Citrus Sinensis ID: 040598
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| 224105367 | 451 | predicted protein [Populus trichocarpa] | 0.954 | 0.558 | 0.515 | 2e-67 | |
| 224105371 | 451 | predicted protein [Populus trichocarpa] | 0.954 | 0.558 | 0.515 | 3e-67 | |
| 255587870 | 447 | Anthranilate N-benzoyltransferase protei | 0.958 | 0.565 | 0.513 | 7e-65 | |
| 224117256 | 451 | predicted protein [Populus trichocarpa] | 0.954 | 0.558 | 0.5 | 8e-64 | |
| 255585363 | 452 | Anthranilate N-benzoyltransferase protei | 0.969 | 0.566 | 0.461 | 4e-61 | |
| 255577416 | 443 | Anthranilate N-benzoyltransferase protei | 0.962 | 0.573 | 0.453 | 7e-55 | |
| 56967598 | 457 | acetyl CoA geraniol/citronellol acetyltr | 0.965 | 0.557 | 0.391 | 1e-53 | |
| 254771939 | 450 | alcohol acyltransferase [Fragaria chiloe | 0.935 | 0.548 | 0.425 | 2e-53 | |
| 374498907 | 459 | alcohol acyl-transferase [Rosa rugosa] | 0.973 | 0.559 | 0.388 | 4e-53 | |
| 10121328 | 452 | alcohol acyltransferase [Fragaria x anan | 0.943 | 0.550 | 0.410 | 9e-53 |
| >gi|224105367|ref|XP_002333826.1| predicted protein [Populus trichocarpa] gi|222838645|gb|EEE77010.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/266 (51%), Positives = 176/266 (66%), Gaps = 14/266 (5%)
Query: 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPMRNTH-LKGTQISTQ 59
M +SI+S+E+++PSS +H L PFK+SLLDQL PTT+ P++ FYP N KG QIS Q
Sbjct: 1 MDVSIISRELIKPSSPSIHHLLPFKLSLLDQLLPTTYVPMVFFYPRNNNQDFKGLQISIQ 60
Query: 60 LKESLSKTLDPLYPFAARVRENLIINDYDEGVPYIETRVNTHLFEFLQNPPMELLDQCLP 119
LK SLS+TL YPF+ RVR N II++Y++G P++ETRV LF+FL P + LL++ LP
Sbjct: 61 LKRSLSQTLSTFYPFSGRVRNNSIIDNYEKGAPFVETRVKGSLFDFLIQPQLNLLNKFLP 120
Query: 120 YAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASACHEAVTSKN----- 174
PF YQ +P+ P A+Q+NTFDCGG ALGLC SHK ID ATA A ++ +
Sbjct: 121 CQPFGYQSDPEATPQVAIQVNTFDCGGTALGLCFSHKIIDVATAIAFLDSWAANTRGHYL 180
Query: 175 ------LSEASIIFPPQNPSPNHH-LSVMEKIWFREAKSKTRRFVFDAKAIASLRSECKG 227
L EAS FPPQN L V E F+E + T+RFVFDA AIA+LR++ K
Sbjct: 181 EQINPALFEASSRFPPQNKFLVQFPLWVAENYLFKEG-NVTKRFVFDADAIATLRAKAKS 239
Query: 228 ERVPNPTRIEALSAFILKSAMLASRS 253
+RVPNP+R E L+AFI KS A RS
Sbjct: 240 KRVPNPSRTETLTAFIWKSCTEACRS 265
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224105371|ref|XP_002333827.1| predicted protein [Populus trichocarpa] gi|222838646|gb|EEE77011.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255587870|ref|XP_002534423.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223525320|gb|EEF27961.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224117256|ref|XP_002317521.1| predicted protein [Populus trichocarpa] gi|222860586|gb|EEE98133.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255585363|ref|XP_002533378.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223526785|gb|EEF29009.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255577416|ref|XP_002529587.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223530920|gb|EEF32779.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|56967598|gb|AAW31948.1| acetyl CoA geraniol/citronellol acetyltransferase [Rosa hybrid cultivar] | Back alignment and taxonomy information |
|---|
| >gi|254771939|gb|ACT82247.1| alcohol acyltransferase [Fragaria chiloensis] | Back alignment and taxonomy information |
|---|
| >gi|374498907|gb|AEZ53172.1| alcohol acyl-transferase [Rosa rugosa] | Back alignment and taxonomy information |
|---|
| >gi|10121328|gb|AAG13130.1|AF193789_1 alcohol acyltransferase [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| TAIR|locus:2092090 | 442 | AT3G26040 [Arabidopsis thalian | 0.950 | 0.567 | 0.353 | 1.3e-36 | |
| TAIR|locus:2152783 | 426 | AT5G47950 [Arabidopsis thalian | 0.969 | 0.600 | 0.317 | 1.3e-29 | |
| TAIR|locus:2130065 | 446 | AT4G15390 [Arabidopsis thalian | 0.977 | 0.578 | 0.321 | 2.7e-29 | |
| TAIR|locus:2024061 | 436 | AT1G24420 [Arabidopsis thalian | 0.924 | 0.559 | 0.348 | 5e-28 | |
| TAIR|locus:2102936 | 443 | AT3G30280 [Arabidopsis thalian | 0.962 | 0.573 | 0.305 | 6.4e-28 | |
| TAIR|locus:2178667 | 428 | AT5G23970 [Arabidopsis thalian | 0.928 | 0.572 | 0.325 | 3.2e-26 | |
| TAIR|locus:2024036 | 435 | AT1G24430 [Arabidopsis thalian | 0.901 | 0.547 | 0.319 | 5.8e-24 | |
| TAIR|locus:2152763 | 443 | AT5G47980 [Arabidopsis thalian | 0.924 | 0.550 | 0.313 | 2e-22 | |
| TAIR|locus:2130075 | 435 | BIA1 "BRASSINOSTEROID INACTIVA | 0.924 | 0.560 | 0.310 | 1.9e-20 | |
| TAIR|locus:2059109 | 451 | SHT "spermidine hydroxycinnamo | 0.515 | 0.301 | 0.310 | 2.7e-09 |
| TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 95/269 (35%), Positives = 154/269 (57%)
Query: 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPMRNTHLKGTQISTQL 60
M + +VS+++++PSS + LK FK+SLL+QL PT F P++ FY N+ +K T+ L
Sbjct: 1 MRVDVVSRDIIKPSSPTPNHLKKFKLSLLEQLGPTIFGPMVFFYSANNS-IKPTEQLQML 59
Query: 61 KESLSKTLDPLYPFAARVRENLIINDYDEGVPYIETRVNTHLFEFLQNPPMELLDQCLPY 120
K+SLS+TL YP A R++ N+ I+ D G ++E RVN+ L L P + L Q +P
Sbjct: 60 KKSLSETLTHFYPLAGRLKGNISIDCNDSGADFLEARVNSPLSNLLLEPSSDSLQQLIPT 119
Query: 121 APFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASACHE---AVTSKNLSE 177
+ S + + Q + F+CG +++G+C+SHK D + + A++S+ +
Sbjct: 120 SVDSIETRTRLL---LAQASFFECGSMSIGVCISHKLADATSIGLFMKSWAAISSRGSIK 176
Query: 178 ---ASI-----IFPPQNPSPNHHLSVME-KIWFREAKSKTRRFVFDAKAIASLRSECKGE 228
A + IFPP N S V+E +I + SK RF+FD+ +I +L+++
Sbjct: 177 TIGAPVFDTVKIFPPGNFSETSPAPVVEPEIMMNQTLSK--RFIFDSSSIQALQAKASSF 234
Query: 229 RVPNPTRIEALSAFILKSAMLASRSTANS 257
V PTR+EA+SA I KSAM A+R+ + +
Sbjct: 235 EVNQPTRVEAVSALIWKSAMKATRTVSGT 263
|
|
| TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2059109 SHT "spermidine hydroxycinnamoyl transferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 264 | |||
| PLN00140 | 444 | PLN00140, PLN00140, alcohol acetyltransferase fami | 1e-113 | |
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 8e-34 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 1e-12 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 8e-12 | |
| PLN02663 | 431 | PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate | 1e-09 |
| >gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = e-113
Identities = 147/265 (55%), Positives = 190/265 (71%), Gaps = 12/265 (4%)
Query: 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPMRNTH-LKGTQISTQ 59
M +SI+S+E+++PSS +H LKPFK+SLLDQLTPTT+ P+I FYP N KG QIS Q
Sbjct: 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQ 60
Query: 60 LKESLSKTLDPLYPFAARVRENLIINDYDEGVPYIETRVNTHLFEFLQNPPMELLDQCLP 119
LK SLS+TL YPF+ RV++NLII++Y+EGVP+ ETRV L +FL++P +ELL++ LP
Sbjct: 61 LKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLP 120
Query: 120 YAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASACHEA---------- 169
PFSY+ +P+ +P A+Q+NTFDCGGIALGLC SHK ID ATASA ++
Sbjct: 121 CQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRGHYS 180
Query: 170 -VTSKNLSEASIIFPPQNPSPNHHLSVMEKIWFREAKSKTRRFVFDAKAIASLRSECKGE 228
V + +L EAS FPP N P L +ME+ WF + T+RFVFDAKAIA+LR++ K +
Sbjct: 181 EVINPDLFEASSFFPPLNSFPVQFLLLMEENWFFKENYITKRFVFDAKAIATLRAKAKSK 240
Query: 229 RVPNPTRIEALSAFILKSAMLASRS 253
RVPNP+RIE LS FI K ASRS
Sbjct: 241 RVPNPSRIETLSCFIWKCCTAASRS 265
|
Length = 444 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 97.74 | |
| PF03007 | 263 | WES_acyltransf: Wax ester synthase-like Acyl-CoA a | 96.49 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 96.34 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 94.57 | |
| PF00668 | 301 | Condensation: Condensation domain; InterPro: IPR00 | 90.18 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 88.76 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 88.58 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 87.71 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 85.86 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 84.17 |
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-54 Score=398.96 Aligned_cols=259 Identities=25% Similarity=0.344 Sum_probs=210.4
Q ss_pred CeEEEEeeEEeeCCCCCCCCCccccCCcccccCCCCCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec-
Q 040598 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR- 79 (264)
Q Consensus 1 ~~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~~~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~- 79 (264)
|.|++.++++|+|+.|||.+ .++||+|||.++++|++.+|||+.++.. +..+++++||+||+++|++||||||||+
T Consensus 1 ~~v~~~~~~~v~Ps~ptp~~--~~~LS~lD~~~~~~~v~~v~fy~~~~~~-~~~~~~~~Lk~sLs~~L~~fyplAGRl~~ 77 (447)
T PLN03157 1 MVVILKASYTVKPAKPTWTG--RRSLSEWDQVGTITHVPTIYFYSPPWNT-SSGSIIEILKDSLSRALVPFYPLAGRLRW 77 (447)
T ss_pred CeEEEeccEEECCCCCCCCC--ccCCChhhhccccccCCEEEEEeCCCcc-ccccHHHHHHHHHHHHHhhccccCEEEEE
Confidence 78999999999999999975 5999999998889999999999875432 2345689999999999999999999997
Q ss_pred ---CceEEecCCCCcceEEEEeeeehhhhcCCCChhhhcccCCCCCCCCCCCCCCCCeeEEEEeEeecCcEEEEEeeeee
Q 040598 80 ---ENLIINDYDEGVPYIETRVNTHLFEFLQNPPMELLDQCLPYAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHK 156 (264)
Q Consensus 80 ---~~~~i~c~~~Gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~ 156 (264)
|+++|+|||+||+|+||+++.+++|+.+......+.+|+|..+.. ....+.|+++||||+|.|||++||+++||.
T Consensus 78 ~~~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~~~~~~~~~l~P~~~~~--~~~~~~Pll~vQvT~F~cGG~~lg~~~~H~ 155 (447)
T PLN03157 78 IGGGRLELECNAMGVLLIEAESEAKLDDFGDFSPTPEFEYLIPSVDYT--KPIHELPLLLVQLTKFSCGGISLGLGISHA 155 (447)
T ss_pred cCCCcEEEEECCCCeEEEEEEeCCcHHHhhccCCCHHHHhhcCCCCcc--cccccCceEEEEEEEecCCCEEEEEEeecc
Confidence 589999999999999999999999997633334466788865331 224467999999999999999999999999
Q ss_pred ecccccccc---------cCCCCccCCccCccccCCCCCCC--C--CCCCCccccc--------ccccCceeEEEEEeCH
Q 040598 157 FIDGATASA---------CHEAVTSKNLSEASIIFPPQNPS--P--NHHLSVMEKI--------WFREAKSKTRRFVFDA 215 (264)
Q Consensus 157 v~Dg~~~~~---------rg~~~~~~P~~dr~~l~~~~~~~--~--~~p~~~~~~~--------~~~~~~~~~~~f~fs~ 215 (264)
++||.|+.+ ||.....+|++||+.+.++..+. + +++++..++. .....+++.++|+|++
T Consensus 156 v~Dg~~~~~fl~aWA~~~rg~~~~~~P~~dR~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~ 235 (447)
T PLN03157 156 VADGQSALHFISEWARIARGEPLGTVPFLDRKVLRAGEPPLSAPVFDHAEFSHPPLLIGEQDNVEERKKKTTVAMLKLSK 235 (447)
T ss_pred ccchHhHHHHHHHHHHHhcCCCCCCCCccCcccccCCCCCCcCCccChhhcccCcccccccccccccccCceEEEEEECH
Confidence 999999999 88766678999998776432221 1 2223221110 0113467889999999
Q ss_pred HHHHHHHHhccCC----CCCCCChhHHHHHHHHHHHHHHhCCCCCCCceeecC
Q 040598 216 KAIASLRSECKGE----RVPNPTRIEALSAFILKSAMLASRSTANSRFVLHQA 264 (264)
Q Consensus 216 ~~i~~LK~~~~~~----~~~~~St~dal~A~iW~~~~rAr~~~~~~~~~~~~~ 264 (264)
++|++||+.+... +..++||||+|+||+|+|++|||+..+++.+.|.+|
T Consensus 236 ~~i~~LK~~a~~~~~~~~~~~~St~dalsA~lWr~~~rAr~~~~~~~~~l~~~ 288 (447)
T PLN03157 236 DQVEKLKDKANESRSSDNGRPYTRYETVAGHVWRSACKARGHEPEQPTALGIC 288 (447)
T ss_pred HHHHHHHHhCcccccccCCCCccHHHHHHHHHHHHHHHHccCCCCCceEEEEE
Confidence 9999999999764 235799999999999999999999888899888774
|
|
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins | Back alignment and domain information |
|---|
| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
| >PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 264 | ||||
| 2bgh_A | 421 | Crystal Structure Of Vinorine Synthase Length = 421 | 3e-32 | ||
| 4g2m_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 1e-07 | ||
| 4g0b_A | 436 | Structure Of Native Hct From Coffea Canephora Lengt | 1e-07 | ||
| 4g22_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 2e-06 |
| >pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 | Back alignment and structure |
|
| >pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 | Back alignment and structure |
| >pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 | Back alignment and structure |
| >pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 264 | |||
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 8e-51 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 2e-46 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 6e-36 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 5e-34 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 2e-25 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 |
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 8e-51
Identities = 84/270 (31%), Positives = 129/270 (47%), Gaps = 19/270 (7%)
Query: 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPM-RNTHLKGTQISTQ 59
+ VS+E++ PSS LK +KIS LDQL T P ILFYP +++L Q S
Sbjct: 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQH 62
Query: 60 LKESLSKTLDPLYPFAARVRENLIINDYDEGVPYIETRVNTHLFEFLQN-PPMELLDQCL 118
LK+SLSK L YP A R+ N ++ D GVP++E RV L + +QN +E LDQ L
Sbjct: 63 LKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYL 122
Query: 119 PYAPFSYQPNPD-QVPHAAVQLNTFDCGGIALGLCLSHKFIDGATAS---------ACHE 168
P A + + AV+++ F+CGG A+G+ LSHK D + + E
Sbjct: 123 PSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGE 182
Query: 169 AVTSKNLSEASIIFPPQNPSPNHHLSVMEKIWFREAKSKTRRFVFDAKAIASLRSECKGE 228
+ + P + V + +RFVFD + I +LR++
Sbjct: 183 TEIVLPNFDLAARHFPPVDNTPSPELV------PDENVVMKRFVFDKEKIGALRAQASSA 236
Query: 229 -RVPNPTRIEALSAFILKSAMLASRSTANS 257
N +R++ + A+I K + +R+ +
Sbjct: 237 SEEKNFSRVQLVVAYIWKHVIDVTRAKYGA 266
|
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 96.97 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 94.48 | |
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 93.26 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 92.69 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 91.1 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 88.05 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-54 Score=395.91 Aligned_cols=258 Identities=21% Similarity=0.299 Sum_probs=210.5
Q ss_pred CeEEEEeeEEeeCCCCCCCCCccccCCcccccCCCCCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec-
Q 040598 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR- 79 (264)
Q Consensus 1 ~~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~~~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~- 79 (264)
|+|+|.++++|+|+.|||.+ .++||+||+++++.|++.+|||+.++. +....+++||+||+++|++||||||||+
T Consensus 6 ~~V~i~~~~~V~P~~~tp~~--~~~LS~lD~~~~~~~~~~~~~y~~~~~--~~~~~~~~Lk~sLs~~L~~f~plAGRl~~ 81 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPGR--NLWNSNVDLVVPNFHTPSVYFYRPTGS--SNFFDAKVLKDALSRALVPFYPMAGRLKR 81 (439)
T ss_dssp CCEEEEEEEEECCSSCCCCC--EECCCHHHHSCCTTCCCEEEEECCCSC--TTTTCHHHHHHHHHHHTTTTGGGGCEEEE
T ss_pred eEEEEeeeEEEeCCCCCCCC--eecCChhHhCccccceeeEEEEcCCCC--ccccHHHHHHHHHHHHHhhccccceeeee
Confidence 68999999999999999864 599999999988899999999997543 2345789999999999999999999997
Q ss_pred ---CceEEecCCCCcceEEEEeeeehhhhcCCCChhhhcccCCCCCCCCCCCCCCCCeeEEEEeEeecCcEEEEEeeeee
Q 040598 80 ---ENLIINDYDEGVPYIETRVNTHLFEFLQNPPMELLDQCLPYAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHK 156 (264)
Q Consensus 80 ---~~~~i~c~~~Gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~ 156 (264)
|+++|+||++||.|+||+++.+++|+.+......+++|+|..+.. ....+.|++.||||+|+|||++||+++||.
T Consensus 82 ~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~--~~~~~~pll~vQvT~f~cGG~~lg~~~~H~ 159 (439)
T 4g22_A 82 DEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYS--QGISSYALLVLQVTYFKCGGVSLGVGMRHH 159 (439)
T ss_dssp CTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTT--SCTTSSCSEEEEEEECTTSCEEEEEEECTT
T ss_pred CCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc--cccccCceeEEEEEEecCCCEEEEEEeeec
Confidence 589999999999999999999999997632233456788865431 224568999999999999999999999999
Q ss_pred ecccccccc---------cCCCCccCCccCccccCCCCCC--CCCCCCCccccc----c----ccc-CceeEEEEEeCHH
Q 040598 157 FIDGATASA---------CHEAVTSKNLSEASIIFPPQNP--SPNHHLSVMEKI----W----FRE-AKSKTRRFVFDAK 216 (264)
Q Consensus 157 v~Dg~~~~~---------rg~~~~~~P~~dr~~l~~~~~~--~~~~p~~~~~~~----~----~~~-~~~~~~~f~fs~~ 216 (264)
++||.|+++ ||.+....|++||+.+.+...+ ..+|.+|..+.. . ... .+++.++|+|+++
T Consensus 160 v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~ 239 (439)
T 4g22_A 160 AADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTRE 239 (439)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHH
Confidence 999999998 8876677899999877532111 113444431110 0 112 5789999999999
Q ss_pred HHHHHHHhccCCC-CCCCChhHHHHHHHHHHHHHHhCCCCCCCceeecC
Q 040598 217 AIASLRSECKGER-VPNPTRIEALSAFILKSAMLASRSTANSRFVLHQA 264 (264)
Q Consensus 217 ~i~~LK~~~~~~~-~~~~St~dal~A~iW~~~~rAr~~~~~~~~~~~~~ 264 (264)
+|++||+.+.++. ..++||||+|+||+|||++|||++++++.+.|.+|
T Consensus 240 ~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~ 288 (439)
T 4g22_A 240 QISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIA 288 (439)
T ss_dssp HHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred HHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEE
Confidence 9999999998653 46899999999999999999999998998888764
|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
|---|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| d1l5aa1 | 174 | VibH {Vibrio cholerae [TaxId: 666]} | 95.6 | |
| d1q9ja1 | 175 | Polyketide synthase associated protein 5, PapA5 {M | 95.58 |
| >d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: VibH species: Vibrio cholerae [TaxId: 666]
Probab=95.60 E-value=0.012 Score=44.25 Aligned_cols=96 Identities=16% Similarity=0.109 Sum_probs=57.7
Q ss_pred hHHHHHHHHHhhccccCCccceec--CceEEecCCCCcceEEEEeeeehhhhcCCCCh--h---hhcccCCCCCCCCCCC
Q 040598 56 ISTQLKESLSKTLDPLYPFAARVR--ENLIINDYDEGVPYIETRVNTHLFEFLQNPPM--E---LLDQCLPYAPFSYQPN 128 (264)
Q Consensus 56 ~~~~Lk~sL~~~L~~~p~lAGrl~--~~~~i~c~~~Gv~f~~a~~~~~l~~l~~~p~~--~---~~~~l~p~~~~~~~~~ 128 (264)
..+.|++++..++..+|-|--++. +.....--...+ .+.++...... . ......-.+ + +
T Consensus 34 d~~~l~~A~~~l~~rh~~LRt~f~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~---d- 99 (174)
T d1l5aa1 34 DTTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPPI---------DYQDLSIHLEAEPLAWRQIEQDLQRS-S---T- 99 (174)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTTCCEEECSSCCCC---------EEEECTTCTTHHHHHHHHHHHHHTSC-C---C-
T ss_pred CHHHHHHHHHHHHHhCchheEEEeccCcEEEEEEeece---------eeEecccccchHHHHHHHHHHHHhCC-c---c-
Confidence 489999999999999999877764 111111011111 11122111110 0 011111111 1 1
Q ss_pred CCCCCeeEEEEeEeecCcEEEEEeeeeeecccccccc
Q 040598 129 PDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASA 165 (264)
Q Consensus 129 ~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~ 165 (264)
..+.|++.+.+-+...|...+.+.+||.++||.|+..
T Consensus 100 l~~~pl~r~~l~~~~~~~~~l~~~~hHii~Dg~S~~~ 136 (174)
T d1l5aa1 100 LIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMML 136 (174)
T ss_dssp CBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHH
T ss_pred ccCCCcEEEEEEEeCCCceEEeeecccEEEcHhHHHH
Confidence 3356888888877778999999999999999999887
|
| >d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|