Citrus Sinensis ID: 040530

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSGASNALSVNAPSQLILSVVFMASYALIASSL
Secondary Structure (PSIPRED)
ccccccccccccHHHHHcccccHHHHccccccccHHHHHHHHHHHHcccccccEEEccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHccHHHHHHHHHccccccHHcccccccccccHHHHHHHHHccccHHHEEEEccccccccEEEcHHHHHccccHccccccccccccHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mlcartmaqsdcTNVLIgmapclsyvsgssstpsaqcCSQLASVVRSNPRCLCMVlgdggsslgVSINQTLALalpgacnvqtppvsrcneaadgpdlspagppealpsddsagtgskavpstggsgasnalsvnapsqLILSVVFMASYALIASSL
Flexible Loop (DISEMBL)
MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSGASNALSVNAPSQLILSVVFMASYALIASSL
Low Complexity Region (SEG)
MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMvlgdggsslgvsINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSGASNALSVNAPSQLILSVVFMASYALIASSL
Disordered region (IsUnstruct)
*********SDCTNVLIGMAPCLSYVSG******AQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQ*******************************************************SQLILSVVFMASYALI****
Disordered Region (DISOPRED)
**************VLIGMAPCLSYVS*SSSTPS**CCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPPVSR***************************************************LILSVVFMASYALIASSL
Disordered Region (DISEMBL)
********QSDCTNVLIGMAPCLSYV***************ASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPP***********************ASNALSVNAPSQLILSVVFMASYALIASSL
Disordered Region (DISPRO)
*********SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPPVSRCNEAAD**************************************SVNAPSQLILSVVFMASYALIASSL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSGASNALSVNAPSQLILSVVFMASYALIASSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	157	2.2.26 [Sep-21-2011]
Q9ZQI8	169	Non-specific lipid-transf	no	no	0.891	0.828	0.364	1e-14
Q8VYI9	182	Non-specific lipid-transf	no	no	0.757	0.653	0.360	2e-11
Q9FFY3	151	Lipid transfer-like prote	no	no	0.420	0.437	0.369	1e-06
Q9C7F7	193	Uncharacterized GPI-ancho	no	no	0.891	0.725	0.233	1e-06
Q9ZVC7	176	Xylogen-like protein 11 O	no	no	0.573	0.511	0.351	5e-06
P55958	133	Probable non-specific lip	N/A	no	0.464	0.548	0.305	0.0001
Q6ASY2	178	Non-specific lipid transf	no	no	0.560	0.494	0.307	0.0006
Q43119	116	Non-specific lipid-transf	N/A	no	0.439	0.594	0.342	0.0007

>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 19/159 (11%)

Query: 5   RTMAQSDCTNVLIGMAPCLSYVSGSSST--PSAQCCSQLASVVRSNPRCLCMVLGDGGSS 62
           R  A  DC+++++ MA CLS+V+  S+   P   CCS L +VVR+ P CLC    + G S
Sbjct: 20  RAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG-S 78

Query: 63  LGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPS-DDSAGTGSKAVP 121
           LG++++ + A +LP  C V  PP +RC  +  G       PP   P    +AG G+ A+ 
Sbjct: 79  LGLTLDLSKAASLPSVCKVAAPPSARCGLSVSG------DPPATAPGLSPTAGAGAPAL- 131

Query: 122 STGGSGASNALSVNAP-----SQLILSVVFMASYALIAS 155
               SGA+ A  V++P     S L +S  F+   ALI+S
Sbjct: 132 ---SSGANAATPVSSPRSSDASLLSVSFAFVIFMALISS 167

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 14/133 (10%)

Query: 11  DCTNVLIGMAPCLSYVS--GSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSIN 68
           DC+ +++ MA CLS+VS  G+ + P   CCS L +V++++ +CLC       +SLGV++N
Sbjct: 42  DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAF-KSSASLGVTLN 100

Query: 69  QTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSGA 128
            T A  LP AC +  P ++ C     G  ++P+  P   P   +AG      P T G  A
Sbjct: 101 ITKASTLPAACKLHAPSIATC-----GLSVAPSTAPGLAPGVAAAG------PETAGFLA 149

Query: 129 SNALSVNAPSQLI 141
            N  S N  S LI
Sbjct: 150 PNPSSGNDGSSLI 162

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 7/73 (9%)

Query: 19  MAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSL----GVSINQTLALA 74
           +APCL+Y++G+   P   CC+ L SV+R+NP CLC ++ +  SS     G+ +N   A  
Sbjct: 36  LAPCLNYLNGTKEVPQV-CCNPLKSVIRNNPECLCRMISNRWSSQAERAGIDVND--AQM 92

Query: 75  LPGACNVQTPPVS 87
           LP  C     P++
Sbjct: 93  LPARCGEHVNPIA 105

Promotes the number of phloem (pro)cambial and pericycle cells.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)

Query: 10  SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGD---GGSSLG-V 65
            +C      +  CL + +G ++ PS +CC  +  +   +P+CLC V+     GG +L  +
Sbjct: 33  DECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDL 92

Query: 66  SINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGT------GSKA 119
            + +   + LP +C +    ++ C +      +SP+ P  A+ ++++  T       S A
Sbjct: 93  GVQEDKLIQLPTSCQLHNASITNCPKLL---GISPSSPDAAVFTNNATTTPVAPAGKSPA 149

Query: 120 VPSTGGSGASNALSVNAPSQLILSVVFMA-SYAL 152
            P+T      +A + +  + + L+V  MA S+ L
Sbjct: 150 TPATSTDKGGSASAKDGHAVVALAVALMAVSFVL 183

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVC7|XYP11_ARATH Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 11  DCTNVLIGMAPCLSYVSGSSS--TPSAQCCSQLASVVRSNPRCLCMVLGDGGS-SLGVSI 67
           +C   ++ ++ C SYV   S+   P A CC +LA +V+S+P C+C + G G S   GV +
Sbjct: 39  NCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKL 98

Query: 68  NQTLALALPGACNVQTPPVSRCNEAADGPDLSPA 101
           ++  A  L   C V+ P  S C+     P +SPA
Sbjct: 99  DKQRAEQLSTICGVKAPSPSLCS-VLGFPTISPA 131

Arabidopsis thaliana (taxid: 3702)

>sp|P55958|NLT21_PARJU Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 12/85 (14%)

Query: 12  CTNVLIGMAPCLSYVSGSSSTPSAQCCS---QLASVVRSNPR----CLCMVLGDGGSSLG 64
           C  V+  + PCL +V G    PS +CCS   +L+  V++  +    C C+V    G S  
Sbjct: 35  CGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGIS-- 92

Query: 65  VSINQTLALALPGACNVQT--PPVS 87
             I   L   +P  C+++T  PP++
Sbjct: 93  -GIKNELVAEVPKKCDIKTTLPPIT 116

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Parietaria judaica (taxid: 33127)

>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1

 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 11  DCTNVLIGMAPCLSYVS---GSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSI 67
           DCT   + +A CL YV+    + S PS  CC ++   ++ +    C+       +L + I
Sbjct: 39  DCTAEALKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLCAAFTSKTLPLPI 98

Query: 68  NQTLALALPGACNVQTPPVSRCNEAADGPDL 98
           N T AL LP AC       S+C   A  P +
Sbjct: 99  NITRALHLPAACGADASAFSKCLAPAPSPSV 129

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q43119|NLTPD_RICCO Non-specific lipid-transfer protein D, cotyledon-specific isoform OS=Ricinus communis PE=3 SV=1

 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)

Query: 12  CTNVLIGMAPCLSYVSGSSSTPSAQCCS---QLASVVRS--NPRCLCMVLGDGGSSLGVS 66
           C+ V +  A C+ + +G  S PS+ CC+   QLA  V+S  + + +C  L     SLG+ 
Sbjct: 28  CSTVDMKAAACVGFATGKDSKPSSACCTGLQQLAQTVKSVDDKKAICRCLKASSKSLGIK 87

Query: 67  INQTLALALPGACNVQ 82
            +Q L+  +P ACN++
Sbjct: 88  -DQFLS-KIPAACNIK 101

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Ricinus communis (taxid: 3988)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
388517463	169	unknown [Lotus japonicus]	0.949	0.881	0.556	1e-37
449513419	169	PREDICTED: non-specific lipid-transfer p	0.891	0.828	0.604	1e-36
224112959	151	predicted protein [Populus trichocarpa]	0.808	0.841	0.58	1e-36
449432688	169	PREDICTED: non-specific lipid-transfer p	0.891	0.828	0.604	1e-36
224108005	166	predicted protein [Populus trichocarpa]	0.910	0.861	0.649	3e-36
357480991	168	Non-specific lipid-transfer protein [Med	0.955	0.892	0.559	8e-36
388509194	161	unknown [Medicago truncatula]	0.955	0.931	0.559	1e-35
359479639	163	PREDICTED: non-specific lipid-transfer p	0.929	0.895	0.564	1e-35
388510816	159	unknown [Lotus japonicus]	0.885	0.874	0.552	3e-35
225432722	181	PREDICTED: non-specific lipid-transfer p	0.993	0.861	0.584	5e-34

>gi|388517463|gb|AFK46793.1| unknown [Lotus japonicus]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/151 (55%), Positives = 112/151 (74%), Gaps = 2/151 (1%)

Query: 1   MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGG 60
           MLCA   AQS C NVL+ ++PCL+Y++G+SSTPS+ CCSQLA+VVRS P+CLC VLG G 
Sbjct: 17  MLCAGVAAQSSCANVLVSLSPCLNYITGNSSTPSSGCCSQLAAVVRSQPQCLCQVLGGGA 76

Query: 61  SSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAV 120
           SSLG++INQT ALALPGAC VQTPP S+CN AA  P  SP  P    P+   +GTGSK+ 
Sbjct: 77  SSLGININQTQALALPGACKVQTPPTSQCNTAAT-PANSPEEPAAESPNSGPSGTGSKST 135

Query: 121 PSTG-GSGASNALSVNAPSQLILSVVFMASY 150
           P+TG GS + N++ ++ P  L+L+  + +++
Sbjct: 136 PTTGDGSSSGNSIKLSIPLLLVLAATYASTF 166

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449513419|ref|XP_004164321.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Cucumis sativus]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/144 (60%), Positives = 110/144 (76%), Gaps = 4/144 (2%)

Query: 8   AQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSI 67
           AQSDCTNVLI MAPCL+Y++G+SSTPS  CC+QL++VVRSNP+CLC VL  GGSSLGV+I
Sbjct: 24  AQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGSSLGVNI 83

Query: 68  NQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSG 127
           NQT ALALP ACNVQTP VS CN   D P  SPAG P++  ++  +GTGSK VPST  +G
Sbjct: 84  NQTQALALPQACNVQTPSVSSCN--VDSPADSPAGAPDS-SNNVPSGTGSKTVPST-DNG 139

Query: 128 ASNALSVNAPSQLILSVVFMASYA 151
           +S+  S++    L+ S++  + YA
Sbjct: 140 SSDGSSIHMSKPLLFSILLASIYA 163

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112959|ref|XP_002332672.1| predicted protein [Populus trichocarpa] gi|222836466|gb|EEE74873.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/150 (58%), Positives = 106/150 (70%), Gaps = 23/150 (15%)

Query: 1   MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGG 60
           MLCAR MAQSDCT+VLI M+PCL+Y++G+SSTPS+QCC+QLASVVRS+P+CLC VL  GG
Sbjct: 17  MLCARAMAQSDCTSVLISMSPCLNYITGNSSTPSSQCCTQLASVVRSSPQCLCQVLNGGG 76

Query: 61  SSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAV 120
           SSLG+++NQT A+ALPGACNVQTPP+S CN                       GTGSK V
Sbjct: 77  SSLGINVNQTQAIALPGACNVQTPPISSCN-----------------------GTGSKTV 113

Query: 121 PSTGGSGASNALSVNAPSQLILSVVFMASY 150
           PST   G S A S+     L+L ++F ASY
Sbjct: 114 PSTQTDGTSGASSIEFSIPLLLLLLFAASY 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432688|ref|XP_004134131.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Cucumis sativus]

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/144 (60%), Positives = 110/144 (76%), Gaps = 4/144 (2%)

Query: 8   AQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSI 67
           AQSDCTNVLI MAPCL+Y++G+SSTPS  CC+QL++VVRSNP+CLC VL  GGSSLGV+I
Sbjct: 24  AQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGSSLGVNI 83

Query: 68  NQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSG 127
           NQT ALALP ACNVQTP VS CN   D P  SPAG P++  ++  +GTGSK VPST  +G
Sbjct: 84  NQTQALALPQACNVQTPSVSSCN--VDSPAGSPAGAPDS-SNNVPSGTGSKTVPST-DNG 139

Query: 128 ASNALSVNAPSQLILSVVFMASYA 151
           +S+  S++    L+ S++  + YA
Sbjct: 140 SSDGSSIHMSKPLLFSILLASIYA 163

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108005|ref|XP_002314684.1| predicted protein [Populus trichocarpa] gi|222863724|gb|EEF00855.1| predicted protein [Populus trichocarpa]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/151 (64%), Positives = 115/151 (76%), Gaps = 8/151 (5%)

Query: 1   MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGG 60
           +L A+ MAQS CTNVLI MAPCLSYV+GSSSTPS+ CCSQLASVV S P+CLC  L  GG
Sbjct: 18  VLSAKAMAQSGCTNVLISMAPCLSYVTGSSSTPSSSCCSQLASVVLSQPQCLCAALNGGG 77

Query: 61  SSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAV 120
           +SLG++IN+TLALALPGAC VQTPPVS+CN+  +GP +SPA  P+ LP       GSK V
Sbjct: 78  ASLGLNINETLALALPGACKVQTPPVSKCND-INGPVMSPADSPDGLPG------GSKTV 130

Query: 121 PSTGGSGASNALSVNAPSQLILSVVFMASYA 151
           P+TGGS   N L +N   QL+L VVFMAS A
Sbjct: 131 PATGGS-PGNGLIINKTLQLVLFVVFMASSA 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480991|ref|XP_003610781.1| Non-specific lipid-transfer protein [Medicago truncatula] gi|355512116|gb|AES93739.1| Non-specific lipid-transfer protein [Medicago truncatula]

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 109/152 (71%), Gaps = 2/152 (1%)

Query: 1   MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGG 60
           M+CA   AQS CTNVL+ ++PCL+Y++G+SSTPS+ CCS LASVV S P CLC VLG G 
Sbjct: 17  MMCAGATAQSSCTNVLVSLSPCLNYITGNSSTPSSGCCSNLASVVSSQPLCLCQVLGGGA 76

Query: 61  SSLGVSINQTLALALPGACNVQTPPVSRCNEA-ADGPDLSPAGPPEALPSDDSAGTGSKA 119
           SSLG+SINQT ALALPGAC VQTPP S+C    A  P  SPAG     P+   +GTGSK+
Sbjct: 77  SSLGISINQTQALALPGACKVQTPPTSQCKTTNAASPADSPAGTEAESPNSVPSGTGSKS 136

Query: 120 VPSTG-GSGASNALSVNAPSQLILSVVFMASY 150
            PSTG GS + N+++++ P  LIL+  + + +
Sbjct: 137 TPSTGDGSSSGNSINLSIPLFLILAAAYASVF 168

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509194|gb|AFK42663.1| unknown [Medicago truncatula]

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 109/152 (71%), Gaps = 2/152 (1%)

Query: 1   MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGG 60
           M+CA   AQS CTNVL+ ++PCL+Y++G+SSTPS+ CCS LASVV S P CLC VLG G 
Sbjct: 10  MMCAGATAQSSCTNVLVSLSPCLNYITGNSSTPSSGCCSNLASVVSSQPLCLCQVLGGGA 69

Query: 61  SSLGVSINQTLALALPGACNVQTPPVSRCNEA-ADGPDLSPAGPPEALPSDDSAGTGSKA 119
           SSLG+SINQT ALALPGAC VQTPP S+C    A  P  SPAG     P+   +GTGSK+
Sbjct: 70  SSLGISINQTQALALPGACKVQTPPTSQCKTTNAASPADSPAGTEAESPNSVPSGTGSKS 129

Query: 120 VPSTG-GSGASNALSVNAPSQLILSVVFMASY 150
            PSTG GS + N+++++ P  LIL+  + + +
Sbjct: 130 TPSTGDGSSSGNSINLSIPLFLILAAAYASVF 161

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479639|ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera] gi|296085218|emb|CBI28713.3| unnamed protein product [Vitis vinifera]

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/156 (56%), Positives = 110/156 (70%), Gaps = 10/156 (6%)

Query: 2   LCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGS 61
           L A  MAQS CTNV+I M+PCL+Y++G+SSTPS+ CC+QLASVVRS P+CLC VL  GGS
Sbjct: 18  LWAGAMAQSSCTNVIISMSPCLNYITGNSSTPSSGCCTQLASVVRSQPQCLCEVLNGGGS 77

Query: 62  SLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVP 121
           SLG+ INQT ALALP AC+VQTPP+SRCN  A  P  SPAG P        +G+ SK VP
Sbjct: 78  SLGIQINQTQALALPTACSVQTPPISRCN--ASSPADSPAGTPN-------SGSRSKTVP 128

Query: 122 STGGSGASNALSVNAPSQLILSVVFMASYALIASSL 157
           +T G  +S+  S+ +P  L   +VF AS A   +S+
Sbjct: 129 ATNGD-SSDGTSIKSPFSLTSFLVFFASCAATFTSI 163

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510816|gb|AFK43474.1| unknown [Lotus japonicus]

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/152 (55%), Positives = 109/152 (71%), Gaps = 13/152 (8%)

Query: 1   MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGG 60
           +LC    AQS CT+VL+ ++PCL+Y++G+SSTPS+ CCSQLASVVRS P+CLC VL  GG
Sbjct: 17  ILCVGAAAQSSCTSVLVNLSPCLNYITGNSSTPSSGCCSQLASVVRSQPQCLCQVLNGGG 76

Query: 61  SSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAV 120
           SSLG+SINQT ALALP ACNVQTPP S+CN AA          P   P+ D +GTGS+ V
Sbjct: 77  SSLGISINQTQALALPSACNVQTPPTSQCNAAAT---------PADSPNSDPSGTGSRTV 127

Query: 121 PS-TGGSGASNALSVNAPSQLILSVVFMASYA 151
           P+   GS + N++ ++ P   +L +VF A+YA
Sbjct: 128 PTPDDGSSSGNSIKLSIP---LLFIVFAATYA 156

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432722|ref|XP_002278952.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera]

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/166 (58%), Positives = 122/166 (73%), Gaps = 10/166 (6%)

Query: 1   MLCARTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGG 60
           ML A+ MAQS CT VLIGMAPCL+Y++GSSS+PS+ CCSQLASVV+S PRCLC+ L  GG
Sbjct: 17  MLWAKAMAQSGCTTVLIGMAPCLNYITGSSSSPSSSCCSQLASVVQSQPRCLCVALNGGG 76

Query: 61  SSLGVSINQTLALALPGACNVQTPPVSRCNEAADGPDL-----SPAGPPEALPSDDS--- 112
           ++LG++IN+TLALALPGACNVQTPPVS+C +AADGP       SP G PE  P   +   
Sbjct: 77  AALGITINRTLALALPGACNVQTPPVSQC-DAADGPATPPLLASPMGSPEGTPDFPTSSS 135

Query: 113 -AGTGSKAVPSTGGSGASNALSVNAPSQLILSVVFMASYALIASSL 157
            +G GSK VPS G   +  ++ +    QLI  ++FMASYA ++SSL
Sbjct: 136 VSGGGSKTVPSNGADSSDGSIIMKMCPQLIAILLFMASYASVSSSL 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.904	0.835	0.452	9.1e-29
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.789	0.677	0.446	9.7e-25
TAIR|locus:505006466	156	AT4G14815 [Arabidopsis thalian	0.808	0.814	0.419	1.8e-23
TAIR|locus:1006230669	171	AT1G03103 "AT1G03103" [Arabido	0.942	0.865	0.355	3.9e-21
TAIR|locus:2043750	169	XYP2 "xylogen protein 2" [Arab	0.917	0.852	0.341	1.1e-16
TAIR|locus:2184817	158	AT5G09370 [Arabidopsis thalian	0.815	0.810	0.321	3.8e-14
TAIR|locus:2164411	182	XYP1 "xylogen protein 1" [Arab	0.866	0.747	0.307	1e-13
TAIR|locus:2138586	208	AT4G08670 [Arabidopsis thalian	0.942	0.711	0.314	1.6e-13
TAIR|locus:2050482	205	AT2G44290 [Arabidopsis thalian	0.757	0.580	0.352	2.1e-13
TAIR|locus:2050492	204	AT2G44300 [Arabidopsis thalian	0.821	0.632	0.323	2.1e-13

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 67/148 (45%), Positives = 89/148 (60%)

Query:     8 AQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMXXXXXXXXXXXXI 67
             AQS CTN LI M+PCL+Y++G+S++P+ QCC+QL+ VV+S+P CLC             +
Sbjct:    24 AQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINV 83

Query:    68 NQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSG 127
             NQT AL LP ACNVQTPPVSRCN    G   +   P E+ P+    G GSK VP   G G
Sbjct:    84 NQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAES-PNSSGPGNGSKTVPVGEGDG 142

Query:   128 --ASNALSVNAPSQLIL---SVVFMASY 150
               +S+  S+     LI    +V +MA +
Sbjct:   143 PPSSDGSSIKFSFPLIAFFSAVSYMAIF 170

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 63/141 (44%), Positives = 83/141 (58%)

Query:     6 TMAQ--SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMXXXXXXXXX 63
             T AQ  S C + L  ++PCLSY++G+S+TPS  CCS+L SV++S+P+C+C          
Sbjct:    22 TKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNI 81

Query:    64 XXXINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGP------------PEALPSDD 111
                IN+T AL LP ACN+QTPP+++CN AA GP   P  P            P +LP   
Sbjct:    82 GLNINRTQALQLPNACNIQTPPLTQCN-AATGPTAQPPAPSPTEKTPDVTLTPTSLPGAR 140

Query:   112 SA-GTGSKAVPSTG-GSGASN 130
             S  G GSK VPS G GS + N
Sbjct:   141 SGVGGGSKTVPSVGTGSSSRN 161

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:505006466 AT4G14815 [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 60/143 (41%), Positives = 83/143 (58%)

Query:     8 AQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMXXXXXXXXXXXXI 67
             AQS CTNVLI MAPCLS+++ ++S PS QCC+QLA VVR +  CLC             +
Sbjct:    22 AQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGINV 81

Query:    68 NQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSG 127
             N+T ALALP AC+V+TPP SRC+  +            ++ S    G GSK VP    S 
Sbjct:    82 NETQALALPKACHVETPPASRCHSGS------------SVNSHSEHGNGSKTVPREKSS- 128

Query:   128 ASNALSVNAPSQLILSVVFMASY 150
             +  ++  + P   +L+++F ASY
Sbjct:   129 SDGSIKFSFP---LLAILFTASY 148

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:1006230669 AT1G03103 "AT1G03103" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 53/149 (35%), Positives = 78/149 (52%)

Query:     6 TMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLC-MXXXXXXXXXX 64
             T  Q+ C + L  ++PCL Y++G SS+PS  CC Q ++VV+S+P CLC +          
Sbjct:    19 TTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYG 78

Query:    65 XXINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTG 124
                N+TLAL LP ACNVQTP  S CN   + P   PA  P   P    + +G+ +  +T 
Sbjct:    79 FKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVGSPRSAPSPSGTTSPANTP 138

Query:   125 GSGASNALSVNAPSQLILSVVFMASYALI 153
                    LS  + S+  + ++   S AL+
Sbjct:   139 SGSKKFPLSNESSSKSNVIILSFVSIALV 167

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2043750 XYP2 "xylogen protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 53/155 (34%), Positives = 79/155 (50%)

Query:     5 RTMAQSDCTNVLIGMAPCLSYVSGSSST--PSAQCCSQLASVVRSNPRCLCMXXXXXXXX 62
             R  A  DC+++++ MA CLS+V+  S+   P   CCS L +VVR+ P CLC         
Sbjct:    20 RAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLC-EAFKNSGS 78

Query:    63 XXXXINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPS 122
                 ++ + A +LP  C V  PP +RC  +  G    PA  P   P+   AG G+ A+ S
Sbjct:    79 LGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDP--PATAPGLSPT---AGAGAPAL-S 132

Query:   123 TGGSGASNALSVNAPSQLILSV--VFMASYALIAS 155
             +G + A+   S  +    +LSV   F+   ALI+S
Sbjct:   133 SGANAATPVSSPRSSDASLLSVSFAFVIFMALISS 167

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2184817 AT5G09370 [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 45/140 (32%), Positives = 71/140 (50%)

Query:    10 SDCTNVLIGMAPCLSYVS--GSSSTPSAQCCSQLASVVRSNPRCLCMXXXXXXXXXXXXI 67
             SDC  ++I + PCL ++S  G++ TP+A CCS L +++ + P CLC             +
Sbjct:    26 SDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLC--EGLKKAPLGIKL 83

Query:    68 NQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPSTGGSG 127
             N T +  LP AC +  PPVS C+       L PA PP A       G+G    PS   S 
Sbjct:    84 NVTKSATLPVACKLNAPPVSACDS------LPPASPPTANGQAPVWGSGWAPAPSP--SK 135

Query:   128 ASNALSVNAPSQLILSVVFM 147
              ++ + ++  S +I++ + M
Sbjct:   136 GNSLIPISGFSFVIVTALAM 155

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2164411 XYP1 "xylogen protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 44/143 (30%), Positives = 71/143 (49%)

Query:    11 DCTNVLIGMAPCLSYVS--GSSSTPSAQCCSQLASVVRSNPRCLCMXXXXXXXXXXXXIN 68
             DC+ +++ MA CLS+VS  G+ + P   CCS L +V++++ +CLC             +N
Sbjct:    42 DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLC-EAFKSSASLGVTLN 100

Query:    69 QTLALALPGACNVQTPPVSRCNEAADGPDLSPA-GPPEALPSDDSAGTGSKAVPSTGGSG 127
              T A  LP AC +  P ++ C  +   P  +P   P  A    ++AG  +   PS+G  G
Sbjct:   101 ITKASTLPAACKLHAPSIATCGLSV-APSTAPGLAPGVAAAGPETAGFLAPN-PSSGNDG 158

Query:   128 ASNA-LSVNAPSQLILSVVFMAS 149
             +S    S       +L V+F +S
Sbjct:   159 SSLIPTSFTTVLSAVLFVLFFSS 181

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2138586 AT4G08670 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 50/159 (31%), Positives = 73/159 (45%)

Query:     8 AQSDCTNVLIGMAPCLSYVS-GSSST-PSAQCCSQLASVVRSNPRCLCMXXXXXXXXXXX 65
             + SDC+ V+  M  CL Y+  GS+ T P   CC+ + +V++ NP+C+C            
Sbjct:    44 SSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCIC-AGLVSAGEMGI 102

Query:    66 XINQTLALALPGACNVQTPPVSRCNEAADG---PDLSP----AGPPEALPSDDSAGTGSK 118
              +N T ALA P AC +   P   C     G   P  SP    AG P   PS   +   S 
Sbjct:   103 ELNSTRALATPKACKLSIAP-PHCGIITSGATTPGASPVSPSAGAPTTSPSAAKSPETSA 161

Query:   119 AVPSTGGSGASNALSVNAPSQLILSVVFMASYALIASSL 157
               PS+  + +  A S ++    ILSV  +    +I SS+
Sbjct:   162 TSPSSDETPSMTAPSPSSSGTNILSVPALTIVFVIVSSV 200

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2050482 AT2G44290 [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 48/136 (35%), Positives = 67/136 (49%)

Query:     9 QSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMXXXXXXX-XXXXXI 67
             + +CT  L+GMA CL YV G + +P+  CCS L  V+ S+ +CLCM             +
Sbjct:    33 KEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLGLQV 92

Query:    68 NQTLALALPGACNVQTPPVSRCNEAA----DGPDLS-----PAGPPEALPSDDSAGTGSK 118
             N +LALALP  C+  T  +++C        + PD         G  E + +  SA TGS 
Sbjct:    93 NVSLALALPSVCHA-TADITKCPALLHLDPNSPDAQVFYQLAKGLNETVSA--SAPTGSA 149

Query:   119 AVP----STGGSGASN 130
             + P    ST GS A N
Sbjct:   150 SEPTSMSSTPGSSAGN 165

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2050492 AT2G44300 [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 44/136 (32%), Positives = 68/136 (50%)

Query:     5 RTMAQSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMXXXXXXX-XX 63
             +T  + +CT  L+GMA CL YV G + +P+  CCS L  V+ SN +CLC+          
Sbjct:    28 KTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDL 87

Query:    64 XXXINQTLALALPGACNVQTPPVSRCNEAADGPDLSPAGPPEALPSDDSAGTGSKAVPST 123
                IN +LALALP  C+     V++C        L P  P   +    + G  +K  P++
Sbjct:    88 GLQINVSLALALPSVCHAAAD-VTKCPALLH---LDPNSPDAQVFYQLAKGL-NKTGPAS 142

Query:   124 GGSGAS-NALSVNAPS 138
               +G+S   +S++  S
Sbjct:   143 APTGSSPGPISISPTS 158

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	157
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	2e-18
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	3e-10
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	1e-07
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	3e-07
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	7e-07

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 73.6 bits (181), Expect = 2e-18
 Identities = 33/63 (52%), Positives = 44/63 (69%)

Query: 19 MAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGA 78
          +APCLSY++G ++ P + CCS L SVV+S+P+CLC  L   G+SL    N T ALALP A
Sbjct: 1  LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAA 60

Query: 79 CNV 81
          C +
Sbjct: 61 CGL 63

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 53.3 bits (128), Expect = 3e-10
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 12 CTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTL 71
          C  VL+ +APC  Y+ G    PS QCCSQL  +     +C C  +          IN   
Sbjct: 1  CGQVLLKLAPCAGYLQGGCQVPSQQCCSQLRQL---QAQCRCTAIRAIVLG-IEGINPQA 56

Query: 72 ALALPGACNVQTPPVSRC 89
          A +LP  C V  P    C
Sbjct: 57 AASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 46.2 bits (109), Expect = 1e-07
 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 12 CTNVLIGMAPCLSYVSG--SSSTPSAQCCSQLASVVRSNPRCLCMVLGD--GGSSLGVSI 67
          C  VL+ +APCLSY+ G    + PS QCCSQL  +   + +C C+ L     G      +
Sbjct: 1  CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGL 58

Query: 68 NQTLALALPGACNVQTPP 85
          N   A +LP AC V  P 
Sbjct: 59 NAQNAASLPSACGVPPPY 76

Length = 79

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 8  AQSDCTNVLIGMAPCLSYVSGS-SSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVS 66
          + + C + L+   PCL Y   + ++ PS  CC+ L + V+++  CLC ++    ++ G  
Sbjct: 18 SAASCADSLL---PCLGYCYVNGTAAPSPACCAALKAAVKADVPCLCDLVTSPLAA-GFG 73

Query: 67 INQTLALALPGACNVQTPP 85
          IN T A+ALP AC + +PP
Sbjct: 74 INLTRAVALPKACGLTSPP 92

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 44.6 bits (106), Expect = 7e-07
 Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 11/86 (12%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCS---QLASVVRSNPR----CLCMVLGDGGSSL 63
           C  V   +APCL Y++G    PS  CCS    L  + ++       C C+     G S 
Sbjct: 2  SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGIS- 60

Query: 64 GVSINQTLALALPGACNVQTP-PVSR 88
             +N   A  LPG C V  P P+S 
Sbjct: 61 --GLNPGRAAGLPGKCGVSIPYPISP 84

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.68
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.62
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.58
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.52
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.47
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.19
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.88
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	96.47
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	96.15
cd00261	110	AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and	85.31

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.68  E-value=2.3e-17  Score=116.32  Aligned_cols=80  Identities=33%  Similarity=0.726  Sum_probs=65.4

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhcC-----CCceeceeccCCCCCCCcccCHHHHhhccccCCCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRS-----NPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTP   84 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~-----~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~p   84 (157)
                      .+|..++..|.||++|++++...|++.||++++++++.     +.+|+|+.+++....+. +||.+||++||++|||+++
T Consensus         1 ~~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~-~i~~~~a~~LP~~C~v~~~   79 (89)
T cd01960           1 ISCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGIS-GLNPGRAAGLPGKCGVSIP   79 (89)
T ss_pred             CCHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccC-CCCHHHHHhChHhcccCCC
Confidence            36999999999999999998778999999999998753     45677777887654442 3999999999999999976


Q ss_pred             ----CCCCCC
Q 040530           85 ----PVSRCN   90 (157)
Q Consensus        85 ----p~s~C~   90 (157)
                          +.+||+
T Consensus        80 ~~i~~~~dC~   89 (89)
T cd01960          80 YPISPSTDCS   89 (89)
T ss_pred             CCCCCCCCCC
Confidence                456664

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.62  E-value=2.7e-16  Score=107.57  Aligned_cols=71  Identities=35%  Similarity=0.712  Sum_probs=59.6

Q ss_pred             chhhhcCcccChhhhhCCC--CCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCCCCCCC
Q 040530           12 CTNVLIGMAPCLSYVSGSS--STPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPPVSRC   89 (157)
Q Consensus        12 C~~~~~~L~pCl~yltg~~--~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~pp~s~C   89 (157)
                      |...+..|+||++||++++  ..|+..||++||++   +..|+|.+++..  .+. .||.+||++||++|||++|+ ++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~--~~~-~i~~~~a~~Lp~~Cgv~~p~-~~C   73 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSL--VLQ-IIDPDKAVYLPAKCGLPLPP-SSC   73 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCC--ccc-ccCHHHHHHHHHHcCCCCCC-CCC
Confidence            5666788999999999876  36899999999986   567999877653  233 49999999999999999988 887

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.58  E-value=1.1e-15  Score=100.87  Aligned_cols=63  Identities=52%  Similarity=0.995  Sum_probs=54.1

Q ss_pred             cccChhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCC
Q 040530           19 MAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNV   81 (157)
Q Consensus        19 L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv   81 (157)
                      |+||++|++++...|+..||++++++.+.++.|||+++++........+|.+++++||++|||
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence            679999999987789999999999999989999999999875433212379999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.52  E-value=1.1e-15  Score=107.61  Aligned_cols=75  Identities=53%  Similarity=1.071  Sum_probs=48.9

Q ss_pred             cCCchhhhcCcccC---hhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCCC
Q 040530            9 QSDCTNVLIGMAPC---LSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTPP   85 (157)
Q Consensus         9 ~~~C~~~~~~L~pC---l~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~pp   85 (157)
                      ..+|..   .|.+|   +.|++++ ..|++.||+++|++++.++.|||+++++.. ..+++||.+|++.||++||++.++
T Consensus        19 ~~~c~~---~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~-~~~~~in~~~a~~Lp~~Cg~~~~~   93 (96)
T PF14368_consen   19 CCSCAN---SLLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSPG-APGFGINVTRALALPAACGVPVPP   93 (96)
T ss_dssp             TTB-HC---CCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CC-HCHHCCTCHHHHHHHHHCTSS-S-
T ss_pred             cchhHH---HHhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCccc-cccCCcCHHHHHHHHHHcCCCCCC
Confidence            345654   46666   7888854 579999999999998889999999999865 234579999999999999999987


Q ss_pred             CCCC
Q 040530           86 VSRC   89 (157)
Q Consensus        86 ~s~C   89 (157)
                       ++|
T Consensus        94 -~~C   96 (96)
T PF14368_consen   94 -SKC   96 (96)
T ss_dssp             ----
T ss_pred             -CCC
Confidence             777

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.47  E-value=3.6e-14  Score=95.84  Aligned_cols=61  Identities=34%  Similarity=0.688  Sum_probs=52.9

Q ss_pred             cCcccChhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCC
Q 040530           17 IGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTP   84 (157)
Q Consensus        17 ~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~p   84 (157)
                      .+|.+|++|++++ ..|++.||+.||+    +..|||+|++++.  ++..||.++|++|+++|||++|
T Consensus         4 ~~L~~C~~ai~~~-~~Ps~~CC~~Lk~----~~~CLC~y~~~p~--l~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           4 TQLSPCLPAILGG-SPPSAACCAKLKE----QQSCLCQYAKNPS--LKQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhcccCHHHHhCC-CCCCHHHHHHHhc----CCCCeeeeecCcc--HHhhcCcHHHHHHHHHcCCCCC
Confidence            4799999999976 4799999999999    4589999998863  4446999999999999999985

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.19  E-value=2.6e-11  Score=81.00  Aligned_cols=75  Identities=40%  Similarity=0.837  Sum_probs=59.6

Q ss_pred             chhhhcCcccChhhhhCC--CCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCc--ccCHHHHhhccccCCCCCCCCC
Q 040530           12 CTNVLIGMAPCLSYVSGS--SSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGV--SINQTLALALPGACNVQTPPVS   87 (157)
Q Consensus        12 C~~~~~~L~pCl~yltg~--~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~--~in~t~a~~LP~~Cgv~~pp~s   87 (157)
                      |...+..+.+|++|+++.  ...|+..||++|+.+.  +..|+|.+++.....+..  .+|..++..||+.||+..+. +
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~~-~   77 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPPY-T   77 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCCC-C
Confidence            667777888999999987  4578899999999986  788999888875422211  26999999999999998754 4


Q ss_pred             CC
Q 040530           88 RC   89 (157)
Q Consensus        88 ~C   89 (157)
                      +|
T Consensus        78 ~C   79 (79)
T smart00499       78 DC   79 (79)
T ss_pred             CC
Confidence            54

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.88  E-value=2.9e-11  Score=84.48  Aligned_cols=69  Identities=35%  Similarity=0.804  Sum_probs=56.0

Q ss_pred             cCcccChhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCC---------CcccCHHHHhhccccCCCCCCCCC
Q 040530           17 IGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSL---------GVSINQTLALALPGACNVQTPPVS   87 (157)
Q Consensus        17 ~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~l---------g~~in~t~a~~LP~~Cgv~~pp~s   87 (157)
                      ..|.+|..|++++...|+..||++|+++   ++.|.|..|+......         ...++..+|..||+.|||.++. +
T Consensus        13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~-~   88 (90)
T PF00234_consen   13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY-T   88 (90)
T ss_dssp             SHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS-S
T ss_pred             ccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC-C
Confidence            4589999999997667999999999999   8999999887653221         1368999999999999999865 5


Q ss_pred             CC
Q 040530           88 RC   89 (157)
Q Consensus        88 ~C   89 (157)
                      +|
T Consensus        89 ~C   90 (90)
T PF00234_consen   89 DC   90 (90)
T ss_dssp             -G
T ss_pred             CC
Confidence            66

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=96.47  E-value=0.00091  Score=47.32  Aligned_cols=77  Identities=26%  Similarity=0.583  Sum_probs=53.3

Q ss_pred             chhhhcCcccChhhhh----CCCCCCcHhHHHHHHhhhcCC-CceeceeccCCCCCCC-cccCHHHHh-hccccCCCCCC
Q 040530           12 CTNVLIGMAPCLSYVS----GSSSTPSAQCCSQLASVVRSN-PRCLCMVLGDGGSSLG-VSINQTLAL-ALPGACNVQTP   84 (157)
Q Consensus        12 C~~~~~~L~pCl~ylt----g~~~~Ps~~CC~~lk~v~~~~-~~CLC~~l~~~~~~lg-~~in~t~a~-~LP~~Cgv~~p   84 (157)
                      |-....+|--|.+.+.    .-+..+...||.-++.+.+.+ ..|||..+|...  +| +++|....+ .|-..||...|
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~v--lg~i~~~ipv~l~~lln~CGk~~p   79 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANV--LGLINVNIPVALNLLLNACGKTVP   79 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhc--ccccccccccHHHHHHHHhCCcCc
Confidence            4444457778888771    112246788999999988765 699998888753  44 344443333 46788999999


Q ss_pred             CCCCCC
Q 040530           85 PVSRCN   90 (157)
Q Consensus        85 p~s~C~   90 (157)
                      +.++|.
T Consensus        80 ~gf~C~   85 (85)
T PF14547_consen   80 SGFTCP   85 (85)
T ss_pred             CCCcCC
Confidence            999984

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=96.15  E-value=0.0044  Score=43.87  Aligned_cols=76  Identities=26%  Similarity=0.612  Sum_probs=53.0

Q ss_pred             chhhhcCcccChhhhhCC----CCCCcHhHHHHHHhhhcCC-CceeceeccCCCCCCCcccCHHHHhh-ccccCCCCCCC
Q 040530           12 CTNVLIGMAPCLSYVSGS----SSTPSAQCCSQLASVVRSN-PRCLCMVLGDGGSSLGVSINQTLALA-LPGACNVQTPP   85 (157)
Q Consensus        12 C~~~~~~L~pCl~yltg~----~~~Ps~~CC~~lk~v~~~~-~~CLC~~l~~~~~~lg~~in~t~a~~-LP~~Cgv~~pp   85 (157)
                      |-.+..+|--|.+-+..-    +..|...||.-++.+.+-+ ..|||..||..  .+|+++|..-.+. |-..||-..|+
T Consensus         4 CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan--~lgi~~~~pv~l~llln~CGk~~P~   81 (85)
T cd01958           4 CPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN--ILGISINIPVALSLLLNSCGRNVPP   81 (85)
T ss_pred             CCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc--ccCcccccChhHHHHHHHHcCcCCC
Confidence            444445666777765321    2357789999999987754 69999988864  3555555555554 45689999998


Q ss_pred             CCCC
Q 040530           86 VSRC   89 (157)
Q Consensus        86 ~s~C   89 (157)
                      .++|
T Consensus        82 gf~C   85 (85)
T cd01958          82 GFTC   85 (85)
T ss_pred             CCcC
Confidence            8887

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins

Probab=85.31  E-value=0.15  Score=36.55  Aligned_cols=69  Identities=28%  Similarity=0.545  Sum_probs=45.1

Q ss_pred             cCcccChhhhhCCC---C-----------CCcHhHHHHHHhhhcCCCceeceeccCCCCCC------------C--cccC
Q 040530           17 IGMAPCLSYVSGSS---S-----------TPSAQCCSQLASVVRSNPRCLCMVLGDGGSSL------------G--VSIN   68 (157)
Q Consensus        17 ~~L~pCl~yltg~~---~-----------~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~l------------g--~~in   68 (157)
                      ..|.+|..||.-..   .           ..-..||..|+.+   ...|.|..|.......            +  ...-
T Consensus        13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i---~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (110)
T cd00261          13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI---PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERM   89 (110)
T ss_pred             ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC---cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHH
Confidence            35789999986321   0           1236799999998   7899999886431100            0  1233


Q ss_pred             HHHHhhccccCCCCCCCCCCCC
Q 040530           69 QTLALALPGACNVQTPPVSRCN   90 (157)
Q Consensus        69 ~t~a~~LP~~Cgv~~pp~s~C~   90 (157)
                      ...|..||..|||..  ...|.
T Consensus        90 ~~~a~~Lp~~C~~~~--~~~C~  109 (110)
T cd00261          90 RQAAQNLPSMCNLYP--PPYCP  109 (110)
T ss_pred             HHHHHhhchhcCCCC--CCCCC
Confidence            457889999999985  23464

They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	157
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	2e-13
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	4e-10
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	2e-09
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	7e-09
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	7e-09
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	3e-05

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 61.4 bits (149), Expect = 2e-13
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCS---QLASVVRSNP--RCLCMVLGDGGSSLGV 65
           C  V   +APC+SY  G  S PSA CCS    L +  R+    R  C  L +  + +  
Sbjct: 3  SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS- 61

Query: 66 SINQTLALALPGACNVQTP 84
           +N   A ++P  C V  P
Sbjct: 62 GLNAGNAASIPSKCGVSIP 80

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 52.5 bits (126), Expect = 4e-10
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCS--QLASVVRS--NPRCLCMVLGDGGSSLGVS 66
           C  V   +APC+ YV G  + P A C     + ++ R+  + +  C  L    +S+   
Sbjct: 3  TCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-G 61

Query: 67 INQTLALALPGACNVQTP 84
          +N   A ALPG C V  P
Sbjct: 62 VNPNNAAALPGKCGVSIP 79

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 50.6 bits (121), Expect = 2e-09
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCS--QLASVVRS--NPRCLCMVLGDGGSSLGVS 66
          DC +V   + PCLSYV G        C     L +  RS  + +  C  L      +  +
Sbjct: 2  DCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-N 60

Query: 67 INQTLALALPGACNVQTP 84
          +N+  A ++P  C V  P
Sbjct: 61 LNEDNARSIPPKCGVNLP 78

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 49.5 bits (118), Expect = 7e-09
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 5/78 (6%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCS--QLASVVRS--NPRCLCMVLGDGGSSLGVS 66
           C  V   +A C+ ++      P + C     + +  R+  + R +C  L     ++   
Sbjct: 2  TCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR-G 60

Query: 67 INQTLALALPGACNVQTP 84
          IN   A ALPG C V  P
Sbjct: 61 INPNNAEALPGKCGVNIP 78

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 49.5 bits (118), Expect = 7e-09
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCS-QLASVVRS--NPRCLCMVLGDGGSSLGVSI 67
           C  V   +APCL+Y+  +            L +  R+  + +  C  L     ++   I
Sbjct: 3  TCGQVTSNLAPCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-GI 61

Query: 68 NQTLALALPGACNVQTP 84
          N   A  LP  C V  P
Sbjct: 62 NLGKAAGLPSTCGVNIP 78

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana} Length = 77

 Score = 39.3 bits (91), Expect = 3e-05
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 8  AQSDCTNVLIGMAPCLSYVSGSSST-PSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVS 66
          A   C      +  C   VS  + T PS  CC+ L     ++  CLC             
Sbjct: 1  AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQ---HADFACLCGYKNSPWLGS-FG 56

Query: 67 INQTLALALPGACNVQTPP 85
          ++  LA ALP  C +   P
Sbjct: 57 VDPELASALPKQCGLANAP 75

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	157
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.76
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.76
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.74
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.74
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.73
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.73
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.61
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.54
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.51
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	96.42
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	95.35
1pnb_B	75	Napin BNIB; napin IA and IB, albumin SEED protein,	90.34
1hss_A	124	0.19 alpha-amylase inhibitor; cereal inhibitor, an	89.59
1s6d_A	103	Albumin 8; all helix, folded LEAF, right-handed su	89.57
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	88.06
2lvf_A	114	2S albumin; allergen, copper binding, hydrophobic	85.65
1bea_A	127	Bifunctional amylase/serine protease inhibitor; am	84.04
1psy_A	125	2S albumin, RICC3; albumin SEED protein, SEED stor	82.16
1b1u_A	122	Protein (alpha-amylase/trypsin inhibitor RATI); bi	81.55
1sm7_A	109	Recombinant IB pronapin; all alpha-helix, right-ha	80.83

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.76  E-value=3.1e-20  Score=132.05  Aligned_cols=83  Identities=31%  Similarity=0.732  Sum_probs=71.3

Q ss_pred             cCCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhcC-----CCceeceeccCCCCCCCcccCHHHHhhccccCCCCC
Q 040530            9 QSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRS-----NPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQT   83 (157)
Q Consensus         9 ~~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~-----~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~   83 (157)
                      +++|.+++..|+||++||+|+. .|++.||+++|+++..     +++|+|+.||+.+..+ .+||.+||++||++|||++
T Consensus         1 AisC~~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~-~~in~~~a~~LP~~CgV~~   78 (93)
T 2ljo_A            1 AISCGAVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSI-TKLNTNNAAALPGKCGVNI   78 (93)
T ss_dssp             CCSSHHHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGC-TTCCHHHHHHHHHHHTCCC
T ss_pred             CCCHHHHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhcc-CCcCHHHHHhhhHhcCCCC
Confidence            4689999999999999999875 6999999999998752     4689999999865444 4799999999999999999


Q ss_pred             C----CCCCCCCCC
Q 040530           84 P----PVSRCNEAA   93 (157)
Q Consensus        84 p----p~s~C~~~~   93 (157)
                      |    +.+||+++.
T Consensus        79 p~~Is~~~dC~~v~   92 (93)
T 2ljo_A           79 PYKISTTTNCNTVK   92 (93)
T ss_dssp             SSCCSTTCCGGGCC
T ss_pred             CCCCCCCCCCCCCC
Confidence            8    778999864

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.76  E-value=4.8e-20  Score=130.76  Aligned_cols=80  Identities=33%  Similarity=0.730  Sum_probs=67.9

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhc-------CCCceeceeccCCCCCCCcccCHHHHhhccccCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVR-------SNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQ   82 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~-------~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~   82 (157)
                      .+|.+++..|.||++|++++...|++.||++||++++       ++..|+|  ++.....++ +||.++|++||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~~~~~-~in~~~A~~LP~~C~v~   78 (93)
T 1afh_A            2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVS-GLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHHTTST-TCCHHHHHHHHHHHHCC
T ss_pred             CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEe--ecccccccc-CcCHHHHHHHHHHcCCC
Confidence            6799999999999999999887899999999999873       3468999  554444455 79999999999999998


Q ss_pred             CC----CCCCCCCC
Q 040530           83 TP----PVSRCNEA   92 (157)
Q Consensus        83 ~p----p~s~C~~~   92 (157)
                      +|    +.+||+++
T Consensus        79 ~p~~is~~~dC~~v   92 (93)
T 1afh_A           79 IPYTISTSTDCSRV   92 (93)
T ss_dssp             CSSCCSTTCCSSSC
T ss_pred             CCCCCCCCCCCccC
Confidence            87    67899876

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.74  E-value=8e-20  Score=128.96  Aligned_cols=79  Identities=32%  Similarity=0.661  Sum_probs=67.2

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhc-------CCCceeceeccCCCCCCCcccCHHHHhhccccCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVR-------SNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQ   82 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~-------~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~   82 (157)
                      .+|.+++..|.||++|+++++. |++.||++||++++       +|..|+|  +++.+..++ +||.++|++||++|||+
T Consensus         1 i~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~   76 (90)
T 1bwo_A            1 IDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGIH-NLNEDNARSIPPKCGVN   76 (90)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTCT-TCCHHHHHTHHHHHTCC
T ss_pred             CCHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhccC-CcCHHHHHHHHHHcCCC
Confidence            4699999999999999999876 99999999999873       3579999  676555555 79999999999999998


Q ss_pred             CC----CCCCCCCC
Q 040530           83 TP----PVSRCNEA   92 (157)
Q Consensus        83 ~p----p~s~C~~~   92 (157)
                      +|    +.+||+++
T Consensus        77 ~p~~is~~~dC~~v   90 (90)
T 1bwo_A           77 LPYTISLNIDCSRV   90 (90)
T ss_dssp             CSSCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCCCC
Confidence            87    66899764

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.74  E-value=1.3e-19  Score=128.04  Aligned_cols=79  Identities=27%  Similarity=0.642  Sum_probs=67.2

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhc-------CCCceeceeccCCCCCCCcccCHHHHhhccccCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVR-------SNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQ   82 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~-------~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~   82 (157)
                      .+|.+++..|.||++|+++++. |++.||++||++++       ++..|+|  +++....++ +||.++|++||++|||+
T Consensus         1 i~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~~~-~in~~~A~~LP~~Cgv~   76 (91)
T 1siy_A            1 MTCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVR-GINPNNAEALPGKCGVN   76 (91)
T ss_dssp             CCTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTCCS-SCCHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccccC-CcCHHHHHHHHHHcCCC
Confidence            4699999999999999999876 99999999999864       2468999  566555564 79999999999999998


Q ss_pred             CC----CCCCCCCC
Q 040530           83 TP----PVSRCNEA   92 (157)
Q Consensus        83 ~p----p~s~C~~~   92 (157)
                      +|    +.+||+++
T Consensus        77 ~p~~is~~~dC~~v   90 (91)
T 1siy_A           77 IPYKISTSTNCNSI   90 (91)
T ss_dssp             CSSCSCTTSCSSTT
T ss_pred             CCCCCCCCCCCccC
Confidence            87    67899876

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.73  E-value=8.7e-20  Score=129.17  Aligned_cols=79  Identities=30%  Similarity=0.694  Sum_probs=66.8

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhh-------cCCCceeceeccCCCCCCCcccCHHHHhhccccCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVV-------RSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQ   82 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~-------~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~   82 (157)
                      .+|+.++..|.||++|+++++ .|++.||++||+++       ++++.|||.  +.....++ +||.++|++||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~--~~~~~~~~-~in~~~A~~LP~~Cgv~   77 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCL--KQLSASVP-GVNPNNAAALPGKCGVS   77 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHH--HHHHHHST-TCCHHHHHHHHHHTTCC
T ss_pred             CChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccc--cCcccccC-ccChHHHHHHHHHcCCC
Confidence            579999999999999999876 58899999999987       456899995  33333455 79999999999999999


Q ss_pred             CC----CCCCCCCC
Q 040530           83 TP----PVSRCNEA   92 (157)
Q Consensus        83 ~p----p~s~C~~~   92 (157)
                      +|    +.+||+++
T Consensus        78 ~p~~is~~~dC~~v   91 (92)
T 2alg_A           78 IPYKISASTNCATV   91 (92)
T ss_dssp             CSSCSSTTSCGGGC
T ss_pred             CCCCCCCCCCCccC
Confidence            87    67899875

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.73  E-value=1.2e-19  Score=128.30  Aligned_cols=78  Identities=31%  Similarity=0.744  Sum_probs=67.2

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhcC-------CCceeceeccCCCCCCCcccCHHHHhhccccCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRS-------NPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQ   82 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~-------~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~   82 (157)
                      .+|..++..|.||++|++++.. |+ .||++||++++.       +..|+|  +++....++ +||.++|++||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~   76 (91)
T 1t12_A            2 ITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVN   76 (91)
T ss_dssp             CCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTTCC
T ss_pred             CChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcCCC
Confidence            6799999999999999999887 88 999999998763       579999  566544555 79999999999999998


Q ss_pred             CC----CCCCCCCC
Q 040530           83 TP----PVSRCNEA   92 (157)
Q Consensus        83 ~p----p~s~C~~~   92 (157)
                      +|    +.+||+++
T Consensus        77 ~p~~is~~~dC~~v   90 (91)
T 1t12_A           77 IPYKISPSTDCSKV   90 (91)
T ss_dssp             CSSCSSSSSCCTTC
T ss_pred             CCCCCCCCCCCccC
Confidence            87    67899876

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.61  E-value=2.4e-17  Score=112.87  Aligned_cols=73  Identities=29%  Similarity=0.526  Sum_probs=61.3

Q ss_pred             ccCCchhhhcCcccChhhhhCC-CCCCcHhHHHHHHhhhcCCCceeceeccCC-CCCCCcccCHHHHhhccccCCCCCCC
Q 040530            8 AQSDCTNVLIGMAPCLSYVSGS-SSTPSAQCCSQLASVVRSNPRCLCMVLGDG-GSSLGVSINQTLALALPGACNVQTPP   85 (157)
Q Consensus         8 a~~~C~~~~~~L~pCl~yltg~-~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~-~~~lg~~in~t~a~~LP~~Cgv~~pp   85 (157)
                      ++.+|+.++..|+||++|++++ ...|++.||++||+.   ++.|||.++++. ...+  +||.++|++||++|||++|+
T Consensus         1 ~~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~---~~~ClC~~~~~~~~~~~--gin~~~A~~LP~~Cgv~~p~   75 (77)
T 2rkn_A            1 AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA---DFACLCGYKNSPWLGSF--GVDPELASALPKQCGLANAP   75 (77)
T ss_dssp             CCCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC---CHHHHHTTTTCHHHHHH--TBCHHHHHHHHHHTTCSCCC
T ss_pred             CcchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc---CcCCcCcccCCcchhhc--CcCHHHHHHHHHHcCCCCCC
Confidence            3578999999999999999984 457999999999984   679999887763 2223  59999999999999999864

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.54  E-value=6.2e-16  Score=103.50  Aligned_cols=61  Identities=26%  Similarity=0.547  Sum_probs=53.4

Q ss_pred             cCcccChhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCC
Q 040530           17 IGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTP   84 (157)
Q Consensus        17 ~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~p   84 (157)
                      ..|.||++||+++. .|+.+||++||+    +..|+|+++++..  ++.+||.++|++||++|||++|
T Consensus         5 ~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~--~~~~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            5 SQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKDPT--YGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             STTHHHHHHHTTCC-CCCHHHHHHHHH----HSSHHHHGGGCST--THHHHTCHHHHHHHHHHTSCCS
T ss_pred             hhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCcc--cccccCHHHHHHHHHHcCCCCC
Confidence            47899999999875 699999999998    4799999999864  4446999999999999999985

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.51  E-value=8.4e-16  Score=103.40  Aligned_cols=65  Identities=26%  Similarity=0.612  Sum_probs=55.1

Q ss_pred             CchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCC
Q 040530           11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTP   84 (157)
Q Consensus        11 ~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~p   84 (157)
                      .|+.  ..|.||++||+++. .|+.+||++||+    +..|||+++++..  ++.+||.++|++||++|||++|
T Consensus         2 ~C~~--~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~--~~~~in~~~A~~Lp~~Cgv~~P   66 (69)
T 1l6h_A            2 GCNA--GQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDPR--YGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             CSTT--TTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTCSS--HHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CCCh--hhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCcc--cccccCHHHHHHHHHHcCCCCC
Confidence            3554  47899999999875 699999999998    3799999999863  3446999999999999999985

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=96.42  E-value=0.00067  Score=46.46  Aligned_cols=72  Identities=25%  Similarity=0.626  Sum_probs=53.4

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhcCC-CceeceeccCCCCCCCcccCHHHHhh-ccccCCCCCCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSN-PRCLCMVLGDGGSSLGVSINQTLALA-LPGACNVQTPPVS   87 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~-~~CLC~~l~~~~~~lg~~in~t~a~~-LP~~Cgv~~pp~s   87 (157)
                      ..|-    +|--|.+-+.+. ..|...||.-++.+.+-+ ..|||..+|-    +|+ +|....+. |-..||...|+.+
T Consensus         6 ~~CP----kLgvCanvL~g~-~~~~~~CC~Ll~GL~dleAAvCLCtaik~----Lgi-lnlpv~L~llln~Cgk~~P~gF   75 (80)
T 1hyp_A            6 PSCP----DLSICLNILGGS-LGTVDDCCALIGGLGDIEAIVCLCIQLRA----LGI-LNLNRNLQLILNSCGRSYPSNA   75 (80)
T ss_dssp             CCSC----CCGGGGGGGGTC-CTTHHHHHHHHHTSCHHHHHHHHHHHHHH----HTC-SCHHHHHHHHHHHTTCSSCCCC
T ss_pred             CCCC----chhHHHHHhCcC-CCCCCccchhhhCcchhhhhhhhhhhccc----cce-eecChhHHHHHHHhCCcCcCCC
Confidence            3466    577888877543 247788999999987644 6999988872    455 56666666 5678999999999


Q ss_pred             CCCC
Q 040530           88 RCNE   91 (157)
Q Consensus        88 ~C~~   91 (157)
                      +|..
T Consensus        76 ~C~~   79 (80)
T 1hyp_A           76 TCPR   79 (80)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9963

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=95.35  E-value=0.00039  Score=60.32  Aligned_cols=53  Identities=28%  Similarity=0.682  Sum_probs=36.6

Q ss_pred             HhHHHHHHhhhcCCCceeceeccCCCCC-----CC----cccCHHHHhhccccCCCCCCCCCCCCC
Q 040530           35 AQCCSQLASVVRSNPRCLCMVLGDGGSS-----LG----VSINQTLALALPGACNVQTPPVSRCNE   91 (157)
Q Consensus        35 ~~CC~~lk~v~~~~~~CLC~~l~~~~~~-----lg----~~in~t~a~~LP~~Cgv~~pp~s~C~~   91 (157)
                      ..||+.|+.+- ++++|.|..|+.....     .+    ..+ ..+|..||..||+..|  .+|+-
T Consensus       429 ~~cc~~l~~~~-~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~--~~c~~  490 (500)
T 3ob4_A          429 ERCCNELNEFE-NNQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAP--QRCDL  490 (500)
T ss_dssp             HHHHHHHGGGT-TCHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCC--SCCCC
T ss_pred             HHHHHHHHhCC-cccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCC--ccCCc
Confidence            68999999982 1189999988764211     01    122 4559999999999843  58873

>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3

Probab=90.34  E-value=0.033  Score=37.25  Aligned_cols=54  Identities=26%  Similarity=0.549  Sum_probs=37.4

Q ss_pred             CCcHhHHHHHHhhhcCCCceeceeccCCCC------CCCc---ccCHHHHhhccccCCCCCCCCCCCC
Q 040530           32 TPSAQCCSQLASVVRSNPRCLCMVLGDGGS------SLGV---SINQTLALALPGACNVQTPPVSRCN   90 (157)
Q Consensus        32 ~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~------~lg~---~in~t~a~~LP~~Cgv~~pp~s~C~   90 (157)
                      ..-..||+.|+.+   ++.|.|..|+....      .++-   .-...+|..||..||+..+  ..|.
T Consensus         9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~   71 (75)
T 1pnb_B            9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCP   71 (75)
T ss_dssp             SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCC
T ss_pred             HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCC
Confidence            3456899999998   89999988865420      1211   1125567889999999743  5675

>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2

Probab=89.59  E-value=0.046  Score=40.15  Aligned_cols=64  Identities=22%  Similarity=0.451  Sum_probs=41.8

Q ss_pred             CcccChhhhhCC---CCCC---cHhHHHHHHhhhcCCCceeceeccCCCC----CCCc--------c-------cCHHHH
Q 040530           18 GMAPCLSYVSGS---SSTP---SAQCCSQLASVVRSNPRCLCMVLGDGGS----SLGV--------S-------INQTLA   72 (157)
Q Consensus        18 ~L~pCl~yltg~---~~~P---s~~CC~~lk~v~~~~~~CLC~~l~~~~~----~lg~--------~-------in~t~a   72 (157)
                      .|..|..||...   ...|   -..||..|+++   ...|.|..|.....    .+|.        .       +-...|
T Consensus        16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A   92 (124)
T 1hss_A           16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   92 (124)
T ss_dssp             CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred             cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence            477899998621   1123   35799999998   79999988754321    0110        0       112257


Q ss_pred             hhccccCCCCCC
Q 040530           73 LALPGACNVQTP   84 (157)
Q Consensus        73 ~~LP~~Cgv~~p   84 (157)
                      ..||..|||.++
T Consensus        93 ~~LP~~Cnl~~~  104 (124)
T 1hss_A           93 ASITAVCRLPIV  104 (124)
T ss_dssp             TTHHHHTTCCEE
T ss_pred             HhchhhcCCCCC
Confidence            889999999886

>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3

Probab=89.57  E-value=0.086  Score=37.27  Aligned_cols=71  Identities=21%  Similarity=0.430  Sum_probs=48.9

Q ss_pred             cCCchhhh--cC-cccChhhhhCCC------------CCCcHhHHHHHHhhhcCCCceeceeccCCC-CCC-C--cccCH
Q 040530            9 QSDCTNVL--IG-MAPCLSYVSGSS------------STPSAQCCSQLASVVRSNPRCLCMVLGDGG-SSL-G--VSINQ   69 (157)
Q Consensus         9 ~~~C~~~~--~~-L~pCl~yltg~~------------~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~-~~l-g--~~in~   69 (157)
                      ...|...+  .. |.+|..||.-..            ...-..||..|+.+   ++.|.|..|+... ..+ |  ..-..
T Consensus         8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~   84 (103)
T 1s6d_A            8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM   84 (103)
T ss_dssp             SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred             CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence            34577665  24 899999997421            12357899999998   7999999886543 122 1  11224


Q ss_pred             HHHhhccccCCCC
Q 040530           70 TLALALPGACNVQ   82 (157)
Q Consensus        70 t~a~~LP~~Cgv~   82 (157)
                      .+|..||..|||.
T Consensus        85 q~A~~LP~~C~i~   97 (103)
T 1s6d_A           85 SMAHNLPIECNLM   97 (103)
T ss_dssp             HHHHHHHHHTTSS
T ss_pred             HHHHhcHHhcCCC
Confidence            5688899999996

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=88.06  E-value=0.026  Score=37.63  Aligned_cols=51  Identities=33%  Similarity=0.655  Sum_probs=36.3

Q ss_pred             HhHHHHHHhhhcCCCceeceeccCCCC------C-CC---cccCHHHHhhccccCCCCCCCCCCCC
Q 040530           35 AQCCSQLASVVRSNPRCLCMVLGDGGS------S-LG---VSINQTLALALPGACNVQTPPVSRCN   90 (157)
Q Consensus        35 ~~CC~~lk~v~~~~~~CLC~~l~~~~~------~-lg---~~in~t~a~~LP~~Cgv~~pp~s~C~   90 (157)
                      ..||+.|+.+   ++.|.|..|+....      . ++   ..-...+|..||..||+..+  ..|.
T Consensus         8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~--~~C~   68 (72)
T 2ds2_B            8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACP   68 (72)
T ss_dssp             HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC--CCCC
T ss_pred             HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC--CcCC
Confidence            5799999998   89999998876431      1 11   11235678899999999642  4675

>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}

Probab=85.65  E-value=0.024  Score=40.90  Aligned_cols=78  Identities=27%  Similarity=0.563  Sum_probs=49.4

Q ss_pred             CCchhhh---cCcccChhhhh----CCC-C-CCc-------HhHHHHHHhhhcCCCceeceeccCCCCC-------C-Cc
Q 040530           10 SDCTNVL---IGMAPCLSYVS----GSS-S-TPS-------AQCCSQLASVVRSNPRCLCMVLGDGGSS-------L-GV   65 (157)
Q Consensus        10 ~~C~~~~---~~L~pCl~ylt----g~~-~-~Ps-------~~CC~~lk~v~~~~~~CLC~~l~~~~~~-------l-g~   65 (157)
                      ..|...+   ..|..|..||.    +.. . ...       ..||+.|+.+   ++.|.|..|+..+..       + +.
T Consensus         6 q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~   82 (114)
T 2lvf_A            6 EECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGE   82 (114)
T ss_dssp             HHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSH
T ss_pred             HhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhh
Confidence            3455443   24789999996    211 1 111       3599999998   899999888654211       1 10


Q ss_pred             --ccCHHHHhhccccCCCCCCCCCCCCCCC
Q 040530           66 --SINQTLALALPGACNVQTPPVSRCNEAA   93 (157)
Q Consensus        66 --~in~t~a~~LP~~Cgv~~pp~s~C~~~~   93 (157)
                        .==...|..||..|||.  | ..|.-.+
T Consensus        83 ~~~~~~q~A~~LP~~C~i~--p-~~C~f~~  109 (114)
T 2lvf_A           83 QMRRMMRLAENIPSRCNLS--P-MRCPMGG  109 (114)
T ss_dssp             HHHHHHHHHHHHHHHHCCC--C-SCCTTTT
T ss_pred             HHHHHHHHHHhChHhcCCC--c-ccCCCCC
Confidence              00134688999999997  3 5788644

>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A

Probab=84.04  E-value=0.31  Score=35.79  Aligned_cols=72  Identities=26%  Similarity=0.536  Sum_probs=46.5

Q ss_pred             CcccChhhhhCC----C-CCC----cHhHHHHHHhhhcCCCceeceeccCCCC----C-----C-Cc-c-c-------CH
Q 040530           18 GMAPCLSYVSGS----S-STP----SAQCCSQLASVVRSNPRCLCMVLGDGGS----S-----L-GV-S-I-------NQ   69 (157)
Q Consensus        18 ~L~pCl~yltg~----~-~~P----s~~CC~~lk~v~~~~~~CLC~~l~~~~~----~-----l-g~-~-i-------n~   69 (157)
                      .|..|..||...    . ..|    -..||..|+++   .+.|.|..|.....    .     . |. + +       -.
T Consensus        16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~   92 (127)
T 1bea_A           16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR   92 (127)
T ss_dssp             CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred             cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence            477899999522    1 123    34599999998   79999987743210    0     0 11 1 1       13


Q ss_pred             HHHhhc--cccCCCCCCCC-CCCCCC
Q 040530           70 TLALAL--PGACNVQTPPV-SRCNEA   92 (157)
Q Consensus        70 t~a~~L--P~~Cgv~~pp~-s~C~~~   92 (157)
                      ..|..|  |..|||.+++. ..|...
T Consensus        93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~~  118 (127)
T 1bea_A           93 GFAATLVTEAECNLATISGVAECPWI  118 (127)
T ss_dssp             HHHTTTTSTTTTCCCCTTSSSCCTTT
T ss_pred             HHHHhcCCcccCCCCCCCCCCCCCcc
Confidence            357889  99999988633 478765

>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3

Probab=82.16  E-value=0.081  Score=38.71  Aligned_cols=69  Identities=26%  Similarity=0.522  Sum_probs=47.4

Q ss_pred             CCchhhh--cCcccChhhhhCCC----------CCC-----------cHhHHHHHHhhhcCCCceeceeccCCCC-----
Q 040530           10 SDCTNVL--IGMAPCLSYVSGSS----------STP-----------SAQCCSQLASVVRSNPRCLCMVLGDGGS-----   61 (157)
Q Consensus        10 ~~C~~~~--~~L~pCl~yltg~~----------~~P-----------s~~CC~~lk~v~~~~~~CLC~~l~~~~~-----   61 (157)
                      ..|...+  ..|.+|..||.-..          ..|           -..||..|+.+   ++.|.|..|+..+.     
T Consensus        16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~qQ   92 (125)
T 1psy_A           16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQ   92 (125)
T ss_dssp             SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHHH
Confidence            3587766  47999999997421          012           25799999998   89999998855431     


Q ss_pred             -CC-Cc--ccCHHHHhhccccCCC
Q 040530           62 -SL-GV--SINQTLALALPGACNV   81 (157)
Q Consensus        62 -~l-g~--~in~t~a~~LP~~Cgv   81 (157)
                       .+ +-  .=-..+|..||..|||
T Consensus        93 gq~~gqq~~~~~q~A~~LP~~C~i  116 (125)
T 1psy_A           93 GQLHGEESERVAQRAGEIVSSCGV  116 (125)
T ss_dssp             TTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred             hhhhHHHHHHHHHHHHhhHHHcCC
Confidence             11 11  1124567889999999

>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B

Probab=81.55  E-value=0.21  Score=36.42  Aligned_cols=71  Identities=25%  Similarity=0.447  Sum_probs=45.3

Q ss_pred             CcccChhhhhCC----C-CCC----cHhHHHHHHhhhcCCCceeceeccCCCC----CC----C--cc-c-------CHH
Q 040530           18 GMAPCLSYVSGS----S-STP----SAQCCSQLASVVRSNPRCLCMVLGDGGS----SL----G--VS-I-------NQT   70 (157)
Q Consensus        18 ~L~pCl~yltg~----~-~~P----s~~CC~~lk~v~~~~~~CLC~~l~~~~~----~l----g--~~-i-------n~t   70 (157)
                      .|..|..||...    . ..|    -..||..|+++   .+.|.|..|.....    ..    |  +. +       -..
T Consensus        16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~   92 (122)
T 1b1u_A           16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRA   92 (122)
T ss_dssp             TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHH
T ss_pred             cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHH
Confidence            577899999532    1 123    34699999998   79999987744211    00    0  01 1       113


Q ss_pred             HHhhc--cccCCCCCCCC-CCCCC
Q 040530           71 LALAL--PGACNVQTPPV-SRCNE   91 (157)
Q Consensus        71 ~a~~L--P~~Cgv~~pp~-s~C~~   91 (157)
                      .|..|  |..||+.+++. ..|..
T Consensus        93 ~A~~Lv~P~~Cnl~~~~g~~~C~~  116 (122)
T 1b1u_A           93 FAPKLVTEVECNLATIHGGPFCLS  116 (122)
T ss_dssp             HGGGTTSTTTTCCCCTTSSSCCSS
T ss_pred             HHHhcCCcccCCCCCCCCCccccc
Confidence            57789  99999988743 35654

>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}

Probab=80.83  E-value=0.12  Score=36.67  Aligned_cols=67  Identities=24%  Similarity=0.584  Sum_probs=44.2

Q ss_pred             cccChhhhhC----CC--CCC---------cHhHHHHHHhhhcCCCceeceeccCCCC------CCC---cccCHHHHhh
Q 040530           19 MAPCLSYVSG----SS--STP---------SAQCCSQLASVVRSNPRCLCMVLGDGGS------SLG---VSINQTLALA   74 (157)
Q Consensus        19 L~pCl~yltg----~~--~~P---------s~~CC~~lk~v~~~~~~CLC~~l~~~~~------~lg---~~in~t~a~~   74 (157)
                      |.+|..||.-    ..  ..|         -..||..|+.+   +..|.|..|+....      .++   ..-...+|..
T Consensus        15 L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~   91 (109)
T 1sm7_A           15 LRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKN   91 (109)
T ss_dssp             CSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence            8899999972    11  112         35899999998   89999988865321      111   0112344778


Q ss_pred             ccccCCCCCCCCCCCC
Q 040530           75 LPGACNVQTPPVSRCN   90 (157)
Q Consensus        75 LP~~Cgv~~pp~s~C~   90 (157)
                      ||..|||..+  ..|.
T Consensus        92 LP~~Cnl~~~--~~C~  105 (109)
T 1sm7_A           92 LPNVCNMKQI--GTCP  105 (109)
T ss_dssp             HHHHSCCCSS--CSSC
T ss_pred             CHHhcCCCCC--CCCC
Confidence            9999999743  4675

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	157
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	1e-14
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	3e-14

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 63.3 bits (154), Expect = 1e-14
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVR-----SNPRCLCMVLGDGGSSLGV 65
           C  V   +APC+SY  G  S PSA CCS + S+       ++ R  C  L +  + +  
Sbjct: 3  SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS- 61

Query: 66 SINQTLALALPGACNVQTP 84
           +N   A ++P  C V  P
Sbjct: 62 GLNAGNAASIPSKCGVSIP 80

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 62.2 bits (151), Expect = 3e-14
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 5/78 (6%)

Query: 11 DCTNVLIGMAPCLSYVSGSSSTPSAQC--CSQLASVVRS--NPRCLCMVLGDGGSSLGVS 66
          +C  V   M PCL+YV G        C     L +  +S  + + +C  L         +
Sbjct: 2  NCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARG-IHN 60

Query: 67 INQTLALALPGACNVQTP 84
          +N   A ++P  CNV  P
Sbjct: 61 LNLNNAASIPSKCNVNVP 78

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	157
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.76
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.74
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.25
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	99.21
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	95.04
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	94.57
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	93.4
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	92.92

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.76  E-value=1.3e-20  Score=132.05  Aligned_cols=84  Identities=31%  Similarity=0.671  Sum_probs=71.9

Q ss_pred             cCCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhc-----CCCceeceeccCCCCCCCcccCHHHHhhccccCCCCC
Q 040530            9 QSDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVR-----SNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQT   83 (157)
Q Consensus         9 ~~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~-----~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~   83 (157)
                      +++|.+++..|.||++||+|++..|++.||++++++++     .+++|+|+.|++....+ .+||.+|+++||++|||++
T Consensus         1 Ai~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~-~~in~~ra~~LP~~C~v~l   79 (93)
T d1fk5a_           1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV-SGLNAGNAASIPSKCGVSI   79 (93)
T ss_dssp             CCCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTC-TTCCHHHHHHHHHHTTCCC
T ss_pred             CCCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhccccc-CCcCHHHHHhhhHhcCCCC
Confidence            46899999999999999999888899999999998875     25679998898764332 4799999999999999988


Q ss_pred             C----CCCCCCCCC
Q 040530           84 P----PVSRCNEAA   93 (157)
Q Consensus        84 p----p~s~C~~~~   93 (157)
                      |    +.+||++++
T Consensus        80 ~~pis~~~dCs~i~   93 (93)
T d1fk5a_          80 PYTISTSTDCSRVN   93 (93)
T ss_dssp             SSCCSTTCCGGGCC
T ss_pred             CCCCCCCCCCCcCC
Confidence            7    778999864

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.74  E-value=5e-20  Score=128.66  Aligned_cols=82  Identities=29%  Similarity=0.650  Sum_probs=69.9

Q ss_pred             CCchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhc-----CCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCC
Q 040530           10 SDCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVR-----SNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTP   84 (157)
Q Consensus        10 ~~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~-----~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~p   84 (157)
                      ++|.+++..|+||++||+|+. .|++.||++++++++     .+++|+|+.+++.+..+ .+||.+||++||++|||++|
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~~-~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~-~~in~~ra~~LP~~C~v~~p   78 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGGP-GPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGI-HNLNLNNAASIPSKCNVNVP   78 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTC-TTCCHHHHHHHHHHTTCCCC
T ss_pred             CCHHHHHHHHHhhHHHHcCCC-CCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccC-CCcCHHHHHhchHhcCCCCC
Confidence            479999999999999999875 699999999999875     25689999999865333 36999999999999999888


Q ss_pred             ----CCCCCCCCC
Q 040530           85 ----PVSRCNEAA   93 (157)
Q Consensus        85 ----p~s~C~~~~   93 (157)
                          +.+||++++
T Consensus        79 ~pis~~~dC~~i~   91 (91)
T d1mida_          79 YTISPDIDCSRIY   91 (91)
T ss_dssp             SCCCTTCCGGGCC
T ss_pred             CCCCCCCCCCCCC
Confidence                678999875

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.25  E-value=4.4e-13  Score=88.03  Aligned_cols=64  Identities=27%  Similarity=0.593  Sum_probs=56.4

Q ss_pred             chhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCC
Q 040530           12 CTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTP   84 (157)
Q Consensus        12 C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~p   84 (157)
                      |+.  .+|.||++.|+++. .|+..||+.||+    |..|||+|++++  .+...||..+|.++-++|||++|
T Consensus         2 C~p--~~L~~C~~Ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~kdP--~~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           2 CQA--SQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKDP--TYGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             CCG--GGGGGGHHHHHHCC-CCCHHHHHHHHH----HGGGHHHHTTCT--TTHHHHTSHHHHHHHHHTTCCCC
T ss_pred             CCh--hhccccHHHHhcCC-CCcHHHHHHHHh----cCCccceecCCc--cHHHHcCCHHHHHHHHhcCCCCC
Confidence            555  36999999999876 699999999999    678999999997  46567999999999999999986

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=99.21  E-value=4.3e-13  Score=88.52  Aligned_cols=65  Identities=26%  Similarity=0.612  Sum_probs=56.8

Q ss_pred             CchhhhcCcccChhhhhCCCCCCcHhHHHHHHhhhcCCCceeceeccCCCCCCCcccCHHHHhhccccCCCCCC
Q 040530           11 DCTNVLIGMAPCLSYVSGSSSTPSAQCCSQLASVVRSNPRCLCMVLGDGGSSLGVSINQTLALALPGACNVQTP   84 (157)
Q Consensus        11 ~C~~~~~~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~lg~~in~t~a~~LP~~Cgv~~p   84 (157)
                      .|+.  ..|.||++.|+++. .|+..||+.||+    |..|||+|++++.  +...||..+|.++-.+|||++|
T Consensus         2 ~C~p--~~L~~C~~ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~k~P~--~~~yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           2 GCNA--GQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDPR--YGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             CSTT--TTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTCSS--HHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CCCh--hhccccHHHHhCCC-CCcHHHHHHHHh----cCCccceeccCcc--HHHHcCCHHHHHHHHhcCCCCC
Confidence            3665  37999999999986 599999999999    6789999999973  5557999999999999999986

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=94.57  E-value=0.0024  Score=41.52  Aligned_cols=68  Identities=24%  Similarity=0.559  Sum_probs=47.5

Q ss_pred             CcccChhhhhCCCCCCcHhHHHHHHhhhcCC-CceeceeccCCCCCCCcccCHHHHhh-ccccCCCCCCCCCCCCC
Q 040530           18 GMAPCLSYVSGSSSTPSAQCCSQLASVVRSN-PRCLCMVLGDGGSSLGVSINQTLALA-LPGACNVQTPPVSRCNE   91 (157)
Q Consensus        18 ~L~pCl~yltg~~~~Ps~~CC~~lk~v~~~~-~~CLC~~l~~~~~~lg~~in~t~a~~-LP~~Cgv~~pp~s~C~~   91 (157)
                      +|--|.+-+.+.. .+...||.-++.+++-+ ..|||..||...  +   +|....+. |-..||-..|+.++|.+
T Consensus         5 Klg~C~nvLg~~~-~~~~~CC~Ll~GL~dleAAvCLCtaika~~--l---lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGSL-GTVDDCCALIGGLGDIEAIVCLCIQLRALG--I---LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTCC-TTHHHHHHHHHTSCHHHHHHHHHHHHHHHT--C---SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             chhhHHHHhcCcc-CCCCCcchHHhhHHHHHHHHHHHHHHHHhh--h---ccccchHHHHHHHcCCcCcCCCcCCC
Confidence            3556777665543 46778999999887644 689999888521  2   34443443 56689999999999975

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=93.40  E-value=0.0095  Score=40.83  Aligned_cols=71  Identities=21%  Similarity=0.418  Sum_probs=48.3

Q ss_pred             cCCchhhh---cCcccChhhhhCC-----CC-------CCcHhHHHHHHhhhcCCCceeceeccCCCCC-CC---cccCH
Q 040530            9 QSDCTNVL---IGMAPCLSYVSGS-----SS-------TPSAQCCSQLASVVRSNPRCLCMVLGDGGSS-LG---VSINQ   69 (157)
Q Consensus         9 ~~~C~~~~---~~L~pCl~yltg~-----~~-------~Ps~~CC~~lk~v~~~~~~CLC~~l~~~~~~-lg---~~in~   69 (157)
                      +..|...+   ..|..|..||...     ..       .-=..||+.|+.+   ++.|.|..|+..... ..   +.-=.
T Consensus         8 ~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~~~   84 (103)
T d1s6da_           8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM   84 (103)
T ss_dssp             SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred             cccCHHHHHHhHhHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcC---CCCCcCHHHHHHHHHHHhHHHHHHHH
Confidence            34577544   3789999999631     11       1225799999998   999999888664321 11   11224


Q ss_pred             HHHhhccccCCCC
Q 040530           70 TLALALPGACNVQ   82 (157)
Q Consensus        70 t~a~~LP~~Cgv~   82 (157)
                      ..|..||..||+.
T Consensus        85 q~Ak~LPs~C~i~   97 (103)
T d1s6da_          85 SMAHNLPIECNLM   97 (103)
T ss_dssp             HHHHHHHHHTTSS
T ss_pred             HHHHhChHhcCCC
Confidence            5688999999997

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=92.92  E-value=0.0033  Score=44.56  Aligned_cols=72  Identities=26%  Similarity=0.535  Sum_probs=48.1

Q ss_pred             cCCchhhh--cCcccChhhhhCCCC-----C-----Cc-----------HhHHHHHHhhhcCCCceeceeccCCCCC---
Q 040530            9 QSDCTNVL--IGMAPCLSYVSGSSS-----T-----PS-----------AQCCSQLASVVRSNPRCLCMVLGDGGSS---   62 (157)
Q Consensus         9 ~~~C~~~~--~~L~pCl~yltg~~~-----~-----Ps-----------~~CC~~lk~v~~~~~~CLC~~l~~~~~~---   62 (157)
                      ...|...+  ..|..|..||.-...     .     +.           ..||+.|+.+   ++.|.|..|+..+..   
T Consensus        15 ~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~~q   91 (125)
T d1psya_          15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQ   91 (125)
T ss_dssp             SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHH
T ss_pred             cccCHHHHHhhhHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhC---CcCCcCHHHHHHHHHHHH
Confidence            34576653  379999999974310     0     10           3699999998   899999888654211   


Q ss_pred             ---C-Cccc--CHHHHhhccccCCCCC
Q 040530           63 ---L-GVSI--NQTLALALPGACNVQT   83 (157)
Q Consensus        63 ---l-g~~i--n~t~a~~LP~~Cgv~~   83 (157)
                         + +..+  =..+|..||..||+..
T Consensus        92 q~~~~~~~~~~~~q~Ak~LPs~C~i~~  118 (125)
T d1psya_          92 QGQLHGEESERVAQRAGEIVSSCGVRC  118 (125)
T ss_dssp             HTTCCTTCSHHHHHHHHHHHHHHTCST
T ss_pred             HHHHHHHHHHHHHHHHHhChhhcCCcc
Confidence               1 1111  1557899999999975