASMTTIADLNNKWAAYAGPGG  264 (427)
T ss_pred             CCCCCcchhHHHHHHHHHHHhhCCCcEEEecCCCCCCHHHHHHhhcCeeeccCCcccccccHHHHHHHHHHHHhhcCCCC
Confidence            99876778899999999999999999999999999889999999999999999999999999999999999999999999


Q ss_pred             CCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc-----------C---CCeE
Q 040445          219 WNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA-----------I---NDQQ  284 (358)
Q Consensus       219 wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd-----------~---~~~~  284 (358)
                      |||||||+||+.+||.+|+||||+||||++||||+|+||++|++++++||+|+||||||||           .   +..+
T Consensus       265 wnDpDML~vGn~glT~~E~rthfsLWai~~SPLiiG~DL~~m~~~tl~ILtNkEVIAINQD~lG~qg~~v~~~~~~~~~~  344 (427)
T PLN02229        265 WNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETMEILSNKEVIAVNQDPLGVQGRKIQANGKNGCQQ  344 (427)
T ss_pred             CCCCCeeeeCCCCCCHHHHHHHHHHHHHHhCceeecCCcccCCHHHHHHhcCHHHHhhcccccccCcEEEEecCCCCceE
Confidence            9999999999999999999999999999999999999999999999999999999999999           1   2379


Q ss_pred             EEEEEcCCCcEEEEEEeCCCCceEEEEEcccccccccc-----ccccCcccceeecceEEEEEcCCcEEEEEEeecc
Q 040445          285 IWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNN-----TLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVT  356 (358)
Q Consensus       285 vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~-----DlW~g~~~~g~~~g~~~~~l~ph~~~llrl~~~~  356 (358)
                      ||+++|++|++||+|||+++++++++++|++|||++..     |||+++++++.++++|+++|+||+|+|||+++..
T Consensus       345 vW~~~L~~g~~aValfN~~~~~~~v~v~~~~lGl~~~~~~~VrDLW~~~dlg~~~~~~~~~~v~~Hg~~l~rl~~~~  421 (427)
T PLN02229        345 VWAGPLSGDRLVVALWNRCSEPATITASWDVIGLESSISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYIFTPQT  421 (427)
T ss_pred             EEEEECCCCCEEEEEEeCCCCCEEEEEEHHHcCCCCCCceEEEECCCCCccCccccceEEEEECCCeEEEEEEeccc
Confidence            99999999999999999999999999999999997752     9999999844578899999999999999999863

>PLN02692 alpha-galactosidase Back     alignment and domain information
>PLN02808 alpha-galactosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>PF14509 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomerisation; PDB: 3A24_A 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A Back     alignment and domain information
>PF09260 DUF1966: Domain of unknown function (DUF1966); InterPro: IPR015340 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals Back     alignment and domain information
>PF06964 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-terminus; InterPro: IPR010720 This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
1uas_A362 Crystal Structure Of Rice Alpha-Galactosidase Lengt 1e-87
3a5v_A397 Crystal Structure Of Alpha-Galactosidase I From Mor 4e-54
3lrk_A479 Structure Of Alfa-Galactosidase (Mel1) From Sacchar 1e-43
3lrm_A479 Structure Of Alfa-Galactosidase From Saccharomyces 8e-43
1ktb_A405 The Structure Of Alpha-N-Acetylgalactosaminidase Le 8e-34
1r46_A398 Structure Of Human Alpha-galactosidase Length = 398 1e-32
3lx9_A404 Interconversion Of Human Lysosomal Enzyme Specifici 3e-32
3h53_A400 Crystal Structure Of Human Alpha-N-Acetylgalactosam 6e-32
3hg3_A404 Human Alpha-Galactosidase Catalytic Mechanism 2. Su 9e-32
1szn_A417 The Structure Of Alpha-Galactosidase Length = 417 2e-30
3a21_A 614 Crystal Structure Of Streptomyces Avermitilis Beta- 2e-26
3cc1_A433 Crystal Structure Of A Putative Alpha-N-Acetylgalac 3e-09
>pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362 Back     alignment and structure 
Iteration: 1

 Score =  319 bits (818), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 176/390 (45%), Positives = 224/390 (57%), Gaps = 84/390 (21%)
Query: 20  LSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRD 60
             NGLG TP MGWNSWNHF+C INE+IIRET                   DDCW E SRD
Sbjct: 1   FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRD 60
Query: 61  SQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHI--------- 111
           SQ                          GN V N+ TFPSG KALADYVH          
Sbjct: 61  SQ--------------------------GNFVPNRQTFPSGIKALADYVHAKGLKLGIYS 94
Query: 112 -LISNSLDNRIESNIAFEQ---------GIDYLKYDNCFNDDTRPTI-RYRAMSDALKKA 160
              S +  N++  ++  E+         G+DYLKYDNC ND  R  + RY  MS+A+K  
Sbjct: 95  DAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNC-NDAGRSVMERYTRMSNAMKTY 153
Query: 161 GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWN 220
           G+ IFFS+CEWG   PA W   + NSWRTT DI+D+W  M + AD N+ +A +A PGGWN
Sbjct: 154 GKNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWN 213
Query: 221 DPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVN--- 277
           DPDMLEVGNGGM   EY  HFSIWA++KAPLL+GCDV +++ +T  I+ N EVIAVN   
Sbjct: 214 DPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDS 273
Query: 278 --------QAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSN-----NTL 324
                   Q+ N  ++WAGPLS NR  V+L +R+++ + +TAHW +IG+  +       L
Sbjct: 274 LGVQGKKVQSDNGLEVWAGPLSNNRKAVVLWNRQSYQATITAHWSNIGLAGSVAVTARDL 333
Query: 325 FEHRTLETKFQGKLTAKVDGHSCKMYELTP 354
           + H +     QG+++A V  H CKMY LTP
Sbjct: 334 WAHSSFAA--QGQISASVAPHDCKMYVLTP 361
>pdb|3A5V|A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea Length = 397 Back     alignment and structure
>pdb|3LRK|A Chain A, Structure Of Alfa-Galactosidase (Mel1) From Saccharomyces Cerevisiae Length = 479 Back     alignment and structure
>pdb|3LRM|A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose Length = 479 Back     alignment and structure
>pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405 Back     alignment and structure
>pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398 Back     alignment and structure
>pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404 Back     alignment and structure
>pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400 Back     alignment and structure
>pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404 Back     alignment and structure
>pdb|1SZN|A Chain A, The Structure Of Alpha-Galactosidase Length = 417 Back     alignment and structure
>pdb|3A21|A Chain A, Crystal Structure Of Streptomyces Avermitilis Beta-L- Arabinopyranosidase Length = 614 Back     alignment and structure
>pdb|3CC1|A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution Length = 433 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 7e-88
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 1e-84
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 1e-80
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 2e-80
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 5e-79
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 2e-75
1ktb_A405 Alpha-N-acetylgalactosaminidase; glycoprotein, (be 7e-75
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 3e-71
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 5e-09
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 7e-04
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 Back     alignment and structure
 Score =  275 bits (705), Expect = 7e-88
 Identities = 93/377 (24%), Positives = 143/377 (37%), Gaps = 98/377 (25%)

Query: 20  LSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRD 60
                  + PMGW SWN F  +I+  +I++                    D+ W + +RD
Sbjct: 4   TRQITVPSAPMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRD 63

Query: 61  SQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVH---------- 110
           S                           GN+  +   +P G  A+  Y+H          
Sbjct: 64  SA--------------------------GNITVDTAEWPGGMSAITAYIHSKGLKAGIYT 97

Query: 111 ---------ILISNSLDNRIESNIAFEQ---------GIDYLKYDNCFNDDTR--PTIRY 150
                       +         +              G D++K D C  D         Y
Sbjct: 98  DAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTY 157

Query: 151 RAMSDALKKA----GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDI-----SDSWARML 201
           +++SDA+ +A    GRP+  S+C WG   P  W +     WRT+ DI       S   +L
Sbjct: 158 KSISDAVGRAAATTGRPLTLSICNWGYQNPWNWAAGQAPLWRTSTDIIYYGNQPSMTSLL 217

Query: 202 TIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLT 261
           +  D   ++      G +NDPDML VG  G    +   H ++WAIS APLL G D+  +T
Sbjct: 218 SNFDQT-LHPTAQHTGYYNDPDMLMVGMDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMT 276

Query: 262 AETMPIIGNEEVIAVNQAI------------NDQQIWAGPLSGN-RIVVLLESRKTFSSM 308
           +ET  I+ N EVIAV+Q                 Q +   LSG     V+L +R + +  
Sbjct: 277 SETAGILKNPEVIAVDQDSRGLQGVKVAEDTTGLQAYGKVLSGTGNRAVVLLNRTSAAHD 336

Query: 309 MTAHWDDIGIKSNNTLF 325
           +T  W D+G+ + +   
Sbjct: 337 ITVRWSDLGLTNASATV 353
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 Back     alignment and structure
>1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405 Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404 Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 100.0
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 100.0
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 100.0
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 100.0
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 100.0
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 100.0
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 100.0
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 100.0
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 100.0
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 100.0
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 100.0
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 99.95
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 99.87
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 99.43
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 98.61
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 98.37
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 98.0
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 97.95
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 97.54
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 97.47
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 97.46
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 97.26
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 96.45
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 93.64
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 91.5
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 91.2
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 91.19
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 90.84
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 90.14
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 90.02
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 89.37
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 88.25
2yih_A524 CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca 88.18
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 87.63
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 87.07
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 86.41
2e4t_A519 Endoglucanase, xyloglucanase; TIM barrel, TIM-like 85.81
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 85.22
3ii1_A535 Cellulase; CELM2, glucanase-xyanase, glucanase, xy 84.89
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 84.74
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 84.65
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 84.2
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 83.78
2y24_A383 Xylanase; hydrolase, GH5 family, aldotetraouronic 81.82
3ug3_A504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 81.79
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 81.7
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 81.62
3ik2_A517 Endoglucanase A; TIM-like barrel, hydrolase; 2.20A 81.44
3kl0_A401 Glucuronoxylanase XYNC; alpha beta barrel, (beta/a 80.91
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
Probab=100.00  E-value=1.8e-90  Score=686.45  Aligned_cols=309  Identities=35%  Similarity=0.652  Sum_probs=279.6

Q ss_pred             ccCCCCCCCceeeeCcccccCC----------hhhhHHHhc-------------------CcccccCCCCCccccccccc
Q 040445           20 LSNGLGLTPPMGWNSWNHFHCQ----------INEKIIRET-------------------DDCWGESSRDSQISLSCSFH   70 (358)
Q Consensus        20 ~~~~~a~~PpmGWnSW~~~~~~----------i~e~~i~~~-------------------DdgW~~~~rd~~~~~~~~~~   70 (358)
                      ++||+|+||||||||||+|+|+          |||+.|+++                   ||||+...||..        
T Consensus         1 l~ngla~tppmGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~--------   72 (404)
T 3hg3_A            1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSE--------   72 (404)
T ss_dssp             CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTT--------
T ss_pred             CCCCCCCCCceEEEcHhhhccCccccccccCCcCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCC--------
Confidence            5799999999999999999999          799999887                   999998777765        


Q ss_pred             ccchhhhhccCCCCCCCCCceeecCCCCCCChHHHHHHHHHH------c-----------CCchhhHHHHHHHH-hhCcc
Q 040445           71 MFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHIL------I-----------SNSLDNRIESNIAF-EQGID  132 (358)
Q Consensus        71 ~~~~~~~~~~~~~~~d~~G~~~~~~~~FP~Glk~l~d~ih~~------Y-----------~Gs~~~~~~da~~f-~WGvD  132 (358)
                                        |+|+||++|||+|||+|++|||++      |           .||++||++|+++| +||||
T Consensus        73 ------------------G~~~~~~~kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa~WGvD  134 (404)
T 3hg3_A           73 ------------------GRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVD  134 (404)
T ss_dssp             ------------------SCCCBCTTTSTTHHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHHTCC
T ss_pred             ------------------CCeeeChhhcCCCHHHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHHHhCCc
Confidence                              999999999999999999999999      2           28999999999999 99999


Q ss_pred             EEEeecCCCCCCc-hhHHHHHHHHHHHHhCCCcEEeecCCCCCC-----c-ccccccccCEEeecCCCCCchHHHHHHHH
Q 040445          133 YLKYDNCFNDDTR-PTIRYRAMSDALKKAGRPIFFSMCEWGDMR-----P-ALWGSNIRNSWRTTDDISDSWARMLTIAD  205 (358)
Q Consensus       133 ylK~D~c~~~~~~-~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~-----p-~~w~~~~~~~wRis~Di~~~W~~~~~~~~  205 (358)
                      |||+|+|+..... ..++|.+|++||+++||||+|+ |+||...     | +.+..+++|+|||++||.+.|.++.++++
T Consensus       135 ylK~D~C~~~~~~~~~~~y~~m~~AL~~tGRpi~~s-c~w~~~~~~~~~~~~~~~~~~~n~WR~~~Di~d~W~sv~~i~~  213 (404)
T 3hg3_A          135 LLKFAGCYCDSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILD  213 (404)
T ss_dssp             EEEEECCSCSCHHHHHHHHHHHHHHHHHTTCCCEEE-ECTGGGGTTTSCCCHHHHHHHCSEEECSCCCCSSHHHHHHHHH
T ss_pred             EEEecCcCCCcchhHHHHHHHHHHHHHhcCCCEEEE-eCCCcccccccccchHHHhhhCcEEEecCCcCcchHHHHHHHH
Confidence            9999999976444 5689999999999999999999 9996321     1 12335889999999999999999999987


Q ss_pred             H----hcccccccCCCCCCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc--
Q 040445          206 M----NEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA--  279 (358)
Q Consensus       206 ~----~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd--  279 (358)
                      .    +..++.+++||+|||||||+||+.+||.+|+|||||||||++||||||+||++|++++++||+|+||||||||  
T Consensus       214 ~~~~~~~~~~~~agpG~wnDpDML~vGn~glT~~E~rthfslWai~~sPLiiG~Dl~~~~~~tl~iLtN~evIAinQD~l  293 (404)
T 3hg3_A          214 WTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPL  293 (404)
T ss_dssp             HHHHTHHHHTTTCBTTBEEECCCBCTTSSSCCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCTT
T ss_pred             HHhhhhhhhHhhcCCCCcCCCcceecCCCCCCHHHHHHHHHHHHHhcCceEecCCcccCCHHHHHHhcCHHHHhhhcccc
Confidence            4    4568889999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             ---------CCCeEEEEEEcCCCcEEEEEEeCCC--CceEEEEEcccccc---cccc-----ccccCcccceee--cceE
Q 040445          280 ---------INDQQIWAGPLSGNRIVVLLESRKT--FSSMMTAHWDDIGI---KSNN-----TLFEHRTLETKF--QGKL  338 (358)
Q Consensus       280 ---------~~~~~vw~~~l~dg~~av~l~N~~~--~~~~~tv~l~~lGl---~~~~-----DlW~g~~~~g~~--~g~~  338 (358)
                               .++.+||+++|++|++||+|||+++  ++++++++|++|||   .+..     |||+|+++ |.+  +++|
T Consensus       294 G~q~~~v~~~~~~~VW~~~l~~g~~aValfN~~~~~~~~~vtv~~~~lGl~~~~~~~~~~vrDLW~~~~l-g~~~~~~~~  372 (404)
T 3hg3_A          294 GKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKL-GFYEWTSRL  372 (404)
T ss_dssp             CCCCEEEEEETTEEEEEEECSTTCEEEEEEECCCSSSCEEEEEEGGGSGGGTTTSSEEEEEEEESSCEEE-EEEETTCEE
T ss_pred             CCcceEEEecCCeEEEEEECCCCCEEEEEEEcCCCCCceEEEEEHHHcCCcccCCCCceEEEECCCCccc-ccccccceE
Confidence                     3467999999999999999999999  89999999999999   3222     99999998 655  4789


Q ss_pred             EEEEcCCcEEEEEEeecc
Q 040445          339 TAKVDGHSCKMYELTPVT  356 (358)
Q Consensus       339 ~~~l~ph~~~llrl~~~~  356 (358)
                      +++|+||+|+||||++.+
T Consensus       373 ~~~V~pHg~~llrlt~~~  390 (404)
T 3hg3_A          373 RSHINPTGTVLLQLENTM  390 (404)
T ss_dssp             EEEECTTCEEEEEEEEHH
T ss_pred             EEEECCCeEEEEEEEcCC
Confidence            999999999999999864
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} Back     alignment and structure
>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 358
d1uasa2273 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ 1e-62
d1ktba2293 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu 2e-55
d1r46a2292 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) 4e-54
d1szna2314 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T 3e-53
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 7e-37
d1uasa189 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa 9e-15
d1szna1103 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei 8e-13
d1ktba195 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus ga 2e-11
d1r46a198 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapien 1e-08
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

 Score =  199 bits (506), Expect = 1e-62
 Identities = 141/295 (47%), Positives = 171/295 (57%), Gaps = 64/295 (21%)

Query: 22  NGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRDSQ 62
           NGLG TP MGWNSWNHF+C INE+IIRET                   DDCW E SRDSQ
Sbjct: 3   NGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQ 62

Query: 63  ISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHIL---------- 112
                                     GN V N+ TFPSG KALADYVH            
Sbjct: 63  --------------------------GNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDA 96

Query: 113 ISNSLDNRIESNIAFEQ---------GIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRP 163
            S +  N++  ++  E+         G+DYLKYDNC +       RY  MS+A+K  G+ 
Sbjct: 97  GSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKN 156

Query: 164 IFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPD 223
           IFFS+CEWG   PA W   + NSWRTT DI+D+W  M + AD N+ +A +A PGGWNDPD
Sbjct: 157 IFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPD 216

Query: 224 MLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQ 278
           MLEVGNGGM   EY  HFSIWA++KAPLL+GCDV +++ +T  I+ N EVIAVNQ
Sbjct: 217 MLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQ 271
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 89 Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 103 Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 95 Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 98 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 100.0
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 100.0
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 100.0
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 99.73
d1ktba195 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 99.69
d1szna1103 Melibiase {Trichoderma reesei [TaxId: 51453]} 99.63
d1r46a198 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 99.61
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.32
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 98.06
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 97.8
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 97.74
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 97.61
d1qw9a1130 Alpha-l-arabinofuranosidase {Bacillus stearothermo 95.38
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 94.71
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 94.43
d2c7fa1131 Alpha-l-arabinofuranosidase {Clostridium thermocel 94.26
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 93.43
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 89.17
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 88.83
d1nofa1106 Glycosyl hydrolase family 5 xylanase {Erwinia chry 87.23
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 85.36
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 83.06
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=100.00  E-value=1.7e-62  Score=462.57  Aligned_cols=234  Identities=61%  Similarity=1.086  Sum_probs=220.1

Q ss_pred             ccCCCCCCCceeeeCcccccCChhhhHHHhc-------------------CcccccCCCCCcccccccccccchhhhhcc
Q 040445           20 LSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRDSQISLSCSFHMFDSLTQIAA   80 (358)
Q Consensus        20 ~~~~~a~~PpmGWnSW~~~~~~i~e~~i~~~-------------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~   80 (358)
                      .+||||+|||||||||++|+++|||+.|+++                   ||||+...++..                  
T Consensus         1 ~~ngla~tPp~GwnsW~~~~~~i~e~~~~~~~~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~------------------   62 (273)
T d1uasa2           1 FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQ------------------   62 (273)
T ss_dssp             CCSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTT------------------
T ss_pred             CCCccCCCCCCccCcHHhhCcCCCHHHHHHHHHHHHHcCchhhCCeEEEEcCCcCCCCCCCC------------------
Confidence            4799999999999999999999999999886                   999998655443                  


Q ss_pred             CCCCCCCCCceeecCCCCCCChHHHHHHHHHH---cC---------------CchhhHHHHHHHH-hhCccEEEeecCCC
Q 040445           81 KPLPNQCQGNLVANKTTFPSGTKALADYVHIL---IS---------------NSLDNRIESNIAF-EQGIDYLKYDNCFN  141 (358)
Q Consensus        81 ~~~~~d~~G~~~~~~~~FP~Glk~l~d~ih~~---Y~---------------Gs~~~~~~da~~f-~WGvDylK~D~c~~  141 (358)
                              |+++||++|||+|||+|++|||++   |+               +++.|++.++++| +|||||||+|+|+.
T Consensus        63 --------g~~~~~~~~fP~Gl~~~~~~~~~~G~~~Glw~~~~~~~~~~~~~~~~~~~~~d~~~~~~wGvd~vK~D~~~~  134 (273)
T d1uasa2          63 --------GNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCND  134 (273)
T ss_dssp             --------SCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCC
T ss_pred             --------CCcccCccccCCChHHHHHHHHhCCCeEEEecCCcccccCCCCCcchhhHHHHHHHHHhCCCceeccccccc
Confidence                    999999999999999999999999   21               7899999999999 99999999999998


Q ss_pred             CCCchhHHHHHHHHHHHHhCCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCCCCCC
Q 040445          142 DDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWND  221 (358)
Q Consensus       142 ~~~~~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~wnD  221 (358)
                      ......++|..+.++|++++|++++++|.++...+..+..+++|+||+++|+.+.|+++..+++.+..++.+.++++|+|
T Consensus       135 ~~~~~~~~~~~~~~~l~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~g~~~~~D  214 (273)
T d1uasa2         135 AGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWND  214 (273)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCTTSEEEEESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHHHHHHHHHTTGGGCBTTBEEE
T ss_pred             cchHHHHHHHHHHHHHHHhCCCcEEeecccCCCcchhhhhhhhhhhcccCCcCcchhhHHHHHHHHHHHHHHhCCCcccC
Confidence            77778899999999999999999999999988777778889999999999999999999999998888888999999999


Q ss_pred             CCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc
Q 040445          222 PDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA  279 (358)
Q Consensus       222 pDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd  279 (358)
                      |||+++|+.++|.+|+|+||+||||++|||++|+||++++++.+++|+|+|+||||||
T Consensus       215 ~D~~~~~~~~~t~~E~rt~~al~~i~~~pL~i~~Dl~~l~~~~l~ll~N~e~IAinqd  272 (273)
T d1uasa2         215 PDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQD  272 (273)
T ss_dssp             CCCCCTTSSSSCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTC
T ss_pred             ccccccCCCCCCHHHHHHHHHHHHHHhchhhhcCCcccCCHHHHHHhcCHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999999999998
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure