Citrus Sinensis ID: 040572

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
PSRATTKQTNRRHQPHPRATTQSTRRLTPPPTQTERTRLDRRPAATTSSRPTTSSRQLQQPRESRLVDDMDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSPSPPMSTAPSSIP
Secondary Structure (PSIPRED)
ccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
psrattkqtnrrhqphprattqstrrltppptqtertrldrrpaattssrpttssrqlqqpresrlvddmdpEAARTARESLDLAFHMSNildtgldrhTLSVLIALCDLGVNPEALAAVVKELqrepspsppmstapssip
Flexible Loop (DISEMBL)
psrattkqtnrrhqphprattqstrrltppptqtertrldrrpaattssrpttssrqlqqpresrlvddmdpEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKElqrepspsppmstapssip
Low Complexity Region (SEG)
PSRATTKQTNRRHQPHPRATTQSTRRLTPPPTQTERTRLDrrpaattssrpttssrQLQQPRESRLVDDMDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREpspsppmstapssip
Disordered region (IsUnstruct)
*********************************************************************************LDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVV*********************
Disordered Region (DISOPRED)
*********************************************************************************LDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKE*******************
Disordered Region (DISEMBL)
***************************************************************************RTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKEL******************
Disordered Region (DISPRO)
****************************************************************************TARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQRE***************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
PSRATTKQTNRRHQPHPRATTQSTRRLTPPPTQTERTRLDRRPAATTSSRPTTSSRQLQQPRESRLVDDMDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSPSPPMSTAPSSIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
Q9M0N8	71	Mitotic-spindle organizin	yes	no	0.485	0.971	0.785	5e-24
Q9C9T3	67	Mitotic-spindle organizin	no	no	0.436	0.925	0.725	6e-21
A9NKD9	69	Mitotic-spindle organizin	N/A	no	0.429	0.884	0.754	4e-20
B5FXZ4	72	Mitotic-spindle organizin	yes	no	0.345	0.680	0.530	1e-10
Q0VFD6	72	Mitotic-spindle organizin	yes	no	0.345	0.680	0.510	7e-10
Q8BUR9	78	Mitotic-spindle organizin	yes	no	0.394	0.717	0.475	1e-09
Q5U4M5	72	Mitotic-spindle organizin	N/A	no	0.345	0.680	0.510	1e-09
Q08AG7	82	Mitotic-spindle organizin	yes	no	0.345	0.597	0.510	1e-09
P0C8Y1	75	Mitotic-spindle organizin	yes	no	0.345	0.653	0.489	2e-09
P0CP04	72	Mitotic-spindle organizin	yes	no	0.471	0.930	0.417	5e-09

>sp|Q9M0N8|MZT1B_ARATH Mitotic-spindle organizing protein 1B OS=Arabidopsis thaliana GN=At4g09550 PE=1 SV=1

 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 60/70 (85%), Gaps = 1/70 (1%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           MD EA+RTARESL+L F MSNILDTGLDRHTLSVLIALCDLGVNPEALA VVKEL+RE  
Sbjct: 1   MDEEASRTARESLELVFRMSNILDTGLDRHTLSVLIALCDLGVNPEALATVVKELRRESI 60

Query: 130 PSPPMSTAPS 139
           P   ++T PS
Sbjct: 61  PD-SVTTTPS 69

Required for gamma-tubulin complex recruitment to the centrosome.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C9T3|MZT1A_ARATH Mitotic-spindle organizing protein 1A OS=Arabidopsis thaliana GN=At1g73790 PE=3 SV=1

 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 55/62 (88%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           M+ EAA TARESL+L F MSNIL+TGLDRHTLSVLIALCD+G+NPEALA +VKEL+R+ +
Sbjct: 1   MNQEAAETARESLELVFRMSNILETGLDRHTLSVLIALCDIGLNPEALATLVKELRRDSA 60

Query: 130 PS 131
            +
Sbjct: 61  TT 62

Required for gamma-tubulin complex recruitment to the centrosome.

Arabidopsis thaliana (taxid: 3702)

>sp|A9NKD9|MZT1_PICSI Mitotic-spindle organizing protein 1 OS=Picea sitchensis PE=3 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 52/61 (85%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           MD  AA+ ARESLDLAF +SN L TGLDRHTLS+LIALC+ GVNPEALAAVVKEL+RE +
Sbjct: 1   MDRTAAQNARESLDLAFSISNFLQTGLDRHTLSILIALCEHGVNPEALAAVVKELRREAA 60

Query: 130 P 130
            
Sbjct: 61  A 61

Required for gamma-tubulin complex recruitment to the centrosome.

Picea sitchensis (taxid: 3332)

>sp|B5FXZ4|MZT1_TAEGU Mitotic-spindle organizing protein 1 OS=Taeniopygia guttata GN=mzt1 PE=3 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 40/49 (81%)

Query: 78  ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
            RE++D+ F +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct: 11  VRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 59

Required for gamma-tubulin complex recruitment to the centrosome.

Taeniopygia guttata (taxid: 59729)

>sp|Q0VFD6|MZT1_XENTR Mitotic-spindle organizing protein 1 OS=Xenopus tropicalis GN=mzt1 PE=3 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 39/49 (79%)

Query: 78  ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
            RE++D+   +S +L+TGLD  TLS+ + LC+ G+NPEAL++V+KEL+R
Sbjct: 11  VRETMDVLLEISRLLNTGLDMETLSICVRLCEQGINPEALSSVIKELRR 59

Required for gamma-tubulin complex recruitment to the centrosome.

Xenopus tropicalis (taxid: 8364)

>sp|Q8BUR9|MZT1_MOUSE Mitotic-spindle organizing protein 1 OS=Mus musculus GN=Mzt1 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 5/61 (8%)

Query: 71  DPEAARTA-----RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQ 125
            P AA +A     RE++D+   +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL+
Sbjct: 6   GPGAAASANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELR 65

Query: 126 R 126
           +
Sbjct: 66  K 66

Required for gamma-tubulin complex recruitment to the centrosome.

Mus musculus (taxid: 10090)

>sp|Q5U4M5|MZT1_XENLA Mitotic-spindle organizing protein 1 OS=Xenopus laevis GN=mzt1 PE=3 SV=2

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 39/49 (79%)

Query: 78  ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
            RE++D+   +S +L+TGLD  TLS+ + LC+ G+NPEAL++V+KEL+R
Sbjct: 11  VRETMDVLLEISRLLNTGLDMETLSICVRLCEQGINPEALSSVIKELRR 59

Required for gamma-tubulin complex recruitment to the centrosome.

Xenopus laevis (taxid: 8355)

>sp|Q08AG7|MZT1_HUMAN Mitotic-spindle organizing protein 1 OS=Homo sapiens GN=MZT1 PE=1 SV=2

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 39/49 (79%)

Query: 78  ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
            RE++D+   +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct: 21  VRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 69

Required for gamma-tubulin complex recruitment to the centrosome.

Homo sapiens (taxid: 9606)

>sp|P0C8Y1|MZT1_DANRE Mitotic-spindle organizing protein 1 OS=Danio rerio GN=mzt1 PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 39/49 (79%)

Query: 78  ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
            RE++D+   +S +L+TGLD  +LS+ + LC+ G+NPEAL++V+KEL+R
Sbjct: 12  VRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSSVIKELRR 60

Required for gamma-tubulin complex recruitment to the centrosome.

Danio rerio (taxid: 7955)

>sp|P0CP04|MZT1_CRYNJ Mitotic-spindle organizing protein 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNA01750 PE=3 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%)

Query: 71  DPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSP 130
           D    R ARE++D  + +S +L TGLD+ TLS+ + + + G NP+ LAAV+KEL+ E   
Sbjct: 6   DEAILRNARETIDSLYDLSQLLQTGLDKSTLSICVGMIEQGANPDTLAAVIKELRSENEA 65

Query: 131 SPPMSTA 137
               S A
Sbjct: 66  LNSQSNA 72

Required for gamma-tubulin complex recruitment to the centrosome.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
255582656	74	conserved hypothetical protein [Ricinus	0.514	0.986	0.837	6e-27
297741671	107	unnamed protein product [Vitis vinifera]	0.507	0.672	0.819	2e-26
225440121	73	PREDICTED: mitotic-spindle organizing pr	0.507	0.986	0.819	6e-26
356504256	73	PREDICTED: mitotic-spindle organizing pr	0.492	0.958	0.873	7e-26
388508796	74	unknown [Lotus japonicus]	0.507	0.972	0.849	8e-26
224139706	74	predicted protein [Populus trichocarpa]	0.514	0.986	0.810	4e-25
356496066	74	PREDICTED: mitotic-spindle organizing pr	0.408	0.783	0.965	4e-25
225444165	73	PREDICTED: mitotic-spindle organizing pr	0.5	0.972	0.788	1e-24
147821456	73	hypothetical protein VITISV_035447 [Viti	0.5	0.972	0.788	2e-24
449442255	71	PREDICTED: mitotic-spindle organizing pr	0.415	0.830	0.898	3e-24

>gi|255582656|ref|XP_002532107.1| conserved hypothetical protein [Ricinus communis] gi|223528210|gb|EEF30269.1| conserved hypothetical protein [Ricinus communis]

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 70/74 (94%), Gaps = 1/74 (1%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           MDPEAA+TARESLDLAFHMSNILDTGLDRHTLSVLIALCDLG+NPEALAAVVKEL+++PS
Sbjct: 1   MDPEAAKTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGLNPEALAAVVKELRQQPS 60

Query: 130 PSPPM-STAPSSIP 142
            SP + + APSS+P
Sbjct: 61  SSPSIPNHAPSSVP 74

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741671|emb|CBI32803.3| unnamed protein product [Vitis vinifera]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 64/72 (88%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           MDPEAA+TARESL+LAFHMSNILDTGLDRHTLSVLI LCDLG+NPEALAAVVKEL+RE  
Sbjct: 35  MDPEAAQTARESLELAFHMSNILDTGLDRHTLSVLITLCDLGLNPEALAAVVKELRRESC 94

Query: 130 PSPPMSTAPSSI 141
            S PM   PSS+
Sbjct: 95  SSSPMPETPSSV 106

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440121|ref|XP_002283004.1| PREDICTED: mitotic-spindle organizing protein 1B-like [Vitis vinifera]

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 64/72 (88%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           MDPEAA+TARESL+LAFHMSNILDTGLDRHTLSVLI LCDLG+NPEALAAVVKEL+RE  
Sbjct: 1   MDPEAAQTARESLELAFHMSNILDTGLDRHTLSVLITLCDLGLNPEALAAVVKELRRESC 60

Query: 130 PSPPMSTAPSSI 141
            S PM   PSS+
Sbjct: 61  SSSPMPETPSSV 72

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504256|ref|XP_003520913.1| PREDICTED: mitotic-spindle organizing protein 1B [Glycine max] gi|255633504|gb|ACU17110.1| unknown [Glycine max]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 65/71 (91%), Gaps = 1/71 (1%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQRE-P 128
           MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKEL++E P
Sbjct: 1   MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKEKP 60

Query: 129 SPSPPMSTAPS 139
           S S  +  APS
Sbjct: 61  SLSSSLPVAPS 71

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508796|gb|AFK42464.1| unknown [Lotus japonicus]

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/73 (84%), Positives = 65/73 (89%), Gaps = 1/73 (1%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQRE-P 128
           MDPEAAR ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALA VVKEL++E P
Sbjct: 1   MDPEAARIARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAVVVKELRKEKP 60

Query: 129 SPSPPMSTAPSSI 141
           S SP    APSS+
Sbjct: 61  SLSPSHPAAPSSL 73

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139706|ref|XP_002323237.1| predicted protein [Populus trichocarpa] gi|118481729|gb|ABK92804.1| unknown [Populus trichocarpa] gi|222867867|gb|EEF04998.1| predicted protein [Populus trichocarpa]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/74 (81%), Positives = 68/74 (91%), Gaps = 1/74 (1%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREP- 128
           MDPEAA+TAR+SL+LAFHMSN+LDTGLDRHTLSVLIALCDLG+NPEALAAVVKEL+REP 
Sbjct: 1   MDPEAAKTARDSLNLAFHMSNLLDTGLDRHTLSVLIALCDLGLNPEALAAVVKELRREPV 60

Query: 129 SPSPPMSTAPSSIP 142
           S S P S+AP + P
Sbjct: 61  SSSLPNSSAPVAKP 74

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496066|ref|XP_003516891.1| PREDICTED: mitotic-spindle organizing protein 1B-like [Glycine max]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/58 (96%), Positives = 58/58 (100%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQRE 127
           MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKEL++E
Sbjct: 1   MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKE 58

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444165|ref|XP_002270835.1| PREDICTED: mitotic-spindle organizing protein 1B isoform 1 [Vitis vinifera] gi|297740900|emb|CBI31082.3| unnamed protein product [Vitis vinifera]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 64/71 (90%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           MDPEA++TARE+LDL FHMSNIL+TGLDRHT+SVL+ALCDLG+NPEALAAVVKEL+REP 
Sbjct: 1   MDPEASQTAREALDLTFHMSNILETGLDRHTVSVLVALCDLGLNPEALAAVVKELRREPF 60

Query: 130 PSPPMSTAPSS 140
            S PM   PSS
Sbjct: 61  SSFPMPETPSS 71

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147821456|emb|CAN72259.1| hypothetical protein VITISV_035447 [Vitis vinifera]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129
           MDPEA++TARESLDL FHMSNIL+ GLDRHT+SVL+ALCDLG+NPEALAAVVKEL+REP 
Sbjct: 1   MDPEASQTARESLDLTFHMSNILEIGLDRHTVSVLVALCDLGLNPEALAAVVKELRREPF 60

Query: 130 PSPPMSTAPSS 140
            S PM   PSS
Sbjct: 61  SSFPMPETPSS 71

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442255|ref|XP_004138897.1| PREDICTED: mitotic-spindle organizing protein 1B-like isoform 1 [Cucumis sativus] gi|449442257|ref|XP_004138898.1| PREDICTED: mitotic-spindle organizing protein 1B-like isoform 2 [Cucumis sativus] gi|449477773|ref|XP_004155118.1| PREDICTED: mitotic-spindle organizing protein 1B-like isoform 1 [Cucumis sativus] gi|449477777|ref|XP_004155119.1| PREDICTED: mitotic-spindle organizing protein 1B-like isoform 2 [Cucumis sativus]

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 57/59 (96%)

Query: 70  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREP 128
           MD EAARTARESLDLAFHMSN+LD G+DRHTLSVLIALCD+GVNPEALAAVVKEL+REP
Sbjct: 1   MDQEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREP 59

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
TAIR|locus:2133687	71	GIP1 "AtGCP3 interacting prote	0.408	0.816	0.879	1.5e-21
TAIR|locus:2027859	67	GIP2 "GCP3-interacting protein	0.408	0.865	0.775	3.1e-19
UNIPROTKB|F1NY35	82	MZT1 "Uncharacterized protein"	0.338	0.585	0.541	9.4e-11
UNIPROTKB|B5FXZ4	72	mzt1 "Mitotic-spindle organizi	0.338	0.666	0.541	9.4e-11
UNIPROTKB|E1BHI9	80	MZT1 "Uncharacterized protein"	0.338	0.6	0.520	3.2e-10
UNIPROTKB|Q0VFD6	72	mzt1 "Mitotic-spindle organizi	0.338	0.666	0.520	3.2e-10
UNIPROTKB|Q5U4M5	72	mzt1 "Mitotic-spindle organizi	0.338	0.666	0.520	3.2e-10
UNIPROTKB|Q08AG7	82	MZT1 "Mitotic-spindle organizi	0.338	0.585	0.520	4.1e-10
UNIPROTKB|F1RJ34	78	MZT1 "Uncharacterized protein"	0.338	0.615	0.520	4.1e-10
MGI|MGI:1924039	78	Mzt1 "mitotic spindle organizi	0.338	0.615	0.520	4.1e-10

TAIR|locus:2133687 GIP1 "AtGCP3 interacting protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 51/58 (87%), Positives = 54/58 (93%)

Query:    70 MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQRE 127
             MD EA+RTARESL+L F MSNILDTGLDRHTLSVLIALCDLGVNPEALA VVKEL+RE
Sbjct:     1 MDEEASRTARESLELVFRMSNILDTGLDRHTLSVLIALCDLGVNPEALATVVKELRRE 58

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0008274 "gamma-tubulin ring complex" evidence=IPI

GO:0051418 "microtubule nucleation by microtubule organizing center" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=IMP

GO:0000930 "gamma-tubulin complex" evidence=IDA

GO:0005635 "nuclear envelope" evidence=IDA

GO:0005828 "kinetochore microtubule" evidence=IDA

GO:0007052 "mitotic spindle organization" evidence=IMP

GO:0009524 "phragmoplast" evidence=IDA

GO:0009574 "preprophase band" evidence=IDA

GO:0072686 "mitotic spindle" evidence=IDA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

TAIR|locus:2027859 GIP2 "GCP3-interacting protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 45/58 (77%), Positives = 53/58 (91%)

Query:    70 MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQRE 127
             M+ EAA TARESL+L F MSNIL+TGLDRHTLSVLIALCD+G+NPEALA +VKEL+R+
Sbjct:     1 MNQEAAETARESLELVFRMSNILETGLDRHTLSVLIALCDIGLNPEALATLVKELRRD 58

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0008274 "gamma-tubulin ring complex" evidence=IPI

GO:0051418 "microtubule nucleation by microtubule organizing center" evidence=IDA

UNIPROTKB|F1NY35 MZT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 26/48 (54%), Positives = 40/48 (83%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+ F +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct:    22 RETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 69

GO:0005813 "centrosome" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0008274 "gamma-tubulin ring complex" evidence=IEA

GO:0033566 "gamma-tubulin complex localization" evidence=IEA

UNIPROTKB|B5FXZ4 mzt1 "Mitotic-spindle organizing protein 1" [Taeniopygia guttata (taxid:59729)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 26/48 (54%), Positives = 40/48 (83%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+ F +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct:    12 RETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 59

GO:0005813 "centrosome" evidence=ISS

GO:0005819 "spindle" evidence=ISS

GO:0008274 "gamma-tubulin ring complex" evidence=ISS

GO:0033566 "gamma-tubulin complex localization" evidence=ISS

UNIPROTKB|E1BHI9 MZT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 25/48 (52%), Positives = 39/48 (81%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+   +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct:    20 RETMDILLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 67

GO:0033566 "gamma-tubulin complex localization" evidence=IEA

GO:0008274 "gamma-tubulin ring complex" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

UNIPROTKB|Q0VFD6 mzt1 "Mitotic-spindle organizing protein 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 25/48 (52%), Positives = 39/48 (81%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+   +S +L+TGLD  TLS+ + LC+ G+NPEAL++V+KEL+R
Sbjct:    12 RETMDVLLEISRLLNTGLDMETLSICVRLCEQGINPEALSSVIKELRR 59

GO:0005813 "centrosome" evidence=ISS

GO:0005819 "spindle" evidence=ISS

GO:0008274 "gamma-tubulin ring complex" evidence=ISS

GO:0033566 "gamma-tubulin complex localization" evidence=ISS

UNIPROTKB|Q5U4M5 mzt1 "Mitotic-spindle organizing protein 1" [Xenopus laevis (taxid:8355)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 25/48 (52%), Positives = 39/48 (81%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+   +S +L+TGLD  TLS+ + LC+ G+NPEAL++V+KEL+R
Sbjct:    12 RETMDVLLEISRLLNTGLDMETLSICVRLCEQGINPEALSSVIKELRR 59

GO:0005813 "centrosome" evidence=ISS

GO:0005819 "spindle" evidence=ISS

GO:0008274 "gamma-tubulin ring complex" evidence=ISS

GO:0033566 "gamma-tubulin complex localization" evidence=ISS

UNIPROTKB|Q08AG7 MZT1 "Mitotic-spindle organizing protein 1" [Homo sapiens (taxid:9606)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 25/48 (52%), Positives = 39/48 (81%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+   +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct:    22 RETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 69

GO:0005819 "spindle" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0008274 "gamma-tubulin ring complex" evidence=IDA

GO:0033566 "gamma-tubulin complex localization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1RJ34 MZT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 25/48 (52%), Positives = 39/48 (81%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+   +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct:    19 RETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 66

GO:0033566 "gamma-tubulin complex localization" evidence=IEA

GO:0008274 "gamma-tubulin ring complex" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

MGI|MGI:1924039 Mzt1 "mitotic spindle organizing protein 1" [Mus musculus (taxid:10090)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 25/48 (52%), Positives = 39/48 (81%)

Query:    79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126
             RE++D+   +S IL+TGLD  TLS+ + LC+ G+NPEAL++V+KEL++
Sbjct:    19 RETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 66

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=ISO

GO:0005819 "spindle" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0008274 "gamma-tubulin ring complex" evidence=ISO

GO:0033566 "gamma-tubulin complex localization" evidence=ISO

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M0N8	MZT1B_ARATH	No assigned EC number	0.7857	0.4859	0.9718	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	142
pfam12554	48	pfam12554, MOZART1, Mitotic-spindle organizing gam	1e-21

>gnl|CDD|221636 pfam12554, MOZART1, Mitotic-spindle organizing gamma-tubulin ring associated

 Score = 81.1 bits (201), Expect = 1e-21
 Identities = 30/47 (63%), Positives = 37/47 (78%)

Query: 78  ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKEL 124
           ARE LD+   +S++L+TGLDR  LS+ I L + GVNPEALAAVVKEL
Sbjct: 1   ARELLDVLHEISDLLNTGLDREALSICIELLEAGVNPEALAAVVKEL 47

The name MOZART is derived from letters of 'mitotic-spindle organizing proteins associated with a ring of gamma-tubulin'. This family operates as part of the gamma-tubulin ring complex, gamma-TuRC, one of the complexes necessary for chromosome segregation. This complex is located at centrosomes and mediates the formation of bipolar spindles in mitosis; it consists of six subunits. However, unlike the other four known subunits, this family does not carry the conserved 'Spc97-Spc98' GCP domain, so the TUBCGP nomenclature cannot be used for it. MOZART1 is required for gamma-TuRC recruitment to centrosomes. Length = 48

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
PF12554	48	MOZART1: Mitotic-spindle organizing gamma-tubulin	99.94
PF12926	88	MOZART2: Mitotic-spindle organizing gamma-tubulin	97.04
cd04774	96	HTH_YfmP Helix-Turn-Helix DNA binding domain of th	82.71

>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes

Probab=99.94  E-value=3.3e-27  Score=155.06  Aligned_cols=48  Identities=65%  Similarity=1.007  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 040572           78 ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQ  125 (142)
Q Consensus        78 ArEtLDiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELR  125 (142)
                      |+++||++|+||+||||||||+||+|||+|||+||||||||+||||||
T Consensus         1 a~~~~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    1 ARETLDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             CchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            579999999999999999999999999999999999999999999997

Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.

>PF12926 MOZART2: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR024332 The MOZART2 family of proteins (also known as FAM128 and Mitotic-spindle organizing protein 2) operate as part of the gamma-tubulin ring complex, gamma-TuRC, one of the complexes necessary for chromosome segregation

Probab=97.04  E-value=0.0032  Score=46.42  Aligned_cols=58  Identities=16%  Similarity=0.354  Sum_probs=48.7

Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 040572           84 LAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSPSPPMSTAPSSI  141 (142)
Q Consensus        84 iL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a~~~~~~~p~~~  141 (142)
                      -|||+.++=..++|.+-+.|++.|+..+|.|+|+..+.|.|---.......+..|.++
T Consensus        29 EL~ELa~~AGv~~dp~VFriildLL~~nVsP~AI~qmLK~m~s~~~~~~~~~~~~~~~   86 (88)
T PF12926_consen   29 ELYELAQLAGVPMDPEVFRIILDLLRLNVSPDAIFQMLKSMCSGSRLASTAPGDPASA   86 (88)
T ss_pred             HHHHHHHHhCCCcChHHHHHHHHHHHcCCCHHHHHHHHHHHHcccccCccCCCCcccc
Confidence            6899999999999999999999999999999999999999976666544434444443

This complex is located at centrosomes and mediates the formation of bipolar spindles in mitosis; it consists of six subunits. However, unlike the other four known subunits, the MOZART proteins, both 1 and 2, do not carry the conserved 'Spc97-Spc98' GCP domain, so the TUBGCP nomenclature cannot be used for it. The exact function of MOZART2 is not clear [].

>cd04774 HTH_YfmP Helix-Turn-Helix DNA binding domain of the YfmP transcription regulator

Probab=82.71  E-value=5.4  Score=28.10  Aligned_cols=48  Identities=13%  Similarity=0.131  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhCCCCHHH--HHHHHHHHHhC
Q 040572           80 ESLDLAFHMSNILD-TGLDRHTLSVLIALCDLGVNPEA--LAAVVKELQRE  127 (142)
Q Consensus        80 EtLDiL~EIS~LLN-TGLDReTLsICI~LcE~GVNPEA--LA~VIKELRrE  127 (142)
                      +.+..|..|-.|.+ .|++-+.+.-++++++.|++.+.  ...++.+++..
T Consensus        41 ~dv~~l~~I~~L~~~~G~~l~ei~~~l~~~~~~~~~~~~~~~~~l~~~~~~   91 (96)
T cd04774          41 EDLKRLERILRLREVLGFSLQEVTHFLERPLEPVDGGHRYSAESLREIHDA   91 (96)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHhccccccchhHHHHHHHHHHHHHH
Confidence            66788999999999 99999999999999999986665  55666666543

Helix-turn-helix (HTH) transcription regulator, YfmP, and related proteins; N-terminal domain. YfmP regulates the multidrug efflux protein, YfmO, and indirectly regulates the expression of the Bacillus subtilis copZA operon encoding a metallochaperone, CopZ, and a CPx-type ATPase efflux protein, CopA. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	142
3s4o_A	167	Protein tyrosine phosphatase-like protein; structu	81.28

>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}

Probab=81.28  E-value=4.9  Score=27.05  Aligned_cols=33  Identities=27%  Similarity=0.463  Sum_probs=28.1

Q ss_pred             CCCCHHHHHHHHHHHhC-CCCHHHHHHHHHHHHh
Q 040572           94 TGLDRHTLSVLIALCDL-GVNPEALAAVVKELQR  126 (142)
Q Consensus        94 TGLDReTLsICI~LcE~-GVNPEALA~VIKELRr  126 (142)
                      .|.+|...-+++-|+.. |++++...+.|++.|.
T Consensus       118 aG~~RTg~~~a~~L~~~~~~~~~~a~~~vr~~R~  151 (167)
T 3s4o_A          118 AGLGRAPILVALALVEYGNVSALDAIALIREKRK  151 (167)
T ss_dssp             SSSSHHHHHHHHHHHHTTCCCHHHHHHHHHHHST
T ss_pred             CCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHCC
Confidence            39999999999999998 9999988777777664

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00