Citrus Sinensis ID: 040624

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270---
MLFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYKTMKDYTSIV
ccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEccccccccccEEcccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccccccccccccccccccccEEEEEEccccccEEEEEccEEEEcccccccEEEEEccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEccccccccccccccccHHHHHccc
cHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHccccccEEcccEEEEEcccccccHcEEEEEEcccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccccccccEcccccccccccEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEEcccHHHcccccccccccHHHHHHHc
MLFAQRLYSALRALYGAVKIInhgidpafmdKVDEVGKqffglpleEKKKYArengsydgymnhiidsKDQAFDWIDrlhlvtkpedkrqlklwpenpqSFREILHEYTAKIEKLNEMLLKAIARALNLEENCfldmygeeasMLSIfnlyppcprpdlaiglkphadaSVFTYLIQDKeveglqfqkddqwyrvpvipgafvinvgdqieimsngifkspihrvvtnterGRMSLVMfcfpnpnkeiepvkglvtgtrprlykTMKDYTSIV
MLFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLvtkpedkrqlklwpenpqsFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMsngifkspihRVVTNTERGRMSLVMFCFpnpnkeiepvkglvtgtrprlyktmkdytsiv
MLFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYKTMKDYTSIV
**FAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLY**********
MLFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYKTMKDYTSIV
MLFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYKTMKDYTSIV
MLFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYKTMKDYTSIV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREIxxxxxxxxxxxxxxxxxxxxxxxxxxxxCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGLVTGTRPRLYKTMKDYTSIV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query273 2.2.26 [Sep-21-2011]
D4N502360 Codeine O-demethylase OS= N/A no 0.945 0.716 0.386 3e-52
D4N501364 Probable 2-oxoglutarate/F N/A no 0.959 0.719 0.363 1e-50
Q39224358 Protein SRG1 OS=Arabidops no no 0.934 0.712 0.379 2e-49
D4N500364 Thebaine 6-O-demethylase N/A no 0.959 0.719 0.367 8e-49
Q9M547334 Flavonol synthase/flavano N/A no 0.959 0.784 0.397 6e-48
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.919 0.744 0.385 6e-45
Q07512348 Flavonol synthase/flavano N/A no 0.923 0.724 0.373 4e-43
P51091357 Leucoanthocyanidin dioxyg N/A no 0.908 0.694 0.350 6e-43
A2A1A0352 S-norcoclaurine synthase N/A no 0.904 0.701 0.370 1e-42
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.930 0.758 0.374 4e-42
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function desciption
 Score =  205 bits (522), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 158/259 (61%), Gaps = 1/259 (0%)

Query: 6   RLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHI 65
           +L+SA +  +G  +++NHG+D   MD +    K FF LP+ EK KY +++G ++G+    
Sbjct: 76  KLHSACKE-WGFFQLVNHGVDALLMDNIKSEIKGFFNLPMNEKTKYGQQDGDFEGFGQPY 134

Query: 66  IDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIAR 125
           I+S+DQ  DW +   +++ P   R+  L+PE P  FRE L  Y +K++KL+ ++ + + +
Sbjct: 135 IESEDQRLDWTEVFSMLSLPLHLRKPHLFPELPLPFRETLESYLSKMKKLSTVVFEMLEK 194

Query: 126 ALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQ 185
           +L L E   +    E+       N YPPCPRP+L +GL  H+D S  T L+Q  EVEGLQ
Sbjct: 195 SLQLVEIKGMTDLFEDGLQTMRMNYYPPCPRPELVLGLTSHSDFSGLTILLQLNEVEGLQ 254

Query: 186 FQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPN 245
            +K+++W  +  +P AF++NVGD +EIM+NGI++S  HR V N+ + R+S+  F      
Sbjct: 255 IRKEERWISIKPLPDAFIVNVGDILEIMTNGIYRSVEHRAVVNSTKERLSIATFHDSKLE 314

Query: 246 KEIEPVKGLVTGTRPRLYK 264
            EI P+  LVT   P L+K
Sbjct: 315 SEIGPISSLVTPETPALFK 333
Non-heme dioxygenase catalyzing the conversion of codeine to morphine. Catalyzes also, with lower efficiency, the 3-O-demethylation of thebaine to oripavine and of (S)-scoulerine to 3-O-demethylscoulerine. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, pavine or noscapine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 3EC: 2
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|Q9M547|FLS_EUSER Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=FLS PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query273
224120306347 predicted protein [Populus trichocarpa] 0.945 0.743 0.593 7e-94
224142523353 predicted protein [Populus trichocarpa] 0.978 0.756 0.598 4e-93
297808105348 hypothetical protein ARALYDRAFT_488949 [ 0.974 0.764 0.584 5e-90
297847230348 oxidoreductase [Arabidopsis lyrata subsp 0.978 0.767 0.578 1e-89
15222131348 2-oxoglutarate (2OG) and Fe(II)-dependen 0.978 0.767 0.582 1e-88
21593366348 ethylene-forming-enzyme-like dioxygenase 0.978 0.767 0.574 2e-88
15241348348 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.974 0.764 0.576 2e-88
15241383349 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.978 0.765 0.579 5e-88
359806096351 uncharacterized protein LOC100799195 [Gl 0.974 0.757 0.561 6e-87
15239524349 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.956 0.747 0.553 9e-87
>gi|224120306|ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|222872945|gb|EEF10076.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 153/258 (59%), Positives = 205/258 (79%)

Query: 15  YGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFD 74
           +G  +++NHG+  +F+DK+ +V K+FF L +E+K+KY+RE  S +GY N +I S  Q  D
Sbjct: 73  WGCFQVVNHGMTSSFLDKIRDVSKRFFALSMEDKQKYSREADSIEGYGNDMILSDHQTID 132

Query: 75  WIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCF 134
           W DRL+L   PED+R++K WPENP+ FRE L+EYT K++++NE+LL+A+A +LNLEE+ F
Sbjct: 133 WSDRLYLTISPEDQRKIKFWPENPKDFRETLNEYTMKLQEINEILLRAMAMSLNLEESSF 192

Query: 135 LDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYR 194
           LD YGE   + + FN YPPCPRPD  +G+KPHADAS  T+L+QDKEVEGLQF KD+QW+R
Sbjct: 193 LDQYGERPLVAARFNFYPPCPRPDRILGVKPHADASAITFLLQDKEVEGLQFLKDNQWFR 252

Query: 195 VPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEIEPVKGL 254
           VP+IP A +INVGDQ+EIMSNGIFKSP+HRVVTNTE+ R +L +FC P+ +KEI+P  GL
Sbjct: 253 VPIIPHALLINVGDQVEIMSNGIFKSPVHRVVTNTEKERNTLAVFCIPDSDKEIKPADGL 312

Query: 255 VTGTRPRLYKTMKDYTSI 272
           ++ TRP LYK +KDY SI
Sbjct: 313 ISETRPSLYKKVKDYVSI 330

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224142523|ref|XP_002324605.1| predicted protein [Populus trichocarpa] gi|222866039|gb|EEF03170.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297808105|ref|XP_002871936.1| hypothetical protein ARALYDRAFT_488949 [Arabidopsis lyrata subsp. lyrata] gi|297317773|gb|EFH48195.1| hypothetical protein ARALYDRAFT_488949 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297847230|ref|XP_002891496.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297337338|gb|EFH67755.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15222131|ref|NP_175364.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] gi|5430761|gb|AAD43161.1|AC007504_16 Similar to ethylene-forming-enzyme-like dioxygenase [Arabidopsis thaliana] gi|332194303|gb|AEE32424.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21593366|gb|AAM65315.1| ethylene-forming-enzyme-like dioxygenase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15241348|ref|NP_197540.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|27754538|gb|AAO22716.1| putative ethylene-forming dioxygenase [Arabidopsis thaliana] gi|28827734|gb|AAO50711.1| putative ethylene-forming dioxygenase [Arabidopsis thaliana] gi|332005456|gb|AED92839.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15241383|ref|NP_197555.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|21537316|gb|AAM61657.1| ethylene-forming-enzyme-like dioxygenase-like [Arabidopsis thaliana] gi|133778810|gb|ABO38745.1| At5g20550 [Arabidopsis thaliana] gi|332005474|gb|AED92857.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359806096|ref|NP_001241442.1| uncharacterized protein LOC100799195 [Glycine max] gi|255640143|gb|ACU20362.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|15239524|ref|NP_200211.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|10177262|dbj|BAB10730.1| ethylene-forming-enzyme-like dioxygenase [Arabidopsis thaliana] gi|67633882|gb|AAY78865.1| oxidoreductase [Arabidopsis thaliana] gi|332009054|gb|AED96437.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query273
TAIR|locus:2010242348 AT1G49390 [Arabidopsis thalian 0.978 0.767 0.582 2.4e-83
TAIR|locus:2149214348 AT5G20400 [Arabidopsis thalian 0.974 0.764 0.576 3.9e-83
TAIR|locus:2149907349 AT5G20550 [Arabidopsis thalian 0.978 0.765 0.579 3.9e-83
TAIR|locus:2154744349 AT5G54000 [Arabidopsis thalian 0.956 0.747 0.553 7.4e-82
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.934 0.700 0.442 8e-53
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.934 0.706 0.369 3.7e-48
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.934 0.712 0.379 4.7e-48
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.948 0.733 0.357 1.2e-47
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.948 0.698 0.368 1.6e-47
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.934 0.702 0.386 1.1e-46
TAIR|locus:2010242 AT1G49390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
 Identities = 156/268 (58%), Positives = 194/268 (72%)

Query:     5 QRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNH 64
             ++L+SAL + +G V+++NHGI  AF+DK+ ++ KQFF LP EEK K ARE G+  GY N 
Sbjct:    65 KKLHSAL-STWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKHKCARETGNIQGYGND 123

Query:    65 IIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIA 124
             +I S +Q  DWIDRL L T PEDKRQLK WP+ P  F E L EYT K   L E   KA+A
Sbjct:   124 MILSDNQVLDWIDRLFLTTYPEDKRQLKFWPQVPVGFSETLDEYTMKQRVLIEKFFKAMA 183

Query:   125 RALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGL 184
             R+L LEENCFL+MYGE A M S FN +PPCPRPD  IG+KPHAD S  T L+ DK+VEGL
Sbjct:   184 RSLELEENCFLEMYGENAVMNSRFNFFPPCPRPDKVIGIKPHADGSAITLLLPDKDVEGL 243

Query:   185 QFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNP 244
             QF KD +WY+ P++P   +I +GDQ+EIMSNGI+KSP+HRVVTN E+ R+S+  FC P  
Sbjct:   244 QFLKDGKWYKAPIVPDTILITLGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCVPGL 303

Query:   245 NKEIEPVKGLVTGTRPRLYKTMKDYTSI 272
             +KEI P  GLVT  RPRLYKT+  Y  +
Sbjct:   304 DKEIHPADGLVTEARPRLYKTVTKYVDL 331
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2149214 AT5G20400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149907 AT5G20550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154744 AT5G54000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query273
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-128
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 3e-77
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 7e-73
PLN02216357 PLN02216, PLN02216, protein SRG1 9e-69
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-62
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-61
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-59
PLN02947374 PLN02947, PLN02947, oxidoreductase 4e-59
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 6e-51
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 5e-50
PLN02904357 PLN02904, PLN02904, oxidoreductase 8e-49
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 8e-49
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 6e-48
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-48
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-42
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 6e-42
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 3e-41
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-39
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 6e-33
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 3e-32
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 3e-32
PLN02485329 PLN02485, PLN02485, oxidoreductase 6e-32
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-31
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-28
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 7e-24
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-17
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 5e-17
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 8e-05
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  368 bits (945), Expect = e-128
 Identities = 162/264 (61%), Positives = 203/264 (76%), Gaps = 1/264 (0%)

Query: 6   RLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHI 65
           +L+SAL + +G V+++NHGI  AF+DK+ ++ KQFF LP EEK+K ARE GS  GY N +
Sbjct: 66  KLHSAL-STWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQGYGNDM 124

Query: 66  IDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIAR 125
           I S DQ  DWIDRL+L T PED+RQLK WP+ P  FRE LHEYT K   + E   KA+AR
Sbjct: 125 ILSDDQVLDWIDRLYLTTYPEDQRQLKFWPQVPVGFRETLHEYTMKQRLVIEKFFKAMAR 184

Query: 126 ALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQ 185
           +L LEENCFL+MYGE A+M + FN+YPPCPRPD  IG+KPHAD S FT L+ DK+VEGLQ
Sbjct: 185 SLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQ 244

Query: 186 FQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPN 245
           F KD +WY+ P++P   +INVGDQ+EIMSNGI+KSP+HRVVTN E+ R+S+  FC P  +
Sbjct: 245 FLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGAD 304

Query: 246 KEIEPVKGLVTGTRPRLYKTMKDY 269
           KEI+PV GLV+  RPRLYKT+K Y
Sbjct: 305 KEIQPVDGLVSEARPRLYKTVKKY 328

Length = 348
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 273
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02997325 flavonol synthase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02947374 oxidoreductase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.93
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.85
PLN03176120 flavanone-3-hydroxylase; Provisional 99.6
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.97
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.87
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.71
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 95.22
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 94.91
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.76
TIGR02466201 conserved hypothetical protein. This family consis 86.1
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=4.4e-74  Score=508.99  Aligned_cols=269  Identities=38%  Similarity=0.699  Sum_probs=246.0

Q ss_pred             HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCCHHHHhhhhhcCCCccccccccccCCCcccchhhhccc
Q 040624            2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARENGSYDGYMNHIIDSKDQAFDWIDRLHL   81 (273)
Q Consensus         2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~   81 (273)
                      +++++|++||++ ||||||+||||+.++++++++.+++||+||.|+|+++...++.++||+........+..||+|.+.+
T Consensus        69 ~~~~~l~~Ac~~-~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~  147 (357)
T PLN02216         69 SEVEKLDFACKE-WGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFL  147 (357)
T ss_pred             HHHHHHHHHHHH-CcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeee
Confidence            478999999999 9999999999999999999999999999999999999775556889976544344556799999987


Q ss_pred             ccCCcchhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhhcCCCccceEEeeeCCCCCCCCcc
Q 040624           82 VTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGEEASMLSIFNLYPPCPRPDLAI  161 (273)
Q Consensus        82 ~~~p~~~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~  161 (273)
                      ...|.....+|.||+.++.||+.+++|+++|.+++.+|+++|+++||+++++|.+.+.....+.||++|||||+.++..+
T Consensus       148 ~~~p~~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~  227 (357)
T PLN02216        148 TMQPVRLRKPHLFPKLPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVI  227 (357)
T ss_pred             eccCcccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCccccc
Confidence            66665555789999989999999999999999999999999999999999999988843345789999999999888889


Q ss_pred             ccCcccCCCceEEEeecCCCCceEEeeCCeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCCCCCeeEEEEeec
Q 040624          162 GLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCF  241 (273)
Q Consensus       162 ~~~~H~D~~~lTll~~d~~~~GLqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F~~  241 (273)
                      |+++|||+|+||||+|+++++||||..+|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++.++|||++||+.
T Consensus       228 G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~  307 (357)
T PLN02216        228 GLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHN  307 (357)
T ss_pred             CccCcccCceEEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEec
Confidence            99999999999999995379999999999999999999999999999999999999999999999888889999999999


Q ss_pred             CCCCCeEecCCCccCCCCCCCCcchh--hhhh
Q 040624          242 PNPNKEIEPVKGLVTGTRPRLYKTMK--DYTS  271 (273)
Q Consensus       242 P~~~~~i~p~~~~~~~~~~~~y~~~~--e~~~  271 (273)
                      |+.|++|+|+++++++++|++|++++  ||+.
T Consensus       308 P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~  339 (357)
T PLN02216        308 TGMGKEIGPAKSLVERQKAALFKSLTTKEYFD  339 (357)
T ss_pred             CCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHH
Confidence            99999999999999999999999999  9875

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query273
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 7e-41
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 8e-41
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 1e-39
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-30
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-21
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 3e-11
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-09
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 4e-09
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 142/251 (56%), Gaps = 6/251 (2%)
Query: 15  YGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARE--NGSYDGYMNHIIDSKDQA 72
           +G + +INHGI    M++V + G++FF L +EEK+KYA +   G   GY + + ++    
Sbjct: 77  WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQ 136
Query: 73  FDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEEN 132
            +W D    +  PE+KR L +WP+ P  + E   EY   +  L   + KA++  L LE +
Sbjct: 137 LEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPD 196
Query: 133 CFLDMYG--EEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDD 190
                 G  EE  +    N YP CP+P+LA+G++ H D S  T+++ +  V GLQ   + 
Sbjct: 197 RLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM-VPGLQLFYEG 255
Query: 191 QWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNKEI-E 249
           +W     +P + V+++GD +EI+SNG +KS +HR + N E+ R+S  +FC P  +K + +
Sbjct: 256 KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLK 315
Query: 250 PVKGLVTGTRP 260
           P+  +V+   P
Sbjct: 316 PLPEMVSVESP 326
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query273
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-117
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-116
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-75
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-72
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-72
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-65
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  339 bits (871), Expect = e-117
 Identities = 85/257 (33%), Positives = 142/257 (55%), Gaps = 8/257 (3%)

Query: 20  IINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYAREN--GSYDGYMNHIIDSKDQAFDWID 77
           +INHGI    M++V + G++FF L +EEK+KYA +   G   GY + + ++     +W D
Sbjct: 82  LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWED 141

Query: 78  RLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDM 137
               +  PE+KR L +WP+ P  + E   EY   +  L   + KA++  L LE +     
Sbjct: 142 YFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKE 201

Query: 138 YG--EEASMLSIFNLYPPCPRPDLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRV 195
            G  EE  +    N YP CP+P+LA+G++ H D S  T+++ +  V GLQ   + +W   
Sbjct: 202 VGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTA 260

Query: 196 PVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVMFCFPNPNK-EIEPVKGL 254
             +P + V+++GD +EI+SNG +KS +HR + N E+ R+S  +FC P  +K  ++P+  +
Sbjct: 261 KCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM 320

Query: 255 VTGTRPRLYK--TMKDY 269
           V+   P  +   T   +
Sbjct: 321 VSVESPAKFPPRTFAQH 337
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query273
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 95.96
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.87
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.45
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 88.76
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 87.14
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 86.26
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 85.65
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 84.46
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 81.71
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.7e-73  Score=504.66  Aligned_cols=268  Identities=32%  Similarity=0.657  Sum_probs=248.2

Q ss_pred             HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCCHHHHhhhhhcC--CCccccccccccCCCcccchhhhc
Q 040624            2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYAREN--GSYDGYMNHIIDSKDQAFDWIDRL   79 (273)
Q Consensus         2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~   79 (273)
                      +++++|++||++ ||||||+||||+.++++++++.+++||+||.|+|+++....  ..++||+........+..||+|.|
T Consensus        65 ~~~~~l~~A~~~-~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~  143 (356)
T 1gp6_A           65 NCIEELKKASLD-WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYF  143 (356)
T ss_dssp             HHHHHHHHHHHH-TSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEE
T ss_pred             HHHHHHHHHHHh-CCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhhee
Confidence            478999999999 99999999999999999999999999999999999997743  468999887655556788999999


Q ss_pred             ccccCCcchhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhhcC--CCccceEEeeeCCCCCC
Q 040624           80 HLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYGE--EASMLSIFNLYPPCPRP  157 (273)
Q Consensus        80 ~~~~~p~~~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~  157 (273)
                      .+...|.+...+|.||+.+|+|++.+++|+++|.+++.+|+++|+++||+++++|.+.+..  .+.+.||++|||+++++
T Consensus       144 ~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~  223 (356)
T 1gp6_A          144 FHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQP  223 (356)
T ss_dssp             EEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSST
T ss_pred             eeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCc
Confidence            8877665445679999999999999999999999999999999999999999999988842  36778999999999988


Q ss_pred             CCccccCcccCCCceEEEeecCCCCceEEeeCCeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCCCCCeeEEE
Q 040624          158 DLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLV  237 (273)
Q Consensus       158 ~~~~~~~~H~D~~~lTll~~d~~~~GLqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~  237 (273)
                      +..+|+++|||+|+||||+|| .++||||+++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++.++|||++
T Consensus       224 ~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia  302 (356)
T 1gp6_A          224 ELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWA  302 (356)
T ss_dssp             TTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEE
T ss_pred             ccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEE
Confidence            888999999999999999999 7999999999999999999999999999999999999999999999998888999999


Q ss_pred             EeecCCCCC-eEecCCCccCCCCCCCCcchh--hhhh
Q 040624          238 MFCFPNPNK-EIEPVKGLVTGTRPRLYKTMK--DYTS  271 (273)
Q Consensus       238 ~F~~P~~~~-~i~p~~~~~~~~~~~~y~~~~--e~~~  271 (273)
                      ||++|+.|+ +|+|+++++++++|++|++++  ||+.
T Consensus       303 ~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~  339 (356)
T 1gp6_A          303 VFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIE  339 (356)
T ss_dssp             EEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHH
T ss_pred             EeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHH
Confidence            999999999 999999999999999999999  9985
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 273
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-54
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-51
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-45
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 7e-33
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  176 bits (447), Expect = 4e-54
 Identities = 87/274 (31%), Positives = 147/274 (53%), Gaps = 9/274 (3%)

Query: 3   FAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYAREN--GSYDG 60
             + L  A    +G + +INHGI    M++V + G++FF L +EEK+KYA +   G   G
Sbjct: 65  CIEELKKASLD-WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 123

Query: 61  YMNHIIDSKDQAFDWIDRLHLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLL 120
           Y + + ++     +W D    +  PE+KR L +WP+ P  + E   EY   +  L   + 
Sbjct: 124 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVF 183

Query: 121 KAIARALNLEENCFLDMYGEEASMLSI--FNLYPPCPRPDLAIGLKPHADASVFTYLIQD 178
           KA++  L LE +      G    +L     N YP CP+P+LA+G++ H D S  T+++ +
Sbjct: 184 KALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 243

Query: 179 KEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLVM 238
             V GLQ   + +W     +P + V+++GD +EI+SNG +KS +HR + N E+ R+S  +
Sbjct: 244 -MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAV 302

Query: 239 FCFPNPNKEI-EPVKGLVTGTRPRLYK--TMKDY 269
           FC P  +K + +P+  +V+   P  +   T   +
Sbjct: 303 FCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQH 336
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query273
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 93.92
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 93.78
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-68  Score=474.04  Aligned_cols=269  Identities=32%  Similarity=0.657  Sum_probs=238.8

Q ss_pred             HHHHHHHHHHhccccEEEEecCCCCHHHHHHHHHHHhhhhCCCHHHHhhhhhc--CCCccccccccccCCCcccchhhhc
Q 040624            2 LFAQRLYSALRALYGAVKIINHGIDPAFMDKVDEVGKQFFGLPLEEKKKYARE--NGSYDGYMNHIIDSKDQAFDWIDRL   79 (273)
Q Consensus         2 ~~~~~l~~A~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~~~Gy~~~~~~~~~~~~d~~e~~   79 (273)
                      +++++|++||++ +|||||+||||+.++++++++++++||+||.|+|+++...  .+.+.||+...........++.+.+
T Consensus        64 ~~~~~l~~A~~~-~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  142 (349)
T d1gp6a_          64 NCIEELKKASLD-WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYF  142 (349)
T ss_dssp             HHHHHHHHHHHH-TSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEE
T ss_pred             HHHHHHHHHHHh-CCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhh
Confidence            578999999999 9999999999999999999999999999999999999762  3345666655444445556666654


Q ss_pred             ccccCCcchhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhHhhhc--CCCccceEEeeeCCCCCC
Q 040624           80 HLVTKPEDKRQLKLWPENPQSFREILHEYTAKIEKLNEMLLKAIARALNLEENCFLDMYG--EEASMLSIFNLYPPCPRP  157 (273)
Q Consensus        80 ~~~~~p~~~~~~n~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~--~~~~~~lr~~~Yp~~~~~  157 (273)
                      .....+.....+|.||+.++.|++.+++|+++|.+++..|+++++++||++++++.+.+.  +...+.||++|||+++.+
T Consensus       143 ~~~~~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~  222 (349)
T d1gp6a_         143 FHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQP  222 (349)
T ss_dssp             EEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSST
T ss_pred             cccccccccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccch
Confidence            443444445577999999999999999999999999999999999999999999887763  234668999999999988


Q ss_pred             CCccccCcccCCCceEEEeecCCCCceEEeeCCeeEECCCCCCeEEEEechhHHHHhCCcccCCCcccccCCCCCeeEEE
Q 040624          158 DLAIGLKPHADASVFTYLIQDKEVEGLQFQKDDQWYRVPVIPGAFVINVGDQIEIMSNGIFKSPIHRVVTNTERGRMSLV  237 (273)
Q Consensus       158 ~~~~~~~~H~D~~~lTll~~d~~~~GLqv~~~g~W~~v~~~~~~~vvnvGd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~  237 (273)
                      ...+|+++|||+|+||||+|+ .++||||..+|+|++|+|.+|++|||+||+|++||||+|+||+|||+.+++++|||++
T Consensus       223 ~~~~g~~~HtD~g~lTlL~q~-~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~  301 (349)
T d1gp6a_         223 ELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWA  301 (349)
T ss_dssp             TTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEE
T ss_pred             hhccccccCCCCcceEEEecc-CCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEE
Confidence            888999999999999999999 8999999999999999999999999999999999999999999999998889999999


Q ss_pred             EeecCCCCCeE-ecCCCccCCCCCCCCcchh--hhhhc
Q 040624          238 MFCFPNPNKEI-EPVKGLVTGTRPRLYKTMK--DYTSI  272 (273)
Q Consensus       238 ~F~~P~~~~~i-~p~~~~~~~~~~~~y~~~~--e~~~~  272 (273)
                      ||++|+.|++| +|+++++++++|++|+||+  ||++.
T Consensus       302 ~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~  339 (349)
T d1gp6a_         302 VFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH  339 (349)
T ss_dssp             EEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHH
T ss_pred             EEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHH
Confidence            99999999865 8999999999999999999  99863
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure