Citrus Sinensis ID: 040602

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
Protein Sequence
MNSMSFLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALFF
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccEEEEEEEccccccccEEEEEEEEEccccccccccEEEcccccccccccHHHHccccccEEEEEEEEEEEEcccccccHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHcccccccccccccccccccccEEEEEccccccccHHHHHHHcccccccEEEEEEEccccccccHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHEEEEEEEEccccccccHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MNSMSFLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDsldlldfstdELSCLYTFVFNktrklngsgdlsSDLRTWLSAALINhetcidgfdgtNSIVKELLTmvhpspnqwsngfsnsnsggkgcggggksingvqGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKrgliplphwDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVltpffnptiYASLSLFVDMALFF
Flexible Loop (DISEMBL)
MNSMSFLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALFF
Low Complexity Region (SEG)
MNSMSFLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIdaslslfvdsldlldfstdelsCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWsngfsnsnsggkgcggggksingvqgdvvvaadgTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALFF
Disordered region (IsUnstruct)
*****FLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVH************************KSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALF*
Disordered Region (DISOPRED)
*****F**NLHHRSVFMKSLPSLLWRSVMVG******************SLFVDSLDLLDFSTDELSCL******************SDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALFF
Disordered Region (DISEMBL)
MNSMSFLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALFF
Disordered Region (DISPRO)
***MSFLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWSNGFSNS**********GKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALFF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSMSFLLNLHHRSVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNLHYKSVFMKSLPSLLWRSVMVGVVVNVLTPFFNPTIYASLSLFVDMALFF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	277	2.2.26 [Sep-21-2011]
Q43062	522	Pectinesterase/pectineste	N/A	no	0.545	0.289	0.447	2e-30
Q9SMY7	525	Probable pectinesterase/p	yes	no	0.638	0.337	0.372	1e-24
Q9LXK7	527	Probable pectinesterase/p	no	no	0.581	0.305	0.387	5e-24
Q9FK05	587	Probable pectinesterase/p	no	no	0.454	0.214	0.287	5e-08
P09607	550	Pectinesterase 2.1 OS=Sol	N/A	no	0.476	0.24	0.306	3e-07
Q96575	550	Pectinesterase 2.2 OS=Sol	N/A	no	0.480	0.241	0.298	4e-07
P14280	546	Pectinesterase 1 OS=Solan	N/A	no	0.476	0.241	0.300	8e-07
Q96576	544	Pectinesterase 3 OS=Solan	N/A	no	0.480	0.244	0.268	4e-06
Q9M3B0	598	Probable pectinesterase/p	no	no	0.566	0.262	0.258	4e-06
Q9FJ21	571	Probable pectinesterase/p	no	no	0.480	0.232	0.290	8e-06

>sp|Q43062|PME_PRUPE Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/190 (44%), Positives = 106/190 (55%), Gaps = 39/190 (20%)

Query: 30  VGVVVNILTPFFNQTIDASLSLFV-DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSS 88
           V  V +IL+ F N   D  L+  + D LDLLDFS DEL+   +   N+  K N +G LSS
Sbjct: 67  VQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSLSASQNQKGKNNSTGKLSS 126

Query: 89  DLRTWLSAALINHETCIDGFDGTNSI---------------VKELLTMVHPSPNQWSNGF 133
           DLRTWLSAAL+N +TC +GF+GTNSI               V+ELLT VHP+ NQ     
Sbjct: 127 DLRTWLSAALVNQDTCSNGFEGTNSIVQGLISAGLGQVTSLVQELLTQVHPNSNQ----- 181

Query: 134 SNSNSGGKGCGGGGKS-----------INGVQGDVVVAADGTWNFTKIMDTVLATKDYNM 182
                  +G  G   S            +GV  D +VA DGT NFT + D VLA  DY+M
Sbjct: 182 -------QGPNGQIPSWVKTKDRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSM 234

Query: 183 KRFVIYIKRG 192
           +R+VIYIKRG
Sbjct: 235 RRYVIYIKRG 244

May have roles in the deposition of pectin in developing tissues and in the wall loosening and cell separation that occurs in cell expansion, fruit ripening and abscission.
Prunus persica (taxid: 3760)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 1

>sp|Q9SMY7|PME44_ARATH Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 109/220 (49%), Gaps = 43/220 (19%)

Query: 14  SVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFV-DSLDLLDFSTDELSCLYTF 72
           S F+ S+ +++   V++  V +IL+ F + + D  L   V D LDLLDFS++EL+   + 
Sbjct: 33  SEFVSSINTIV---VVIRQVSSILSQFADFSGDRRLQNAVSDCLDLLDFSSEELTWSASA 89

Query: 73  VFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVK---------------E 117
             N   K NG+GD+ SD RTWLSAAL N  TC++GFDGT+ +VK               E
Sbjct: 90  SENPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGFDGTSGLVKSLVAGSLDQLYSMLRE 149

Query: 118 LLTMVHPSPNQWSNGFSNSNSGGKGCGGGGK------------------------SINGV 153
           LL +V P     +       + G     G K                          NG 
Sbjct: 150 LLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQFPDWVRPDDRKLLESNGR 209

Query: 154 QGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
             DV VA DGT NFTKIMD +    DY+  RFVIYIK+GL
Sbjct: 210 TYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGL 249

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q9LXK7|PME32_ARATH Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1

 Score =  111 bits (278), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 103/191 (53%), Gaps = 30/191 (15%)

Query: 33  VVNILTPFFNQTIDASLS-LFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR 91
            V I++ F  +   + +S   VD +DLLD + +ELS + +   +   K N +GD+ SDLR
Sbjct: 61  AVAIVSKFDKKAGKSRVSNAIVDCVDLLDSAAEELSWIISASQSPNGKDNSTGDVGSDLR 120

Query: 92  TWLSAALINHETCIDGFDGTNSIVKE---------------LLTMVHPSPNQWSNGFSNS 136
           TW+SAAL N +TC+DGF+GTN I+K+               LLTMVH  P++       +
Sbjct: 121 TWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSKPKPKPIKA 180

Query: 137 NSGGKGCGGGGK--------------SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNM 182
            +  K   G  K              + N    D VVAADGT NFT I D VLA  DY+ 
Sbjct: 181 QTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVAADGTGNFTTISDAVLAAPDYST 240

Query: 183 KRFVIYIKRGL 193
           KR+VI++KRG+
Sbjct: 241 KRYVIHVKRGV 251

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q9FK05|PME61_ARATH Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 75/188 (39%), Gaps = 62/188 (32%)

Query: 50  SLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNG----SGDLS-SDLRTWLSAALINHETC 104
           S +   L+LLD S D L          TR L+     SGD S SD+ TWLS+A+ NH+TC
Sbjct: 139 SAYDSCLELLDDSVDAL----------TRALSSVVVVSGDESHSDVMTWLSSAMTNHDTC 188

Query: 105 IDGFDGTNSIVKELLTMVHPSPNQWSNGFSNSNSGGKGC----GGGGKSINGV------- 153
            DGFD       E+   V  +    S   SN       C     G  K ++GV       
Sbjct: 189 TDGFDEIEGQGGEVKDQVIGAVKDLSEMVSN-------CLAIFAGKVKDLSGVPVVNNRK 241

Query: 154 -----------------------------QGDVVVAADGTWNFTKIMDTVLATKDYNMKR 184
                                        Q D+ V+ DG+  F  I + +    +++ +R
Sbjct: 242 LLGTEETEELPNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAIKKAPEHSSRR 301

Query: 185 FVIYIKRG 192
           FVIY+K G
Sbjct: 302 FVIYVKAG 309

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|P09607|PME21_SOLLC Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 68/163 (41%), Gaps = 31/163 (19%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFD-- 109
             D L+LLD S D L C      +K  +        ++ ++WLS  L NH TC+D  D  
Sbjct: 120 LTDCLELLDLSVD-LVCDSIAAIDKRSRSE-----HANAQSWLSGVLTNHVTCLDELDSF 173

Query: 110 ------GTN-----SIVKELLTMVH----PSPNQWSNGFSN-----SNSGGKGCGGGGKS 149
                 GTN     S  K  L M+     P+      G        S+   K     GK 
Sbjct: 174 TKAMINGTNLDELISRAKVALAMLASVTTPNDEVLRPGLGKMPSWVSSRDRKLMESSGKD 233

Query: 150 INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
           I     + VVA DGT  +  + + V A  D +  R+VIY+KRG
Sbjct: 234 IGA---NAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRG 273

Pectinesterase may play a role in cell wall metabolism during fruit growth and development prior to ripening and may be required for preparing cell walls for softening by polygalacturonase during fruit ripening.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q96575|PME22_SOLLC Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1

 Score = 55.5 bits (132), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 31/164 (18%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFD-- 109
             D L+LLD S D +S     +  +T   +      ++ ++WLS  L NH TC+D  D  
Sbjct: 120 LTDCLELLDQSVDLVSDSIAAIDKRTHSEH------ANAQSWLSGVLTNHVTCLDELDSF 173

Query: 110 ------GTN-----SIVKELLTMVH----PSPNQWSNGFSN-----SNSGGKGCGGGGKS 149
                 GTN     S  K  L M+     P+ +    G        S+   K     GK 
Sbjct: 174 TKAMINGTNLDELISRAKVALAMLASVTTPNDDVLRPGLGKMPSWVSSRDRKLMESSGKD 233

Query: 150 INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
           I     + VVA DGT  +  + + V A  D +  R+VIY+KRG+
Sbjct: 234 IGA---NAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGI 274

Pectinesterase may play a role in cell wall metabolism during fruit growth and development prior to ripening and may be required for preparing cell walls for softening by polygalacturonase during fruit ripening.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|P14280|PME1_SOLLC Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5

 Score = 54.7 bits (130), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 31/163 (19%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFD-- 109
             D L+LLD S D  S     +  ++R  +      ++ ++WLS  L NH TC+D  D  
Sbjct: 116 LTDCLELLDQSVDFASDSIAAIDKRSRSEH------ANAQSWLSGVLTNHVTCLDELDSF 169

Query: 110 ------GTN-----SIVKELLTMVHPSPNQWSNGFSN---------SNSGGKGCGGGGKS 149
                 GTN     S  K  L M+     Q  + F           S+   K     GK 
Sbjct: 170 TKAMINGTNLEELISRAKVALAMLASLTTQDEDVFMTVLGKMPSWVSSMDRKLMESSGKD 229

Query: 150 INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
           I     + VVA DGT ++  + + V A  D +  R+VIY+KRG
Sbjct: 230 I---IANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRG 269

Pectinesterase may play a role in cell wall metabolism during fruit growth and development prior to ripening and may be required for preparing cell walls for softening by polygalacturonase during fruit ripening.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q96576|PME3_SOLLC Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1

 Score = 52.4 bits (124), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 31/164 (18%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDG- 110
             D L+LLD S D +S     +  ++R  +      ++ ++WLS  L NH TC+D     
Sbjct: 115 LTDCLELLDQSVDLVSDSIAAIDKRSRSEH------ANAQSWLSGVLTNHVTCLDELTSF 168

Query: 111 -----TNSIVKELLTMVH-----------PSPNQWSNGFSN-----SNSGGKGCGGGGKS 149
                  +++ EL+T              P+      G        S+   K     GK 
Sbjct: 169 SLSTKNGTVLDELITRAKVALAMLASVTTPNDEVLRQGLGKMPYWVSSRDRKLMESSGKD 228

Query: 150 INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
           I     + VVA DGT ++  + + V A  D N  R+VIY+K G+
Sbjct: 229 I---IANRVVAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGI 269

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q9M3B0|PME34_ARATH Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1

 Score = 52.0 bits (123), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 52/209 (24%)

Query: 29  MVGVVVNILTPFFNQTIDASLSL-FVD-----------SLDLLDFSTDELSCLYTFVFNK 76
           ++ V VN+    F+  + +S SL FVD            ++LLD S D LS   + V + 
Sbjct: 119 LIHVTVNMTLHHFSHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVVSS 178

Query: 77  TRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGT-NSIVKELLTMVHPSPNQWSNG--- 132
           + K         D+ TWLSAAL NH+TC +GFDG  +  VK+ +T    + ++  +    
Sbjct: 179 SAK-------PQDVTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLA 231

Query: 133 -FSNSNSGGKGCGGGGKS----------------------------INGVQGDVVVAADG 163
            FS S+ G    G   ++                            ++ +Q D++V+ DG
Sbjct: 232 IFSASHDGDDFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILEMPVSQIQADIIVSKDG 291

Query: 164 TWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
                 I + +      + +R +IY+K G
Sbjct: 292 NGTCKTISEAIKKAPQNSTRRIIIYVKAG 320

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q9FJ21|PME58_ARATH Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 39/172 (22%)

Query: 58  LLDFSTDELS-CLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVK 116
           L++ +TD+L  CL  F      ++    D   DLR WLS ++   +TC+D F+ TNS + 
Sbjct: 128 LMNDATDDLKKCLDNFDGFSIPQIE---DFVEDLRVWLSGSIAYQQTCMDTFEETNSKLS 184

Query: 117 ELLTMVHPSPNQW-SNGFSN----SNSGGK----GCGGG-GK------------------ 148
           + +  +  +  +  SNG +     SN  G+    G  G  GK                  
Sbjct: 185 QDMQKIFKTSRELTSNGLAMITNISNLLGEFNVTGVTGDLGKYARKLLSAEDGIPSWVGP 244

Query: 149 -------SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
                  +  GV+ +VVVA DG+  +  I + + A    N K FVIYIK+G+
Sbjct: 245 NTRRLMATKGGVKANVVVAHDGSGQYKTINEALNAVPKANQKPFVIYIKQGV 296

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
354718776	525	PME4 [Gossypium barbadense]	0.505	0.266	0.514	2e-30
6093744	522	RecName: Full=Pectinesterase/pectinester	0.545	0.289	0.447	1e-28
356532851	528	PREDICTED: pectinesterase/pectinesterase	0.574	0.301	0.445	1e-26
449495197	434	PREDICTED: pectinesterase/pectinesterase	0.606	0.387	0.441	1e-26
33520429	514	pectinesterase [Fragaria x ananassa]	0.581	0.313	0.451	1e-26
118481033	528	unknown [Populus trichocarpa]	0.631	0.331	0.431	1e-26
224069288	520	predicted protein [Populus trichocarpa]	0.631	0.336	0.431	1e-26
449456903	507	PREDICTED: pectinesterase/pectinesterase	0.606	0.331	0.441	2e-26
356556436	528	PREDICTED: pectinesterase/pectinesterase	0.574	0.301	0.453	3e-26
354718778	514	PME3 [Gossypium barbadense]	0.483	0.260	0.440	2e-25

>gi|354718776|gb|AER38245.1| PME4 [Gossypium barbadense]

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/171 (51%), Positives = 102/171 (59%), Gaps = 31/171 (18%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS 113
           D LDLLD S DELS   +   N   K N +GDLSSDLRTWLSAA++N +TCIDGF+GTNS
Sbjct: 79  DCLDLLDSSADELSWTMSASQNPNAKDNSTGDLSSDLRTWLSAAMVNQQTCIDGFEGTNS 138

Query: 114 IVK---------------ELLTMVHPSPNQWSNGFSN-SNSGGKGCGGGGKS-------- 149
           +VK                LL MVHP PN  SNG  N S  GG G G  G+S        
Sbjct: 139 MVKTVVSGSLNQITSLVRNLLIMVHPGPNSKSNGTRNGSQKGGGGGGHPGQSRFPVWFKR 198

Query: 150 -------INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
                  INGV  +VVVAADG+ NFT+IMD V    D +M R+VIYIK+GL
Sbjct: 199 EDRRLLQINGVTANVVVAADGSGNFTRIMDAVETAPDKSMNRYVIYIKKGL 249

Source: Gossypium barbadense

Species: Gossypium barbadense

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6093744|sp|Q43062.1|PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor gi|1213629|emb|CAA65237.1| pectinesterase [Prunus persica]

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/190 (44%), Positives = 106/190 (55%), Gaps = 39/190 (20%)

Query: 30  VGVVVNILTPFFNQTIDASLSLFV-DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSS 88
           V  V +IL+ F N   D  L+  + D LDLLDFS DEL+   +   N+  K N +G LSS
Sbjct: 67  VQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSLSASQNQKGKNNSTGKLSS 126

Query: 89  DLRTWLSAALINHETCIDGFDGTNSI---------------VKELLTMVHPSPNQWSNGF 133
           DLRTWLSAAL+N +TC +GF+GTNSI               V+ELLT VHP+ NQ     
Sbjct: 127 DLRTWLSAALVNQDTCSNGFEGTNSIVQGLISAGLGQVTSLVQELLTQVHPNSNQ----- 181

Query: 134 SNSNSGGKGCGGGGKS-----------INGVQGDVVVAADGTWNFTKIMDTVLATKDYNM 182
                  +G  G   S            +GV  D +VA DGT NFT + D VLA  DY+M
Sbjct: 182 -------QGPNGQIPSWVKTKDRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSM 234

Query: 183 KRFVIYIKRG 192
           +R+VIYIKRG
Sbjct: 235 RRYVIYIKRG 244

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532851|ref|XP_003534983.1| PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Glycine max]

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/182 (44%), Positives = 109/182 (59%), Gaps = 23/182 (12%)

Query: 33  VVNILTPFFNQTIDASLSLFV-DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR 91
           + +IL+ F +   D+ LS  V D L+LLD S+DEL    +   +   K N +G+ SSDLR
Sbjct: 67  ITSILSEFGSGFGDSRLSNAVSDCLELLDMSSDELDWSVSATQSPKGKHNSTGNTSSDLR 126

Query: 92  TWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPSPNQWSNGFSNS 136
           TWLSAAL N +TC+DGFDGTN IVK               +LLT V+P  + ++  FS+ 
Sbjct: 127 TWLSAALANQDTCMDGFDGTNGIVKGLVSTGLGQVMSLLQQLLTQVNPVSDHYT--FSSP 184

Query: 137 NSGGKGCGGGG-----KSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKR 191
                     G     ++ NGV  D VVAADGT NFTK+MD VLA  +Y+M+R+VI+IKR
Sbjct: 185 QGHFPPWVKPGERKLLQAANGVSFDAVVAADGTGNFTKVMDAVLAAPNYSMQRYVIHIKR 244

Query: 192 GL 193
           G+
Sbjct: 245 GV 246

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449495197|ref|XP_004159762.1| PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Cucumis sativus]

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/188 (44%), Positives = 109/188 (57%), Gaps = 20/188 (10%)

Query: 22  SLLWRSVMVGVVVNILTPFFNQTIDASLSLFV-DSLDLLDFSTDELSCLYTFVFNKTRKL 80
           SLL    +V  V+ I +PF     D  LS  + D LDLLD S D+LS   +   N   K 
Sbjct: 47  SLLSTIDVVRQVMAIFSPFSKLLGDFRLSTAISDCLDLLDSSADQLSWSLSATQNPKAKN 106

Query: 81  NGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPS 125
           + +GDLSSDL+TWLSAA++N ETC+DGF+GTNSI+K               +LL+MV   
Sbjct: 107 HSTGDLSSDLKTWLSAAVVNPETCMDGFEGTNSIIKGLVSGGVNQLTSQLYDLLSMVKSI 166

Query: 126 PNQWSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRF 185
           PNQ S   S   S  +        IN +  D  VAADGT +FT +MD VLA  D +++R+
Sbjct: 167 PNQPSEFPSWLKSEDQNL----LQINDLAADATVAADGTGDFTNVMDAVLAAPDNSIRRY 222

Query: 186 VIYIKRGL 193
           VIYIK+G+
Sbjct: 223 VIYIKKGV 230

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|33520429|gb|AAQ21124.1| pectinesterase [Fragaria x ananassa]

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 103/177 (58%), Gaps = 16/177 (9%)

Query: 33  VVNILTPFFNQTIDASLSLFVDS-LDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR 91
           VV+IL+       D  LS  VD  L+L+D STD+LS   +   NK  K N +G+LSSDLR
Sbjct: 60  VVSILSDVAKGFGDFRLSNAVDDCLELMDDSTDQLSWTLSATQNKNGKHNSTGNLSSDLR 119

Query: 92  TWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPSPNQWSNGFSNS 136
           TWLSA L+N +TC +G DGTNSIVK               ELL  VHP+ +Q  +    +
Sbjct: 120 TWLSATLVNQDTCNEGLDGTNSIVKSLVSGSLNQITSLVLELLGQVHPTSDQHESSNGQT 179

Query: 137 NSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
            +  K         NGV  DVVVA DGT NFT I   +L+  DY++KR+VIY+K+GL
Sbjct: 180 PAWFKAEDRKLLQANGVPVDVVVAQDGTGNFTNITAAILSAPDYSLKRYVIYVKKGL 236

Source: Fragaria x ananassa

Species: Fragaria x ananassa

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481033|gb|ABK92470.1| unknown [Populus trichocarpa]

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 114/204 (55%), Gaps = 29/204 (14%)

Query: 16  FMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLS-LFVDSLDLLDFSTDELSCLYTFVF 74
           F+ SL S L    ++  V++I++ F N   D  L+    D LDLLDFS DELS   +   
Sbjct: 52  FVGSLTSTL---DIIRDVISIISNFGNVFGDIRLTNAITDCLDLLDFSADELSWSMSASQ 108

Query: 75  NKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSI---------------VKELL 119
           N   K N +GDLSSDLRTWLSAAL+N +TCI+GFDGTN+I               V+ELL
Sbjct: 109 NPNGKHNSTGDLSSDLRTWLSAALVNQDTCIEGFDGTNNILKGLVSGSLNQITSSVQELL 168

Query: 120 TMVHPSPN-------QWSNGFSNSNSGGKGCGGGGKS---INGVQGDVVVAADGTWNFTK 169
             V P  N          +   N++          +    +NGV  +V+VAADGT NFTK
Sbjct: 169 KNVDPHTNSKSSGGGFSGSKSGNNDRFPSWVKHEDRKLLVLNGVTPNVIVAADGTGNFTK 228

Query: 170 IMDTVLATKDYNMKRFVIYIKRGL 193
           IMD V A  DY+M R +IYIK+G+
Sbjct: 229 IMDAVAAAPDYSMHRHIIYIKKGV 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069288|ref|XP_002326321.1| predicted protein [Populus trichocarpa] gi|222833514|gb|EEE71991.1| predicted protein [Populus trichocarpa]

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 114/204 (55%), Gaps = 29/204 (14%)

Query: 16  FMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLS-LFVDSLDLLDFSTDELSCLYTFVF 74
           F+ SL S L    ++  V++I++ F N   D  L+    D LDLLDFS DELS   +   
Sbjct: 44  FVGSLTSTL---DIIRDVISIISNFGNVFGDIRLTNAITDCLDLLDFSADELSWSMSASQ 100

Query: 75  NKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSI---------------VKELL 119
           N   K N +GDLSSDLRTWLSAAL+N +TCI+GFDGTN+I               V+ELL
Sbjct: 101 NPNGKHNSTGDLSSDLRTWLSAALVNQDTCIEGFDGTNNILKGLVSGSLNQITSSVQELL 160

Query: 120 TMVHPSPN-------QWSNGFSNSNSGGKGCGGGGKS---INGVQGDVVVAADGTWNFTK 169
             V P  N          +   N++          +    +NGV  +V+VAADGT NFTK
Sbjct: 161 KNVDPHTNSKSSGGGFSGSKSGNNDRFPSWVKHEDRKLLVLNGVTPNVIVAADGTGNFTK 220

Query: 170 IMDTVLATKDYNMKRFVIYIKRGL 193
           IMD V A  DY+M R +IYIK+G+
Sbjct: 221 IMDAVAAAPDYSMHRHIIYIKKGV 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456903|ref|XP_004146188.1| PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Cucumis sativus]

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/188 (44%), Positives = 109/188 (57%), Gaps = 20/188 (10%)

Query: 22  SLLWRSVMVGVVVNILTPFFNQTIDASLSLFV-DSLDLLDFSTDELSCLYTFVFNKTRKL 80
           SLL    +V  V+ I +PF     D  LS  + D LDLLD S D+LS   +   N   K 
Sbjct: 47  SLLSTIDVVRQVMAIFSPFSKLLGDFRLSTAISDCLDLLDSSADQLSWSLSATQNPKAKN 106

Query: 81  NGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPS 125
           + +GDLSSDL+TWLSAA++N ETC+DGF+GTNSI+K               +LL+MV   
Sbjct: 107 HSTGDLSSDLKTWLSAAVVNPETCMDGFEGTNSIIKGLVSGGVNQLTSQLYDLLSMVKSI 166

Query: 126 PNQWSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRF 185
           PNQ S   S   S  +        IN +  D  VAADGT +FT +MD VLA  D +++R+
Sbjct: 167 PNQPSEFPSWLKSEDQNL----LQINDLAADATVAADGTGDFTNVMDAVLAAPDNSIRRY 222

Query: 186 VIYIKRGL 193
           VIYIK+G+
Sbjct: 223 VIYIKKGV 230

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556436|ref|XP_003546532.1| PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Glycine max]

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/181 (45%), Positives = 106/181 (58%), Gaps = 22/181 (12%)

Query: 33  VVNILTPFFNQTIDASLSLFV-DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR 91
           V +IL+ F +   D+ LS  V D LDLLD S+DEL    +   +   K N +G+ SSDLR
Sbjct: 70  VTSILSEFGSGFGDSRLSNAVSDCLDLLDMSSDELDWSVSATQSPKGKHNSTGNTSSDLR 129

Query: 92  TWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPSPNQWSNGFSNS 136
           TWLSAAL N +TCIDGFDGTN +VK               +LLT V P  + +S  FS+ 
Sbjct: 130 TWLSAALANQDTCIDGFDGTNGMVKGLVSTGIGQVMSLLQQLLTQVKPVSDHFS--FSSP 187

Query: 137 NSGGKGCGGGGK----SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
                     G+      N V  D VVAADGT N+TK+MD VLA  +Y+M+R+VI+IKRG
Sbjct: 188 QGQYPSWVKTGERKLLQANVVSFDAVVAADGTGNYTKVMDAVLAAPNYSMQRYVIHIKRG 247

Query: 193 L 193
           +
Sbjct: 248 V 248

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|354718778|gb|AER38246.1| PME3 [Gossypium barbadense]

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 90/168 (53%), Gaps = 34/168 (20%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS 113
           D LDLLDFS D+LS   +   N   K N +GD++SDLRTWLSAA+ N ETCI+GF+GTN 
Sbjct: 77  DCLDLLDFSADQLSWSLSASQNPNGKHNSTGDVASDLRTWLSAAMANQETCIEGFEGTNG 136

Query: 114 IVK---------------ELLTMVHPSPNQWSNGFSNSNSGGKGCGGGGK---------- 148
           I K               +LLTMV P       G  + ++G +      +          
Sbjct: 137 IAKTVVAGGLNQVTSLVSDLLTMVQPP------GSDSRSNGDRKVAEKNRFPSWFEREDQ 190

Query: 149 ---SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
                NGV  D VVA DGT  FT IMD V A  DY+M R VIYIK+GL
Sbjct: 191 KLLQANGVTADAVVALDGTGTFTNIMDAVAAAPDYSMNRHVIYIKKGL 238

Source: Gossypium barbadense

Species: Gossypium barbadense

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
TAIR|locus:2084751	527	AT3G43270 [Arabidopsis thalian	0.148	0.077	0.609	8.8e-15
TAIR|locus:2125949	525	PME44 "pectin methylesterase 4	0.162	0.085	0.6	1.8e-14
TAIR|locus:2154277	587	PMEPCRF "pectin methylesterase	0.097	0.045	0.678	0.00055
TAIR|locus:2078047	543	AT3G05620 [Arabidopsis thalian	0.140	0.071	0.452	0.00094

TAIR|locus:2084751 AT3G43270 [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
 Identities = 25/41 (60%), Positives = 35/41 (85%)

Query:    79 KLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELL 119
             K N +GD+ SDLRTW+SAAL N +TC+DGF+GTN I+K+++
Sbjct:   108 KDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIV 148

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005618 "cell wall" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=ISS;IDA

GO:0030599 "pectinesterase activity" evidence=IEA;ISS

GO:0042545 "cell wall modification" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2125949 PME44 "pectin methylesterase 44" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 27/45 (60%), Positives = 34/45 (75%)

Query:    75 NKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVKELL 119
             N   K NG+GD+ SD RTWLSAAL N  TC++GFDGT+ +VK L+
Sbjct:    92 NPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGFDGTSGLVKSLV 136

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005618 "cell wall" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=ISS

GO:0030599 "pectinesterase activity" evidence=IEA;ISS

GO:0042545 "cell wall modification" evidence=IEA

TAIR|locus:2154277 PMEPCRF "pectin methylesterase PCR fragment F" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
 Identities = 19/28 (67%), Positives = 23/28 (82%)

Query:    83 SGDLS-SDLRTWLSAALINHETCIDGFD 109
             SGD S SD+ TWLS+A+ NH+TC DGFD
Sbjct:   166 SGDESHSDVMTWLSSAMTNHDTCTDGFD 193

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0030599 "pectinesterase activity" evidence=IEA;ISS

GO:0042545 "cell wall modification" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2078047 AT3G05620 [Arabidopsis thaliana (taxid:3702)]

 Score = 100 (40.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
 Identities = 19/42 (45%), Positives = 31/42 (73%)

Query:    81 NGSGDLSS---DLRTWLSAALINHETCIDGFDGTNSIVKELL 119
             +GS D ++   +L+TWLSAA+ N +TC++GF+GT    +EL+
Sbjct:   139 DGSHDAAAAGGNLKTWLSAAMSNQDTCLEGFEGTERKYEELI 180

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005618 "cell wall" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=ISS

GO:0030599 "pectinesterase activity" evidence=IEA;ISS

GO:0042545 "cell wall modification" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	277
PLN02201	520	PLN02201, PLN02201, probable pectinesterase/pectin	8e-45
PLN02506	537	PLN02506, PLN02506, putative pectinesterase/pectin	4e-12
PLN02484	587	PLN02484, PLN02484, probable pectinesterase/pectin	5e-12
PLN02301	548	PLN02301, PLN02301, pectinesterase/pectinesterase	1e-11
smart00856	148	smart00856, PMEI, Plant invertase/pectin methylest	3e-09
pfam01095	298	pfam01095, Pectinesterase, Pectinesterase	8e-09
PLN02933	530	PLN02933, PLN02933, Probable pectinesterase/pectin	1e-08
PLN02990	572	PLN02990, PLN02990, Probable pectinesterase/pectin	2e-08
pfam04043	145	pfam04043, PMEI, Plant invertase/pectin methyleste	6e-08
PLN02745	596	PLN02745, PLN02745, Putative pectinesterase/pectin	1e-07
PLN02314	586	PLN02314, PLN02314, pectinesterase	3e-07
PLN02313	587	PLN02313, PLN02313, Pectinesterase/pectinesterase	4e-07
PLN02217	670	PLN02217, PLN02217, probable pectinesterase/pectin	5e-06
PLN02170	529	PLN02170, PLN02170, probable pectinesterase/pectin	7e-06
PLN02416	541	PLN02416, PLN02416, probable pectinesterase/pectin	8e-06
PLN02916	502	PLN02916, PLN02916, pectinesterase family protein	1e-05
PLN02488	509	PLN02488, PLN02488, probable pectinesterase/pectin	7e-05
TIGR01614	178	TIGR01614, PME_inhib, pectinesterase inhibitor dom	2e-04
PLN02995	539	PLN02995, PLN02995, Probable pectinesterase/pectin	4e-04
PLN02468	565	PLN02468, PLN02468, putative pectinesterase/pectin	0.002
PLN02468	565	PLN02468, PLN02468, putative pectinesterase/pectin	0.003

>gnl|CDD|177852 PLN02201, PLN02201, probable pectinesterase/pectinesterase inhibitor

 Score =  158 bits (400), Expect = 8e-45
 Identities = 94/214 (43%), Positives = 116/214 (54%), Gaps = 42/214 (19%)

Query: 14  SVFMKSLPSLLWRSVMVGVVVNILTPFFNQTIDASLS-LFVDSLDLLDFSTDELSCLYTF 72
           S F+ SL + +    ++  VV+I++ F     D+ LS    D LDLLDF+ +ELS   + 
Sbjct: 39  SEFVSSLKTTV---DVIRKVVSIVSQFDKVFGDSRLSNAISDCLDLLDFAAEELSWSISA 95

Query: 73  VFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNSIVK---------------E 117
             N   K N +GD+ SDLRTWLSAAL N +TCI+GFDGTN IVK               E
Sbjct: 96  SQNPNGKDNSTGDVGSDLRTWLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRE 155

Query: 118 LLTMVHPSPNQWSNGFSNSNSGGKGCGGGGKS------------------INGVQGDVVV 159
           LLTMVHP P++       S   G G      S                   NGV  DVVV
Sbjct: 156 LLTMVHPPPSK-----GKSKPIGGGTMTKKHSGSSKFPSWVKPEDRKLLQTNGVTPDVVV 210

Query: 160 AADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
           AADGT NFT IMD VLA  DY+ KR+VIYIK+G+
Sbjct: 211 AADGTGNFTTIMDAVLAAPDYSTKRYVIYIKKGV 244

Length = 520

>gnl|CDD|215280 PLN02506, PLN02506, putative pectinesterase/pectinesterase inhibitor

 Score = 65.7 bits (160), Expect = 4e-12
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 27/166 (16%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTN- 112
           D  +LLDFS  EL+       NK R  + +     +L+ WLSAAL N +TC++GF+GT+ 
Sbjct: 106 DCKELLDFSVSELA-WSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDR 164

Query: 113 -----------------SIVKELLTMVHP---SPNQWSNGFSNSNSGGKGCGGGGKSI-- 150
                            S V  + T +H     P++     + S+   +    G + +  
Sbjct: 165 HLENFIKGSLKQVTQLISNVLAMYTQLHSLPFKPSRNETETAPSSKFPEWMTEGDQELLK 224

Query: 151 ---NGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
               G+  D +VA DG+ ++  I + +    +++ +R++IY+K+G+
Sbjct: 225 HDPLGMHVDTIVALDGSGHYRTITEAINEAPNHSNRRYIIYVKKGV 270

Length = 537

>gnl|CDD|178102 PLN02484, PLN02484, probable pectinesterase/pectinesterase inhibitor

 Score = 65.3 bits (159), Expect = 5e-12
 Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 53/183 (28%)

Query: 50  SLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLS-SDLRTWLSAALINHETCIDGF 108
           S +   L+LLD S D LS   + V      +  SG  S  D+ TWLSAAL NH+TC +GF
Sbjct: 140 SAYDSCLELLDDSVDALSRALSSV------VPSSGGGSPQDVVTWLSAALTNHDTCTEGF 193

Query: 109 DGTNS---------IVKELLTMVHPSPNQWSNGFSNSNSGGKGCGGG------------- 146
           DG N           +K+L  +V       SN  +  ++   G   G             
Sbjct: 194 DGVNGGEVKDQMTGALKDLSELV-------SNCLAIFSASNGGDFSGVPIQNRRRLLTEE 246

Query: 147 -----------------GKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYI 189
                            G  ++ +Q D++V+ DG   F  I + +    +++ +R +IY+
Sbjct: 247 EDISFPRWLGRRERELLGMPVSAIQADIIVSKDGNGTFKTISEAIKKAPEHSSRRTIIYV 306

Query: 190 KRG 192
           K G
Sbjct: 307 KAG 309

Length = 587

>gnl|CDD|215170 PLN02301, PLN02301, pectinesterase/pectinesterase inhibitor

 Score = 64.1 bits (156), Expect = 1e-11
 Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 32/163 (19%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKL-NGSGDLSSDLRTWLSAALINHETCIDGFDG 110
             D ++L+D S D        + +    L N +    +D  TWLS+ L NH TC+DG +G
Sbjct: 121 LADCVELMDLSKDR-------IKDSVEALGNVTSKSHADAHTWLSSVLTNHVTCLDGING 173

Query: 111 TNSIVKE-------------LLTMVHPSPNQWSNGFSNSNS--------GGKGCGGGGKS 149
            +    +             L  +V  SP +       S            K      K+
Sbjct: 174 PSRQSMKPGLKDLISRARTSLAILVSVSPAKEDLLMPLSGDFPSWLTSKDRKLLESSPKN 233

Query: 150 INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
           I     +VVVA DG+  +  + + V +  D +  R+VIY+K+G
Sbjct: 234 IKA---NVVVAKDGSGKYKTVKEAVASAPDNSKTRYVIYVKKG 273

Length = 548

>gnl|CDD|214860 smart00856, PMEI, Plant invertase/pectin methylesterase inhibitor

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 9/69 (13%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGT 111
             D L+L D + D L         K  +   SGD   D+ TWLSAAL + +TC+DGF+  
Sbjct: 73  LKDCLELYDDAVDSL--------EKALEELKSGDYD-DVATWLSAALTDQDTCLDGFEEN 123

Query: 112 NSIVKELLT 120
           +  VK  LT
Sbjct: 124 DDKVKSPLT 132

This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical. Length = 148

>gnl|CDD|216297 pfam01095, Pectinesterase, Pectinesterase

 Score = 54.9 bits (133), Expect = 8e-09
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 156 DVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
           DVVVA DG+  F  I + V A    + KRFVIY+K G+
Sbjct: 1   DVVVAKDGSGQFKTINEAVAAAPKKSSKRFVIYVKAGV 38

Length = 298

>gnl|CDD|178521 PLN02933, PLN02933, Probable pectinesterase/pectinesterase inhibitor

 Score = 55.0 bits (132), Expect = 1e-08
 Identities = 54/188 (28%), Positives = 73/188 (38%), Gaps = 37/188 (19%)

Query: 35  NILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWL 94
           ++ T             F D L LLD   D +S L T +     KL  S    +D+   L
Sbjct: 75  DLQTRLGPNLTHRERCAFEDCLGLLD---DTISDLTTAI----SKLRSSSPEFNDVSMLL 127

Query: 95  SAALINHETCIDGF-----DGTNSIVKELLTMVHPSPNQWSNGFSNSNSGGKGCGGGGKS 149
           S A+ N +TC+DGF     +  N +  EL   +  S    SN  SNS +  +   G    
Sbjct: 128 SNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISGKIPG 187

Query: 150 INGVQGDV-------------------------VVAADGTWNFTKIMDTVLATKDYNMKR 184
               + DV                          VA DGT NFT I + V A  + +  R
Sbjct: 188 PKSSEVDVEYPSWVSGNDRRLLEAPVQETNVNLSVAIDGTGNFTTINEAVSAAPNSSETR 247

Query: 185 FVIYIKRG 192
           F+IYIK G
Sbjct: 248 FIIYIKGG 255

Length = 530

>gnl|CDD|215535 PLN02990, PLN02990, Probable pectinesterase/pectinesterase inhibitor

 Score = 54.3 bits (130), Expect = 2e-08
 Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 37/145 (25%)

Query: 85  DLSSDLRTWLSAALINHETCIDGFDGTNS-IVKELLTMVHPSPNQWSNGFS--------- 134
           D   DLR WLS ++   +TC+D F+   S + +++L +   S    SNG +         
Sbjct: 154 DFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITNISNLL 213

Query: 135 -NSNSGGKGCGGGGK-------------------------SINGVQGDVVVAADGTWNFT 168
              N  G   G  GK                         +  GV+ +VVVA DG+  + 
Sbjct: 214 GEFNITGL-TGDLGKYARKLLSTEDGIPSWVGPNTRRLMATKGGVKANVVVAQDGSGQYK 272

Query: 169 KIMDTVLATKDYNMKRFVIYIKRGL 193
            I + + A    N K FVIYIK+G+
Sbjct: 273 TINEALNAVPKANQKPFVIYIKQGV 297

Length = 572

>gnl|CDD|217858 pfam04043, PMEI, Plant invertase/pectin methylesterase inhibitor

 Score = 50.6 bits (121), Expect = 6e-08
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 9/71 (12%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGT 111
             D ++L D + D+L      +         SGD   D RTWLSAAL N +TC DGF+  
Sbjct: 70  LDDCVELYDDAVDDLQDALEALK--------SGDYD-DARTWLSAALTNQDTCEDGFEEK 120

Query: 112 NSIVKELLTMV 122
            S +K  L   
Sbjct: 121 GSGIKSPLAKR 131

This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences (personal obs:C Yeats), suggesting that both PMEs and their inhibitor are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical. Length = 145

>gnl|CDD|178346 PLN02745, PLN02745, Putative pectinesterase/pectinesterase inhibitor

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 40/179 (22%)

Query: 52  FVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFD-- 109
             D   L++ + +EL    + + ++  KL        DL  WLSA +   ETCIDGF   
Sbjct: 148 IEDCKLLVEDAKEELKASISRINDEVNKLA---KNVPDLNNWLSAVMSYQETCIDGFPEG 204

Query: 110 ----------------GTNS--IVKELLTMVHPSP----------NQWSNGFSNSNSGGK 141
                            +NS  +V  L + +               + SN  S    G  
Sbjct: 205 KLKSEMEKTFKSSQELTSNSLAMVSSLTSFLSSFSVPKVLNRHLLAKESNSPSLEKDGIP 264

Query: 142 GCGGG-------GKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
                          ++ ++ +  VA DG+ NFT I D + A       R+VIY+K+G+
Sbjct: 265 SWMSNEDRRMLKAVDVDALKPNATVAKDGSGNFTTISDALAAMPAKYEGRYVIYVKQGI 323

Length = 596

>gnl|CDD|215179 PLN02314, PLN02314, pectinesterase

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 36/141 (25%)

Query: 89  DLRTWLSAALINHETCIDGFDGTN----------------------------SIVKELLT 120
           DL+TWLSA + + ETCID     +                            +IV ++L 
Sbjct: 176 DLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNSLAIVSKILG 235

Query: 121 MVHP---SPNQWSNGFSNSNSGG--KGCGGGGKSI---NGVQGDVVVAADGTWNFTKIMD 172
           ++       ++    F +  S G       G + +        +V VA DG+ +   I +
Sbjct: 236 ILSDLGIPIHRRLLSFHHDLSSGFPSWVNIGDRRLLQEEKPTPNVTVAKDGSGDVKTINE 295

Query: 173 TVLATKDYNMKRFVIYIKRGL 193
            V +    +  RFVIY+K G 
Sbjct: 296 AVASIPKKSKSRFVIYVKEGT 316

Length = 586

>gnl|CDD|177947 PLN02313, PLN02313, Pectinesterase/pectinesterase inhibitor

 Score = 50.5 bits (120), Expect = 4e-07
 Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 52/187 (27%)

Query: 54  DSLDLLDFSTDELSC----LYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGF- 108
           D L+ +D + DEL      L+ +   K+ + +     + DL+T +S+A+ N  TC+DGF 
Sbjct: 132 DCLETIDETLDELHVAVEDLHQYPKQKSLRKH-----ADDLKTLISSAITNQGTCLDGFS 186

Query: 109 --DGTNSIVKELLT----MVHPSPNQW-------------------SNGFSNSN------ 137
             D    + K LL     + H   N                     S+ F+N+N      
Sbjct: 187 YDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSSFTNNNNRKLKE 246

Query: 138 ------SGG--KGCGGGGKSI---NGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFV 186
                 S G       G + +   + ++ D  VAADG+ +FT +   V A  + + KRFV
Sbjct: 247 VTGDLDSEGWPTWLSVGDRRLLQGSTIKADATVAADGSGDFTTVAAAVAAAPEKSNKRFV 306

Query: 187 IYIKRGL 193
           I+IK G+
Sbjct: 307 IHIKAGV 313

Length = 587

>gnl|CDD|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor

 Score = 47.0 bits (111), Expect = 5e-06
 Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 38/169 (22%)

Query: 57  DLLDFSTDELSC----LYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTN 112
           +L+D++  ELS     L  F F+K        +    LR WLSA + + +TC+DGF GT 
Sbjct: 126 ELMDYAIGELSKSFEELGKFEFHKV------DEALIKLRIWLSATISHEQTCLDGFQGTQ 179

Query: 113 -----SIVKELLTMVHPSPNQWSNGFSNSNSGGKGC-------------------GGGGK 148
                +I K L T V  + N  +     SN  G+                         +
Sbjct: 180 GNAGETIKKALKTAVQLTHNGLAMVSEMSNYLGQMQIPEMNSRRLLSQEFPSWMDQRARR 239

Query: 149 SING----VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
            +N     V+ D+VVA DG+  +  I + +          FV++IK G+
Sbjct: 240 LLNAPMSEVKPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKAGI 288

Length = 670

>gnl|CDD|215114 PLN02170, PLN02170, probable pectinesterase/pectinesterase inhibitor

 Score = 46.5 bits (110), Expect = 7e-06
 Identities = 47/168 (27%), Positives = 64/168 (38%), Gaps = 37/168 (22%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS 113
           D L+LLD   D L  L   V  K            D+ TWLSAAL N ETC       +S
Sbjct: 104 DCLELLD---DTLDMLSRIVVIKHAD-----HDEEDVHTWLSAALTNQETCEQSLQEKSS 155

Query: 114 IVKELLTMVHPSPN---QWSNGF----------SNSNSGGKGCGGGGK------------ 148
             K  L M   + N     +N            S+S+ GG+                   
Sbjct: 156 SYKHGLAMDFVARNLTGLLTNSLDLFVSVKSKHSSSSKGGRKLLSEQDFPTWVSSSERKL 215

Query: 149 ---SINGVQGDVVVAADGTWNFTKIMDTVLATK-DYNMKRFVIYIKRG 192
               +  ++   VVAADG+     I + +L+T  +    R VIY+K G
Sbjct: 216 LEAPVEELKVHAVVAADGSGTHKTIGEALLSTSLESGGGRTVIYLKAG 263

Length = 529

>gnl|CDD|178037 PLN02416, PLN02416, probable pectinesterase/pectinesterase inhibitor

 Score = 46.5 bits (110), Expect = 8e-06
 Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 26/131 (19%)

Query: 88  SDLRTWLSAALINHETCIDGFDGT---------NSI------VKELLTMVHPSPNQWSNG 132
           +D R +LSAAL N  TC++G D           NS       V   L+M+  S    + G
Sbjct: 139 ADARAYLSAALTNKNTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSMLPKSRRS-TKG 197

Query: 133 FSNSNSGGKGCGGGGKSINGVQGD----------VVVAADGTWNFTKIMDTVLATKDYNM 182
             N    G       K    +Q D          +VVAADGT NF+ I D +    + + 
Sbjct: 198 TKNRRLLGFPKWVSKKDRRILQSDGYDEYDPSEVLVVAADGTGNFSTITDAINFAPNNSN 257

Query: 183 KRFVIYIKRGL 193
            R +IY++ G+
Sbjct: 258 DRIIIYVREGV 268

Length = 541

>gnl|CDD|178504 PLN02916, PLN02916, pectinesterase family protein

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 31/136 (22%)

Query: 89  DLRTWLSAALINHETCIDGFDGT----NSIVKELLTMVHPSPNQWSNG------------ 132
           D RTWLS  L NH TC+DG +        +   +  ++  +   +               
Sbjct: 93  DARTWLSGVLANHHTCLDGLEQKGQGHKPMAHNVTFVLSEALALYKKSRGHMKKGLPRRP 152

Query: 133 --FSNSNSGGKGCGGGGKSINGV----------QGDVVVAADGTWNFTKIMDTVLATKDY 180
               N   G +       + NG           + D VVA DG+     I   + A    
Sbjct: 153 KHRPNHGPGREVHPPSRPNQNGGMLVSWNPTTSRADFVVARDGSGTHRTINQALAALSRM 212

Query: 181 NMK---RFVIYIKRGL 193
                 R +IY+K G+
Sbjct: 213 GKSRTNRVIIYVKAGV 228

Length = 502

>gnl|CDD|178106 PLN02488, PLN02488, probable pectinesterase/pectinesterase inhibitor

 Score = 43.4 bits (102), Expect = 7e-05
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 21/126 (16%)

Query: 89  DLRTWLSAALINHETCIDGF--------------DGTNSIVKELLTMVHPSPNQ------ 128
           ++ TWLS  L ++ TCID                D  +     L   +  SP        
Sbjct: 110 NVHTWLSGVLTSYITCIDEIGEGAYKRRVEPELEDLISRARVALAIFISISPRDDTELKS 169

Query: 129 -WSNGFSNSNSGGKGCGGGGKSINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVI 187
              NG S  ++  K        +     DVVVA DG+  +  +   + A  +++ KRFVI
Sbjct: 170 VVPNGPSWLSNVDKKYLYLNPEVLKKIADVVVAKDGSGKYNTVNAAIAAAPEHSRKRFVI 229

Query: 188 YIKRGL 193
           YIK G+
Sbjct: 230 YIKTGV 235

Length = 509

>gnl|CDD|233492 TIGR01614, PME_inhib, pectinesterase inhibitor domain

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 16/96 (16%)

Query: 40  FFNQTIDASLSLFVDSLD----LLDFSTDEL------SC--LYTFV---FNKTRKLNGSG 84
             N ++ A+LS   D+LD    LL    D         C  LY+      +K      S 
Sbjct: 63  LANISVSAALSNASDTLDHISKLLLTKGDPRDKSALEDCVELYSDAVDALDKALASLKSK 122

Query: 85  DLSSDLRTWLSAALINHETCIDGFDGTNSIVKELLT 120
           D S D  TWLS+AL +  TC DGF+    IVK  LT
Sbjct: 123 DYS-DAETWLSSALTDPSTCEDGFEELGGIVKSPLT 157

This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by This model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family. Length = 178

>gnl|CDD|178574 PLN02995, PLN02995, Probable pectinesterase/pectinesterase inhibitor

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 26/128 (20%)

Query: 89  DLRTWLSAALINHETCIDGFDGTNSIVKELLTMVHPSPNQWSNGFSNS--------NSGG 140
           D +TWLS AL N ETC  G    N  V + +T +  S  + S+  SN          +G 
Sbjct: 139 DAQTWLSTALTNTETCRRGSSDLN--VSDFITPI-VSNTKISHLISNCLAVNGALLTAGN 195

Query: 141 KGCGGGGKS-------------INGVQGDVVVAADGTWNFTKIMDT--VLATKDYNMKRF 185
            G     +              +  V+ ++VVA DG+ +F  +     V   +     RF
Sbjct: 196 NGNTTANQKGFPTWVSRKDRRLLRLVRANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRF 255

Query: 186 VIYIKRGL 193
           VIY+KRG+
Sbjct: 256 VIYVKRGI 263

Length = 539

>gnl|CDD|178087 PLN02468, PLN02468, putative pectinesterase/pectinesterase inhibitor

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 13/38 (34%), Positives = 24/38 (63%)

Query: 156 DVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL 193
           D+VVA DG+  +  I + +    + + KR +IY+K+G+
Sbjct: 259 DIVVAKDGSGKYKTISEALKDVPEKSEKRTIIYVKKGV 296

Length = 565

>gnl|CDD|178087 PLN02468, PLN02468, putative pectinesterase/pectinesterase inhibitor

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 15/64 (23%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLS-----SDLRTWLSAALINHETCIDGF 108
              +LLD + D L        N +  L  SG +S      DLRTWLS+A    ETCIDG 
Sbjct: 137 ACQELLDLAIDNL--------NNS--LTSSGGVSVLDNVDDLRTWLSSAGTYQETCIDGL 186

Query: 109 DGTN 112
              N
Sbjct: 187 AEPN 190

Length = 565

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	277
PLN02217	670	probable pectinesterase/pectinesterase inhibitor	100.0
PLN02990	572	Probable pectinesterase/pectinesterase inhibitor	100.0
PLN02314	586	pectinesterase	100.0
PLN02197	588	pectinesterase	100.0
PLN02313	587	Pectinesterase/pectinesterase inhibitor	100.0
PLN02201	520	probable pectinesterase/pectinesterase inhibitor	100.0
PLN02468	565	putative pectinesterase/pectinesterase inhibitor	100.0
PLN02484	587	probable pectinesterase/pectinesterase inhibitor	100.0
PLN02933	530	Probable pectinesterase/pectinesterase inhibitor	100.0
PLN02506	537	putative pectinesterase/pectinesterase inhibitor	100.0
PLN03043	538	Probable pectinesterase/pectinesterase inhibitor;	100.0
PLN02301	548	pectinesterase/pectinesterase inhibitor	100.0
PLN02713	566	Probable pectinesterase/pectinesterase inhibitor	100.0
PLN02745	596	Putative pectinesterase/pectinesterase inhibitor	100.0
PLN02416	541	probable pectinesterase/pectinesterase inhibitor	100.0
PLN02708	553	Probable pectinesterase/pectinesterase inhibitor	100.0
PLN02995	539	Probable pectinesterase/pectinesterase inhibitor	100.0
PLN02488	509	probable pectinesterase/pectinesterase inhibitor	100.0
PLN02170	529	probable pectinesterase/pectinesterase inhibitor	100.0
PLN02916	502	pectinesterase family protein	100.0
PLN02698	497	Probable pectinesterase/pectinesterase inhibitor	100.0
PLN02176	340	putative pectinesterase	99.69
PLN02671	359	pectinesterase	99.67
PLN02304	379	probable pectinesterase	99.66
PLN02634	359	probable pectinesterase	99.66
PLN02497	331	probable pectinesterase	99.64
PLN02665	366	pectinesterase family protein	99.64
PLN02773	317	pectinesterase	99.64
PLN02432	293	putative pectinesterase	99.63
PLN02682	369	pectinesterase family protein	99.63
PF01095	298	Pectinesterase: Pectinesterase; InterPro: IPR00007	99.61
PLN02480	343	Probable pectinesterase	99.61
smart00856	148	PMEI Plant invertase/pectin methylesterase inhibit	99.52
PRK10531	422	acyl-CoA thioesterase; Provisional	99.5
PF04043	152	PMEI: Plant invertase/pectin methylesterase inhibi	99.35
TIGR01614	178	PME_inhib pectinesterase inhibitor domain. This mo	99.33
COG4677	405	PemB Pectin methylesterase [Carbohydrate transport	98.61
TIGR03805	314	beta_helix_1 parallel beta-helix repeat-containing	94.72
PF07602	246	DUF1565: Protein of unknown function (DUF1565); In	88.46
PF12708	225	Pectate_lyase_3: Pectate lyase superfamily protein	82.02

>PLN02217 probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=5.3e-43  Score=355.13  Aligned_cols=203  Identities=21%  Similarity=0.242  Sum_probs=164.0

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc-----cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT-----IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l-----~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      ..+|++++++++.+++.++.+...  ..+     ..+++.|++||+|||++++|+|++++++|.....  .......+|+
T Consensus        80 ~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~~~~~r~k~AL~DClELlddAvDeL~~Sl~~L~~~~~--~~~~~~~dDv  157 (670)
T PLN02217         80 TSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDPRTKMALDQCKELMDYAIGELSKSFEELGKFEF--HKVDEALIKL  157 (670)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cccccchhHH
Confidence            448999999999988887777652  112     2344999999999999999999999999974321  1123457999


Q ss_pred             HHHHHHHHhhhhhhhhccCCCchhHH---------------hhhhhcCCCCCCCCC---C--CCCC-CCCCCC--CCCC-
Q 040602           91 RTWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPSPNQWSN---G--FSNS-NSGGKG--CGGG-  146 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e~~~~~~---------------naLa~v~~~~~~~~~---~--~~r~-~~~g~P--v~~~-  146 (277)
                      |||||||||||+||+|||++.++.++               |+|+|+..+......   .  ..|+ ..++||  ++.+ 
T Consensus       158 qTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~lss~~~~~~~~~~~~r~l~~~~~P~W~~~~d  237 (670)
T PLN02217        158 RIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSEMSNYLGQMQIPEMNSRRLLSQEFPSWMDQRA  237 (670)
T ss_pred             HHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCcccccccccCCCCCCChhh
Confidence            99999999999999999976543221               999999886543221   1  1233 346899  7777 


Q ss_pred             CC--CC--CCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCC
Q 040602          147 GK--SI--NGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTE  216 (277)
Q Consensus       147 Rk--~~--~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~  216 (277)
                      ||  |.  +.++++++|++||+|+|+||||||+++|+++.+|++||||+|+      |+++|+||+|+||      |+++
T Consensus       238 RrlL~~~~~~~~~~~vVa~dGsG~f~TIq~Av~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~Gd------g~~~  311 (670)
T PLN02217        238 RRLLNAPMSEVKPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKAGIYKEYVQVNRSMTHLVFIGD------GPDK  311 (670)
T ss_pred             hhhhcCCcccCCccEEECCCCCCCccCHHHHHHhccccCCceEEEEEeCCceEEEEEEcCCCCcEEEEec------CCCC
Confidence            88  54  3488999999999999999999999999999999999999999      8999999999999      9999


Q ss_pred             eEEEcccccccc
Q 040602          217 TLMNSMRFLLNL  228 (277)
Q Consensus       217 TiIt~~~~~~~~  228 (277)
                      |||+|+++..++
T Consensus       312 TiIt~~~~~~dg  323 (670)
T PLN02217        312 TVISGSKSYKDG  323 (670)
T ss_pred             eEEEcCCccCCC
Confidence            999999887655

>PLN02990 Probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=9.3e-43  Score=349.49  Aligned_cols=203  Identities=23%  Similarity=0.284  Sum_probs=162.3

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh---h------cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCch
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF---N------QTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSS   88 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~---~------~l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~   88 (277)
                      ..+|++++++++.+++.++.+.+.   .      .+..+++.|++||+|||++++|+|++++++|.....  ..+....+
T Consensus        80 ~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~ELlddAvdeL~~Sl~~l~~~~~--~~~~~~~~  157 (572)
T PLN02990         80 STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKLMNDATDDLKKCLDNFDGFSI--DQIEDFVE  157 (572)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--ccccchhH
Confidence            358999999999988877766542   1      122344899999999999999999999999974321  11234579


Q ss_pred             hHHHHHHHHHhhhhhhhhccCCCchhHH---------------hhhhhcCCCCCCCCC-----------CCCCC---CCC
Q 040602           89 DLRTWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPSPNQWSN-----------GFSNS---NSG  139 (277)
Q Consensus        89 DvqTWLSAALTnq~TClDGF~e~~~~~~---------------naLa~v~~~~~~~~~-----------~~~r~---~~~  139 (277)
                      |+|||||||||||+||+|||++.++.++               |+|+|+..+......           ..+|+   ..+
T Consensus       158 DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~~~~~~~~~~~~~~~~~~~~~~~r~l~~~~~  237 (572)
T PLN02990        158 DLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITNISNLLGEFNITGLTGDLGKYARKLLSTED  237 (572)
T ss_pred             HHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence            9999999999999999999986542211               999999875542211           11233   234


Q ss_pred             CCC--CCCC-CC--C-CCCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEecc
Q 040602          140 GKG--CGGG-GK--S-INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVF  207 (277)
Q Consensus       140 g~P--v~~~-Rk--~-~~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~  207 (277)
                      +||  ++.+ ||  | ++.++++++|++||+|+|+||||||+++|+++.+|++||||+|+      ||++|+||+|+|+ 
T Consensus       238 ~~p~w~~~~drrll~~~~~~~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~r~vI~Ik~GvY~E~V~i~~~k~~i~l~G~-  316 (572)
T PLN02990        238 GIPSWVGPNTRRLMATKGGVKANVVVAQDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNEKVDVTKKMTHVTFIGD-  316 (572)
T ss_pred             CCCccCChhhhhhhhcccCCCceEEECCCCCCCCcCHHHHHhhCcccCCceEEEEEeCceeEEEEEecCCCCcEEEEec-
Confidence            899  7888 98  4 35688999999999999999999999999999999999999999      8999999999999 


Q ss_pred             ccCCCCCCCeEEEcccccccc
Q 040602          208 LHLLSEMTETLMNSMRFLLNL  228 (277)
Q Consensus       208 ~~~~~g~~~TiIt~~~~~~~~  228 (277)
                           |+++|||+|+++..++
T Consensus       317 -----g~~~TiIt~~~~~~~g  332 (572)
T PLN02990        317 -----GPTKTKITGSLNFYIG  332 (572)
T ss_pred             -----CCCceEEEeccccCCC
Confidence                 9999999999886543

>PLN02314 pectinesterase

Probab=100.00  E-value=1.8e-42  Score=348.55  Aligned_cols=206  Identities=21%  Similarity=0.249  Sum_probs=164.9

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc-----cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT-----IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l-----~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      ..+|+++++.++.+++.++.+...  .++     ..+.+.||+||+|+|++++|+|++++++|...++.........+|+
T Consensus        98 ~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~~~~~~~k~AL~DC~EllddAid~L~~Sl~~l~~~~~~~~~~~~~~~Dv  177 (586)
T PLN02314         98 TTDPETLFKLSLKVAIDELSKLSDLPQKLINETNDERLKSALRVCETLFDDAIDRLNDSISSMQVGEGEKILSSSKIDDL  177 (586)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccHHHH
Confidence            458999999999988887766542  222     2233899999999999999999999999964322110124567999


Q ss_pred             HHHHHHHHhhhhhhhhccCCC------chhHH---------------hhhhhcCCCCCCCCC---CCCCCC---C----C
Q 040602           91 RTWLSAALINHETCIDGFDGT------NSIVK---------------ELLTMVHPSPNQWSN---GFSNSN---S----G  139 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e~------~~~~~---------------naLa~v~~~~~~~~~---~~~r~~---~----~  139 (277)
                      +||||||||||+||+|||++.      ++.++               |+|+|+..+......   ..+|+.   +    +
T Consensus       178 ~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNaLAIi~~l~~~~~~~~~~~~~~l~~~~~~~~~  257 (586)
T PLN02314        178 KTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNSLAIVSKILGILSDLGIPIHRRLLSFHHDLSS  257 (586)
T ss_pred             HhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            999999999999999999754      22111               999999886543221   123331   1    4


Q ss_pred             CCC--CCCC-CC--CCCCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccc
Q 040602          140 GKG--CGGG-GK--SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFL  208 (277)
Q Consensus       140 g~P--v~~~-Rk--~~~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~  208 (277)
                      +||  ++.+ ||  |...++++++|++||+|+|+||||||+++|+++.+|++||||+|+      |+++|+||+|+|+  
T Consensus       258 ~~p~w~~~~~rrll~~~~~~~~~~Va~dGsg~f~TI~~Av~a~p~~~~~r~vI~ik~G~Y~E~V~i~~~k~~i~l~G~--  335 (586)
T PLN02314        258 GFPSWVNIGDRRLLQEEKPTPNVTVAKDGSGDVKTINEAVASIPKKSKSRFVIYVKEGTYVENVLLDKSKWNVMIYGD--  335 (586)
T ss_pred             CCCccccccchhhccccCCCccEEECCCCCCCccCHHHHHhhccccCCceEEEEEcCceEEEEEEecCCCceEEEEec--
Confidence            899  7888 98  666799999999999999999999999999999999999999999      8999999999999  


Q ss_pred             cCCCCCCCeEEEccccccccc
Q 040602          209 HLLSEMTETLMNSMRFLLNLH  229 (277)
Q Consensus       209 ~~~~g~~~TiIt~~~~~~~~~  229 (277)
                          |+++|||+|+++..+++
T Consensus       336 ----g~~~tiIt~~~~~~~g~  352 (586)
T PLN02314        336 ----GKDKTIISGSLNFVDGT  352 (586)
T ss_pred             ----CCCCcEEEecCCcCCCC
Confidence                99999999999887764

>PLN02197 pectinesterase

Probab=100.00  E-value=2.6e-42  Score=346.61  Aligned_cols=200  Identities=20%  Similarity=0.291  Sum_probs=159.2

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--h--------cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCc
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--N--------QTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLS   87 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~--------~l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~   87 (277)
                      ..+|++++++++.+++.++.+.+.  +        .+..+++.|++||+|||++++|+|++++.+++..   ........
T Consensus        63 s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~eLl~davd~L~~Sl~~l~~~---~~~~~~~~  139 (588)
T PLN02197         63 SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKRVFMYALEDLSTIVEEMGED---LNQIGSKI  139 (588)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccccccch
Confidence            457999999999988888876542  1        1223448999999999999999999999999731   11223457


Q ss_pred             hhHHHHHHHHHhhhhhhhhccCCCc--hhH-----------HhhhhhcCCCCCCCCC-----------------------
Q 040602           88 SDLRTWLSAALINHETCIDGFDGTN--SIV-----------KELLTMVHPSPNQWSN-----------------------  131 (277)
Q Consensus        88 ~DvqTWLSAALTnq~TClDGF~e~~--~~~-----------~naLa~v~~~~~~~~~-----------------------  131 (277)
                      +|+|||||||||||+||+|||++.+  ..+           .|+|+++..+...+..                       
T Consensus       140 ~DvqTWLSAALTnq~TClDGf~~~~~k~~v~~~l~nv~~LtSNaLAiv~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (588)
T PLN02197        140 DQLKQWLTGVYNYQTDCLDDIEEDDLRKTIGEGIANSKILTSNAIDIFHSVVSAMAKLNNKVDDFKNMTGGIPTPGAPPV  219 (588)
T ss_pred             hhHHHHHHHHHhChhhhhccccCcchHHHHHHHHHHHHHHHHHHHHHhhccchhhccccccccccccccccccccccccc
Confidence            9999999999999999999998743  111           1999998875431110                       


Q ss_pred             ----------CCCCCC-----CCCCC--CCCC-CC--CCC------------CcceeEEEecCCCcCcccHHHHHHHhhc
Q 040602          132 ----------GFSNSN-----SGGKG--CGGG-GK--SIN------------GVQGDVVVAADGTWNFTKIMDTVLATKD  179 (277)
Q Consensus       132 ----------~~~r~~-----~~g~P--v~~~-Rk--~~~------------~~~~~vvVa~dGsg~F~TIq~Aida~P~  179 (277)
                                ..+|+.     .++||  ++.. ||  |..            .++++++|++||+|+|+||||||+++|+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~r~ll~~~~~~~~~~~~~~~~~~~~~vVa~dGsG~f~TIq~Ai~a~P~  299 (588)
T PLN02197        220 VDESPVADPDGPARRLLEDIDETGIPTWVSGADRKLMAKAGRGANAGGGGGGKIKATHVVAKDGSGQFKTISQAVMACPD  299 (588)
T ss_pred             ccccccccccccccccccccccCCCCCCCCccchhhhccCcccccccccccccccccEEEcCCCCCCcCCHHHHHHhccc
Confidence                      011331     24899  8888 88  432            2778999999999999999999999999


Q ss_pred             CCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          180 YNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       180 ~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      ++++|++||||+|+      ||++|+||+|+||      |+++|||+|++++.
T Consensus       300 ~~~~r~vI~Ik~GvY~E~V~I~~~k~ni~l~G~------g~~~TiIt~~~~~~  346 (588)
T PLN02197        300 KNPGRCIIHIKAGIYNEQVTIPKKKNNIFMFGD------GARKTVISYNRSVK  346 (588)
T ss_pred             cCCceEEEEEeCceEEEEEEccCCCceEEEEEc------CCCCeEEEeccccc
Confidence            99999999999999      8999999999999      99999999999874

>PLN02313 Pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=2.7e-42  Score=347.14  Aligned_cols=204  Identities=22%  Similarity=0.318  Sum_probs=162.1

Q ss_pred             cChHHHHHHHHHHHHHhhhchhh--hc-------ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchh
Q 040602           19 SLPSLLWRSVMVGVVVNILTPFF--NQ-------TIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSD   89 (277)
Q Consensus        19 ~~p~~l~~~a~~~~~~~~~~~~~--~~-------l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~D   89 (277)
                      .+|+++++.++..++.++.+...  +.       +..+++.||+||+|||++++|+|+++++++...++ ......+.+|
T Consensus        88 ~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELlddavD~L~~Sl~~l~~~~~-~~~~~~~~dD  166 (587)
T PLN02313         88 TSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPK-QKSLRKHADD  166 (587)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccccccchhH
Confidence            36899999999988887766542  11       22334899999999999999999999999975321 1122345799


Q ss_pred             HHHHHHHHHhhhhhhhhccCCCc--hhHH---------------hhhhhcCCCCC-CCC----------C--CCCCC--C
Q 040602           90 LRTWLSAALINHETCIDGFDGTN--SIVK---------------ELLTMVHPSPN-QWS----------N--GFSNS--N  137 (277)
Q Consensus        90 vqTWLSAALTnq~TClDGF~e~~--~~~~---------------naLa~v~~~~~-~~~----------~--~~~r~--~  137 (277)
                      +|||||||||||+||+|||++.+  +.++               |+|+|+..+.. ...          +  ..+|+  .
T Consensus       167 lqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~  246 (587)
T PLN02313        167 LKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSSFTNNNNRKLKE  246 (587)
T ss_pred             HHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccc
Confidence            99999999999999999997432  1111               99999987653 111          0  11222  1


Q ss_pred             ------CCCCC--CCCC-CC--CCCCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCcc
Q 040602          138 ------SGGKG--CGGG-GK--SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWD  200 (277)
Q Consensus       138 ------~~g~P--v~~~-Rk--~~~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~n  200 (277)
                            .++||  ++.+ ||  |...+++++||++||+|+|+||||||+++|+++.+||+||||+|+      |+++|+|
T Consensus       247 ~~~~~~~~~~P~W~~~~dr~ll~~~~~~~~~vVa~dGsG~f~TI~~Av~a~p~~~~~r~vI~ik~GvY~E~V~i~~~k~n  326 (587)
T PLN02313        247 VTGDLDSEGWPTWLSVGDRRLLQGSTIKADATVAADGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKKN  326 (587)
T ss_pred             ccccccccCCCcCccccchhhhcccCCCCCEEECCCCCCCCccHHHHHHhccccCCceEEEEEeCceeEEEEEeCCCCCe
Confidence                  24899  8888 88  666799999999999999999999999999999999999999999      8999999


Q ss_pred             EEEEeccccCCCCCCCeEEEccccccccc
Q 040602          201 RLFVAVFLHLLSEMTETLMNSMRFLLNLH  229 (277)
Q Consensus       201 I~l~Gd~~~~~~g~~~TiIt~~~~~~~~~  229 (277)
                      |||+||      |+++|||||+++..++.
T Consensus       327 i~l~Gd------g~~~TiIt~~~~~~~g~  349 (587)
T PLN02313        327 IMFLGD------GRGKTIITGSRNVVDGS  349 (587)
T ss_pred             EEEEec------CCCccEEEeCCcccCCC
Confidence            999999      99999999999987653

>PLN02201 probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=7.5e-42  Score=339.34  Aligned_cols=207  Identities=44%  Similarity=0.604  Sum_probs=160.6

Q ss_pred             hhhcChHHHHHHHHHHHHHhhhchhh--hcc-----cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCch
Q 040602           16 FMKSLPSLLWRSVMVGVVVNILTPFF--NQT-----IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSS   88 (277)
Q Consensus        16 f~~~~p~~l~~~a~~~~~~~~~~~~~--~~l-----~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~   88 (277)
                      |-...+..+++.++.+++.++.+...  +.+     ..++++|++||+||+++++|+|++|+.+|+...+.........+
T Consensus        32 ~~~~~~~~~~~~~L~~tl~~a~~a~~~vs~l~~~~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~  111 (520)
T PLN02201         32 ECLKVPPSEFVSSLKTTVDVIRKVVSIVSQFDKVFGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGS  111 (520)
T ss_pred             hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchh
Confidence            33445667788888877776666552  222     22348999999999999999999999999754221111134579


Q ss_pred             hHHHHHHHHHhhhhhhhhccCCCchhHH---------------hhhhhcCCCCCCCC-CCCCCC-------CCCCCC--C
Q 040602           89 DLRTWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPSPNQWS-NGFSNS-------NSGGKG--C  143 (277)
Q Consensus        89 DvqTWLSAALTnq~TClDGF~e~~~~~~---------------naLa~v~~~~~~~~-~~~~r~-------~~~g~P--v  143 (277)
                      |+|||||||||||+||+|||++.++..+               |+|++++....... ....|+       ..++||  +
T Consensus       112 DvqTWLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~  191 (520)
T PLN02201        112 DLRTWLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHPPPSKGKSKPIGGGTMTKKHSGSSKFPSWV  191 (520)
T ss_pred             HHHHHHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccCCCCCCCc
Confidence            9999999999999999999986532111               99999987432211 111121       235799  7


Q ss_pred             CCC-CC--CCCCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCC
Q 040602          144 GGG-GK--SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEM  214 (277)
Q Consensus       144 ~~~-Rk--~~~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~  214 (277)
                      +.. ||  +...++++++|++||+|+|+||||||+++|+++.+|++||||+|+      ||++|+||+|+|+      |+
T Consensus       192 ~~~~r~ll~~~~~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~------g~  265 (520)
T PLN02201        192 KPEDRKLLQTNGVTPDVVVAADGTGNFTTIMDAVLAAPDYSTKRYVIYIKKGVYLENVEIKKKKWNIMMVGD------GI  265 (520)
T ss_pred             CccchhhhhccCCCceEEEcCCCCCCccCHHHHHHhchhcCCCcEEEEEeCceeEEEEEecCCCceEEEEec------CC
Confidence            877 98  555688999999999999999999999999999999999999999      9999999999999      99


Q ss_pred             CCeEEEcccccccc
Q 040602          215 TETLMNSMRFLLNL  228 (277)
Q Consensus       215 ~~TiIt~~~~~~~~  228 (277)
                      ++|||||++++.++
T Consensus       266 ~~TiIt~~~~~~~g  279 (520)
T PLN02201        266 DATVITGNRSFIDG  279 (520)
T ss_pred             CCcEEEeCCccCCC
Confidence            99999999997654

>PLN02468 putative pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1e-41  Score=341.69  Aligned_cols=201  Identities=22%  Similarity=0.301  Sum_probs=162.7

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc-------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCch
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT-------IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSS   88 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l-------~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~   88 (277)
                      ..+|+++++.++.+++.++.+...  ..+       ..+++.|++||+|||++++|+|+++++++...+    . ....+
T Consensus        92 ~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELlddaid~L~~Sl~~l~~~~----~-~~~~d  166 (565)
T PLN02468         92 QLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELLDLAIDNLNNSLTSSGGVS----V-LDNVD  166 (565)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----c-ccchH
Confidence            458999999999988887766552  111       223399999999999999999999999996421    1 35679


Q ss_pred             hHHHHHHHHHhhhhhhhhccCCCc--hhHH-----------hhhhhcCCCCCCCCC-CCCCC----CCCCCC--CCCC-C
Q 040602           89 DLRTWLSAALINHETCIDGFDGTN--SIVK-----------ELLTMVHPSPNQWSN-GFSNS----NSGGKG--CGGG-G  147 (277)
Q Consensus        89 DvqTWLSAALTnq~TClDGF~e~~--~~~~-----------naLa~v~~~~~~~~~-~~~r~----~~~g~P--v~~~-R  147 (277)
                      |+|||||||||||+||+|||++.+  ..++           |+|+|+..+...... ...|+    .+++||  ++.+ |
T Consensus       167 Dl~TWLSAAlTnq~TClDGF~e~~vk~~~~~~l~n~~eLtSNaLAIi~~l~~~~~~~~~~r~~~~~~~~~~p~w~~~~~r  246 (565)
T PLN02468        167 DLRTWLSSAGTYQETCIDGLAEPNLKSFGENHLKNSTELTSNSLAIITWIGKIADSVKLRRRLLTYADDAVPKWLHHEGR  246 (565)
T ss_pred             HHHHHHHHHhcchhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHhhccccccccccccCccccccCCCCcccccccch
Confidence            999999999999999999997642  1111           999999886543321 11223    234899  8888 9


Q ss_pred             C--CCC--CcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCe
Q 040602          148 K--SIN--GVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTET  217 (277)
Q Consensus       148 k--~~~--~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~T  217 (277)
                      |  |..  .++++++|++||+|+|+||||||+++|+++.+|++||||+|+      |+++|+||+|+||      |+++|
T Consensus       247 ~ll~~~~~~~~~~~~Va~dGsg~f~tI~~Av~a~p~~~~~~~vI~ik~GvY~E~V~i~~~k~~i~~~G~------g~~~t  320 (565)
T PLN02468        247 KLLQSSDLKKKADIVVAKDGSGKYKTISEALKDVPEKSEKRTIIYVKKGVYFENVRVEKKKWNVVMVGD------GMSKT  320 (565)
T ss_pred             hhhcCCcccCCCcEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCceEEEEEecCCCCeEEEEec------CCCCC
Confidence            8  543  478999999999999999999999999999999999999999      8999999999999      99999


Q ss_pred             EEEccccccccc
Q 040602          218 LMNSMRFLLNLH  229 (277)
Q Consensus       218 iIt~~~~~~~~~  229 (277)
                      ||+|+++..++.
T Consensus       321 iIt~~~~~~dg~  332 (565)
T PLN02468        321 IVSGSLNFVDGT  332 (565)
T ss_pred             EEEeCCccCCCC
Confidence            999999887664

>PLN02484 probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=8.7e-42  Score=343.34  Aligned_cols=200  Identities=26%  Similarity=0.372  Sum_probs=161.5

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--h-----cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--N-----QTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~-----~l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      ..+|++++++++..++.++.+...  .     .+..+++.||+||+|+|++++|+|++++.+|....+     ....+|+
T Consensus       101 ~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~~~~~~r~k~AL~DClELlddAid~L~~Sl~~l~~~~~-----~~~~~Dv  175 (587)
T PLN02484        101 TASESDLIHISFNMTLQHFSKALYLSSTISYVQMPPRVRSAYDSCLELLDDSVDALSRALSSVVPSSG-----GGSPQDV  175 (587)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----ccchHHH
Confidence            448999999999988887766541  1     122334899999999999999999999999974321     3457999


Q ss_pred             HHHHHHHHhhhhhhhhccCCCc-hhHH---------------hhhhhcCCCCC-CCCC---CCCCC-C----CCCCC--C
Q 040602           91 RTWLSAALINHETCIDGFDGTN-SIVK---------------ELLTMVHPSPN-QWSN---GFSNS-N----SGGKG--C  143 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e~~-~~~~---------------naLa~v~~~~~-~~~~---~~~r~-~----~~g~P--v  143 (277)
                      +||||||||||+||+|||++.+ +.++               |+|+|+..+.. ...+   ...|+ .    .++||  +
T Consensus       176 kTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~~~~~~~~~~~~~~r~l~~~~~~~~~P~W~  255 (587)
T PLN02484        176 VTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSASNGGDFSGVPIQNRRRLLTEEEDISFPRWL  255 (587)
T ss_pred             HhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccCCCCc
Confidence            9999999999999999998652 2111               99999988664 3322   11233 2    24899  8


Q ss_pred             CCC-CC--CC--CCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc-------ccccCccEEEEeccccCC
Q 040602          144 GGG-GK--SI--NGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL-------IPLPHWDRLFVAVFLHLL  211 (277)
Q Consensus       144 ~~~-Rk--~~--~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv-------I~~~k~nI~l~Gd~~~~~  211 (277)
                      +.+ ||  |.  +.++++++|++||+|+|+||||||+++|.++.+|++||||+|+       ||++|+||+|+|+     
T Consensus       256 ~~~dr~ll~~~~~~~~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~~v~i~~~k~ni~l~G~-----  330 (587)
T PLN02484        256 GRRERELLGMPVSAIQADIIVSKDGNGTFKTISEAIKKAPEHSSRRTIIYVKAGRYEENNLKVGRKKTNLMFIGD-----  330 (587)
T ss_pred             ChhhHHHhhcccccCCceEEECCCCCCCcccHHHHHHhccccCCCcEEEEEeCCEEEEEEEEECCCCceEEEEec-----
Confidence            888 88  53  3488999999999999999999999999999999999999998       8889999999999     


Q ss_pred             CCCCCeEEEcccccccc
Q 040602          212 SEMTETLMNSMRFLLNL  228 (277)
Q Consensus       212 ~g~~~TiIt~~~~~~~~  228 (277)
                       |+++|||||++++.++
T Consensus       331 -g~~~TiIt~~~~~~~~  346 (587)
T PLN02484        331 -GKGKTVITGGKSIFDN  346 (587)
T ss_pred             -CCCCeEEecCCcccCC
Confidence             9999999999987554

>PLN02933 Probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.2e-41  Score=338.06  Aligned_cols=204  Identities=22%  Similarity=0.265  Sum_probs=164.6

Q ss_pred             ccchh-hhcChHHHHHHHHHHHHHhhhchhh--hcc--------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 040602           12 HRSVF-MKSLPSLLWRSVMVGVVVNILTPFF--NQT--------IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKL   80 (277)
Q Consensus        12 ~~~~f-~~~~p~~l~~~a~~~~~~~~~~~~~--~~l--------~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~   80 (277)
                      ..+-| +..+|++++++++.+++.++.+...  +.+        ..++++|++||+|||++++|+|++++.++...    
T Consensus        41 ~~~~~~~~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~----  116 (530)
T PLN02933         41 KTQRLTETKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSS----  116 (530)
T ss_pred             hhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----
Confidence            34444 6789999999999988888777652  222        23348999999999999999999999998642    


Q ss_pred             CCCCCCchhHHHHHHHHHhhhhhhhhccCCCc--------hhHH---------------hhhhhcCCCCCCCCCCCCCCC
Q 040602           81 NGSGDLSSDLRTWLSAALINHETCIDGFDGTN--------SIVK---------------ELLTMVHPSPNQWSNGFSNSN  137 (277)
Q Consensus        81 ~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~--------~~~~---------------naLa~v~~~~~~~~~~~~r~~  137 (277)
                         ....+|+|||||||||||+||+|||.+.+        +.++               |+|+|+..+.......+....
T Consensus       117 ---~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~~~~~~~~~~~  193 (530)
T PLN02933        117 ---SPEFNDVSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISGKIPGPKSSEV  193 (530)
T ss_pred             ---ccchhHHHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCccccc
Confidence               13479999999999999999999997543        1111               999999876543221111113


Q ss_pred             CCCCC--CCCC-CC--CC--CCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEE
Q 040602          138 SGGKG--CGGG-GK--SI--NGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFV  204 (277)
Q Consensus       138 ~~g~P--v~~~-Rk--~~--~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~  204 (277)
                      .++||  ++.. ||  +.  ..++++++|++||+|+|+|||+|||++|.++.+|++||||+|+      ||++|+||+|+
T Consensus       194 ~~~~p~w~~~~~r~ll~~~~~~~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~itl~  273 (530)
T PLN02933        194 DVEYPSWVSGNDRRLLEAPVQETNVNLSVAIDGTGNFTTINEAVSAAPNSSETRFIIYIKGGEYFENVELPKKKTMIMFI  273 (530)
T ss_pred             cCCCCCCcChhhhhhhcCCcccCcceEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEcCceEEEEEEecCCCceEEEE
Confidence            45899  7777 88  53  3488999999999999999999999999999999999999999      89999999999


Q ss_pred             eccccCCCCCCCeEEEcccccccc
Q 040602          205 AVFLHLLSEMTETLMNSMRFLLNL  228 (277)
Q Consensus       205 Gd~~~~~~g~~~TiIt~~~~~~~~  228 (277)
                      |+      |+++|||+|+++..++
T Consensus       274 G~------g~~~TiIt~~~~~~dg  291 (530)
T PLN02933        274 GD------GIGKTVIKANRSRIDG  291 (530)
T ss_pred             Ec------CCCCcEEEeCCccCCC
Confidence            99      9999999999997665

>PLN02506 putative pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.7e-41  Score=338.25  Aligned_cols=202  Identities=21%  Similarity=0.322  Sum_probs=160.8

Q ss_pred             cChHHHHHHHHHHHHHhhhchhh--hcc-----cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHH
Q 040602           19 SLPSLLWRSVMVGVVVNILTPFF--NQT-----IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR   91 (277)
Q Consensus        19 ~~p~~l~~~a~~~~~~~~~~~~~--~~l-----~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dvq   91 (277)
                      .+|.+++++++.+++.++.+...  ..+     ..++++|++||+|+|++|+++|++++.+++...... ......+|+|
T Consensus        64 ~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~~~~~r~~~Al~DC~EllddSvd~L~~Sl~el~~~~~~~-~~~~~~~Dv~  142 (537)
T PLN02506         64 RTPHSVLSAALKATLDEARLAIDMITKFNALSISYREQVAIEDCKELLDFSVSELAWSLLEMNKIRAGH-DNVAYEGNLK  142 (537)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-ccccchhhHH
Confidence            47999999999988887777652  222     234489999999999999999999999996432100 1112368999


Q ss_pred             HHHHHHHhhhhhhhhccCCCchhHH---------------hhhhhcCCCCCCCCCCCCCC-----CCCCCC--CCCC-CC
Q 040602           92 TWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHPSPNQWSNGFSNS-----NSGGKG--CGGG-GK  148 (277)
Q Consensus        92 TWLSAALTnq~TClDGF~e~~~~~~---------------naLa~v~~~~~~~~~~~~r~-----~~~g~P--v~~~-Rk  148 (277)
                      ||||||||||+||+|||++.++.++               |+|+|+..+.. +.+..+|+     ..++||  ++.. ||
T Consensus       143 TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNALAiv~~l~~-l~~~~~~~~~~~~~~~~~p~w~~~~~r~  221 (537)
T PLN02506        143 AWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVLAMYTQLHS-LPFKPSRNETETAPSSKFPEWMTEGDQE  221 (537)
T ss_pred             hHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-cccCCCccccccccCCCCCCCcCccchh
Confidence            9999999999999999986543111               99999987553 11112222     235799  7888 88


Q ss_pred             --CC--CCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeE
Q 040602          149 --SI--NGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETL  218 (277)
Q Consensus       149 --~~--~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~Ti  218 (277)
                        +.  ..++++++|++||+|+|+|||||||++|.++.+|++||||+|+      |+++|+||||+||      |+++||
T Consensus       222 ll~~~~~~~~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~r~vI~Vk~GvY~E~V~I~~~k~~i~l~G~------g~~~ti  295 (537)
T PLN02506        222 LLKHDPLGMHVDTIVALDGSGHYRTITEAINEAPNHSNRRYIIYVKKGVYKENIDMKKKKTNIMLVGD------GIGQTV  295 (537)
T ss_pred             hhcCCcccCCceEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeeEEEeccCCCceEEEEEc------CCCCeE
Confidence              53  3588999999999999999999999999999999999999999      8999999999999      999999


Q ss_pred             EEcccccccc
Q 040602          219 MNSMRFLLNL  228 (277)
Q Consensus       219 It~~~~~~~~  228 (277)
                      |+|+++..++
T Consensus       296 It~~~~~~~g  305 (537)
T PLN02506        296 VTGNRNFMQG  305 (537)
T ss_pred             EEeCccccCC
Confidence            9999887543

>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional

Probab=100.00  E-value=2.3e-41  Score=337.61  Aligned_cols=200  Identities=18%  Similarity=0.207  Sum_probs=155.1

Q ss_pred             ChHHHHHHHHHHHHHhhhchhh--hc----------ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCc
Q 040602           20 LPSLLWRSVMVGVVVNILTPFF--NQ----------TIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLS   87 (277)
Q Consensus        20 ~p~~l~~~a~~~~~~~~~~~~~--~~----------l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~   87 (277)
                      +|.+++++++.+++.++.+...  +.          +..+++.|++||+|||++|+|+|++++.+|+....   ......
T Consensus        28 ~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELlddSvD~L~~Sl~~L~~~~~---~~~~~~  104 (538)
T PLN03043         28 DPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSELNVDYLETISSELKSAEL---MTDALV  104 (538)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccch
Confidence            7999999999988887666542  21          22334799999999999999999999999975321   123457


Q ss_pred             hhHHHHHHHHHhhhhhhhhccCCCchhHH---------------hhhhhcCC-CCCCCCC-----------CC--CC-C-
Q 040602           88 SDLRTWLSAALINHETCIDGFDGTNSIVK---------------ELLTMVHP-SPNQWSN-----------GF--SN-S-  136 (277)
Q Consensus        88 ~DvqTWLSAALTnq~TClDGF~e~~~~~~---------------naLa~v~~-~~~~~~~-----------~~--~r-~-  136 (277)
                      +|+|||||||||||+||+|||.+.++.++               |+|+|+.. ....+..           .+  .| + 
T Consensus       105 ~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~~~s~~~~~~~~~~~~~~~~~~~~~~~~l  184 (538)
T PLN03043        105 ERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSHALNRNLKKYKGRKGKIHGGGNKTVREPL  184 (538)
T ss_pred             hhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCccccchhh
Confidence            99999999999999999999986543221               99999985 2221110           00  11 1 


Q ss_pred             -------CCCCCC--CCCC-CC--CC----C----CcceeEEEecCCCcCcccHHHHHHHhhcCC---CceEEEEEeccc
Q 040602          137 -------NSGGKG--CGGG-GK--SI----N----GVQGDVVVAADGTWNFTKIMDTVLATKDYN---MKRFVIYIKRGL  193 (277)
Q Consensus       137 -------~~~g~P--v~~~-Rk--~~----~----~~~~~vvVa~dGsg~F~TIq~Aida~P~~~---~~~~vI~Ik~Gv  193 (277)
                             ..+|||  ++.. ||  +.    .    .+++++||++||+|+|+||||||+++|.++   .+|++||||+|+
T Consensus       185 ~~~~~~~~~~~~p~w~~~~~~r~l~~~~~~~~~~~~~~~~~vVa~dGsG~f~TI~~Av~a~p~~~~~~~~r~vI~vk~G~  264 (538)
T PLN03043        185 ETLIKVLRKSCDKSKDCRRGERNLGELGETSGGSILVSDAVIVGPYGTDNFTTITDAIAAAPNNSKPEDGYFVIYAREGY  264 (538)
T ss_pred             hcccccccccCCccccccccchhhhcccccCCcccccCccEEECCCCCCCCcCHHHHHHhccccCCCCcceEEEEEcCee
Confidence                   124899  7766 55  32    2    244899999999999999999999999986   369999999999


Q ss_pred             ------ccccCccEEEEeccccCCCCCCCeEEEcccccccc
Q 040602          194 ------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNL  228 (277)
Q Consensus       194 ------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~~~  228 (277)
                            |+++|+||||+||      |+++|||||++++.++
T Consensus       265 Y~E~V~i~~~k~~i~l~G~------g~~~tiIt~~~~~~dg  299 (538)
T PLN03043        265 YEEYVVVPKNKKNIMLIGD------GINKTIITGNHSVVDG  299 (538)
T ss_pred             eEEEEEeCCCCCcEEEEec------CCCCeEEEeCCccCCC
Confidence                  8999999999999      9999999999998765

>PLN02301 pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=3.3e-41  Score=336.60  Aligned_cols=197  Identities=22%  Similarity=0.325  Sum_probs=160.7

Q ss_pred             cChHHHHHHHHHHHHHhhhchhh--hcc-----cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHH
Q 040602           19 SLPSLLWRSVMVGVVVNILTPFF--NQT-----IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR   91 (277)
Q Consensus        19 ~~p~~l~~~a~~~~~~~~~~~~~--~~l-----~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dvq   91 (277)
                      ..|.+++++++.+++.++.+...  +.+     ..++++|++||+|||++++|+|++++++++...      ....+|+|
T Consensus        81 ~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~~~~~~~~~aAL~DC~ELl~davd~L~~Sl~~l~~~~------~~~~~Dv~  154 (548)
T PLN02301         81 LNRVDLLQVLLKESTPHLQNTIEMASEIRIRINDPRDKAALADCVELMDLSKDRIKDSVEALGNVT------SKSHADAH  154 (548)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------ccchHHHH
Confidence            47999999999988887776652  222     223489999999999999999999999997532      13469999


Q ss_pred             HHHHHHHhhhhhhhhccCCCch-hHH-----------hhhhhcCCCCCCCCCCCCCCCCCCCC--CCCC-CC--CC--CC
Q 040602           92 TWLSAALINHETCIDGFDGTNS-IVK-----------ELLTMVHPSPNQWSNGFSNSNSGGKG--CGGG-GK--SI--NG  152 (277)
Q Consensus        92 TWLSAALTnq~TClDGF~e~~~-~~~-----------naLa~v~~~~~~~~~~~~r~~~~g~P--v~~~-Rk--~~--~~  152 (277)
                      ||||||||||+||+|||.+... .++           |+|+|+..+...... ..|+..++||  ++.+ ||  +.  ..
T Consensus       155 TWLSAALT~q~TC~DGF~~~~~~~~~~~l~n~~qL~SNsLAiv~~l~~~~~~-~~~~~~~~~p~w~~~~~r~ll~~~~~~  233 (548)
T PLN02301        155 TWLSSVLTNHVTCLDGINGPSRQSMKPGLKDLISRARTSLAILVSVSPAKED-LLMPLSGDFPSWLTSKDRKLLESSPKN  233 (548)
T ss_pred             HHHHHHhcchhhHHhhhhhhhhhhHHHHHHHHHHHHHHHHHhhccccccccc-ccccccCCCCCCcCccchhhhhccccc
Confidence            9999999999999999976531 111           899999875533221 1233456899  7888 88  43  34


Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      ++++++|++||+|+|+||||||+++|+++.+|++||||+|+      |+++|+||+|+||      |+++|||||+++..
T Consensus       234 ~~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~------g~~~TiIt~~~~~~  307 (548)
T PLN02301        234 IKANVVVAKDGSGKYKTVKEAVASAPDNSKTRYVIYVKKGTYKENVEIGKKKKNLMLVGD------GMDSTIITGSLNVI  307 (548)
T ss_pred             CCccEEECCCCCCCcccHHHHHHhhhhcCCceEEEEEeCceeeEEEEecCCCceEEEEec------CCCCcEEEeCCccC
Confidence            78999999999999999999999999999999999999999      8999999999999      99999999998876


Q ss_pred             cc
Q 040602          227 NL  228 (277)
Q Consensus       227 ~~  228 (277)
                      ++
T Consensus       308 dg  309 (548)
T PLN02301        308 DG  309 (548)
T ss_pred             CC
Confidence            65

>PLN02713 Probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.1e-40  Score=334.23  Aligned_cols=203  Identities=21%  Similarity=0.224  Sum_probs=155.7

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc--------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCc
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT--------IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLS   87 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l--------~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~   87 (277)
                      ..+|.+++++++.+++.++.+...  +.+        ..+++.|++||+|||++|+|+|++++.+++...+.  ......
T Consensus        57 ~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC~ELlddavD~L~~Sl~~l~~~~~~--~~~~~~  134 (566)
T PLN02713         57 PGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQFLAGLNIDFLLSSFETVNSSSKT--LSDPQA  134 (566)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--ccccch
Confidence            447899999999988777666542  111        23348999999999999999999999999743211  124568


Q ss_pred             hhHHHHHHHHHhhhhhhhhccCCCc--hh----HH-----------hhhhhcCC--CCCCCCC--C-----CCCC----C
Q 040602           88 SDLRTWLSAALINHETCIDGFDGTN--SI----VK-----------ELLTMVHP--SPNQWSN--G-----FSNS----N  137 (277)
Q Consensus        88 ~DvqTWLSAALTnq~TClDGF~e~~--~~----~~-----------naLa~v~~--~~~~~~~--~-----~~r~----~  137 (277)
                      +|+|||||||||||+||+|||++.+  ..    ++           |+|+|+..  .......  .     ..|+    .
T Consensus       135 ~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLAlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (566)
T PLN02713        135 DDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLALFTKGWVPKKKKGRPKTKRKAHFKPFRAFR  214 (566)
T ss_pred             hhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccchhccc
Confidence            9999999999999999999998653  11    11           99999987  3322211  0     1122    2


Q ss_pred             CCCCC--CCCC----------CC--CCC--Ccce--eEEEecCCCcCcccHHHHHHHhhcC---CCceEEEEEeccc---
Q 040602          138 SGGKG--CGGG----------GK--SIN--GVQG--DVVVAADGTWNFTKIMDTVLATKDY---NMKRFVIYIKRGL---  193 (277)
Q Consensus       138 ~~g~P--v~~~----------Rk--~~~--~~~~--~vvVa~dGsg~F~TIq~Aida~P~~---~~~~~vI~Ik~Gv---  193 (277)
                      .++||  ++.+          ||  |..  .+++  +++|++||+|+|+||||||+++|++   +.+|++||||+|+   
T Consensus       215 ~~~~P~w~~~~d~~~~~~~~~R~ll~~~~~~~~~~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~~~~~~vI~Ik~G~Y~E  294 (566)
T PLN02713        215 NGRLPLKMTEKTRAVYESVSRRKLLDGDANAVLVSDIVTVNQNGTGNFTTINDAVAAAPNNTDGSNGYFVIYVTAGVYEE  294 (566)
T ss_pred             cCCCCcCccccccccccccccchhhcCccccccCCceEEECCCCCCCCCCHHHHHHhhhcccCCCCceEEEEEcCcEEEE
Confidence            34799  6544          55  432  2343  6999999999999999999999997   5679999999999   


Q ss_pred             ---ccccCccEEEEeccccCCCCCCCeEEEcccccccc
Q 040602          194 ---IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNL  228 (277)
Q Consensus       194 ---I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~~~  228 (277)
                         ||++|+||+|+||      |+++|||+|++++.++
T Consensus       295 ~V~i~~~k~~i~l~G~------g~~~TiIt~~~~~~~g  326 (566)
T PLN02713        295 YVSIPKNKKYLMMIGD------GINQTVITGNRSVVDG  326 (566)
T ss_pred             EEEecCCCceEEEEec------CCCCcEEEcCCcccCC
Confidence               8999999999999      9999999999998665

>PLN02745 Putative pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.8e-40  Score=334.24  Aligned_cols=201  Identities=22%  Similarity=0.275  Sum_probs=160.3

Q ss_pred             cChHHHHHHHHHHHHHhhhchhh--hcc---cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHHHH
Q 040602           19 SLPSLLWRSVMVGVVVNILTPFF--NQT---IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTW   93 (277)
Q Consensus        19 ~~p~~l~~~a~~~~~~~~~~~~~--~~l---~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~DvqTW   93 (277)
                      .+|++++++++.+++.++.+.+.  ..+   ..+++.|++||+|||++++|+|+++++++.. .  ...+....+|++||
T Consensus       110 ~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~~~~~r~k~Al~DC~ELlddAid~L~~Sl~~l~~-~--~~~~~~~~~Dv~TW  186 (596)
T PLN02745        110 AQPKDLLKSAIKAVNDDLDKVLKKVLSFKFENPDEKDAIEDCKLLVEDAKEELKASISRIND-E--VNKLAKNVPDLNNW  186 (596)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c--ccccccchHHHHHH
Confidence            37999999999988887776552  111   2334999999999999999999999999964 1  11234678999999


Q ss_pred             HHHHHhhhhhhhhccCCCc--hhHH-----------hhhhhcCCCCCCCC---CCC--CCC-----------CCCCCC--
Q 040602           94 LSAALINHETCIDGFDGTN--SIVK-----------ELLTMVHPSPNQWS---NGF--SNS-----------NSGGKG--  142 (277)
Q Consensus        94 LSAALTnq~TClDGF~e~~--~~~~-----------naLa~v~~~~~~~~---~~~--~r~-----------~~~g~P--  142 (277)
                      ||||||||+||+|||++..  ..++           |+|+|++.+.....   .+.  .|+           ..++||  
T Consensus       187 LSAALT~q~TClDGF~e~~l~s~m~~~l~~~~eLtSNALAiv~~lss~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~p~w  266 (596)
T PLN02745        187 LSAVMSYQETCIDGFPEGKLKSEMEKTFKSSQELTSNSLAMVSSLTSFLSSFSVPKVLNRHLLAKESNSPSLEKDGIPSW  266 (596)
T ss_pred             HHHHhccHhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCcccccccccccccccccccCCCCcC
Confidence            9999999999999998742  1111           99999987543211   111  232           124799  


Q ss_pred             CCCC-CC--CC---CCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccC
Q 040602          143 CGGG-GK--SI---NGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHL  210 (277)
Q Consensus       143 v~~~-Rk--~~---~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~  210 (277)
                      ++.. ||  +.   ..++++++|++||+|+|+||||||+++|+++.+|++||||+|+      ||++|+||+|+|+    
T Consensus       267 ~~~~dr~ll~~~~~~~~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~----  342 (596)
T PLN02745        267 MSNEDRRMLKAVDVDALKPNATVAKDGSGNFTTISDALAAMPAKYEGRYVIYVKQGIYDETVTVDKKMVNVTMYGD----  342 (596)
T ss_pred             cchhhhhhhhcCCccCccceEEECCCCCCCcccHHHHHHhccccCCceEEEEEeCCeeEEEEEEcCCCceEEEEec----
Confidence            7888 88  43   2488999999999999999999999999999999999999999      8999999999999    


Q ss_pred             CCCCCCeEEEcccccccc
Q 040602          211 LSEMTETLMNSMRFLLNL  228 (277)
Q Consensus       211 ~~g~~~TiIt~~~~~~~~  228 (277)
                        |+++|||+|+++..++
T Consensus       343 --g~~~TiIt~~~~~~~g  358 (596)
T PLN02745        343 --GSQKTIVTGNKNFADG  358 (596)
T ss_pred             --CCCceEEEECCcccCC
Confidence              9999999999876554

>PLN02416 probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=2.4e-40  Score=330.26  Aligned_cols=196  Identities=20%  Similarity=0.252  Sum_probs=152.4

Q ss_pred             ChHHHHHHHHHHHHHhhhchhh--hc------ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHH
Q 040602           20 LPSLLWRSVMVGVVVNILTPFF--NQ------TIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR   91 (277)
Q Consensus        20 ~p~~l~~~a~~~~~~~~~~~~~--~~------l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dvq   91 (277)
                      .|..+++.++..+..++.....  ..      +..++++|++||+|+|++|+|+|++++.+|+..+      ....+|+|
T Consensus        69 ~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~DC~El~~dAvD~L~~Sl~~L~~~~------~~~~~Dvq  142 (541)
T PLN02416         69 NILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKELHQITVSSLKRSVSRIQAGD------SRKLADAR  142 (541)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------ccchhhHH
Confidence            4556777777655444433321  11      1233489999999999999999999999997421      13679999


Q ss_pred             HHHHHHHhhhhhhhhccCCCchh----HH-----------hhhhhcCCCCCCCCCCCCCCCCCCCC--CCCC-CC--CCC
Q 040602           92 TWLSAALINHETCIDGFDGTNSI----VK-----------ELLTMVHPSPNQWSNGFSNSNSGGKG--CGGG-GK--SIN  151 (277)
Q Consensus        92 TWLSAALTnq~TClDGF~e~~~~----~~-----------naLa~v~~~~~~~~~~~~r~~~~g~P--v~~~-Rk--~~~  151 (277)
                      ||||||||||+||+|||++.++.    ++           |+|+++...........+|+. .+||  ++.+ ||  |..
T Consensus       143 TWLSAALT~q~TC~DGF~~~~~~~~~~i~~~~~~v~qltSNALAlv~~~~~~~~~~~~~~~-~~~p~w~~~~~r~ll~~~  221 (541)
T PLN02416        143 AYLSAALTNKNTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSMLPKSRRSTKGTKNRRL-LGFPKWVSKKDRRILQSD  221 (541)
T ss_pred             HHHHHHhcchhhHHhhhhhcCcchhhHHHHHHHHHHHHHHHHHHHhccccccccccCcCcc-CCCCCCCCccchhhhccC
Confidence            99999999999999999865321    11           999999876543222223333 3799  8888 99  542


Q ss_pred             C---cce--eEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEE
Q 040602          152 G---VQG--DVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMN  220 (277)
Q Consensus       152 ~---~~~--~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt  220 (277)
                      +   .++  .++|++||+|+|+||||||+++|+++.+|+|||||+|+      ||++|+||+|+|+      |+++|||+
T Consensus       222 ~~~~~~~~~~ivVa~dGsG~f~TIq~Ai~a~p~~~~~r~vI~Ik~GvY~E~V~i~~~k~~i~l~G~------g~~~TiIt  295 (541)
T PLN02416        222 GYDEYDPSEVLVVAADGTGNFSTITDAINFAPNNSNDRIIIYVREGVYEENVEIPIYKTNIVLIGD------GSDVTFIT  295 (541)
T ss_pred             CcccCCCCceEEECCCCCCCccCHHHHHHhhhhcCCceEEEEEeCceeEEEEecCCCCccEEEEec------CCCceEEe
Confidence            2   444  49999999999999999999999999999999999999      8899999999999      99999999


Q ss_pred             cccccccc
Q 040602          221 SMRFLLNL  228 (277)
Q Consensus       221 ~~~~~~~~  228 (277)
                      |++++.++
T Consensus       296 ~~~~~~~g  303 (541)
T PLN02416        296 GNRSVVDG  303 (541)
T ss_pred             CCCccCCC
Confidence            99998665

>PLN02708 Probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.1e-39  Score=326.38  Aligned_cols=194  Identities=22%  Similarity=0.258  Sum_probs=152.1

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchh
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT------IDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSD   89 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l------~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~D   89 (277)
                      ...|.+++++++.+++.++.+...  +.+      ...+..|++||+|||++|+|+|++++.++..         ...+|
T Consensus        73 ~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~ELlddavd~L~~Sl~~L~~---------~~~~D  143 (553)
T PLN02708         73 DPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLEVLSNSEHRISSTDIALPR---------GKIKD  143 (553)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------cchHH
Confidence            346889999999988887776652  222      1122689999999999999999999988852         35799


Q ss_pred             HHHHHHHHHhhhhhhhhccCCCc--hhH-------H-------hhhhhcCCCC---CCC-CCCCCCCCCCCC-----C--
Q 040602           90 LRTWLSAALINHETCIDGFDGTN--SIV-------K-------ELLTMVHPSP---NQW-SNGFSNSNSGGK-----G--  142 (277)
Q Consensus        90 vqTWLSAALTnq~TClDGF~e~~--~~~-------~-------naLa~v~~~~---~~~-~~~~~r~~~~g~-----P--  142 (277)
                      +|||||||||||+||+|||.+.+  +.+       .       |+|||+..+.   ... .+.+....++||     |  
T Consensus       144 vqTWLSAALTnq~TClDGF~~~~~~~~v~~~~~~L~nvs~LtSNSLAmv~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  223 (553)
T PLN02708        144 ARAWMSAALLYQYDCWSALKYVNDTSQVNDTMSFLDSLIGLTSNALSMMASYDIFGDDTGSWRPPKTERDGFWEPSGPGL  223 (553)
T ss_pred             HHHHHHHHhccHhHHHHHhhccCccchHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccCcccccccccccCCccc
Confidence            99999999999999999997542  111       1       9999998742   211 121111134577     6  


Q ss_pred             CCCC-CC--C--CCCcceeEEEecCCCcCcccHHHHHHHhhcC-CCceEEEEEeccc------ccccCccEEEEeccccC
Q 040602          143 CGGG-GK--S--INGVQGDVVVAADGTWNFTKIMDTVLATKDY-NMKRFVIYIKRGL------IPLPHWDRLFVAVFLHL  210 (277)
Q Consensus       143 v~~~-Rk--~--~~~~~~~vvVa~dGsg~F~TIq~Aida~P~~-~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~  210 (277)
                      ++.+ ||  +  +..++++++|++||+|+|+||||||+++|++ +.+|++||||+|+      |+++|+||+|+||    
T Consensus       224 ~~~~~~~ll~~~~~~~~~~~~Va~dGsg~f~TIq~Av~a~p~~~~~~r~vI~vk~GvY~E~V~i~~~k~~v~l~G~----  299 (553)
T PLN02708        224 GSDSGLGFKLGVPSGLTPDVTVCKDGNCCYKTVQEAVNAAPDNNGDRKFVIRIKEGVYEETVRVPLEKKNVVFLGD----  299 (553)
T ss_pred             cchhhhHHhhcCcccCCccEEECCCCCCCccCHHHHHHhhhhccCCccEEEEEeCceEEeeeeecCCCccEEEEec----
Confidence            4455 65  3  2358899999999999999999999999994 5889999999999      8899999999999    


Q ss_pred             CCCCCCeEEEcccccc
Q 040602          211 LSEMTETLMNSMRFLL  226 (277)
Q Consensus       211 ~~g~~~TiIt~~~~~~  226 (277)
                        |+++|||+|++++.
T Consensus       300 --g~~~TiIt~~~~~~  313 (553)
T PLN02708        300 --GMGKTVITGSLNVG  313 (553)
T ss_pred             --CCCceEEEecCccC
Confidence              99999999999864

>PLN02995 Probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.2e-39  Score=325.22  Aligned_cols=198  Identities=25%  Similarity=0.291  Sum_probs=149.9

Q ss_pred             ChHHHHHHHHHHHHHhhhchhh------hc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHHH
Q 040602           20 LPSLLWRSVMVGVVVNILTPFF------NQ-TIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRT   92 (277)
Q Consensus        20 ~p~~l~~~a~~~~~~~~~~~~~------~~-l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~DvqT   92 (277)
                      .++.+++.+++..+.++.+...      .. +..++++|++||+|||+|++|+|++|+++++...+.  ......+|+||
T Consensus        65 ~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~~~~~r~~~AL~DC~ELl~DAvD~L~~Sl~~l~~~~~~--~~~~~~~DvqT  142 (539)
T PLN02995         65 QISEFRVMLVEAAMDRAISARDELTNSGKNCTDFKKQAVLADCIDLYGDTIMQLNRTLQGVSPKAGA--AKRCTDFDAQT  142 (539)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--ccccchhhHHH
Confidence            5666666666655555555431      11 223348999999999999999999999999753210  01124589999


Q ss_pred             HHHHHHhhhhhhhhccCCCc--h----hH------H---hhhhhcCCCCCCCCCCCCCCCCCCCC--CCCC-CC--CCCC
Q 040602           93 WLSAALINHETCIDGFDGTN--S----IV------K---ELLTMVHPSPNQWSNGFSNSNSGGKG--CGGG-GK--SING  152 (277)
Q Consensus        93 WLSAALTnq~TClDGF~e~~--~----~~------~---naLa~v~~~~~~~~~~~~r~~~~g~P--v~~~-Rk--~~~~  152 (277)
                      |||||||||+||+|||++.+  .    .+      +   |+|+++..+.............++||  ++.. ||  +.  
T Consensus       143 WLSAALT~q~TC~DGF~~~~~~~~v~~~v~~~~~~~ltSNaLAi~~~l~~~~~~~~~~~~~~~~p~w~~~~~r~ll~~--  220 (539)
T PLN02995        143 WLSTALTNTETCRRGSSDLNVSDFITPIVSNTKISHLISNCLAVNGALLTAGNNGNTTANQKGFPTWVSRKDRRLLRL--  220 (539)
T ss_pred             HHHHHhcchhhhhhhhccccchhhhhhhhhhhhHHHHHHHHHHHhhhhcccccccccccccCCCCcccChhhhhhhhc--
Confidence            99999999999999997743  1    11      1   89999887543221100001346899  7777 88  43  


Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcC--CCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDY--NMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRF  224 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~--~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~  224 (277)
                      ++++++|++||+|+|+|||||||++|..  +.+|++||||+|+      ||++|+||+|+|+      |+++|||+|+++
T Consensus       221 ~~~~~~Va~dGsG~f~TIq~Ai~a~p~~~~~~~r~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~------g~~~TvIt~~~~  294 (539)
T PLN02995        221 VRANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGD------GMRSTIITGGRS  294 (539)
T ss_pred             CCCcEEECCCCCCCccCHHHHHHhcccccCCCceEEEEEeCCEeEEEEEecCCCCcEEEEEc------CCCCeEEEeCCc
Confidence            8889999999999999999999999964  7789999999999      8999999999999      999999999988


Q ss_pred             ccc
Q 040602          225 LLN  227 (277)
Q Consensus       225 ~~~  227 (277)
                      +.+
T Consensus       295 ~~~  297 (539)
T PLN02995        295 VKG  297 (539)
T ss_pred             cCC
Confidence            643

>PLN02488 probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.5e-39  Score=320.71  Aligned_cols=172  Identities=20%  Similarity=0.220  Sum_probs=137.7

Q ss_pred             cchHHHHHH----HHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHHHHHHHHHhhhhhhhhccCCCc--hhH-----
Q 040602           47 ASLSLFVDS----LDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTN--SIV-----  115 (277)
Q Consensus        47 ~~k~AL~DC----~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~--~~~-----  115 (277)
                      +++.|++||    +|||++++|+|++++.++....  .. .....+|++||||||||||+||+|||.+..  ..+     
T Consensus        67 ~~~~a~~dc~~~c~el~~~~~~~l~~s~~~~~~~~--~~-~~~~~~d~~twLSa~lt~q~TC~dg~~~~~~~~~~~~~l~  143 (509)
T PLN02488         67 NDMLGVKEDTNLFEEMMESAKDRMIRSVEELLGGE--SP-NLGSYENVHTWLSGVLTSYITCIDEIGEGAYKRRVEPELE  143 (509)
T ss_pred             hhhhhHHHhHHHHHHHHHHHHHHHHHHHHHhhccc--cc-ccCcHHHHHHHHHHhHhchhhHhccccCcchHHHHHHHHH
Confidence            449999999    9999999999999999996321  11 123458999999999999999999995431  111     


Q ss_pred             ------HhhhhhcCCCCCCCCCCCCCCCCCCCC--CCCC-CC--CCC--Cc--ceeEEEecCCCcCcccHHHHHHHhhcC
Q 040602          116 ------KELLTMVHPSPNQWSNGFSNSNSGGKG--CGGG-GK--SIN--GV--QGDVVVAADGTWNFTKIMDTVLATKDY  180 (277)
Q Consensus       116 ------~naLa~v~~~~~~~~~~~~r~~~~g~P--v~~~-Rk--~~~--~~--~~~vvVa~dGsg~F~TIq~Aida~P~~  180 (277)
                            .|+|+|+.......... .....++||  ++.. ||  |..  .+  +++++|++||+|+|+||||||+++|++
T Consensus       144 ~~~~~~sn~La~~~~~~~~~~~~-~~~~~~~~P~W~~~~dR~lL~~~~~~~~~~~~vvVa~dGsG~f~TIq~AI~a~P~~  222 (509)
T PLN02488        144 DLISRARVALAIFISISPRDDTE-LKSVVPNGPSWLSNVDKKYLYLNPEVLKKIADVVVAKDGSGKYNTVNAAIAAAPEH  222 (509)
T ss_pred             HHHHHHHHHHHhhccccccccch-hhcccCCCCCCCCccchhhhhcCcccccccccEEECCCCCCCccCHHHHHHhchhc
Confidence                  18999998654321110 001235799  8888 98  532  24  589999999999999999999999999


Q ss_pred             CCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccccc
Q 040602          181 NMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNL  228 (277)
Q Consensus       181 ~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~~~  228 (277)
                      +.+|++||||+|+      |+++|+||||+||      |+++|||+|++++.++
T Consensus       223 ~~~r~vI~Ik~GvY~E~V~I~~~k~nItliGd------g~~~TiIt~n~~~~~g  270 (509)
T PLN02488        223 SRKRFVIYIKTGVYDEIVRIGSTKPNLTLIGD------GQDSTIITGNLSASNG  270 (509)
T ss_pred             CCCcEEEEEeCCeeEEEEEecCCCccEEEEec------CCCceEEEEcccccCC
Confidence            9999999999999      8999999999999      9999999999998654

>PLN02170 probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=4.4e-39  Score=319.35  Aligned_cols=192  Identities=23%  Similarity=0.256  Sum_probs=149.2

Q ss_pred             cChHHHHHHHHHHHHHhhhchhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHHHHHHHHH
Q 040602           19 SLPSLLWRSVMVGVVVNILTPFFNQTIDASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAAL   98 (277)
Q Consensus        19 ~~p~~l~~~a~~~~~~~~~~~~~~~l~~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~DvqTWLSAAL   98 (277)
                      +.|+.+++..++..+......+.    ....+|++||+|||++++|+|+++++...        .....+|+||||||||
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Al~DC~ELlddavd~L~~S~~~~~--------~~~~~~DvqTWLSAAL  140 (529)
T PLN02170         73 SMNHALFARSLAFNLTLSHRTVQ----THTFDPVNDCLELLDDTLDMLSRIVVIKH--------ADHDEEDVHTWLSAAL  140 (529)
T ss_pred             cChHHHHHhhhHhhhhhhhhhcc----cchhHHHHHHHHHHHHHHHHHHHHHHhhc--------cccchhHHHHHHHHHH
Confidence            44777777777655553333332    12278999999999999999999995432        1356899999999999


Q ss_pred             hhhhhhhhccCCCc--hh----HH-----------hhhhhcCCCCCCCC--CCCCCC--CCCCCC--CCCC-CC--CC--
Q 040602           99 INHETCIDGFDGTN--SI----VK-----------ELLTMVHPSPNQWS--NGFSNS--NSGGKG--CGGG-GK--SI--  150 (277)
Q Consensus        99 Tnq~TClDGF~e~~--~~----~~-----------naLa~v~~~~~~~~--~~~~r~--~~~g~P--v~~~-Rk--~~--  150 (277)
                      |||+||+|||++.+  ..    ++           |+|+++........  ....|+  .+++||  ++.+ ||  +.  
T Consensus       141 Tnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~~~~~~~~~~~~l~~~~~~p~w~~~~~r~ll~~~~  220 (529)
T PLN02170        141 TNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKSKHSSSSKGGRKLLSEQDFPTWVSSSERKLLEAPV  220 (529)
T ss_pred             hchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCccccCCCCCCcCHhHHHHhhCcc
Confidence            99999999998653  11    11           99999987553322  112333  245699  7777 88  43  


Q ss_pred             CCcceeEEEecCCCcCcccHHHHHHHh-hcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccc
Q 040602          151 NGVQGDVVVAADGTWNFTKIMDTVLAT-KDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMR  223 (277)
Q Consensus       151 ~~~~~~vvVa~dGsg~F~TIq~Aida~-P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~  223 (277)
                      ...+++++|++||+|+|+||||||+++ |+++.+|++||||+|+      ||++|+||+|+|+      |+++|||+|++
T Consensus       221 ~~~~~~~vVa~dGsG~f~TIq~AI~a~~~~~~~~r~vI~Ik~GvY~E~V~I~~~k~nItl~G~------g~~~TiIt~~~  294 (529)
T PLN02170        221 EELKVHAVVAADGSGTHKTIGEALLSTSLESGGGRTVIYLKAGTYHENLNIPTKQKNVMLVGD------GKGKTVIVGSR  294 (529)
T ss_pred             ccCcccEEEcCCCCCchhhHHHHHHhcccccCCceEEEEEeCCeeEEEEecCCCCceEEEEEc------CCCCeEEEeCC
Confidence            357899999999999999999999986 4678889999999999      8999999999999      99999999998


Q ss_pred             ccccc
Q 040602          224 FLLNL  228 (277)
Q Consensus       224 ~~~~~  228 (277)
                      +..++
T Consensus       295 ~~~~g  299 (529)
T PLN02170        295 SNRGG  299 (529)
T ss_pred             cCCCC
Confidence            87553

>PLN02916 pectinesterase family protein

Probab=100.00  E-value=1.9e-38  Score=313.48  Aligned_cols=165  Identities=27%  Similarity=0.322  Sum_probs=134.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHHHHHHHHHhhhhhhhhccCCCch----hH-------Hh
Q 040602           49 LSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS----IV-------KE  117 (277)
Q Consensus        49 k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~~----~~-------~n  117 (277)
                      .+|++||+|||++++|+|++++.++..         ...+|+|||||||||||+||+|||++.+.    .+       .|
T Consensus        62 ~~Al~DC~ELl~dSvd~L~~Sl~~~~~---------~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~v~nvt~ltSN  132 (502)
T PLN02916         62 GEALSDCEKLYDESEARLSKLLVSHEN---------FTVEDARTWLSGVLANHHTCLDGLEQKGQGHKPMAHNVTFVLSE  132 (502)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcc---------CchHHHHHHHHHHHhCHhHHHHhhhhccccchHHHHHHHHHHHH
Confidence            799999999999999999999987642         23699999999999999999999975421    11       19


Q ss_pred             hhhhcCCCCCCCCC-----CCCCC----CCCCCC--CCCC-CC--CC---CCcceeEEEecCCCcCcccHHHHHHHhhc-
Q 040602          118 LLTMVHPSPNQWSN-----GFSNS----NSGGKG--CGGG-GK--SI---NGVQGDVVVAADGTWNFTKIMDTVLATKD-  179 (277)
Q Consensus       118 aLa~v~~~~~~~~~-----~~~r~----~~~g~P--v~~~-Rk--~~---~~~~~~vvVa~dGsg~F~TIq~Aida~P~-  179 (277)
                      +|+++.......+.     ++.|+    ..++||  ++.. ||  +.   ..++++++|++||+|+|+|||+||+++|+ 
T Consensus       133 aLAlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~rr~l~~~~~~~~~~~~vVa~dGsG~f~TIq~AI~a~P~~  212 (502)
T PLN02916        133 ALALYKKSRGHMKKGLPRRPKHRPNHGPGREVHPPSRPNQNGGMLVSWNPTTSRADFVVARDGSGTHRTINQALAALSRM  212 (502)
T ss_pred             HHHHhhhhhhhhhcccccCccccccccccccCCCcccCccccchhhccCCcCCcccEEECCCCCCCccCHHHHHHhcccc
Confidence            99999875532211     11232    124788  6666 77  32   34788999999999999999999999996 


Q ss_pred             --CCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccccc
Q 040602          180 --YNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLNL  228 (277)
Q Consensus       180 --~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~~~  228 (277)
                        ++.+|++||||+|+      ||++|+||+|+|+      |+++|||+|++++.++
T Consensus       213 ~~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~------g~~~TiIt~~~~~~~g  263 (502)
T PLN02916        213 GKSRTNRVIIYVKAGVYNEKVEIDRHMKNVMFVGD------GMDKTIITNNRNVPDG  263 (502)
T ss_pred             cCCCCceEEEEEeCceeeEEEEecCCCceEEEEec------CCCCcEEEeCCccCCC
Confidence              56789999999999      8999999999999      9999999999987655

>PLN02698 Probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.3e-32  Score=272.72  Aligned_cols=172  Identities=17%  Similarity=0.154  Sum_probs=133.4

Q ss_pred             ChHHHHHHHHHHHHHhhhchhh--hcc------c--ccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchh
Q 040602           20 LPSLLWRSVMVGVVVNILTPFF--NQT------I--DASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSD   89 (277)
Q Consensus        20 ~p~~l~~~a~~~~~~~~~~~~~--~~l------~--~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~D   89 (277)
                      .|.+++++++.+++.++.+...  ..+      .  .+.+.|++||+|||++++++|++++.+|....      ....+|
T Consensus        48 ~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~DC~Ell~dsvd~L~~Sl~~l~~~~------~~~~~D  121 (497)
T PLN02698         48 DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDSCERLMKMSLKRLRQSLLALKGSS------RKNKHD  121 (497)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------ccchhH
Confidence            7999999999988887776652  111      1  22279999999999999999999999997531      245799


Q ss_pred             HHHHHHHHHhhhhhhhhccCCC----ch----hHH-----------hhhhhcCCCCCCCCCC-CCCC--CCCCCC--CCC
Q 040602           90 LRTWLSAALINHETCIDGFDGT----NS----IVK-----------ELLTMVHPSPNQWSNG-FSNS--NSGGKG--CGG  145 (277)
Q Consensus        90 vqTWLSAALTnq~TClDGF~e~----~~----~~~-----------naLa~v~~~~~~~~~~-~~r~--~~~g~P--v~~  145 (277)
                      +|||||||||||+||+|||.+.    ++    .++           |+|+|++.+....... ..|+  ..++||  ++.
T Consensus       122 v~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNALAmv~~l~~~~~~~~~~~~~~~~~~~p~w~~~  201 (497)
T PLN02698        122 IQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSLALVNRITPNPKPKTKSRGLSEEQVFPRWVSA  201 (497)
T ss_pred             HHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCCCCCcccch
Confidence            9999999999999999999531    11    111           9999998865422211 1233  234899  888


Q ss_pred             C-CC--CCCCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEecccccccCccEEEEeccccCCCCCCCeEEEcc
Q 040602          146 G-GK--SINGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGLIPLPHWDRLFVAVFLHLLSEMTETLMNSM  222 (277)
Q Consensus       146 ~-Rk--~~~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~GvI~~~k~nI~l~Gd~~~~~~g~~~TiIt~~  222 (277)
                      . ||  |.+.++++++|++||+|+|+|||||||++|+++                       |        +++|||||+
T Consensus       202 ~~r~ll~~~~~~~~~~Va~dGsG~f~tiq~Ai~a~p~~~-----------------------g--------~~~TiIt~~  250 (497)
T PLN02698        202 GDRKLLQGRTIKANAVVAKDGTGNYETVSEAITAAHGNH-----------------------G--------KYSTVIVGD  250 (497)
T ss_pred             hhHhhhccCCCCceEEEcCCCCCCcccHHHHHHhhhhcC-----------------------C--------CCceEEEeC
Confidence            8 99  666789999999999999999999999999975                       4        567999999


Q ss_pred             cccccc
Q 040602          223 RFLLNL  228 (277)
Q Consensus       223 ~~~~~~  228 (277)
                      +++.++
T Consensus       251 ~~~~~g  256 (497)
T PLN02698        251 DSVTGG  256 (497)
T ss_pred             CcccCC
Confidence            998654

>PLN02176 putative pectinesterase

Probab=99.69  E-value=3.5e-17  Score=156.10  Aligned_cols=87  Identities=11%  Similarity=0.187  Sum_probs=71.1

Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      ..++++|++||+|+|+|||+|||++|+++.+|++|+||+|+      ||+.|+||+|+|+      |+++|||++++...
T Consensus        37 ~~~~i~Va~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~GvY~EkV~Ip~~k~~vtl~G~------g~~~TiIt~~~~~~  110 (340)
T PLN02176         37 IAKTIIVNPNDARYFKTVQSAIDSIPLQNQNWIRILIQNGIYREKVTIPKEKGYIYMQGK------GIEKTIIAYGDHQA  110 (340)
T ss_pred             cCceEEECCCCCCCccCHHHHHhhchhcCCceEEEEECCcEEEEEEEECCCCccEEEEEc------CCCceEEEEeCCcc
Confidence            56799999999999999999999999999999999999999      8999999999999      99999999987652


Q ss_pred             cccccccccccCCchhhhhh
Q 040602          227 NLHYKSVFMKSLPSLLWRSV  246 (277)
Q Consensus       227 ~~~~~s~~~~~~~~~~~~~~  246 (277)
                      . .....+.-.+++++++..
T Consensus       111 t-~~saT~~v~a~~F~a~nl  129 (340)
T PLN02176        111 T-DTSATFTSYASNIIITGI  129 (340)
T ss_pred             c-ccceEEEEECCCEEEEee
Confidence            2 112334444555544443

>PLN02671 pectinesterase

Probab=99.67  E-value=9.5e-17  Score=154.03  Aligned_cols=72  Identities=22%  Similarity=0.244  Sum_probs=64.6

Q ss_pred             CcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          152 GVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       152 ~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      ..+..++|++||+|+|+|||+|||++|.++.+|++|+||+|+      ||+.|+||+|+|++.    .+++|||+|++++
T Consensus        56 ~~~~~i~Va~dGsGdf~TIQ~AIdavP~~~~~~~~I~Ik~GvY~EkV~I~~~k~~Itl~G~g~----~~~~TvIt~~~~a  131 (359)
T PLN02671         56 NVSRVIVVDKNGGGDSLTVQGAVDMVPDYNSQRVKIYILPGIYREKVLVPKSKPYISFIGNES----RAGDTVISWNDKA  131 (359)
T ss_pred             CCceeEEECCCCCCCccCHHHHHHhchhcCCccEEEEEeCceEEEEEEECCCCCeEEEEecCC----CCCCEEEEcCCcc
Confidence            467789999999999999999999999999999999999999      888999999999821    1479999999987


Q ss_pred             cc
Q 040602          226 LN  227 (277)
Q Consensus       226 ~~  227 (277)
                      .+
T Consensus       132 ~~  133 (359)
T PLN02671        132 SD  133 (359)
T ss_pred             cc
Confidence            44

>PLN02304 probable pectinesterase

Probab=99.66  E-value=1.5e-16  Score=153.48  Aligned_cols=67  Identities=24%  Similarity=0.332  Sum_probs=63.5

Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      ...+++|++||+|+|+|||+|||++|+++.+|++|+||+|+      ||+.|+||+|+|+      |+++|||+|++.+
T Consensus        73 ~~~~i~Va~dGsGdf~TIQ~AIdavP~~~~~r~vI~Ik~GvY~EkV~Ip~~K~~Itl~G~------g~~~TiIt~~~~a  145 (379)
T PLN02304         73 TTSILCVDPNGCCNFTTVQSAVDAVGNFSQKRNVIWINSGIYYEKVTVPKTKPNITFQGQ------GFDSTAIAWNDTA  145 (379)
T ss_pred             cceEEEECCCCCCCccCHHHHHhhCcccCCCcEEEEEeCeEeEEEEEECCCCCcEEEEec------CCCCcEEEccCcc
Confidence            45789999999999999999999999999999999999999      8999999999999      9999999999876

>PLN02634 probable pectinesterase

Probab=99.66  E-value=1.9e-16  Score=151.85  Aligned_cols=68  Identities=19%  Similarity=0.162  Sum_probs=64.1

Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      ...+++|++||+|+|+|||+|||++|+++.+|++|+||+|+      ||+.|+||+|+|+      |+++|||+|++.+.
T Consensus        54 ~~~~i~Va~dGsGdf~TIQaAIda~P~~~~~r~vI~Ik~GvY~EkV~Ip~~k~~ItL~G~------g~~~TiIt~~~~a~  127 (359)
T PLN02634         54 GHKVITVDANGHGDFRSVQDAVDSVPKNNTMSVTIKINAGFYREKVVVPATKPYITFQGA------GRDVTAIEWHDRAS  127 (359)
T ss_pred             CCccEEECCCCCCCccCHHHHHhhCcccCCccEEEEEeCceEEEEEEEcCCCCeEEEEec------CCCceEEEeccccc
Confidence            55789999999999999999999999999999999999999      8899999999999      89999999998764

>PLN02497 probable pectinesterase

Probab=99.64  E-value=2.3e-16  Score=150.06  Aligned_cols=85  Identities=24%  Similarity=0.219  Sum_probs=69.6

Q ss_pred             ceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccccccc
Q 040602          154 QGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLN  227 (277)
Q Consensus       154 ~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~~  227 (277)
                      ..+++|++||+|+|+|||+|||++|.++.+|++|+||+|+      ||+.|+||+|+|+      |+++|+|+|++.+-.
T Consensus        31 ~~~i~Va~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~G~Y~EkV~Ip~~k~~itl~G~------g~~~tiIt~~~~~~t  104 (331)
T PLN02497         31 QQQVFVDQSGHGNFTTIQSAIDSVPSNNKHWFCINVKAGLYREKVKIPYDKPFIVLVGA------GKRRTRIEWDDHDST  104 (331)
T ss_pred             ceEEEECCCCCCCccCHHHHHhhccccCCceEEEEEeCcEEEEEEEecCCCCcEEEEec------CCCCceEEEeccccc
Confidence            3589999999999999999999999999999999999999      8889999999999      999999999887522


Q ss_pred             ccccccccccCCchhhhh
Q 040602          228 LHYKSVFMKSLPSLLWRS  245 (277)
Q Consensus       228 ~~~~s~~~~~~~~~~~~~  245 (277)
                       ....++.-.++++++..
T Consensus       105 -~~SaT~~v~a~~f~a~n  121 (331)
T PLN02497        105 -AQSPTFSTLADNTVVKS  121 (331)
T ss_pred             -cCceEEEEecCCeEEEc
Confidence             12233444444444433

>PLN02665 pectinesterase family protein

Probab=99.64  E-value=2.6e-16  Score=151.48  Aligned_cols=65  Identities=18%  Similarity=0.096  Sum_probs=62.3

Q ss_pred             eeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          155 GDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       155 ~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      ..++|++||+|+|+|||+|||++|.++.+|++|+||+|+      ||+.|+||+|+|+      |+++|+|+|++.+
T Consensus        68 ~~i~V~~dG~Gdf~TIq~AIdaiP~~~~~r~vI~Ik~GvY~EkV~Ip~~kp~Itl~G~------~~~~tiIt~~~~a  138 (366)
T PLN02665         68 RIIKVRKDGSGDFKTITDAIKSIPAGNTQRVIIDIGPGEYNEKITIDRSKPFVTLYGS------PGAMPTLTFDGTA  138 (366)
T ss_pred             eEEEEcCCCCCCccCHHHHHhhCcccCCceEEEEEeCcEEEEEEEecCCCCEEEEEec------CCCCCEEEECCcc
Confidence            689999999999999999999999999999999999999      8999999999999      8999999999775

>PLN02773 pectinesterase

Probab=99.64  E-value=3e-16  Score=148.62  Aligned_cols=67  Identities=19%  Similarity=0.190  Sum_probs=62.8

Q ss_pred             ceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          154 QGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       154 ~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      +..++|++||+|+|+|||+|||++|.++.+|++|+||+|+      ||+.|+||+|+|+      |+++|||+|++.+.
T Consensus         4 ~~~i~Va~dGsGdf~TIq~Aida~P~~~~~~~~I~Ik~G~Y~E~V~I~~~k~~itl~G~------~~~~TiI~~~~~a~   76 (317)
T PLN02773          4 RRVLRVAQDGSGDYCTVQDAIDAVPLCNRCRTVIRVAPGVYRQPVYVPKTKNLITLAGL------SPEATVLTWNNTAT   76 (317)
T ss_pred             ceEEEECCCCCCCccCHHHHHhhchhcCCceEEEEEeCceEEEEEEECcCCccEEEEeC------CCCceEEEccCccc
Confidence            3579999999999999999999999999999999999999      8889999999999      89999999998763

>PLN02432 putative pectinesterase

Probab=99.63  E-value=3.8e-16  Score=146.52  Aligned_cols=67  Identities=19%  Similarity=0.190  Sum_probs=63.1

Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      .+..++|++||+|+|+|||+|||++|.++.+|++|+||+|+      ||+.|+||+|+|+      |+++|||+|++..
T Consensus         9 ~~~~~~Va~~Gsg~f~TIq~Aida~p~~~~~~~~I~I~~G~Y~E~V~ip~~k~~itl~G~------~~~~TvI~~~~~~   81 (293)
T PLN02432          9 TAILIRVDQSGKGDFRKIQDAIDAVPSNNSQLVFIWVKPGIYREKVVVPADKPFITLSGT------QASNTIITWNDGG   81 (293)
T ss_pred             ceEEEEECCCCCCCccCHHHHHhhccccCCceEEEEEeCceeEEEEEEeccCceEEEEEc------CCCCeEEEecCCc
Confidence            45789999999999999999999999999999999999999      8899999999999      8999999999775

>PLN02682 pectinesterase family protein

Probab=99.63  E-value=4.2e-16  Score=150.06  Aligned_cols=67  Identities=19%  Similarity=0.137  Sum_probs=62.2

Q ss_pred             ceeEEEec-CCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          154 QGDVVVAA-DGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       154 ~~~vvVa~-dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      ..+++|++ ||+|+|+|||+|||++|.++.+|++|+||+|+      ||+.|+||+|+|+      |+++|||+|++.+.
T Consensus        68 ~~~i~V~~~~gsGdf~TIQ~AIdavP~~~~~r~vI~Ik~G~Y~EkV~Ip~~k~~Itl~G~------g~~~TiIt~~~~a~  141 (369)
T PLN02682         68 SYTIVVDKKPAAGDFTTIQAAIDSLPVINLVRVVIKVNAGTYREKVNIPPLKAYITLEGA------GADKTIIQWGDTAD  141 (369)
T ss_pred             CeEEEEeCCCCCCCccCHHHHHhhccccCCceEEEEEeCceeeEEEEEeccCceEEEEec------CCCccEEEeccccC
Confidence            45799999 69999999999999999999999999999999      8889999999999      99999999988763

>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3

Probab=99.61  E-value=8.9e-16  Score=144.15  Aligned_cols=66  Identities=30%  Similarity=0.450  Sum_probs=53.6

Q ss_pred             eEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccccccc
Q 040602          156 DVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLLN  227 (277)
Q Consensus       156 ~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~~  227 (277)
                      +|+|++||+|+|+|||+|||++|+++..|++|+||+|+      |++.|++|+|+|+      |+++|||+++....+
T Consensus         1 ~i~Va~dG~gdf~TIq~Aida~p~~~~~~~~I~I~~G~Y~E~V~i~~~k~~v~l~G~------~~~~tiI~~~~~~~~   72 (298)
T PF01095_consen    1 DIVVAQDGSGDFTTIQAAIDAAPDNNTSRYTIFIKPGTYREKVTIPRSKPNVTLIGE------GRDKTIITGNDNAAD   72 (298)
T ss_dssp             SEEE-TTSTSSBSSHHHHHHHS-SSSSS-EEEEE-SEEEE--EEE-STSTTEEEEES-------TTTEEEEE---TTT
T ss_pred             CeEECCCCCCCccCHHHHHHhchhcCCceEEEEEeCeeEccccEeccccceEEEEec------CCCceEEEEeccccc
Confidence            68999999999999999999999999999999999999      8888999999999      899999999766544

1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....

>PLN02480 Probable pectinesterase

Probab=99.61  E-value=1e-15  Score=146.33  Aligned_cols=85  Identities=14%  Similarity=0.153  Sum_probs=69.9

Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      ....++|++||+|+|+|||+|||++|.++.+|++|+||+|+      |++.||||+|+|+      |+++|||+|+.++.
T Consensus        46 ~~~~~~Va~~G~g~f~TIQ~AIdaap~~~~~~~~I~Ik~GvY~E~V~I~~~kp~ItL~G~------g~~~TvI~~~~~~~  119 (343)
T PLN02480         46 TNRTIIVDINGKGDFTSVQSAIDAVPVGNSEWIIVHLRKGVYREKVHIPENKPFIFMRGN------GKGRTSIVWSQSSS  119 (343)
T ss_pred             cccEEEECCCCCCCcccHHHHHhhCccCCCceEEEEEcCcEEEEEEEECCCCceEEEEec------CCCCeEEEcccccc
Confidence            55789999999999999999999999999899999999999      8888999999999      89999999998764


Q ss_pred             cccccccccccCCchhh
Q 040602          227 NLHYKSVFMKSLPSLLW  243 (277)
Q Consensus       227 ~~~~~s~~~~~~~~~~~  243 (277)
                      +.....++.-.++++++
T Consensus       120 ~~~~saTvtV~a~~f~a  136 (343)
T PLN02480        120 DNAASATFTVEAPHFVA  136 (343)
T ss_pred             CCCCceEEEEECCCEEE
Confidence            33233333334444433

>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor

Probab=99.52  E-value=4.5e-14  Score=116.77  Aligned_cols=86  Identities=24%  Similarity=0.346  Sum_probs=68.1

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc---ccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT---IDA--SLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l---~~~--~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      ..+|..+++.++......+.....  +.+   ..+  .+.|++||.++|++++++|++++.++..         ...+|+
T Consensus        32 ~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~---------~~~~d~  102 (148)
T smart00856       32 ATDPKDLAKIAIKVALSQATKTLSFISSLLKKTKDPRLKAALKDCLELYDDAVDSLEKALEELKS---------GDYDDV  102 (148)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cchhHH
Confidence            458899999988866665444442  112   122  2899999999999999999999999863         247999


Q ss_pred             HHHHHHHHhhhhhhhhccCCCc
Q 040602           91 RTWLSAALINHETCIDGFDGTN  112 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e~~  112 (277)
                      ++|||+|+||++||+|||.+.+
T Consensus       103 ~~~lsaa~t~~~tC~d~f~~~~  124 (148)
T smart00856      103 ATWLSAALTDQDTCLDGFEEND  124 (148)
T ss_pred             HHHHHHHhcCcchHHhHhccCC
Confidence            9999999999999999998743

This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.

>PRK10531 acyl-CoA thioesterase; Provisional

Probab=99.50  E-value=3.5e-14  Score=138.70  Aligned_cols=64  Identities=19%  Similarity=0.080  Sum_probs=57.0

Q ss_pred             eeEEE--ecCCCcCcccHHHHHHHhh-cCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcc
Q 040602          155 GDVVV--AADGTWNFTKIMDTVLATK-DYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSM  222 (277)
Q Consensus       155 ~~vvV--a~dGsg~F~TIq~Aida~P-~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~  222 (277)
                      ++++|  ++||+|+|+|||+|||++| .++.+|++|+||+|+      ||+.|+||+|+|+|.    ++++|||+|+
T Consensus        80 ~~~vV~~a~dGsGdf~TIQaAIdAa~~~~~~~r~~I~Ik~GvY~EkV~Ip~~kp~ItL~G~G~----~~~~TvIt~~  152 (422)
T PRK10531         80 PDFVVGPAGTQGVTHTTVQAAVDAAIAKRTNKRQYIAVMPGTYQGTVYVPAAAPPITLYGTGE----KPIDVKIGLA  152 (422)
T ss_pred             CcEEEecCCCCCCCccCHHHHHhhccccCCCceEEEEEeCceeEEEEEeCCCCceEEEEecCC----CCCceEEEec
Confidence            79999  8899999999999999875 567789999999999      899999999999832    3678999998

>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues

Probab=99.35  E-value=3e-12  Score=105.68  Aligned_cols=84  Identities=30%  Similarity=0.365  Sum_probs=66.0

Q ss_pred             hhcChHHHHHHHHHHHHHhhhchhh--hcc----cccc--hHHHHHHHHHHHHHHHHHHHHHHHH--hcccccCCCCCCC
Q 040602           17 MKSLPSLLWRSVMVGVVVNILTPFF--NQT----IDAS--LSLFVDSLDLLDFSTDELSCLYTFV--FNKTRKLNGSGDL   86 (277)
Q Consensus        17 ~~~~p~~l~~~a~~~~~~~~~~~~~--~~l----~~~~--k~AL~DC~eLlddSid~L~~Sl~~L--~~~~~~~~~~~~~   86 (277)
                      ...+|..+++.++.....++.....  .++    .+++  +.+++||.++|++++++|++++.++  ..         ..
T Consensus        32 ~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~y~~a~~~l~~a~~~l~~~~---------~~  102 (152)
T PF04043_consen   32 SAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQELYDDAVDSLQRALEALNSKN---------GD  102 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH---------T-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHHHHHHHHHHHHHHHhhhccc---------ch
Confidence            4568888999888866665555542  222    2233  8999999999999999999999999  42         35


Q ss_pred             chhHHHHHHHHHhhhhhhhhccC
Q 040602           87 SSDLRTWLSAALINHETCIDGFD  109 (277)
Q Consensus        87 ~~DvqTWLSAALTnq~TClDGF~  109 (277)
                      +.|+++|||+|++|++||.|||.
T Consensus       103 ~~~~~~~lsaa~~~~~tC~~~f~  125 (152)
T PF04043_consen  103 YDDARTWLSAALTNQDTCEDGFE  125 (152)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhc
Confidence            88999999999999999999994

This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....

>TIGR01614 PME_inhib pectinesterase inhibitor domain

Probab=99.33  E-value=3.6e-12  Score=109.17  Aligned_cols=85  Identities=24%  Similarity=0.233  Sum_probs=66.4

Q ss_pred             cChHHHHHHHHHHHHHhhhchhh--hcc----c-ccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhHH
Q 040602           19 SLPSLLWRSVMVGVVVNILTPFF--NQT----I-DASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLR   91 (277)
Q Consensus        19 ~~p~~l~~~a~~~~~~~~~~~~~--~~l----~-~~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dvq   91 (277)
                      .+|..+++.++.....+......  ..+    + ...+.|++||.++|++++++|++++.+++.         ...+|++
T Consensus        58 ad~~~la~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~---------~~~~d~~  128 (178)
T TIGR01614        58 ADLQGLANISVSAALSNASDTLDHISKLLLTKGDPRDKSALEDCVELYSDAVDALDKALASLKS---------KDYSDAE  128 (178)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cchhHHH
Confidence            37888888888755544444331  112    1 122899999999999999999999999863         3479999


Q ss_pred             HHHHHHHhhhhhhhhccCCCc
Q 040602           92 TWLSAALINHETCIDGFDGTN  112 (277)
Q Consensus        92 TWLSAALTnq~TClDGF~e~~  112 (277)
                      +|||+|+||++||.|||.+.+
T Consensus       129 ~~ls~a~~~~~tC~d~f~~~~  149 (178)
T TIGR01614       129 TWLSSALTDPSTCEDGFEELG  149 (178)
T ss_pred             HHHHHHHcccchHHHHhccCC
Confidence            999999999999999998654

This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.

>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]

Probab=98.61  E-value=7.8e-08  Score=91.63  Aligned_cols=66  Identities=23%  Similarity=0.160  Sum_probs=54.1

Q ss_pred             ceeEEEecCCCc-CcccHHHHHHHhhcCCC-ceEEEEEeccc------ccccCccEEEEeccccCCCCCC--CeEEEccc
Q 040602          154 QGDVVVAADGTW-NFTKIMDTVLATKDYNM-KRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMT--ETLMNSMR  223 (277)
Q Consensus       154 ~~~vvVa~dGsg-~F~TIq~Aida~P~~~~-~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~--~TiIt~~~  223 (277)
                      ...++|++.-.| +|+|||+|||+++..++ +|++|.||+|+      ||+.-+-|+|+|+      +.+  .|+|..|.
T Consensus        80 ~~~avvsa~a~G~~f~TIQaAvdaA~~~~~~kr~yI~vk~GvY~e~v~Vp~~~~~ITLyGe------d~~~~~tvIg~n~  153 (405)
T COG4677          80 PDFAVVSAGAQGVTFTTIQAAVDAAIIKRTNKRQYIAVKAGVYQETVYVPAAPGGITLYGE------DEKPIDTVIGLNL  153 (405)
T ss_pred             cceeEEecCCCccchHHHHHHHhhhcccCCCceEEEEEccceeceeEEecCCCCceeEEec------CCCCcceEEEEec
Confidence            356778776667 89999999999988765 89999999999      5554444999999      666  89999887


Q ss_pred             cc
Q 040602          224 FL  225 (277)
Q Consensus       224 ~~  225 (277)
                      .+
T Consensus       154 aa  155 (405)
T COG4677         154 AA  155 (405)
T ss_pred             CC
Confidence            64

>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein

Probab=94.72  E-value=0.032  Score=53.07  Aligned_cols=45  Identities=16%  Similarity=0.240  Sum_probs=37.7

Q ss_pred             HHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccc
Q 040602          170 IMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRF  224 (277)
Q Consensus       170 Iq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~  224 (277)
                      ||+||++++.+.    +|+|.+|+      |...|++|+|.|.      |+++|||.+...
T Consensus         1 iQ~Ai~~A~~GD----tI~l~~G~Y~~~~~l~I~~~~Iti~G~------g~~~tvid~~~~   51 (314)
T TIGR03805         1 LQEALIAAQPGD----TIVLPEGVFQFDRTLSLDADGVTIRGA------GMDETILDFSGQ   51 (314)
T ss_pred             CHhHHhhCCCCC----EEEECCCEEEcceeEEEeCCCeEEEec------CCCccEEecccC
Confidence            699999998854    79999999      5666789999999      888899986543

Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.

>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans

Probab=88.46  E-value=0.45  Score=44.26  Aligned_cols=37  Identities=16%  Similarity=0.242  Sum_probs=30.3

Q ss_pred             CcccHHHHHHHhhcCCCceEEEEEeccc--------ccc-cCccEEEEec
Q 040602          166 NFTKIMDTVLATKDYNMKRFVIYIKRGL--------IPL-PHWDRLFVAV  206 (277)
Q Consensus       166 ~F~TIq~Aida~P~~~~~~~vI~Ik~Gv--------I~~-~k~nI~l~Gd  206 (277)
                      -|+||+.|++.++.+.    +|+|.+|+        .|. -|+.|+|+|+
T Consensus        14 P~~Ti~~A~~~a~~g~----~i~l~~GtY~~~~ge~fPi~i~~gVtl~G~   59 (246)
T PF07602_consen   14 PFKTITKALQAAQPGD----TIQLAPGTYSEATGETFPIIIKPGVTLIGN   59 (246)
T ss_pred             CHHHHHHHHHhCCCCC----EEEECCceeccccCCcccEEecCCeEEeec
Confidence            3999999999988764    89999999        221 2689999997

Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).

>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A

Probab=82.02  E-value=2.5  Score=36.32  Aligned_cols=49  Identities=14%  Similarity=0.046  Sum_probs=33.3

Q ss_pred             CcccHHHHHHHhhcCCCceEEEEEeccc--ccc---cCccEEEEeccccCCCCCCCeEEEcc
Q 040602          166 NFTKIMDTVLATKDYNMKRFVIYIKRGL--IPL---PHWDRLFVAVFLHLLSEMTETLMNSM  222 (277)
Q Consensus       166 ~F~TIq~Aida~P~~~~~~~vI~Ik~Gv--I~~---~k~nI~l~Gd~~~~~~g~~~TiIt~~  222 (277)
                      +=.-||+||+++-  ....-+||+-+|.  |..   -+++++|.|+      |...|++...
T Consensus        17 dt~Aiq~Ai~~~~--~~~g~~v~~P~G~Y~i~~~l~~~s~v~l~G~------g~~~~~~~~~   70 (225)
T PF12708_consen   17 DTAAIQAAIDAAA--AAGGGVVYFPPGTYRISGTLIIPSNVTLRGA------GGNSTILFLS   70 (225)
T ss_dssp             -HHHHHHHHHHHC--STTSEEEEE-SEEEEESS-EEE-TTEEEEES------STTTEEEEEC
T ss_pred             HHHHHHHhhhhcc--cCCCeEEEEcCcEEEEeCCeEcCCCeEEEcc------CCCeeEEEec
Confidence            3567899994432  2345689999999  222   3589999999      8888888743

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	277
1xg2_B	153	Pectinesterase inhibitor; protein-protein complex,	5e-08
1xg2_A	317	Pectinesterase 1; protein-protein complex, beta he	3e-07
1x91_A	153	Invertase/pectin methylesterase inhibitor family p	4e-07
1gq8_A	319	Pectinesterase; hydrolase, carboxylic ester hydrol	1e-06
3uw0_A	364	Pectinesterase; right-handed beta-helix, carbohydr	2e-04
2nsp_A	342	Pectinesterase A; michaelis complex, hydrolase; HE	2e-04
3grh_A	422	YBHC, acyl-COA thioester hydrolase YBGC; beta-heli	5e-04

>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis} Length = 153

 Score = 50.4 bits (120), Expect = 5e-08
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 9/70 (12%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS 113
              +    + D L         + ++   SGD +  L  + SAA     TC D F+G  +
Sbjct: 74  TCSENYADAIDSL--------GQAKQFLTSGDYN-SLNIYASAAFDGAGTCEDSFEGPPN 124

Query: 114 IVKELLTMVH 123
           I  +L     
Sbjct: 125 IPTQLHQADL 134

>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum} Length = 317

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
           +  + VVA DGT ++  + + V A  D +  R+VIY+KRG
Sbjct: 1   IIANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRG 40

>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A Length = 153

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS 113
             +D  + +   L         +  +   SGD    +   +SAAL   +TC+D      S
Sbjct: 74  SCVDEYESAIGNL--------EEAFEHLASGDGM-GMNMKVSAALDGADTCLDDVKRLRS 124

Query: 114 IVKELLTMVH 123
           +   ++    
Sbjct: 125 VDSSVVNNSK 134

>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5 Length = 319

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
           V  +VVVAADG+ ++  + + V A  + +  R+VI IK G
Sbjct: 5   VGPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAG 44

>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp} Length = 364

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 149 SINGVQGDVVVAADGTWN-FTKIMDTVLATKDYNMKRFVIYIKRG 192
           ++N  Q + VV+     + F+ I   + +    +   F+I++K G
Sbjct: 25  TVNAAQYNAVVSTTPQGDEFSSINAALKSAPKDD-TPFIIFLKNG 68

>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A Length = 342

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 152 GVQGDVVVAADGT--WNFTKIMDTVLATKDYNMKRFVIYIKRG 192
               + VV+   +    F  I D + +    +   FVI IK G
Sbjct: 1   ATTYNAVVSKSSSDGKTFKTIADAIASAPAGS-TPFVILIKNG 42

>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12} Length = 422

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 3/43 (6%)

Query: 153 VQGDVVVAADGTWN--FTKIMDTVLAT-KDYNMKRFVIYIKRG 192
            Q D VV   GT     T I   V A       KR  I +  G
Sbjct: 73  AQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPG 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	277
1x91_A	153	Invertase/pectin methylesterase inhibitor family p	99.64
1xg2_B	153	Pectinesterase inhibitor; protein-protein complex,	99.64
1xg2_A	317	Pectinesterase 1; protein-protein complex, beta he	99.61
1gq8_A	319	Pectinesterase; hydrolase, carboxylic ester hydrol	99.6
2cj4_A	150	Invertase inhibitor; protein binding, four-helix b	99.56
2nsp_A	342	Pectinesterase A; michaelis complex, hydrolase; HE	99.49
3grh_A	422	YBHC, acyl-COA thioester hydrolase YBGC; beta-heli	99.46
3uw0_A	364	Pectinesterase; right-handed beta-helix, carbohydr	99.45
1ru4_A	400	Pectate lyase, PEL9A; parallel beta-helix; 1.60A {	93.21
1dbg_A	506	Chondroitinase B; beta helix, polysaccharide lyase	89.52
2pyg_A	377	Poly(beta-D-mannuronate) C5 epimerase 4; beta-heli	84.89

>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A

Probab=99.64  E-value=2.8e-16  Score=129.91  Aligned_cols=85  Identities=14%  Similarity=0.156  Sum_probs=69.4

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc----cc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT----ID-ASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l----~~-~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      ..+|..+++.++..++.++.+...  ..+    .+ ..+.|++||.|+|++++++|++++.+++.         ..++|+
T Consensus        31 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~---------~~~~d~  101 (153)
T 1x91_A           31 SANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLAS---------GDGMGM  101 (153)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---------TCHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cCHHHH
Confidence            468999999999877776655542  112    11 22899999999999999999999999963         248999


Q ss_pred             HHHHHHHHhhhhhhhhccCCC
Q 040602           91 RTWLSAALINHETCIDGFDGT  111 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e~  111 (277)
                      +||||||||||+||.|||.+.
T Consensus       102 ~t~lSaAlt~~~tC~dgf~~~  122 (153)
T 1x91_A          102 NMKVSAALDGADTCLDDVKRL  122 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHccHhHHHHHhccC
Confidence            999999999999999999875

>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}

Probab=99.64  E-value=3.8e-16  Score=128.69  Aligned_cols=85  Identities=15%  Similarity=0.056  Sum_probs=69.4

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc---cccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT---IDAS--LSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l---~~~~--k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      ..+|..+++.++..++.++.+...  ..+   ..++  +.|++||.|+|++++++|++++.+++.         ...+|+
T Consensus        31 ~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~---------~~~~d~  101 (153)
T 1xg2_B           31 SKDLKGLGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQFLTS---------GDYNSL  101 (153)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------TCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------CCHHHH
Confidence            458999999999877766655542  112   1122  899999999999999999999999964         247999


Q ss_pred             HHHHHHHHhhhhhhhhccCCC
Q 040602           91 RTWLSAALINHETCIDGFDGT  111 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e~  111 (277)
                      +|||||||||++||.|||.+.
T Consensus       102 ~t~lSaAlt~~~tC~dgf~~~  122 (153)
T 1xg2_B          102 NIYASAAFDGAGTCEDSFEGP  122 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSS
T ss_pred             HHHHHHHhcccchHHHHhccC
Confidence            999999999999999999865

>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}

Probab=99.61  E-value=6.9e-16  Score=144.64  Aligned_cols=70  Identities=27%  Similarity=0.427  Sum_probs=64.5

Q ss_pred             cceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcccccc
Q 040602          153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFLL  226 (277)
Q Consensus       153 ~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~~  226 (277)
                      ++++++|++||+|+|+|||+||+++|+++.+|++|+|++|+      |++.|+||+|+|+      |+++|||+|+++..
T Consensus         1 ~~~~i~V~~dGsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~------g~~~tiI~~~~~~~   74 (317)
T 1xg2_A            1 IIANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGD------GMYATTITGSLNVV   74 (317)
T ss_dssp             CCCSEEECTTSCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTSCSEEEEES------CTTTEEEEECCCTT
T ss_pred             CCceEEECCCCCCCcccHHHHHhhcccCCCceEEEEEcCCEEeeeeecCCCCCcEEEEEc------CCCCcEEEeccccc
Confidence            35789999999999999999999999999999999999999      8888999999999      89999999998765


Q ss_pred             cc
Q 040602          227 NL  228 (277)
Q Consensus       227 ~~  228 (277)
                      ++
T Consensus        75 ~g   76 (317)
T 1xg2_A           75 DG   76 (317)
T ss_dssp             TT
T ss_pred             CC
Confidence            44

>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5

Probab=99.60  E-value=1e-15  Score=143.56  Aligned_cols=71  Identities=28%  Similarity=0.436  Sum_probs=65.4

Q ss_pred             CcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          152 GVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       152 ~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      .++++++|++||+|+|+|||+||+++|+++.+|++|+|++|+      |++.|+||+|+|+      |+++|||+|+++.
T Consensus         4 ~~~~~i~V~~dGsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~------g~~~tiI~~~~~~   77 (319)
T 1gq8_A            4 TVGPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGD------GRTSTIITASKNV   77 (319)
T ss_dssp             SSCCSEEECTTSCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTCCSEEEEES------CTTTEEEEECCCT
T ss_pred             CccceEEECCCCCCCccCHHHHHHhccccCCceEEEEEcCCeEeeeeeccCCCccEEEEEc------CCCccEEEecccc
Confidence            367899999999999999999999999999999999999999      8888999999999      8999999999876


Q ss_pred             ccc
Q 040602          226 LNL  228 (277)
Q Consensus       226 ~~~  228 (277)
                      .++
T Consensus        78 ~~g   80 (319)
T 1gq8_A           78 QDG   80 (319)
T ss_dssp             TTT
T ss_pred             cCC
Confidence            543

>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*

Probab=99.56  E-value=1.1e-14  Score=120.21  Aligned_cols=83  Identities=7%  Similarity=-0.080  Sum_probs=67.2

Q ss_pred             cChHHHHHHHHHHHHHhhhchhh--hcc---c--ccchHHHHHHHHHHHHHH-HHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           19 SLPSLLWRSVMVGVVVNILTPFF--NQT---I--DASLSLFVDSLDLLDFST-DELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        19 ~~p~~l~~~a~~~~~~~~~~~~~--~~l---~--~~~k~AL~DC~eLlddSi-d~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      .+|..+++.++..+..++.+...  ..+   .  ...+.|++||.|+|++++ ++|++++.+++.         ...+|+
T Consensus        33 ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~~~~~~~~al~dC~e~y~~a~~~~L~~a~~~l~~---------~~~~~~  103 (150)
T 2cj4_A           33 GDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTK---------GDPKFA  103 (150)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGHHHHHHHHHHHHHHHHTHHHHHHHHHHH---------SCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------CCHHHH
Confidence            48999999999876665555442  112   1  223899999999999999 799999999964         247899


Q ss_pred             HHHHHHHHhhhhhhhhccCC
Q 040602           91 RTWLSAALINHETCIDGFDG  110 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e  110 (277)
                      +||||||+||++||.|||.+
T Consensus       104 ~t~lsaAlt~~~tC~dgf~~  123 (150)
T 2cj4_A          104 EDGMVGSSGDAQECEEYFKG  123 (150)
T ss_dssp             HHHHHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHHHHHhhCC
Confidence            99999999999999999975

>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A

Probab=99.49  E-value=2.6e-14  Score=135.14  Aligned_cols=66  Identities=17%  Similarity=0.244  Sum_probs=60.4

Q ss_pred             cceeEEEe--cCCCcCcccHHHHHHHhhcCCCceEEEEEeccc----ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          153 VQGDVVVA--ADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL----IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       153 ~~~~vvVa--~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv----I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      ..++++|+  +||+|+|+|||+||+++|+++ +|++|+||+|+    |.+.|+||+|+|+      |+++|||+|++.+
T Consensus         2 ~~~~~vV~~~~~g~g~f~TIq~Ai~aap~~~-~~~~I~I~~G~Y~E~V~I~k~~Itl~G~------g~~~tiI~~~~~~   73 (342)
T 2nsp_A            2 TTYNAVVSKSSSDGKTFKTIADAIASAPAGS-TPFVILIKNGVYNERLTITRNNLHLKGE------SRNGAVIAAATAA   73 (342)
T ss_dssp             CCCSEEECSCSSSCSCBSSHHHHHHTSCSSS-SCEEEEECSEEEECCEEECSTTEEEEES------CTTTEEEEECCCT
T ss_pred             CccEEEEccCCCCCCCcchHHHHHHhcccCC-CcEEEEEeCCEEEEEEEEecCeEEEEec------CCCCeEEEecccc
Confidence            35789999  999999999999999999987 89999999999    6667899999999      8999999999764

>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}

Probab=99.46  E-value=4.6e-14  Score=136.72  Aligned_cols=64  Identities=23%  Similarity=0.136  Sum_probs=58.2

Q ss_pred             cceeEEEecCCCc--CcccHHHHHHHhh-cCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEcc
Q 040602          153 VQGDVVVAADGTW--NFTKIMDTVLATK-DYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSM  222 (277)
Q Consensus       153 ~~~~vvVa~dGsg--~F~TIq~Aida~P-~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~  222 (277)
                      .+++++|++||+|  +|+||||||+++| .++.+|++||||+|+      ||+.|+||+|+|+      |+++|+|+..
T Consensus        73 ~~~~ivVa~dGsG~~~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~------G~~~t~Iti~  145 (422)
T 3grh_A           73 AQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGT------GEKPIDVKIG  145 (422)
T ss_dssp             SSCSEEECSTTCTTCCBSSHHHHHHHHHTTCCSSCEEEEECSEEEESCEEECCCSSCEEEEEC------SSSGGGEEEE
T ss_pred             CCccEEEeCCCCCCcCcCCHHHHHHhchhcCCCccEEEEEeCCeEeeeEEecCCCCcEEEEec------cCCCceEEEe
Confidence            5689999999998  9999999999997 467889999999999      8889999999999      8888888754

>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}

Probab=99.45  E-value=5.8e-14  Score=133.92  Aligned_cols=66  Identities=15%  Similarity=0.235  Sum_probs=47.6

Q ss_pred             cceeEEEecC-CCcCcccHHHHHHHhhcCCCceEEEEEeccc----ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          153 VQGDVVVAAD-GTWNFTKIMDTVLATKDYNMKRFVIYIKRGL----IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       153 ~~~~vvVa~d-Gsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv----I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      ..++++|++| |+|+|+|||+||+++|+++ +|++|+|++|+    |.+.|+||+|+|+      |+++|||+|++++
T Consensus        29 ~~~~~~V~~~~g~g~f~TIq~Ai~aa~~~~-~~~~I~I~~G~Y~E~v~I~k~~itl~G~------g~~~TiIt~~~~~   99 (364)
T 3uw0_A           29 AQYNAVVSTTPQGDEFSSINAALKSAPKDD-TPFIIFLKNGVYTERLEVARSHVTLKGE------NRDGTVIGANTAA   99 (364)
T ss_dssp             ---------------CCCHHHHHHHSCSSS-SCEEEEECSEEECCCEEECSTTEEEEES------CTTTEEEEECCCT
T ss_pred             cCceEEEcCCCCCCCcccHHHHHhhcccCC-CcEEEEEeCCEEEEEEEEcCCeEEEEec------CCCCeEEEccccc
Confidence            4578999999 9999999999999999986 68999999999    6667899999999      8999999999865

>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9

Probab=93.21  E-value=0.14  Score=48.99  Aligned_cols=57  Identities=14%  Similarity=0.127  Sum_probs=42.4

Q ss_pred             cceeEEEecCCCc---------CcccHHHHHHHhhcCCCceEEEEEeccccc------------ccCc-----cEEEEec
Q 040602          153 VQGDVVVAADGTW---------NFTKIMDTVLATKDYNMKRFVIYIKRGLIP------------LPHW-----DRLFVAV  206 (277)
Q Consensus       153 ~~~~vvVa~dGsg---------~F~TIq~Aida~P~~~~~~~vI~Ik~GvI~------------~~k~-----nI~l~Gd  206 (277)
                      ...++.|+++|+.         -| |||+|+++++.+    -+|+|++|+..            ..|.     -|+|.|.
T Consensus        13 ~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~pG----dtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~   87 (400)
T 1ru4_A           13 TKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVNPG----ELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAA   87 (400)
T ss_dssp             CSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCCTT----CEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEG
T ss_pred             CccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCCCC----CEEEECCCeEccccccccceeEEecCCCCCCCCEEEEEe
Confidence            3457899998863         59 999999999765    26999998722            2222     2999998


Q ss_pred             cccCCCCCCCeEEE
Q 040602          207 FLHLLSEMTETLMN  220 (277)
Q Consensus       207 ~~~~~~g~~~TiIt  220 (277)
                            +.+++||.
T Consensus        88 ------~g~~~vI~   95 (400)
T 1ru4_A           88 ------NCGRAVFD   95 (400)
T ss_dssp             ------GGCCEEEE
T ss_pred             ------cCCCCEEe
Confidence                  55688887

>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*

Probab=89.52  E-value=0.28  Score=48.36  Aligned_cols=52  Identities=15%  Similarity=0.098  Sum_probs=39.0

Q ss_pred             eEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc-----ccc-----cCccEEEEeccccCCCCCCCeEEEcc
Q 040602          156 DVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL-----IPL-----PHWDRLFVAVFLHLLSEMTETLMNSM  222 (277)
Q Consensus       156 ~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv-----I~~-----~k~nI~l~Gd~~~~~~g~~~TiIt~~  222 (277)
                      ++.|+     ++.+||+||++++.+    -+|+|++|+     |..     ....|++.|.      +.++++|.|.
T Consensus        25 ~i~V~-----~~~~Lq~Ai~~A~pG----DtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~------~~~~~vi~G~   86 (506)
T 1dbg_A           25 GQVVA-----SNETLYQVVKEVKPG----GLVQIADGTYKDVQLIVSNSGKSGLPITIKAL------NPGKVFFTGD   86 (506)
T ss_dssp             -CEEC-----SHHHHHHHHHHCCTT----CEEEECSEEEETCEEEECCCCBTTBCEEEEES------STTSEEEEES
T ss_pred             EEEeC-----CHHHHHHHHHhCCCC----CEEEECCCEEecceEEEecCCcCCCCEEEECC------CCCccEEeCC
Confidence            35665     588999999999877    479999998     332     1455999997      6667888875

>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*

Probab=84.89  E-value=1  Score=41.27  Aligned_cols=51  Identities=16%  Similarity=0.129  Sum_probs=38.9

Q ss_pred             cCcccHHHHHHHhhcCCCceEEEEEeccc--cc---------c-cCccEEEEeccccCCCCCCCeEEEccc
Q 040602          165 WNFTKIMDTVLATKDYNMKRFVIYIKRGL--IP---------L-PHWDRLFVAVFLHLLSEMTETLMNSMR  223 (277)
Q Consensus       165 g~F~TIq~Aida~P~~~~~~~vI~Ik~Gv--I~---------~-~k~nI~l~Gd~~~~~~g~~~TiIt~~~  223 (277)
                      .+-..||+||++++..  ..-+|||-+|+  +.         . -+++++|.|+      |+++|+|....
T Consensus        17 ddt~aiq~Ai~~a~~~--gg~~v~~p~G~y~~~~~~~~~~g~l~~~~~v~l~g~------g~~~t~l~~~~   79 (377)
T 2pyg_A           17 DDRASIQAAIDAAYAA--GGGTVYLPAGEYRVSAAGEPGDGCLMLKDGVYLAGA------GMGETVIKLID   79 (377)
T ss_dssp             ECHHHHHHHHHHHHHT--TSEEEEECSEEEEECCCSSGGGCSEECCTTEEEEES------SBTTEEEEECT
T ss_pred             chHHHHHHHHHHHHhc--CCCEEEECCeEEEEcccccCCcccEEecCCeEEEEc------CCCCcEEEecC
Confidence            4578899999999864  34578999998  42         1 3678999999      88888887543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	277
d1gq8a_	319	b.80.1.5 (A:) Pectin methylesterase PemA {Carrot (	6e-07
d1x91a_	149	a.29.6.1 (A:) Pectin methylesterase inhibitor 1, P	2e-05
d2cj4a1	147	a.29.6.1 (A:4-150) Invertase inhibitor {Common tob	1e-04
d1qjva_	342	b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia	0.001

>d1gq8a_ b.80.1.5 (A:) Pectin methylesterase PemA {Carrot (Daucus carota) [TaxId: 4039]} Length = 319

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Carrot (Daucus carota) [TaxId: 4039]

 Score = 47.6 bits (113), Expect = 6e-07
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 153 VQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRG 192
           V  +VVVAADG+ ++  + + V A  + +  R+VI IK G
Sbjct: 5   VGPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAG 44

>d1x91a_ a.29.6.1 (A:) Pectin methylesterase inhibitor 1, PMEI1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 149

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Pectin methylesterase inhibitor 1, PMEI1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS 113
             +D  + +   L         +  +   SGD    +   +SAAL   +TC+D      S
Sbjct: 70  SCVDEYESAIGNL--------EEAFEHLASGDGM-GMNMKVSAALDGADTCLDDVKRLRS 120

Query: 114 IVKELLTMVH 123
           +   ++    
Sbjct: 121 VDSSVVNNSK 130

>d2cj4a1 a.29.6.1 (A:4-150) Invertase inhibitor {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 147

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Invertase inhibitor
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 9/70 (12%), Positives = 18/70 (25%), Gaps = 8/70 (11%)

Query: 54  DSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDLRTWLSAALINHETCIDGFDGTNS 113
           +                     +  +    GD        +  +  + + C + F G+ S
Sbjct: 72  NCAFSYKVILTAS-------LPEAIEALTKGDPK-FAEDGMVGSSGDAQECEEYFKGSKS 123

Query: 114 IVKELLTMVH 123
               L   VH
Sbjct: 124 PFSALNIAVH 133

>d1qjva_ b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia chrysanthemi [TaxId: 556]} Length = 342

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Erwinia chrysanthemi [TaxId: 556]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 156 DVVVAADGT--WNFTKIMDTVLATKDYNMKRFVIYIKRG 192
           + VV+   +    F  I D + +    +   FVI IK G
Sbjct: 5   NAVVSKSSSDGKTFKTIADAIASAPAGS-TPFVILIKNG 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	277
d1gq8a_	319	Pectin methylesterase PemA {Carrot (Daucus carota)	99.73
d1x91a_	149	Pectin methylesterase inhibitor 1, PMEI1 {Thale cr	99.49
d2cj4a1	147	Invertase inhibitor {Common tobacco (Nicotiana tab	99.43
d1qjva_	342	Pectin methylesterase PemA {Erwinia chrysanthemi [	99.34
d1ru4a_	400	Pectate transeliminase {Erwinia chrysanthemi [TaxI	96.08
d1ofla_	481	Chondroitinase B {Pedobacter heparinus [TaxId: 984	89.25

>d1gq8a_ b.80.1.5 (A:) Pectin methylesterase PemA {Carrot (Daucus carota) [TaxId: 4039]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Carrot (Daucus carota) [TaxId: 4039]

Probab=99.73  E-value=2.6e-18  Score=159.18  Aligned_cols=74  Identities=27%  Similarity=0.413  Sum_probs=68.5

Q ss_pred             CCCcceeEEEecCCCcCcccHHHHHHHhhcCCCceEEEEEeccc------ccccCccEEEEeccccCCCCCCCeEEEccc
Q 040602          150 INGVQGDVVVAADGTWNFTKIMDTVLATKDYNMKRFVIYIKRGL------IPLPHWDRLFVAVFLHLLSEMTETLMNSMR  223 (277)
Q Consensus       150 ~~~~~~~vvVa~dGsg~F~TIq~Aida~P~~~~~~~vI~Ik~Gv------I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~  223 (277)
                      .+.+.+++||++||+|||+|||+|||++|.++.+|++|+||+|+      ||+.|+||+|+|+      |++.|+|+++.
T Consensus         2 ~~~~~p~i~V~~dGsGdf~TIq~AIda~p~~~~~~~~I~I~~G~Y~E~V~I~~~k~~itl~G~------g~~~tiIt~~~   75 (319)
T d1gq8a_           2 SSTVGPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGD------GRTSTIITASK   75 (319)
T ss_dssp             CCSSCCSEEECTTSCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTCCSEEEEES------CTTTEEEEECC
T ss_pred             CCcCCCCEEECCCCCCCccCHHHHHhhCccCCCCcEEEEEcCceEEEEEEECCCCCeEEEEEc------CCCCcEEEecc
Confidence            34578999999999999999999999999999999999999999      8899999999999      99999999998


Q ss_pred             cccccc
Q 040602          224 FLLNLH  229 (277)
Q Consensus       224 ~~~~~~  229 (277)
                      ++.+..
T Consensus        76 ~~~~~~   81 (319)
T d1gq8a_          76 NVQDGS   81 (319)
T ss_dssp             CTTTTC
T ss_pred             cccCCC
Confidence            876553

>d1x91a_ a.29.6.1 (A:) Pectin methylesterase inhibitor 1, PMEI1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Pectin methylesterase inhibitor 1, PMEI1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=2.5e-14  Score=115.66  Aligned_cols=86  Identities=13%  Similarity=0.096  Sum_probs=67.8

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc---cc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCchhH
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT---ID--ASLSLFVDSLDLLDFSTDELSCLYTFVFNKTRKLNGSGDLSSDL   90 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l---~~--~~k~AL~DC~eLlddSid~L~~Sl~~L~~~~~~~~~~~~~~~Dv   90 (277)
                      ..+|..+++.++..+...+.....  ..+   ..  ..+.|++||.++|++++++|++++.+++.         ....|+
T Consensus        27 ~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~---------~~~~~~   97 (149)
T d1x91a_          27 SANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLAS---------GDGMGM   97 (149)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---------TCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------CCHHHH
Confidence            357889999888765554444431  112   12  23899999999999999999999999964         357899


Q ss_pred             HHHHHHHHhhhhhhhhccCCCc
Q 040602           91 RTWLSAALINHETCIDGFDGTN  112 (277)
Q Consensus        91 qTWLSAALTnq~TClDGF~e~~  112 (277)
                      ++|||+|+|+++||.|||.+.+
T Consensus        98 ~~~lsaa~~~~~tC~d~f~~~~  119 (149)
T d1x91a_          98 NMKVSAALDGADTCLDDVKRLR  119 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHhHhHhHHHHhhcC
Confidence            9999999999999999998753

>d2cj4a1 a.29.6.1 (A:4-150) Invertase inhibitor {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Invertase inhibitor
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.43  E-value=1.9e-13  Score=110.46  Aligned_cols=86  Identities=7%  Similarity=-0.066  Sum_probs=66.9

Q ss_pred             hcChHHHHHHHHHHHHHhhhchhh--hcc----c-ccchHHHHHHHHHHHHHHH-HHHHHHHHHhcccccCCCCCCCchh
Q 040602           18 KSLPSLLWRSVMVGVVVNILTPFF--NQT----I-DASLSLFVDSLDLLDFSTD-ELSCLYTFVFNKTRKLNGSGDLSSD   89 (277)
Q Consensus        18 ~~~p~~l~~~a~~~~~~~~~~~~~--~~l----~-~~~k~AL~DC~eLlddSid-~L~~Sl~~L~~~~~~~~~~~~~~~D   89 (277)
                      ..+|+.+++.++.....++.....  ..+    . ...+.|++||.|+|+++++ .|+.+...+..         ....|
T Consensus        29 ~ad~~~la~~av~~a~~~a~~~~~~i~~l~~~~~~~~~~~al~~C~e~y~~av~~~l~~a~~~l~~---------~~~~~   99 (147)
T d2cj4a1          29 TGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTK---------GDPKF   99 (147)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGHHHHHHHHHHHHHHHHTHHHHHHHHHHH---------SCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCHHH
Confidence            458999999998866655544331  112    1 2228999999999999998 58888888853         35899


Q ss_pred             HHHHHHHHHhhhhhhhhccCCCc
Q 040602           90 LRTWLSAALINHETCIDGFDGTN  112 (277)
Q Consensus        90 vqTWLSAALTnq~TClDGF~e~~  112 (277)
                      +++|||||+++++||.|||.+..
T Consensus       100 ~~~~lsaa~~~~~tC~d~f~~~~  122 (147)
T d2cj4a1         100 AEDGMVGSSGDAQECEEYFKGSK  122 (147)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTSC
T ss_pred             HHHHHHHHHhHHHHhhHHhCCCC
Confidence            99999999999999999998754

>d1qjva_ b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia chrysanthemi [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Erwinia chrysanthemi [TaxId: 556]

Probab=99.34  E-value=4.4e-13  Score=124.34  Aligned_cols=66  Identities=17%  Similarity=0.243  Sum_probs=58.5

Q ss_pred             cceeEEEecCCCc--CcccHHHHHHHhhcCCCceEEEEEeccc----ccccCccEEEEeccccCCCCCCCeEEEccccc
Q 040602          153 VQGDVVVAADGTW--NFTKIMDTVLATKDYNMKRFVIYIKRGL----IPLPHWDRLFVAVFLHLLSEMTETLMNSMRFL  225 (277)
Q Consensus       153 ~~~~vvVa~dGsg--~F~TIq~Aida~P~~~~~~~vI~Ik~Gv----I~~~k~nI~l~Gd~~~~~~g~~~TiIt~~~~~  225 (277)
                      ..+++||+++|++  +|+|||+||+++|+++ .|++|+||+|+    |.+.|+||+|+|+      |+++|||++++..
T Consensus         2 ~~~~~vV~~~~s~~~~f~TIq~AI~a~p~~~-~~~vI~I~~G~Y~E~V~I~k~~itl~G~------~~~~tiI~~~~~~   73 (342)
T d1qjva_           2 TTYNAVVSKSSSDGKTFKTIADAIASAPAGS-TPFVILIKNGVYNERLTITRNNLHLKGE------SRNGAVIAAATAA   73 (342)
T ss_dssp             CCCSEEECSCSSSSSCBSSHHHHHHTSCSSS-SCEEEEECSEEECCCEEECSTTEEEEES------CTTTEEEEECCCT
T ss_pred             CCCCEEEEcCCCCCcCchhHHHHHHhCccCC-ceEEEEEcCeEEEEEEEEcCCCeEEEEc------CCCCcEEEecccc
Confidence            3578999999875  7999999999999975 57889999999    6667899999999      8999999998776

>d1ru4a_ b.80.1.9 (A:) Pectate transeliminase {Erwinia chrysanthemi [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate transeliminase
domain: Pectate transeliminase
species: Erwinia chrysanthemi [TaxId: 556]

Probab=96.08  E-value=0.0049  Score=53.21  Aligned_cols=36  Identities=19%  Similarity=0.179  Sum_probs=28.6

Q ss_pred             ceeEEEecCCCcC--------cccHHHHHHHhhcCCCceEEEEEeccc
Q 040602          154 QGDVVVAADGTWN--------FTKIMDTVLATKDYNMKRFVIYIKRGL  193 (277)
Q Consensus       154 ~~~vvVa~dGsg~--------F~TIq~Aida~P~~~~~~~vI~Ik~Gv  193 (277)
                      ...+.|+++|++.        |+|||+||+++..+.    +|+|++|+
T Consensus        14 ~~~~YVs~~Gsd~~~Gs~~~p~~tIq~Ai~~a~~GD----tI~v~~Gt   57 (400)
T d1ru4a_          14 KRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGE----LILLKPGT   57 (400)
T ss_dssp             SCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTC----EEEECSEE
T ss_pred             CCeEEECCCCcCCCCCCccccHHHHHHHHHhCCCcC----EEEEcCce
Confidence            3567888876532        999999999986643    79999998

>d1ofla_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus [TaxId: 984]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Chondroitinase B
domain: Chondroitinase B
species: Pedobacter heparinus [TaxId: 984]

Probab=89.25  E-value=0.16  Score=45.62  Aligned_cols=47  Identities=11%  Similarity=0.082  Sum_probs=35.5

Q ss_pred             cccHHHHHHHhhcCCCceEEEEEeccc-----cccc-----CccEEEEeccccCCCCCCCeEEEccc
Q 040602          167 FTKIMDTVLATKDYNMKRFVIYIKRGL-----IPLP-----HWDRLFVAVFLHLLSEMTETLMNSMR  223 (277)
Q Consensus       167 F~TIq~Aida~P~~~~~~~vI~Ik~Gv-----I~~~-----k~nI~l~Gd~~~~~~g~~~TiIt~~~  223 (277)
                      -+|||+||+++..+.    +|+|++|+     |...     ...|+|.|+      +.++++|+|..
T Consensus         6 ~~tiq~Ai~~a~pGD----tI~l~~GtY~~~~i~~~~~Gt~~~pIti~a~------~~g~v~i~G~s   62 (481)
T d1ofla_           6 NETLYQVVKEVKPGG----LVQIADGTYKDVQLIVSNSGKSGLPITIKAL------NPGKVFFTGDA   62 (481)
T ss_dssp             HHHHHHHHHHCCTTC----EEEECSEEEETCEEEECCCCBTTBCEEEEES------STTSEEEEESC
T ss_pred             hHHHHHHHHhCCCCC----EEEECCCEEEcCEEEeccCcccCCCEEEEeC------CCCceEEcCCC
Confidence            579999999987653    69999998     2111     234999998      78888888754