Citrus Sinensis ID: 040673

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY
cccHHHHHHHHHHHHHHHcccccccccccccEEEEcccccEEEccccEEEEEEcccccccEEEccEEEEEEEEEEEEEcccccccEEEEEEEEccccccccEEEEEEcccccccEEEEEEEEEccccccEEEEEEccccccccEEEEEEEcccEEEEEEccEEEEEEEEcccccccccccccEEEEEEEEccccccccccEEEEccccccEEEEEcEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEEccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEcccEEEEEEccccEEEEcccHHcccccccccccEEEEEEcccccHccccccEEcccccccEEEEEcccccccEEcccccccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEccccccccccccccHcccccc
MASLQTFSMVLFFTAIAFHQDFVIAKFSKSmyinwgahhsaivgnGEDLNLVldqssgsgaqsKISFLFGSIEMLIKlvpgnsagtVTAYYLtssgsqhdeidfeflgnvsgqpyiihtniytqgkgdreqqfylwfdptadyhnytihwnPTEVVWYVDSVPIRVFRnyekegiaypnkqgmrthvsiwnadnwatrggldkidwsnapFIARLRRFRARAckwngpvsisrcatktpgnwwtsptysqlssarmgQLKWVREKYMIYNYCKDtkrfngkmapecskpqy
MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKegiaypnkqgmrtHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARAckwngpvsisrcatktpgnwwtsptysqlssaRMGQLKWVREKYMIYNYCKDtkrfngkmapecskpqy
MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIarlrrfraraCKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY
*****TFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLD*******QSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRF*************
*****TFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPV*************W***TYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSK***
MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGK**********
MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGP************NWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPEC*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiii
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query291 2.2.26 [Sep-21-2011]
Q9SVV2292 Probable xyloglucan endot yes no 0.993 0.989 0.605 1e-106
Q9ZV40305 Probable xyloglucan endot no no 0.886 0.845 0.549 3e-81
Q38857284 Xyloglucan endotransgluco no no 0.945 0.968 0.521 4e-80
Q9FKL9285 Probable xyloglucan endot no no 0.869 0.887 0.539 6e-80
Q38907284 Probable xyloglucan endot no no 0.941 0.964 0.519 6e-80
Q38910286 Probable xyloglucan endot no no 0.965 0.982 0.512 2e-79
P24806269 Xyloglucan endotransgluco no no 0.914 0.988 0.496 1e-78
Q39857295 Probable xyloglucan endot no no 0.903 0.891 0.511 5e-78
Q38911289 Probable xyloglucan endot no no 0.862 0.868 0.534 7e-78
P93349295 Probable xyloglucan endot N/A no 0.962 0.949 0.482 3e-77
>sp|Q9SVV2|XTH26_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1 Back     alignment and function desciption
 Score =  384 bits (985), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/294 (60%), Positives = 224/294 (76%), Gaps = 5/294 (1%)

Query: 1   MASLQ--TFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSG 58
           MA LQ  T   VL        + FV A FSK+  + WG  H  +  NG +L LVLD+S+G
Sbjct: 1   MAGLQAKTLMFVLAAALATLGRTFVEADFSKNFIVTWGKDH--MFMNGTNLRLVLDKSAG 58

Query: 59  SGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIH 118
           S  +SK++ LFGS+EMLIKLVPGNSAGTV AYYL+S+GS HDEIDFEFLGN +GQPY IH
Sbjct: 59  SAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIH 118

Query: 119 TNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYP 178
           TN+Y QGKG+REQQF  WF+PT  +HNYTIHWNP+EVVW+VD  PIRVFRNYE EGIAYP
Sbjct: 119 TNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYP 178

Query: 179 NKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKT 238
           NKQGM+   S+WNA++WAT+GG  K +W+ APF+A  RR++ARAC W G VSI +C   T
Sbjct: 179 NKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPT 238

Query: 239 -PGNWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY 291
              NWWTSP++SQL+++++ +++ +R+ +MIY+YCKDT RF G M PECSK Q+
Sbjct: 239 IRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPECSKKQF 292
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q9ZV40|XTH21_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1 Back     alignment and function description
>sp|Q38857|XTH22_ARATH Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1 Back     alignment and function description
>sp|Q9FKL9|XTH12_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1 Back     alignment and function description
>sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2 Back     alignment and function description
>sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1 Back     alignment and function description
>sp|P24806|XTH24_ARATH Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2 Back     alignment and function description
>sp|Q39857|XTH_SOYBN Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q38911|XTH15_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
225445160291 PREDICTED: probable xyloglucan endotrans 1.0 1.0 0.776 1e-138
255546399291 Xyloglucan endotransglucosylase/hydrolas 1.0 1.0 0.759 1e-133
224142171291 predicted protein [Populus trichocarpa] 1.0 1.0 0.749 1e-129
356496414289 PREDICTED: probable xyloglucan endotrans 0.993 1.0 0.721 1e-127
356531299289 PREDICTED: probable xyloglucan endotrans 0.993 1.0 0.718 1e-126
357500741288 Xyloglucan endotransglycosylase [Medicag 0.965 0.975 0.706 1e-122
356511371283 PREDICTED: probable xyloglucan endotrans 0.965 0.992 0.713 1e-120
357520923284 Xyloglucan endotransglycosylase [Medicag 0.917 0.940 0.710 1e-114
297738786 900 unnamed protein product [Vitis vinifera] 0.783 0.253 0.798 1e-108
297803880292 predicted protein [Arabidopsis lyrata su 0.993 0.989 0.612 1e-105
>gi|225445160|ref|XP_002280688.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 26 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 226/291 (77%), Positives = 253/291 (86%)

Query: 1   MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSG 60
           M S Q   + L  TA+AF Q FV A FSKSMY NWGA HS+I+GNG+DL LVLD +SGSG
Sbjct: 1   MGSFQVLFVALLVTAVAFEQSFVDANFSKSMYFNWGASHSSILGNGDDLQLVLDSTSGSG 60

Query: 61  AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTN 120
            Q+K +FLFGSIEMLIKLVPGNSAGTVTAYYL+S+GS+HDEIDFEFLGNVSGQPY IHTN
Sbjct: 61  VQTKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSSTGSKHDEIDFEFLGNVSGQPYTIHTN 120

Query: 121 IYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNK 180
           IYTQG G REQQFYLWFDPTAD+HNYTIHWNPTEVVWY+DS+PIRVFRNYE EGIAYP+K
Sbjct: 121 IYTQGNGSREQQFYLWFDPTADFHNYTIHWNPTEVVWYIDSIPIRVFRNYENEGIAYPSK 180

Query: 181 QGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPG 240
           QGMR + SIWNADNWATRGGL KIDW +APF+AR R FRARACKWNGPVSI +CA+K+P 
Sbjct: 181 QGMRVYSSIWNADNWATRGGLVKIDWYSAPFVARFRHFRARACKWNGPVSIDQCASKSPA 240

Query: 241 NWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY 291
           NWWTSP YSQLS A+ GQ+KWVR+ +MIY+YCKDTKRF G M PEC KPQ+
Sbjct: 241 NWWTSPVYSQLSYAKKGQMKWVRDNHMIYDYCKDTKRFQGNMPPECFKPQF 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255546399|ref|XP_002514259.1| Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis] gi|223546715|gb|EEF48213.1| Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224142171|ref|XP_002324432.1| predicted protein [Populus trichocarpa] gi|222865866|gb|EEF02997.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356496414|ref|XP_003517063.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 26-like [Glycine max] Back     alignment and taxonomy information
>gi|356531299|ref|XP_003534215.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 26-like [Glycine max] Back     alignment and taxonomy information
>gi|357500741|ref|XP_003620659.1| Xyloglucan endotransglycosylase [Medicago truncatula] gi|355495674|gb|AES76877.1| Xyloglucan endotransglycosylase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356511371|ref|XP_003524400.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 26-like [Glycine max] Back     alignment and taxonomy information
>gi|357520923|ref|XP_003630750.1| Xyloglucan endotransglycosylase [Medicago truncatula] gi|355524772|gb|AET05226.1| Xyloglucan endotransglycosylase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297738786|emb|CBI28031.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297803880|ref|XP_002869824.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297315660|gb|EFH46083.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
TAIR|locus:2117838292 XTH26 "xyloglucan endotransglu 0.993 0.989 0.585 1.2e-95
TAIR|locus:2053967305 XTH21 "xyloglucan endotransglu 0.896 0.855 0.544 1.6e-77
TAIR|locus:2174572285 XTH12 "xyloglucan endotransglu 0.969 0.989 0.506 4.5e-75
TAIR|locus:2128936269 XTH24 "xyloglucan endotransglu 0.697 0.754 0.583 2.3e-74
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.945 0.968 0.507 1.1e-73
TAIR|locus:2117567286 XTR6 "xyloglucan endotransglyc 0.969 0.986 0.501 5.9e-73
TAIR|locus:2117492287 XTH14 "xyloglucan endotransglu 0.903 0.916 0.525 1.6e-72
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.941 0.964 0.508 2.5e-72
TAIR|locus:2174582284 XTH13 "xyloglucan endotransglu 0.962 0.985 0.484 4.1e-72
TAIR|locus:2118751277 XTH19 "xyloglucan endotransglu 0.945 0.992 0.486 1.4e-71
TAIR|locus:2117838 XTH26 "xyloglucan endotransglucosylase/hydrolase 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
 Identities = 172/294 (58%), Positives = 216/294 (73%)

Query:     1 MASLQ--TFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSG 58
             MA LQ  T   VL        + FV A FSK+  + WG  H  +  NG +L LVLD+S+G
Sbjct:     1 MAGLQAKTLMFVLAAALATLGRTFVEADFSKNFIVTWGKDHMFM--NGTNLRLVLDKSAG 58

Query:    59 SGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIH 118
             S  +SK++ LFGS+EMLIKLVPGNSAGTV AYYL+S+GS HDEIDFEFLGN +GQPY IH
Sbjct:    59 SAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIH 118

Query:   119 TNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYP 178
             TN+Y QGKG+REQQF  WF+PT  +HNYTIHWNP+EVVW+VD  PIRVFRNYE EGIAYP
Sbjct:   119 TNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYP 178

Query:   179 NKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIXXXXXXXXXXCKWNGPVSISRCATKT 238
             NKQGM+   S+WNA++WAT+GG  K +W+ APF+          C W G VSI +C   T
Sbjct:   179 NKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPT 238

Query:   239 -PGNWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY 291
                NWWTSP++SQL+++++ +++ +R+ +MIY+YCKDT RF G M PECSK Q+
Sbjct:   239 IRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPECSKKQF 292
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
TAIR|locus:2053967 XTH21 "xyloglucan endotransglucosylase/hydrolase 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174572 XTH12 "xyloglucan endotransglucosylase/hydrolase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128936 XTH24 "xyloglucan endotransglucosylase/hydrolase 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117567 XTR6 "xyloglucan endotransglycosylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117492 XTH14 "xyloglucan endotransglucosylase/hydrolase 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174582 XTH13 "xyloglucan endotransglucosylase/hydrolase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118751 XTH19 "xyloglucan endotransglucosylase/hydrolase 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SVV2XTH26_ARATH2, ., 4, ., 1, ., 2, 0, 70.60540.99310.9897yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.207LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 0.0
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-147
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 1e-70
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 3e-25
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 6e-22
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 5e-19
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 4e-16
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 3e-09
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 7e-08
cd02178258 cd02178, GH16_beta_agarase, Beta-agarase, member o 6e-04
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
 Score =  531 bits (1368), Expect = 0.0
 Identities = 219/291 (75%), Positives = 250/291 (85%)

Query: 1   MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSG 60
           MASL+T  + LF    AF + FV A FSKSMY  WGA HS+++GNG++L LVLDQSSGSG
Sbjct: 1   MASLKTLLVALFAALAAFDRSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSG 60

Query: 61  AQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTN 120
            +SK +FLFGSIEMLIKLVPGNSAGTVTAYYL+S+GS+HDEIDFEFLGNVSGQPY IHTN
Sbjct: 61  IKSKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSSTGSRHDEIDFEFLGNVSGQPYTIHTN 120

Query: 121 IYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNK 180
           IYTQG G REQQF  WFDPTAD+HNYTIHWNP+EVVWYVD  PIRVFRNYE EGIAYPNK
Sbjct: 121 IYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYENEGIAYPNK 180

Query: 181 QGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPG 240
           QGMR + S+WNADNWAT+GG  KIDW+ APF+AR RRFRARACKWNGPVSI +CA  TP 
Sbjct: 181 QGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPS 240

Query: 241 NWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY 291
           NWWTSP+YSQL++A++ Q+K VR+ +MIY+YCKDTKRFNG M PEC KPQ+
Sbjct: 241 NWWTSPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKPQF 291

Length = 291
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185687 cd02178, GH16_beta_agarase, Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 291
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.96
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.96
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.96
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.94
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.94
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.93
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.85
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.61
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.42
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 91.19
smart00560133 LamGL LamG-like jellyroll fold domain. 88.68
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 88.17
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 86.46
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 85.83
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 80.76
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-87  Score=620.30  Aligned_cols=291  Identities=75%  Similarity=1.307  Sum_probs=258.6

Q ss_pred             CcchhhHHHHHHHHHHHhccccccccccccceeeeeCCCeEEecCCcEEEEEEecCCCCeeEEceeeEeEEEEEEEEecC
Q 040673            1 MASLQTFSMVLFFTAIAFHQDFVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVP   80 (291)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGsgi~Sk~~~~YG~~e~riKlp~   80 (291)
                      |||+..+-+.+++++++.....+..+|.++|.++|+.+|+.+.++|+.|+|+||+.+|++|+||+.|+||+||+|||||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~   80 (291)
T PLN03161          1 MASLKTLLVALFAALAAFDRSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVP   80 (291)
T ss_pred             ChhHHHHHHHHHHHHHhcCCCcccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCC
Confidence            78873322222222222223335678999999999999999988887899999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEecCCCCCCeeeeecCCCCCCCCeEEEeeeeeCCCCCceeeEecCCCCCCCcEEEEEEEcCCeEEEEEc
Q 040673           81 GNSAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVD  160 (291)
Q Consensus        81 g~s~G~v~AFwl~~~~~~~~EID~E~lG~~~g~p~~~~tnv~~~g~g~~e~~~~l~fd~~~dfHtY~i~Wtp~~I~fyVD  160 (291)
                      |+++|+||||||++.++.+|||||||||+++++|+++|||+|.+|.+++++++.++||++++||+|+|+|+|++|+||||
T Consensus        81 G~saG~v~AFwl~s~~~~~dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVD  160 (291)
T PLN03161         81 GNSAGTVTAYYLSSTGSRHDEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVD  160 (291)
T ss_pred             CCCCCeEEEEEecCCCCCCCeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEEC
Confidence            88899999999999777899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeeEEEEeccccCCccCCCCCcceEEEEeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEeeeecCCCCCcCcCCCCCCC
Q 040673          161 SVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPG  240 (291)
Q Consensus       161 G~~vr~~~~~~~~g~~~P~~~Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~~~c~~~~~~  240 (291)
                      |++||++++.+..|.+||+++||+|++|||+|++|||+||++||||+++||+|.|++|++++|.+++..+...|..++..
T Consensus       161 G~~iRt~~~~~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~  240 (291)
T PLN03161        161 GTPIRVFRNYENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPS  240 (291)
T ss_pred             CEEEEEEEcccccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCcc
Confidence            99999999877778899987899999999999999999999999999999999999999999988653123469754225


Q ss_pred             CCCCCCCccCCCHHHHHHHHHHhhcCeeeecccCCCCCCCCCCCCCCCCCC
Q 040673          241 NWWTSPTYSQLSSARMGQLKWVREKYMIYNYCKDTKRFNGKMAPECSKPQY  291 (291)
Q Consensus       241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~yc~d~~r~~~~~~~ec~~~~~  291 (291)
                      .||+++.|+.|+++|+++|+|||+||||||||+|++|||+++||||.++++
T Consensus       241 ~~~~~~~~~~l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~~~  291 (291)
T PLN03161        241 NWWTSPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKPQF  291 (291)
T ss_pred             ccccCccccCCCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCCCcC
Confidence            799999999999999999999999999999999999999878999999875

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 2e-73
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 8e-46
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 1e-45
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 7e-44
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 8e-44
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 3e-12
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 1e-09
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 1e-09
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 1e-09
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 1e-09
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 2e-09
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 2e-09
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 4e-09
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 9e-09
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 9e-09
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 4e-08
3h0o_A240 The Importance Of Ch-Pi Stacking Interactions Betwe 7e-05
3axd_A249 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 8e-05
2r49_A241 Mutational And Structural Studies Of E85i Reveal Th 1e-04
3hr9_A241 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 2e-04
1mve_A243 Crystal Structure Of A Natural Circularly-Permutate 5e-04
1zm1_A241 Crystal Structures Of Complex F. Succinogenes 1,3-1 6e-04
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  272 bits (695), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 130/268 (48%), Positives = 173/268 (64%), Gaps = 4/268 (1%)
Query: 23  VIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGN 82
           V   F ++    W   H      G ++ L LD+ +G+G QSK S+LFG   M +KLVPG+
Sbjct: 13  VDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGD 72
Query: 83  SAGTVTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTAD 142
           SAGTVTA+YL+S  S+HDEIDFEFLGN +GQPYI+ TN++T GKGDREQ+ YLWFDPT +
Sbjct: 73  SAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKE 132
Query: 143 YHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLD 202
           +H Y++ WN   +V+ VD VPIRVF+N +  G+ +P  Q M+ + S+WNAD+WATRGGL+
Sbjct: 133 FHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLE 192
Query: 203 KIDWSNAPFIXXXXXXXXXXCKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWV 262
           K DWS APFI          C+    V    CAT+    WW    +  L + +  +L WV
Sbjct: 193 KTDWSKAPFIASYRSFHIDGCE--ASVEAKFCATQG-ARWWDQKEFQDLDAFQYRRLSWV 249
Query: 263 REKYMIYNYCKDTKRFNGKMAPECSKPQ 290
           R+KY IYNYC D  R+   M PEC + +
Sbjct: 250 RQKYTIYNYCTDRSRYPS-MPPECKRDR 276
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3H0O|A Chain A, The Importance Of Ch-Pi Stacking Interactions Between Carbohydrate And Aromatic Residues In Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase Length = 240 Back     alignment and structure
>pdb|3AXD|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form Length = 249 Back     alignment and structure
>pdb|2R49|A Chain A, Mutational And Structural Studies Of E85i Reveal The Flexible Loops Of Fibrobacter Succinogenes 1,3-1,4-beta-d- Glucanaseglucanase Length = 241 Back     alignment and structure
>pdb|3HR9|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D- Glucanase F40i Mutant Length = 241 Back     alignment and structure
>pdb|1MVE|A Chain A, Crystal Structure Of A Natural Circularly-Permutated Jellyroll Protein: 1,3-1,4-Beta-D-Glucanase From Fibrobacter Succinogenes Length = 243 Back     alignment and structure
>pdb|1ZM1|A Chain A, Crystal Structures Of Complex F. Succinogenes 1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose Length = 241 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-102
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 7e-86
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 7e-59
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 1e-55
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 4e-54
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 4e-52
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 8e-51
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 7e-48
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 1e-46
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 7e-19
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 1e-12
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 2e-08
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 2e-08
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 2e-08
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 4e-07
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 7e-07
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 1e-06
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 1e-06
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 1e-06
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 2e-06
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 5e-06
3rq0_A269 Glycosyl hydrolases family protein 16; structural 3e-05
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 4e-05
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 7e-04
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 9e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  299 bits (767), Expect = e-102
 Identities = 128/264 (48%), Positives = 171/264 (64%), Gaps = 4/264 (1%)

Query: 27  FSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGT 86
           F ++    W   H      G ++ L LD+ +G+G QSK S+LFG   M +KLVPG+SAGT
Sbjct: 17  FGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGT 76

Query: 87  VTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNY 146
           VTA+YL+S  S+HDEIDFEFLGN +GQPYI+ TN++T GKGDREQ+ YLWFDPT ++H Y
Sbjct: 77  VTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYY 136

Query: 147 TIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDW 206
           ++ WN   +V+ VD VPIRVF+N +  G+ +P  Q M+ + S+WNAD+WATRGGL+K DW
Sbjct: 137 SVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDW 196

Query: 207 SNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKY 266
           S APFIA  R F    C+ +               WW    +  L + +  +L WVR+KY
Sbjct: 197 SKAPFIASYRSFHIDGCEASVEAKFCAT---QGARWWDQKEFQDLDAFQYRRLSWVRQKY 253

Query: 267 MIYNYCKDTKRFNGKMAPECSKPQ 290
            IYNYC D  R+   M PEC + +
Sbjct: 254 TIYNYCTDRSRYPS-MPPECKRDR 276
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Length = 308 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query291
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 99.98
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 99.98
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.98
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.97
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.93
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.92
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.85
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.75
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 96.91
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 88.24
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=1.4e-78  Score=560.64  Aligned_cols=263  Identities=50%  Similarity=0.983  Sum_probs=245.5

Q ss_pred             cccccccccceeeeeCCCeEEecCCcEEEEEEecCCCCeeEEceeeEeEEEEEEEEecCCCCCceEEEEEEecCCCCCCe
Q 040673           22 FVIAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDE  101 (291)
Q Consensus        22 ~~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGsgi~Sk~~~~YG~~e~riKlp~g~s~G~v~AFwl~~~~~~~~E  101 (291)
                      ..+.+|.++|+++|+++||++.++|+.|+|+|++.+|++|.||+.|+||+||||||+|+|+++|+||||||++++|.++|
T Consensus        12 ~~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~gE   91 (278)
T 1umz_A           12 PVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDE   91 (278)
T ss_dssp             CCCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCE
T ss_pred             ccCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCCe
Confidence            46789999999999999999988888899999999999999999999999999999999878999999999998889999


Q ss_pred             eeeecCCCCCCCCeEEEeeeeeCCCCCceeeEecCCCCCCCcEEEEEEEcCCeEEEEEcCeeEEEEeccccCCccCCCCC
Q 040673          102 IDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQ  181 (291)
Q Consensus       102 ID~E~lG~~~g~p~~~~tnv~~~g~g~~e~~~~l~fd~~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~  181 (291)
                      ||||++|+.+++|+++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++++++++.+..+.+||+++
T Consensus        92 IDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~~  171 (278)
T 1umz_A           92 IDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQ  171 (278)
T ss_dssp             EEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSS
T ss_pred             EEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCCC
Confidence            99999999988999999999999998898889999999999999999999999999999999999998776678899779


Q ss_pred             cceEEEEeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEeeeecCCCCCcCcCCCCCCCCCCCCCCccCCCHHHHHHHHH
Q 040673          182 GMRTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKW  261 (291)
Q Consensus       182 Pm~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~  261 (291)
                      ||+|+||||+||+|+++||++++||.++||+++|+.+++.+|..+.  +...|.+.+ ..||+++.+++|+++|+++|+|
T Consensus       172 P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~--~~~~c~~~~-~~~~~~~~~~~l~~~~~~~~~~  248 (278)
T 1umz_A          172 PMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASV--EAKFCATQG-ARWWDQKEFQDLDAFQYRRLSW  248 (278)
T ss_dssp             CBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCS--SSCCCTTTT-CSGGGSGGGSSCCHHHHHHHHH
T ss_pred             ceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCC--CCCccCCCc-ccccccCccccCCHHHHHHHHH
Confidence            9999999999999999999889999999999999999999998754  334697654 5699999999999999999999


Q ss_pred             HhhcCeeeecccCCCCCCCCCCCCCCC
Q 040673          262 VREKYMIYNYCKDTKRFNGKMAPECSK  288 (291)
Q Consensus       262 ~~~~~~~y~yc~d~~r~~~~~~~ec~~  288 (291)
                      ||+||||||||+|++|||+ +||||.+
T Consensus       249 ~~~~~~~y~yc~d~~r~~~-~~~ec~~  274 (278)
T 1umz_A          249 VRQKYTIYNYCTDRSRYPS-MPPECKR  274 (278)
T ss_dssp             HHHHTEEEEGGGCTTTCSS-CCTHHHH
T ss_pred             HHHCCeEEecCCCCCcCCC-CCcccCC
Confidence            9999999999999999998 8999964
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 291
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 4e-96
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 6e-41
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 4e-20
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 2e-16
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 6e-09
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 4e-05
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  282 bits (722), Expect = 4e-96
 Identities = 128/264 (48%), Positives = 171/264 (64%), Gaps = 4/264 (1%)

Query: 27  FSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGT 86
           F ++    W   H      G ++ L LD+ +G+G QSK S+LFG   M +KLVPG+SAGT
Sbjct: 6   FGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGT 65

Query: 87  VTAYYLTSSGSQHDEIDFEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNY 146
           VTA+YL+S  S+HDEIDFEFLGN +GQPYI+ TN++T GKGDREQ+ YLWFDPT ++H Y
Sbjct: 66  VTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYY 125

Query: 147 TIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGMRTHVSIWNADNWATRGGLDKIDW 206
           ++ WN   +V+ VD VPIRVF+N +  G+ +P  Q M+ + S+WNAD+WATRGGL+K DW
Sbjct: 126 SVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDW 185

Query: 207 SNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVREKY 266
           S APFIA  R F    C+ +               WW    +  L + +  +L WVR+KY
Sbjct: 186 SKAPFIASYRSFHIDGCEASVEAKFCAT---QGARWWDQKEFQDLDAFQYRRLSWVRQKY 242

Query: 267 MIYNYCKDTKRFNGKMAPECSKPQ 290
            IYNYC D  R+   M PEC + +
Sbjct: 243 TIYNYCTDRSRYPS-MPPECKRDR 265
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query291
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.96
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.95
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.95
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 90.08
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 89.84
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 89.74
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 86.88
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 85.5
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 84.55
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 84.29
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 84.08
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 84.08
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=2.3e-80  Score=567.65  Aligned_cols=262  Identities=50%  Similarity=0.987  Sum_probs=246.9

Q ss_pred             cccccccceeeeeCCCeEEecCCcEEEEEEecCCCCeeEEceeeEeEEEEEEEEecCCCCCceEEEEEEecCCCCCCeee
Q 040673           24 IAKFSKSMYINWGAHHSAIVGNGEDLNLVLDQSSGSGAQSKISFLFGSIEMLIKLVPGNSAGTVTAYYLTSSGSQHDEID  103 (291)
Q Consensus        24 ~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGsgi~Sk~~~~YG~~e~riKlp~g~s~G~v~AFwl~~~~~~~~EID  103 (291)
                      ..+|.++|.++|+++||++.++|..|+|+||+.+||+|+||++|+||+||||||||+|+++|++++||++++++.++|||
T Consensus         3 ~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dEID   82 (267)
T d1umza_           3 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEID   82 (267)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEEE
T ss_pred             cccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCeEE
Confidence            45899999999999999999999999999999999999999999999999999999998889999999998888999999


Q ss_pred             eecCCCCCCCCeEEEeeeeeCCCCCceeeEecCCCCCCCcEEEEEEEcCCeEEEEEcCeeEEEEeccccCCccCCCCCcc
Q 040673          104 FEFLGNVSGQPYIIHTNIYTQGKGDREQQFYLWFDPTADYHNYTIHWNPTEVVWYVDSVPIRVFRNYEKEGIAYPNKQGM  183 (291)
Q Consensus       104 ~E~lG~~~g~p~~~~tnv~~~g~g~~e~~~~l~fd~~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm  183 (291)
                      ||++|+..++++++|+|+|.++.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.++|.++||
T Consensus        83 iE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~pm  162 (267)
T d1umza_          83 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPM  162 (267)
T ss_dssp             EEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCB
T ss_pred             EEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888999988999


Q ss_pred             eEEEEeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEeeeecCCCCCcCcCCCCCCCCCCCCCCccCCCHHHHHHHHHHh
Q 040673          184 RTHVSIWNADNWATRGGLDKIDWSNAPFIARLRRFRARACKWNGPVSISRCATKTPGNWWTSPTYSQLSSARMGQLKWVR  263 (291)
Q Consensus       184 ~l~lnlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  263 (291)
                      +|++|||+||+|||+||++|+||+++||+|.|++|+|++|.+++  ....|...+ ..||++..++.|+.+|+++|+|||
T Consensus       163 ~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~--~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~  239 (267)
T d1umza_         163 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASV--EAKFCATQG-ARWWDQKEFQDLDAFQYRRLSWVR  239 (267)
T ss_dssp             EEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCS--SSCCCTTTT-CSGGGSGGGSSCCHHHHHHHHHHH
T ss_pred             EEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCC--CCcccCCCC-CccccccccccCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999876  344565443 579999999999999999999999


Q ss_pred             hcCeeeecccCCCCCCCCCCCCCCCC
Q 040673          264 EKYMIYNYCKDTKRFNGKMAPECSKP  289 (291)
Q Consensus       264 ~~~~~y~yc~d~~r~~~~~~~ec~~~  289 (291)
                      +||||||||.|++|||. +||||.++
T Consensus       240 ~~~~~y~yC~d~~r~~~-~p~EC~~~  264 (267)
T d1umza_         240 QKYTIYNYCTDRSRYPS-MPPECKRD  264 (267)
T ss_dssp             HHTEEEEGGGCTTTCSS-CCTHHHHH
T ss_pred             HCCcEEccCCCCCcCCC-CCcccCCC
Confidence            99999999999999996 79999754
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure