Citrus Sinensis ID: 040637

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450---
MVSLLSFANAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFFT
cccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccEEEcccccccccccccccccccccccHHHHHHHHcHHHHHHHHHcccHHHccccccccccccccHHHHHHHHHccccccccccHHEEEHHcccccccHHHHHHHcccccccEEEEcccHHccccccccccHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEccccccccccccccccccccccccccccccEEcc
ccEEEccccccccHHHcccccHHHHHHHHHccccHHHHHHHcEEEEHHHccHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccHcccccccccHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccEcEEEEEccHHHcHHHccccEEcccHHHHHHHccHHHHHHHHccccEEEEcccEEccEEHHHcHHHHHHHHHccccccccccEEEEEEccccccccccccccccccccccEEEccccccHHHcccccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHcccHHHHHHHHHHHHHHcEEEEEccccccccccccccccEEEEEccccccHHHHHcccccccccccccccccccEEcc
MVSLLSFANaeyakykdpkqRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFlkdysigsvlsgggstplpqasaADWINMINDFQrgslasrlgipmiygidavhghnnvynatifphnvcrdprwgrcyesysEDHKIVQEMTDVILglqgdppsnlrkgvpyvggkdKVAACAKHfvgdggttnginenntvIDMHGLLsihmpaysdsiIKGVSTIMVSYSswngekmhaNRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFvisdwqgidritspphsnytysVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSmglfenplaDLSLVNELGSQAHRDLAREAVRKSLVLLkngkneshpliplpkkapkilvagshadnlgyqcggwtinwqgfsgnnytrgtffft
MVSLLSFANaeyakykdpkqrvaVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVgdggttngiNENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHryntstsdLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLlkngkneshpliplpkKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFFT
MVSLLSFANAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVgdggttnginenntVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKNGKNESHpliplpkkapkilVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFFT
********NAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSG***********ADWINMI************GIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLK********LIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFF*
MVSL***ANAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFFT
MVSLLSFANAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFFT
MVSLLSFANAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFFT
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ooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVSLLSFANAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFFFT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query453 2.2.26 [Sep-21-2011]
Q23892 821 Lysosomal beta glucosidas yes no 0.843 0.465 0.282 5e-42
Q56078 765 Periplasmic beta-glucosid yes no 0.783 0.464 0.267 5e-28
P33363 765 Periplasmic beta-glucosid N/A no 0.785 0.465 0.259 2e-26
Q9FGY1 774 Beta-D-xylosidase 1 OS=Ar no no 0.763 0.447 0.258 5e-20
Q5BCC6 618 Beta-glucosidase C OS=Eme no no 0.741 0.543 0.241 9e-20
A5JTQ3 774 Beta-xylosidase/alpha-L-a N/A no 0.770 0.450 0.262 2e-19
Q2UFP8 638 Probable beta-glucosidase no no 0.827 0.587 0.246 9e-18
Q9FLG1 784 Beta-D-xylosidase 4 OS=Ar no no 0.772 0.446 0.248 3e-17
B8NGU6 634 Probable beta-glucosidase N/A no 0.805 0.575 0.239 2e-16
Q9LXD6 773 Beta-D-xylosidase 3 OS=Ar no no 0.770 0.451 0.252 3e-16
>sp|Q23892|GLUA_DICDI Lysosomal beta glucosidase OS=Dictyostelium discoideum GN=gluA PE=1 SV=2 Back     alignment and function desciption
 Score =  172 bits (436), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 222/495 (44%), Gaps = 113/495 (22%)

Query: 26  VKDLLGRMSLEEKIGQMVQIDRTIAT------------VQFLKDYSIGSVL----SGGGS 69
           V +L+ +MS+ EKIGQM Q+D T  T              + K Y IGS L    SGG +
Sbjct: 80  VDNLMSKMSITEKIGQMTQLDITTLTSPNTITINETTLAYYAKTYYIGSYLNSPVSGGLA 139

Query: 70  TPLPQASAADWINMINDFQRGSL-ASRLGIPMIYGIDAVHGHNNVYNATIFPHN------ 122
             +   +++ W++MIN  Q   +  S   IPMIYG+D+VHG N V+ AT+FPHN      
Sbjct: 140 GDIHHINSSVWLDMINTIQTIVIEGSPNKIPMIYGLDSVHGANYVHKATLFPHNTGLAAT 199

Query: 123 -------------------------------VCRDPRWGRCYESYSEDHKIVQEM-TDVI 150
                                          +   P W R YE++ ED  +   M    +
Sbjct: 200 FNIEHATTAAQITSKDTVAVGIPWVFAPVLGIGVQPLWSRIYETFGEDPYVASMMGAAAV 259

Query: 151 LGLQG-----DPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLS 205
            G QG     D P N    V            AKH+ G    T+G +     I    L  
Sbjct: 260 RGFQGGNNSFDGPINAPSAV----------CTAKHYFGYSDPTSGKDRTAAWIPERMLRR 309

Query: 206 IHMPAYSDSII-KGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHR 264
             +P+++++I   G  TIM++    NG  MH + + +T  L+G L+F             
Sbjct: 310 YFLPSFAEAITGAGAGTIMINSGEVNGVPMHTSYKYLTEVLRGELQF------------- 356

Query: 265 YNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHS--NYTYSVQSGIQAGIDMVMIP 322
                             EG  ++DWQ I+++    H+  +   ++   + AGIDM M+P
Sbjct: 357 ------------------EGVAVTDWQDIEKLVYFHHTAGSAEEAILQALDAGIDMSMVP 398

Query: 323 FNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPL--ADLSLVNELGSQA 380
            +L+ F   L ++V    +   R+D +V RIL +K+++GLF NP    + ++V+ +G   
Sbjct: 399 LDLS-FPIILAEMVAAGTVPESRLDLSVRRILNLKYALGLFSNPYPNPNAAIVDTIGQVQ 457

Query: 381 HRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPK-ILVAGSHADNLGYQCGGWTINWQG 439
            R+ A     +S+ LL+N  N    ++PL     K +L+ G  AD++    GGW+++WQG
Sbjct: 458 DREAAAATAEESITLLQNKNN----ILPLNTNTIKNVLLTGPSADSIRNLNGGWSVHWQG 513

Query: 440 -FSGNNYTRGTFFFT 453
            +  + +  GT   T
Sbjct: 514 AYEDSEFPFGTSILT 528

Dictyostelium discoideum (taxid: 44689)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 1
>sp|Q56078|BGLX_SALTY Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=bglX PE=3 SV=2 Back     alignment and function description
>sp|P33363|BGLX_ECOLI Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) GN=bglX PE=1 SV=2 Back     alignment and function description
>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 Back     alignment and function description
>sp|Q5BCC6|BGLC_EMENI Beta-glucosidase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bglC PE=1 SV=1 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|Q2UFP8|BGLC_ASPOR Probable beta-glucosidase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=bglC PE=3 SV=2 Back     alignment and function description
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function description
>sp|B8NGU6|BGLC_ASPFN Probable beta-glucosidase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=bglC PE=3 SV=1 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
255546789 648 Periplasmic beta-glucosidase precursor, 0.913 0.638 0.726 0.0
225463713 658 PREDICTED: lysosomal beta glucosidase-li 0.913 0.629 0.715 0.0
356533037 662 PREDICTED: lysosomal beta glucosidase-li 0.916 0.626 0.697 0.0
356555871 661 PREDICTED: lysosomal beta glucosidase-li 0.900 0.617 0.705 0.0
297806471 668 glycosyl hydrolase family 3 protein [Ara 0.907 0.615 0.672 0.0
449493415 658 PREDICTED: LOW QUALITY PROTEIN: lysosoma 0.911 0.627 0.690 0.0
30680681 665 Glycosyl hydrolase family protein [Arabi 0.922 0.628 0.659 0.0
449434540 658 PREDICTED: lysosomal beta glucosidase-li 0.911 0.627 0.690 0.0
296084436 619 unnamed protein product [Vitis vinifera] 0.852 0.623 0.715 0.0
357448467 660 Beta-D-glucosidase [Medicago truncatula] 0.916 0.628 0.674 0.0
>gi|255546789|ref|XP_002514453.1| Periplasmic beta-glucosidase precursor, putative [Ricinus communis] gi|223546449|gb|EEF47949.1| Periplasmic beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/482 (72%), Positives = 375/482 (77%), Gaps = 68/482 (14%)

Query: 5   LSFANAEYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVL 64
           ++   AEY KYKDPKQ V  RVKDL+ RM+LEEKI QMVQIDR IA+   LK YSIGSVL
Sbjct: 16  IAMVEAEYVKYKDPKQPVGARVKDLMKRMTLEEKIAQMVQIDRLIASPDILKTYSIGSVL 75

Query: 65  SGGGSTPLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHN-- 122
           SGGGS PL +ASA DW+NMIN FQ GSL+SRLGIPMIYGIDAVHGHNNVYNATIFPHN  
Sbjct: 76  SGGGSAPLHEASAEDWVNMINGFQNGSLSSRLGIPMIYGIDAVHGHNNVYNATIFPHNIG 135

Query: 123 -----------------------------------VCRDPRWGRCYESYSEDHKIVQEMT 147
                                              VCRDPRWGRCYESYSEDH +V+EMT
Sbjct: 136 LGATRDPNLVKRIGSATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHNVVEEMT 195

Query: 148 DVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIH 207
           +++LGLQGD P+  RKGVPYVGGK KVAACAKHFVGDGGTT GINENNTVIDMHGLLS+H
Sbjct: 196 EIVLGLQGDIPAKSRKGVPYVGGKKKVAACAKHFVGDGGTTKGINENNTVIDMHGLLSMH 255

Query: 208 MPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNT 267
           MPAYSDSIIKGVSTIMVSYSSWNGEKMH NREL+TGFLK TLKFK               
Sbjct: 256 MPAYSDSIIKGVSTIMVSYSSWNGEKMHGNRELITGFLKDTLKFK--------------- 300

Query: 268 STSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTE 327
                           GFVISDWQGIDRITSPPH+NY+YSVQ+ IQAGIDMVM+PFN TE
Sbjct: 301 ----------------GFVISDWQGIDRITSPPHANYSYSVQAAIQAGIDMVMVPFNYTE 344

Query: 328 FIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLARE 387
           F DDL  LVKN VI MDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQ HRDLARE
Sbjct: 345 FSDDLIYLVKNKVIPMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQEHRDLARE 404

Query: 388 AVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTR 447
           AVRKSLVLLKNGKN + PL+PLPKKA K+LVAG+HADNLGYQCGGWTI WQGF+GNNYTR
Sbjct: 405 AVRKSLVLLKNGKNGTDPLLPLPKKASKVLVAGTHADNLGYQCGGWTIEWQGFNGNNYTR 464

Query: 448 GT 449
           GT
Sbjct: 465 GT 466

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225463713|ref|XP_002262992.1| PREDICTED: lysosomal beta glucosidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356533037|ref|XP_003535075.1| PREDICTED: lysosomal beta glucosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356555871|ref|XP_003546253.1| PREDICTED: lysosomal beta glucosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|297806471|ref|XP_002871119.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] gi|297316956|gb|EFH47378.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449493415|ref|XP_004159282.1| PREDICTED: LOW QUALITY PROTEIN: lysosomal beta glucosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|30680681|ref|NP_680141.2| Glycosyl hydrolase family protein [Arabidopsis thaliana] gi|110738527|dbj|BAF01189.1| hypothetical protein [Arabidopsis thaliana] gi|332003416|gb|AED90799.1| Glycosyl hydrolase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449434540|ref|XP_004135054.1| PREDICTED: lysosomal beta glucosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296084436|emb|CBI24995.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357448467|ref|XP_003594509.1| Beta-D-glucosidase [Medicago truncatula] gi|355483557|gb|AES64760.1| Beta-D-glucosidase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
TAIR|locus:504954860 665 AT5G04885 [Arabidopsis thalian 0.408 0.278 0.661 1.2e-165
TAIR|locus:2147102 626 AT5G20940 [Arabidopsis thalian 0.366 0.265 0.602 1e-133
TAIR|locus:2075621 608 AT3G47000 [Arabidopsis thalian 0.366 0.273 0.538 1.9e-112
TAIR|locus:2075636 609 AT3G47010 [Arabidopsis thalian 0.366 0.272 0.538 1.5e-106
TAIR|locus:2075571 612 AT3G47050 [Arabidopsis thalian 0.386 0.285 0.522 1e-105
TAIR|locus:2081605 650 AT3G62710 [Arabidopsis thalian 0.353 0.246 0.565 9.1e-101
TAIR|locus:2147117 624 AT5G20950 [Arabidopsis thalian 0.366 0.266 0.650 1.6e-98
TIGR_CMR|CPS_3740 599 CPS_3740 "putative endoglucana 0.335 0.253 0.420 8.7e-62
TIGR_CMR|CPS_3725 605 CPS_3725 "glycosyl hydrolase, 0.342 0.256 0.429 6.1e-59
DICTYBASE|DDB_G0292810 821 gluA "beta glucosidase" [Dicty 0.406 0.224 0.290 7.3e-33
TAIR|locus:504954860 AT5G04885 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 626 (225.4 bits), Expect = 1.2e-165, Sum P(3) = 1.2e-165
 Identities = 123/186 (66%), Positives = 146/186 (78%)

Query:   264 RYNTSTSDLRRILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPF 323
             + + +T  +   L  T   +GFVISDWQG+D+I++PPH++YT SV++ IQAGIDMVM+PF
Sbjct:   285 KMHANTELITGYLKGTLKFKGFVISDWQGVDKISTPPHTHYTASVRAAIQAGIDMVMVPF 344

Query:   324 NLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRD 383
             N TEF++DLT LVKNN I + RIDDAV RILLVKF+MGLFENPLAD S  +ELGSQAHRD
Sbjct:   345 NFTEFVNDLTTLVKNNSIPVTRIDDAVRRILLVKFTMGLFENPLADYSFSSELGSQAHRD 404

Query:   384 LAREAVRKSLVLLKNGKNESHXXXXXXXXXXXXXVAGSHADNLGYQCGGWTINWQGFSGN 443
             LAREAVRKSLVLLKNG N+++             VAG+HADNLGYQCGGWTI WQGFSGN
Sbjct:   405 LAREAVRKSLVLLKNG-NKTNPMLPLPRKTSKILVAGTHADNLGYQCGGWTITWQGFSGN 463

Query:   444 NYTRGT 449
               TRGT
Sbjct:   464 KNTRGT 469
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2147102 AT5G20940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075621 AT3G47000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075636 AT3G47010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075571 AT3G47050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081605 AT3G62710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2147117 AT5G20950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3740 CPS_3740 "putative endoglucanase A" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3725 CPS_3725 "glycosyl hydrolase, family 3" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292810 gluA "beta glucosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 1e-61
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 2e-59
PRK15098 765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 1e-42
PLN03080 779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 4e-15
pfam01915 221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 3e-07
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information 
 Score =  204 bits (522), Expect = 1e-61
 Identities = 121/448 (27%), Positives = 175/448 (39%), Gaps = 118/448 (26%)

Query: 33  MSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSL 92
           M+LEEK+GQ+         ++   + +        G   L   +  D    +        
Sbjct: 1   MTLEEKVGQLGIAG-----LELTPEEAARLADPLVGGIILFGRNIDDREQ-LRALVAAIR 54

Query: 93  ASRLGIPMIYGIDAVHGHNNV--YNATIFPHN---------------------------- 122
            +RLGIP++  ID   G         T+FP                              
Sbjct: 55  EARLGIPLLIAIDQEGGRVQRLREGFTVFPAALALAATWDPELARKVGRVIAKELRALGI 114

Query: 123 ---------VCRDPRWGRCYE-SYSEDHKIVQEMTD-VILGLQGDPPSNLRKGVPYVGGK 171
                    V RDPRWGR  E S+ ED ++V  +    I GLQG                
Sbjct: 115 NLDFAPVLDVARDPRWGRIGERSFGEDPELVALLAAAFIKGLQGA--------------- 159

Query: 172 DKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKG---VSTIMVSYSS 228
             VAA  KHF G G      +     ID   L  +++P +  +I  G     T  V+Y  
Sbjct: 160 -GVAATIKHFPGHGAVEGDSHYGLLPIDPRALRELYLPPFQPAIALGDDAAMTAHVAYPK 218

Query: 229 WNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVIS 288
            +G     +R+L+T  L+    F                                G VIS
Sbjct: 219 IDGTPATLSRKLLTDILRDEWGFD-------------------------------GVVIS 247

Query: 289 DWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDD 348
           D   +  I +   S    +  + ++AG+D+V++   L E    + +LV    ++  R+DD
Sbjct: 248 DDLSMKAIAAAHGSAADRAEAA-LKAGVDIVLVCNELYEAYLVVLELVG---LSEARLDD 303

Query: 349 AVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIP 408
           AV RIL VKF +GLFENP +            HR LAREA R+S+VLLKN       L+P
Sbjct: 304 AVRRILRVKFKLGLFENPYSS----------EHRALAREAARESIVLLKN----DGGLLP 349

Query: 409 LPKKAPKILVAGSHADNLGYQCGGWTIN 436
           L K A +I V G +AD+     GGW++ 
Sbjct: 350 LKKSAKRIAVIGPYADDGD---GGWSVG 374

Length = 397
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 453
PRK15098 765 beta-D-glucoside glucohydrolase; Provisional 100.0
PLN03080 779 Probable beta-xylosidase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.7e-73  Score=626.90  Aligned_cols=351  Identities=33%  Similarity=0.539  Sum_probs=299.9

Q ss_pred             CCCHHHHHHHHHhcCCHHHHHhcccCcccch-----hhHHhhhcCCcceEEeCCCCCCCCCCCHHHHHHHHHHHHHHhh-
Q 040637           19 KQRVAVRVKDLLGRMSLEEKIGQMVQIDRTI-----ATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSL-   92 (453)
Q Consensus        19 ~~~~~~rv~~ll~~MTleEKigQl~~~~~~~-----~~~~~l~~~~iGgv~~~~~~~p~~~~~~~~~~~~i~~~q~~a~-   92 (453)
                      ..+.++|+++++++||+|||||||++++..+     ...+.++++++|+|+..        .++++    ++.+|+.+. 
T Consensus        31 ~~~~~~~v~~ll~~MtleEKvgQl~~~~~~~~~~~~~~~~~i~~~~vGgv~n~--------~~~~~----~~~lq~~~~~   98 (765)
T PRK15098         31 PEARDAFVTDLLKKMTLDEKIGQLRLISVGPDNPKEAIREMIKAGQVGAIFNT--------VTRQD----IRAMQDQVMQ   98 (765)
T ss_pred             CcCHHHHHHHHHHcCCHHHHHhhhcccccCCCCchHHHHHHHHhCCcceEEcC--------cCHHH----HHHHHHHHhh
Confidence            3578999999999999999999999875322     34567899999999622        23333    456676655 


Q ss_pred             hhccCCCcEEEeecCCCcccccccccCCcc-------------------------------------ccCCCCccccCcc
Q 040637           93 ASRLGIPMIYGIDAVHGHNNVYNATIFPHN-------------------------------------VCRDPRWGRCYES  135 (453)
Q Consensus        93 ~~~~~iP~~~~~D~e~G~~~~~~~t~fP~~-------------------------------------v~rdp~~GR~~es  135 (453)
                      .++++||+++++|+|||.+     |.||++                                     +.|||+|||++||
T Consensus        99 ~~~~giP~li~~D~e~G~~-----t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gin~~laPv~Dv~r~p~~gr~~rs  173 (765)
T PRK15098         99 LSRLKIPLFFAYDVVHGQR-----TVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEG  173 (765)
T ss_pred             CCCCCCCeeEEEeCCCCcc-----ccCChHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCEEeeCcccccCCCCccccccC
Confidence            4788999999999999973     667766                                     7999999999999


Q ss_pred             CCCCHHHHHHHHH-HHhhccCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHh
Q 040637          136 YSEDHKIVQEMTD-VILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDS  214 (453)
Q Consensus       136 fgeDp~lv~~~~~-~i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~  214 (453)
                      |||||++|++|+. +|+|||+.+..+          +.||++|+|||||||.++.++|.....+++++|++.||+||+++
T Consensus       174 fgeDP~lv~~~~~a~v~GlQ~~~~~~----------~~gV~a~~KHFpG~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~a  243 (765)
T PRK15098        174 FGEDTYLTSIMGKTMVKAMQGKSPAD----------RYSVMTSVKHFALYGAVEGGRDYNTVDMSPQRMFNDYLPPYKAG  243 (765)
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCCCCC----------CCCEEEECcEEeCCCCcccCccCccCcCCHHHHHHHHHHHHHHH
Confidence            9999999999999 999999732211          25999999999999998888888777789999999999999999


Q ss_pred             hhcCCceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccc
Q 040637          215 IIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGID  294 (453)
Q Consensus       215 i~~g~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~  294 (453)
                      |++|+.+|||||+++||+|+|+|+++|+++||++|||+                               |+|||||++|.
T Consensus       244 i~ag~~~VM~sy~~~~g~pa~~s~~ll~~lLR~e~GF~-------------------------------G~VvSD~~a~~  292 (765)
T PRK15098        244 LDAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFK-------------------------------GITVSDHGAIK  292 (765)
T ss_pred             HHhCCCEEEecccCcCCEeccCCHHHHHHHHHHhcCCC-------------------------------cEEEecchhHH
Confidence            99999999999999999999999999999999999999                               99999999999


Q ss_pred             cccCCC-CCChhHHHHHHHHcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhCCCCCCCCCchh-
Q 040637          295 RITSPP-HSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSL-  372 (453)
Q Consensus       295 ~i~~~~-~~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~~Glf~~p~~~~~~-  372 (453)
                      .+..+. ..+..++++.||+||+||+|.+.   .+.+.|.++|++|.|++++||+||+|||++|+++|||++||.+... 
T Consensus       293 ~l~~~~~~~~~~ea~~~Al~AG~Dl~m~~~---~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~~glf~~p~~~~~~~  369 (765)
T PRK15098        293 ELIKHGVAADPEDAVRLALKSGIDMSMSDE---YYSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDPYSHLGPK  369 (765)
T ss_pred             HHHhcccCCCHHHHHHHHHHcCCCcccCch---hHHHHHHHHHHcCcCCHHHHHHHHHHHHHHHHHhCCCCCCccccccc
Confidence            876421 13567899999999999998643   2345689999999999999999999999999999999999854321 


Q ss_pred             -----hhhcccHHHHHHHHHHHHhceEEeecCCCCCCCCCCCCCCCCeEEEEccCCCcccccccCCcc
Q 040637          373 -----VNELGSQAHRDLAREAVRKSLVLLKNGKNESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTI  435 (453)
Q Consensus       373 -----~~~~~~~~h~~la~~~a~~SivLLKN~~~~~~~~LPL~~~~~kIaViG~~a~~~~~~~gg~t~  435 (453)
                           ...+.+++|+++|+++|++|||||||    ++++|||+++ +||+|+||+|++...++|||+.
T Consensus       370 ~~~~~~~~~~~~~~~~~a~~~a~~sivLLKN----~~~~LPL~~~-~~IaviG~~a~~~~~~~G~~s~  432 (765)
T PRK15098        370 ESDPVDTNAESRLHRKEAREVARESLVLLKN----RLETLPLKKS-GTIAVVGPLADSQRDVMGSWSA  432 (765)
T ss_pred             cccccccccCCHHHHHHHHHHHHhcEEEEec----CCCCCCCCCC-CEEEEECCCcccccccCCCccc
Confidence                 12345789999999999999999999    6679999865 6999999999998778999873

>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
1lq2_A 602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 1e-138
1ex1_A 605 Beta-D-Glucan Exohydrolase From Barley Length = 605 1e-138
3usz_A 822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 7e-61
3rrx_A 822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 7e-61
2x40_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 1e-07
2x42_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 9e-07
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 2e-05
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 6e-05
4i8d_A 714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 9e-04
3zyz_A 713 Crystal Structure Of A Glycoside Hydrolase Family 3 9e-04
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure 
Iteration: 1

 Score =  488 bits (1257), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 250/470 (53%), Positives = 301/470 (64%), Gaps = 69/470 (14%)
Query: 11  EYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGST 70
           +Y  YKD  + V  RV DLLGRM+L EKIGQM QI+R +AT   L+D  IGS+LSGGGS 
Sbjct: 1   DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSV 60
Query: 71  PLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHNV------- 123
           P   A+A +W +M++ FQ+  +++RLGIPMIYGIDAVHG NNVY ATIFPHNV       
Sbjct: 61  PRKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRD 120
Query: 124 ------------------------------CRDPRWGRCYESYSEDHKIVQEMTDVILGL 153
                                         CRDPRWGRCYESYSED +IVQ MT++I GL
Sbjct: 121 PYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGL 180
Query: 154 QGDPPSNLRKGVPYVGGKDKVAACAKHFVXXXXXXXXXXXXXXVIDMHGLLSIHMPAYSD 213
           QGD P +   G+P+V GK+KVAACAKHFV              +I+  GL++IHMPAY +
Sbjct: 181 QGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN 240
Query: 214 SIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLR 273
           ++ KGVST+M+SYSSWNG KMHAN++LVTG+LK TLKFK                     
Sbjct: 241 AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFK--------------------- 279
Query: 274 RILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLT 333
                     GFVISDW+GIDRIT+P  S+Y+YSV++ I AG+DM+M+P    +FI  LT
Sbjct: 280 ----------GFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILT 329
Query: 334 DLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSL 393
             V   VI M RIDDAV RIL VKF+MGLFENP AD ++  +LG Q HRDLAREA RKSL
Sbjct: 330 GHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSL 389
Query: 394 VLLKNGKNESHXXXXXXXXXXXX-XVAGSHADNLGYQCGGWTINWQGFSG 442
           VLLKNGK  +               VAGSHADNLGYQCGGWTI WQG +G
Sbjct: 390 VLLKNGKTSTDAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTG 439
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
1x38_A 602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 0.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 1e-176
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 7e-73
3bmx_A 642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 3e-48
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 4e-43
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 7e-34
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 3e-06
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
 Score =  587 bits (1516), Expect = 0.0
 Identities = 274/472 (58%), Positives = 326/472 (69%), Gaps = 69/472 (14%)

Query: 11  EYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGST 70
           +Y  YKD  + V  RV DLLGRM+L EKIGQM QI+R +AT   L+D  IGS+LSGGGS 
Sbjct: 1   DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSV 60

Query: 71  PLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPHN-------- 122
           P   A+A +W +M++ FQ+  +++RLGIPMIYGIDAVHG NNVY ATIFPHN        
Sbjct: 61  PRKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRD 120

Query: 123 -----------------------------VCRDPRWGRCYESYSEDHKIVQEMTDVILGL 153
                                        VCRDPRWGRCYESYSED +IVQ MT++I GL
Sbjct: 121 PYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGL 180

Query: 154 QGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSD 213
           QGD P +   G+P+V GK+KVAACAKHFVGDGGT +GINENNT+I+  GL++IHMPAY +
Sbjct: 181 QGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN 240

Query: 214 SIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLR 273
           ++ KGVST+M+SYSSWNG KMHAN++LVTG+LK TLKFK                     
Sbjct: 241 AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFK--------------------- 279

Query: 274 RILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLT 333
                     GFVISDW+GIDRIT+P  S+Y+YSV++ I AG+DM+M+P    +FI  LT
Sbjct: 280 ----------GFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILT 329

Query: 334 DLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKSL 393
             V   VI M RIDDAV RIL VKF+MGLFENP AD ++  +LG Q HRDLAREA RKSL
Sbjct: 330 GHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSL 389

Query: 394 VLLKNGKN-ESHPLIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNN 444
           VLLKNGK     PL+PLPKKAPKILVAGSHADNLGYQCGGWTI WQG +G  
Sbjct: 390 VLLKNGKTSTDAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGRT 441
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query453
1x38_A 602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
3bmx_A 642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
3zyz_A 713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 100.0
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 100.0
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
Probab=100.00  E-value=1.9e-89  Score=742.34  Aligned_cols=403  Identities=68%  Similarity=1.140  Sum_probs=364.1

Q ss_pred             CCCCCCCCHHHHHHHHHhcCCHHHHHhcccCcccchhhHHhhhcCCcceEEeCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 040637           14 KYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSLA   93 (453)
Q Consensus        14 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~l~~~~iGgv~~~~~~~p~~~~~~~~~~~~i~~~q~~a~~   93 (453)
                      ||+|+++++++||++|+++||+|||||||+++.......+.++++++|++++++++.+.+..++++|.++++++|+.+..
T Consensus         4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~   83 (602)
T 1x38_A            4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS   83 (602)
T ss_dssp             GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999999987655556788999999999998887788888999999999999999888


Q ss_pred             hccCCCcEEEeecCCCcccccccccCCcc-------------------------------------ccCCCCccccCccC
Q 040637           94 SRLGIPMIYGIDAVHGHNNVYNATIFPHN-------------------------------------VCRDPRWGRCYESY  136 (453)
Q Consensus        94 ~~~~iP~~~~~D~e~G~~~~~~~t~fP~~-------------------------------------v~rdp~~GR~~esf  136 (453)
                      +|++||+++++|+|||.+++.+.|.||++                                     +.|||+|||++|||
T Consensus        84 ~rlgiP~l~~~D~~~G~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aP~vdv~r~p~~GR~~esf  163 (602)
T 1x38_A           84 TRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESY  163 (602)
T ss_dssp             SSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGGGSS
T ss_pred             ccCCCCcEEEEcCCCceeCCCCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHcCCCEEeeceeccccCCCcCccccCc
Confidence            99999999999999999888889999987                                     68999999999999


Q ss_pred             CCCHHHHHHHHHHHhhccCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhhh
Q 040637          137 SEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSII  216 (453)
Q Consensus       137 geDp~lv~~~~~~i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i~  216 (453)
                      ||||++|++|+.||+|+|++.+.....|.+|+.+..||++|+|||||||+++.|+|...+.+++++|+++||+||+.+|+
T Consensus       164 geDP~lv~~~a~~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~  243 (602)
T 1x38_A          164 SEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMD  243 (602)
T ss_dssp             CSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhcCCCccccccccccccccCCeEEEeccccCCCccccCcccccCcCCHHHHHHHHHHHHHHHHH
Confidence            99999999997799999985432222333343333599999999999999998888888889999999999999999999


Q ss_pred             cCCceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeeccccccc
Q 040637          217 KGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDRI  296 (453)
Q Consensus       217 ~g~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~i  296 (453)
                      +|+.+|||||+.+||+|+|+|+++|+++||+||||+                               |+|||||++|.++
T Consensus       244 ag~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~-------------------------------G~VvSD~~~~~~~  292 (602)
T 1x38_A          244 KGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFK-------------------------------GFVISDWEGIDRI  292 (602)
T ss_dssp             TTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCC-------------------------------SEEECCTTTTGGG
T ss_pred             cCCCEEEecccccCCccccCCHHHHHHHhhcccCCC-------------------------------eEEEccchHHHHH
Confidence            999999999999999999999999999999999999                               9999999999999


Q ss_pred             cCCCCCChhHHHHHHHHcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhCCCCCCCCCchhhhhc
Q 040637          297 TSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNEL  376 (453)
Q Consensus       297 ~~~~~~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~~Glf~~p~~~~~~~~~~  376 (453)
                      ...++.++.++++.|++||+||+|+|.+...+.+.|.+||++|.|+++|||+||+|||++|+++|+|++|+.+......+
T Consensus       293 ~~~~~~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~~p~~~~~~~~~~  372 (602)
T 1x38_A          293 TTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQL  372 (602)
T ss_dssp             SSSTTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGT
T ss_pred             HhhcCCCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCcchhhcc
Confidence            87666677899999999999999998888788899999999999999999999999999999999999998776544578


Q ss_pred             ccHHHHHHHHHHHHhceEEeecCCCCCC--C---CCCCCCCCCeEEEEccCCCcccccccCCccccccCCCCCCCccccc
Q 040637          377 GSQAHRDLAREAVRKSLVLLKNGKNESH--P---LIPLPKKAPKILVAGSHADNLGYQCGGWTINWQGFSGNNYTRGTFF  451 (453)
Q Consensus       377 ~~~~h~~la~~~a~~SivLLKN~~~~~~--~---~LPL~~~~~kIaViG~~a~~~~~~~gg~t~~~~g~~~~~~~~g~~~  451 (453)
                      ++++|+++|+++|+||||||||    ++  +   +|||+++.+||+|+||+|++.+.++|||+..|+|.+++ +.+++|+
T Consensus       373 ~~~~~~~la~~~a~~sivLLKN----~~~~~~~~~LPL~~~~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~-~~~~~t~  447 (602)
T 1x38_A          373 GKQEHRDLAREAARKSLVLLKN----GKTSTDAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGR-TTVGTTI  447 (602)
T ss_dssp             TCHHHHHHHHHHHHHHCEEEEE----CSSTTSCCCCSCCSCCSEEEEESTTTTCHHHHHCSSSSSTTCCSSC-CSSCBCH
T ss_pred             CCHHHHHHHHHHHHhceEEecc----CCCCCcccccccCCCCCEEEEEcCCCccccccCCcceeeccCCCCC-CCCcccH
Confidence            9999999999999999999999    44  3   99998656799999999999989999999999998765 5566666


Q ss_pred             c
Q 040637          452 F  452 (453)
Q Consensus       452 ~  452 (453)
                      +
T Consensus       448 ~  448 (602)
T 1x38_A          448 L  448 (602)
T ss_dssp             H
T ss_pred             H
Confidence            4
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 453
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 2e-95
d1x38a2 214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 1e-14
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 1e-08
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  291 bits (744), Expect = 2e-95
 Identities = 230/419 (54%), Positives = 281/419 (67%), Gaps = 68/419 (16%)

Query: 11  EYAKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGST 70
           +Y  YKD  + V  RV DLLGRM+L EKIGQM QI+R +AT   L+D  IGS+LSGGGS 
Sbjct: 1   DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSV 60

Query: 71  PLPQASAADWINMINDFQRGSLASRLGIPMIYGIDAVHGHNNVYNATIFPH--------- 121
           P   A+A +W +M++ FQ+  +++RLGIPMIYGIDAVHG NNVY ATIFPH         
Sbjct: 61  PRKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRD 120

Query: 122 ----------------------------NVCRDPRWGRCYESYSEDHKIVQEMTDVILGL 153
                                        VCRDPRWGRCYESYSED +IVQ MT++I GL
Sbjct: 121 PYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGL 180

Query: 154 QGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSD 213
           QGD P +   G+P+V GK+KVAACAKHFVGDGGT +GINENNT+I+  GL++IHMPAY +
Sbjct: 181 QGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN 240

Query: 214 SIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLR 273
           ++ KGVST+M+SYSSWNG KMHAN++LVTG+LK TLKF                      
Sbjct: 241 AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKF---------------------- 278

Query: 274 RILTLTKILEGFVISDWQGIDRITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLT 333
                    +GFVISDW+GIDRIT+P  S+Y+YSV++ I AG+DM+M+P    +FI  LT
Sbjct: 279 ---------KGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILT 329

Query: 334 DLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNELGSQAHRDLAREAVRKS 392
             V   VI M RIDDAV RIL VKF+MGLFENP AD ++  +LG Q HRDLAREA RKS
Sbjct: 330 GHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS 388
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query453
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2 214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 98.61
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=1.2e-78  Score=623.08  Aligned_cols=349  Identities=66%  Similarity=1.115  Sum_probs=326.8

Q ss_pred             CCCCCCCCCHHHHHHHHHhcCCHHHHHhcccCcccchhhHHhhhcCCcceEEeCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 040637           13 AKYKDPKQRVAVRVKDLLGRMSLEEKIGQMVQIDRTIATVQFLKDYSIGSVLSGGGSTPLPQASAADWINMINDFQRGSL   92 (453)
Q Consensus        13 ~~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~l~~~~iGgv~~~~~~~p~~~~~~~~~~~~i~~~q~~a~   92 (453)
                      +.|+||++|+++||++|+++||+|||||||+++.......+.++++++|+++.+++..++...++.+|.++++.+|+.+.
T Consensus         3 ~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~~   82 (388)
T d1x38a1           3 VLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACM   82 (388)
T ss_dssp             CGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHHH
Confidence            44999999999999999999999999999999877777778899999999999888888888899999999999999998


Q ss_pred             hhccCCCcEEEeecCCCcccccccccCCcc-------------------------------------ccCCCCccccCcc
Q 040637           93 ASRLGIPMIYGIDAVHGHNNVYNATIFPHN-------------------------------------VCRDPRWGRCYES  135 (453)
Q Consensus        93 ~~~~~iP~~~~~D~e~G~~~~~~~t~fP~~-------------------------------------v~rdp~~GR~~es  135 (453)
                      .++++||+++++|+|+|.+++.+.|.||++                                     +.|||+|||++||
T Consensus        83 ~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv~~~p~~gr~~et  162 (388)
T d1x38a1          83 STRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYES  162 (388)
T ss_dssp             TSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGGGS
T ss_pred             hccCCCCceeecccccCcccccccccchhhhhccccCCHHHHHHHHHHhhHHHHhcCCccccCCcccccccccccccccC
Confidence            899999999999999999888889999987                                     6899999999999


Q ss_pred             CCCCHHHHHHHHHHHhhccCCCCCCCCCCccccCCCCceeeeecccccCCCcccCCcCCCCccChhHHHhccChhhHHhh
Q 040637          136 YSEDHKIVQEMTDVILGLQGDPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSI  215 (453)
Q Consensus       136 fgeDp~lv~~~~~~i~Glq~~~~~~~~~~~~~~~g~~gV~a~~KHFpG~g~~~~~~~~~~~~v~~~~l~~~~l~pF~~~i  215 (453)
                      |||||+++++|+.+|.++|+.....+.+|.+...+++||++|+|||||||.++.++|...++++.++|++.||+||+.+|
T Consensus       163 ~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l~~~~l~pf~~~i  242 (388)
T d1x38a1         163 YSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAM  242 (388)
T ss_dssp             SCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHHH
T ss_pred             ccCCHHHHHHHHhhhhhhhchhhhhhcccccccccccCcceeeeeeecCCccccCccccccchhHHHHHHHhhhhhHHHH
Confidence            99999999999779999999877777777776666789999999999999999999998888999999999999999999


Q ss_pred             hcCCceEEEeccCCCCccccCCHHHHHHHHhhhcCCccccceeeeeecccccCchhHHHHhhhhccccceEEeecccccc
Q 040637          216 IKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKVTFHFVFFILHRYNTSTSDLRRILTLTKILEGFVISDWQGIDR  295 (453)
Q Consensus       216 ~~g~~~iM~sy~~ing~pa~~s~~ll~~~LR~~lgF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ViSD~~~m~~  295 (453)
                      ++|+.+|||||+.+||+|+|.|+++++++||++|||+                               |+|||||++|++
T Consensus       243 ~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~-------------------------------G~VvSD~~~m~~  291 (388)
T d1x38a1         243 DKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFK-------------------------------GFVISDWEGIDR  291 (388)
T ss_dssp             HTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCC-------------------------------SEEECCTTTTGG
T ss_pred             hhccccccccccccCCccccCCHHHHHHHHHhccCCC-------------------------------ceeecchhhccc
Confidence            9999999999999999999999999999999999999                               999999999999


Q ss_pred             ccCCCCCChhHHHHHHHHcCCceeccCCChhhhHHHHHHHHhcCCCcHHHHHHHhhHHHHHHHHhCCCCCCCCCchhhhh
Q 040637          296 ITSPPHSNYTYSVQSGIQAGIDMVMIPFNLTEFIDDLTDLVKNNVITMDRIDDAVGRILLVKFSMGLFENPLADLSLVNE  375 (453)
Q Consensus       296 i~~~~~~~~~~~~~~ai~AG~D~~~~~~~~~~~~~~l~~av~~g~i~~~rid~av~RIL~~K~~~Glf~~p~~~~~~~~~  375 (453)
                      ++..+.....++++.++.||+||+|.+.+...+++.|.+||++|.|+++|||+||+|||++|+++||||+||.+....+.
T Consensus       292 ~~~~~~~~~~~~~~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~p~~~~~~~~~  371 (388)
T d1x38a1         292 ITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQ  371 (388)
T ss_dssp             GSSSTTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGG
T ss_pred             cccccCCcHHHHHHHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCChhhhhh
Confidence            98877777778899999999999999988888999999999999999999999999999999999999999988765677


Q ss_pred             cccHHHHHHHHHHHHhc
Q 040637          376 LGSQAHRDLAREAVRKS  392 (453)
Q Consensus       376 ~~~~~h~~la~~~a~~S  392 (453)
                      +++++|+++|+|+|+||
T Consensus       372 i~~~~h~~~a~~aA~~S  388 (388)
T d1x38a1         372 LGKQEHRDLAREAARKS  388 (388)
T ss_dssp             TTCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhcC
Confidence            89999999999999997
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure