Citrus Sinensis ID: 040722

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR
cHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccccccEEEEEEEEEEccccEEEccccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccccHHHHcHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEccccccccEEcccccccccccccccccccccccccHHHHHHHHHHccccEEEEEEccEEEEEEEEccEEEEEccHHHHHHHHHHHHHccccEEEEEc
ccHHHHHHHHHHHHHHHHHHHEEEEEEEcccccccccccccccccccccEEEEEEEEcccccEEEEccccHHcHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccHHHHHccccHHHHHHHHcHHHHHEEccccccccccccccccccccccccccccHHHHHHHHHHccccHHcEEEEccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHccccccEEEEcccccccEEEcccEEEccccHHHHHHHHHHHHHccccEEEEEc
MASIIISIIFHTllyselhpakakpwirvgyLNLSkvstisginydlfthlicpsadinsttyqlslslpsddnqIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVrnsshrksfidSSIRIARLYGfqgldfawtapntstdmfnvGLLFDEWRIAATKLEAKNSSRQQSQLILTARFlysppansylLNSIQRNLNWVHAVTasyyepvstnftappaalygsssggfarSTDQVLKAWIERGLSADKLVMGLPFYGYAwtlvkpedngigaaatgpalhgnglvTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKleaknssrqqSQLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYakekrllgyyvwr
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR
***IIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLE*********QLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVW*
*ASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEA***SRQQSQLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLE********SQLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR
MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASIIISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARFLYSPPANSYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query355 2.2.26 [Sep-21-2011]
Q13231 466 Chitotriosidase-1 OS=Homo yes no 0.828 0.630 0.293 4e-28
Q9D7Q1 464 Chitotriosidase-1 OS=Mus yes no 0.822 0.629 0.274 4e-27
Q15782390 Chitinase-3-like protein no no 0.746 0.679 0.255 5e-21
P36222383 Chitinase-3-like protein no no 0.828 0.767 0.271 9e-21
Q5RBP6410 Chitinase-3-like protein no no 0.839 0.726 0.277 1e-20
Q91XA9 473 Acidic mammalian chitinas no no 0.853 0.640 0.262 3e-20
Q9WTV1381 Chitinase-3-like protein no no 0.836 0.779 0.276 3e-20
Q6RY07 473 Acidic mammalian chitinas no no 0.853 0.640 0.265 4e-20
Q91Z98402 Chitinase-3-like protein no no 0.839 0.741 0.270 5e-20
Q95M17 472 Acidic mammalian chitinas no no 0.842 0.633 0.262 1e-19
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 Back     alignment and function desciption
 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 164/331 (49%), Gaps = 37/331 (11%)

Query: 43  INYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDT 102
           ++  L THLI   A +  T +QLS +  +D+    +F + ++K NP +  LL+IG G + 
Sbjct: 46  LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 101

Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIA 162
               ++ MV  +++R++F++S+IR  R Y F GLD  W  P +           D+ R  
Sbjct: 102 GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 156

Query: 163 ATKLEAKNSSRQQSQLILTARFLYS---PPANSYL-----LNSIQRNLNWVHAVTASYY- 213
               +  N+ +Q++Q     R L S   P   +Y+     ++ I +NL++V+ +   ++ 
Sbjct: 157 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 216

Query: 214 --EPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVK 271
             E V T   +P       S    + + D  ++ W+++G  A KL++G+P YG ++TL  
Sbjct: 217 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 275

Query: 272 PEDNGIGAAATGPALHG-----NGLVTYKEI---KNYIKNYCPNVQVMYNTIYVMNYFST 323
             D  +GA ATG    G      G++ Y E+   K   K    + +V Y  I+  N    
Sbjct: 276 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPY--IFRDNQ--- 330

Query: 324 RTIWFGFDDVEAVRAKIAYAKEKRLLGYYVW 354
              W GFDDVE+ + K++Y K+K L G  VW
Sbjct: 331 ---WVGFDDVESFKTKVSYLKQKGLGGAMVW 358
Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens. Isoform 3 has no enzymatic activity.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 Back     alignment and function description
>sp|Q15782|CH3L2_HUMAN Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1 Back     alignment and function description
>sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 Back     alignment and function description
>sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 Back     alignment and function description
>sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 Back     alignment and function description
>sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 Back     alignment and function description
>sp|Q91Z98|CH3L4_MOUSE Chitinase-3-like protein 4 OS=Mus musculus GN=Chi3l4 PE=1 SV=2 Back     alignment and function description
>sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
356558668 909 PREDICTED: uncharacterized protein LOC10 0.957 0.374 0.515 4e-88
224142425 763 predicted protein [Populus trichocarpa] 0.974 0.453 0.516 3e-81
359484771 781 PREDICTED: G-type lectin S-receptor-like 0.918 0.417 0.484 6e-78
359497679359 PREDICTED: chitotriosidase-1-like [Vitis 0.946 0.935 0.474 1e-77
224142429375 predicted protein [Populus trichocarpa] 0.963 0.912 0.461 2e-75
255565055 721 conserved hypothetical protein [Ricinus 0.915 0.450 0.477 3e-75
359497026 738 PREDICTED: G-type lectin S-receptor-like 0.946 0.455 0.466 5e-75
255565049371 chitinase, putative [Ricinus communis] g 0.971 0.929 0.419 7e-65
296088199 1130 unnamed protein product [Vitis vinifera] 0.878 0.276 0.424 2e-64
356564921372 PREDICTED: chitotriosidase-1-like [Glyci 0.960 0.916 0.412 2e-61
>gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max] Back     alignment and taxonomy information
 Score =  331 bits (848), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 182/353 (51%), Positives = 234/353 (66%), Gaps = 13/353 (3%)

Query: 5   IISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQ 64
           I  ++F  LL  E  P KA+ W++ GY        +S IN  L+THLIC  A++NS+TY+
Sbjct: 7   IALVLFEFLLCQEFEPLKAQTWLQAGYWYSGSGFPVSDINSALYTHLICAFAELNSSTYE 66

Query: 65  LSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSS 124
           L +S P D+   + F  TV+++NPSIT LLSI  G + N ++ S MV   S RK FI SS
Sbjct: 67  LYVS-PEDEQSFSSFTTTVKQKNPSITTLLSIAGG-NGNDTVLSLMVSKDSSRKYFIQSS 124

Query: 125 IRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARF 184
           IRIARLYGFQGLD +W  P T +DM N+G LF+EWR AA K EA N S Q   LILTA  
Sbjct: 125 IRIARLYGFQGLDLSWV-PETISDMNNMGRLFEEWR-AAAKSEAANDSTQV--LILTAAV 180

Query: 185 LYSPPANS--YLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQV 242
            + P  +S  Y + SIQ NLNWVH +T  Y+ P   NFTA  AALY  SS   + +TD  
Sbjct: 181 HFRPGLDSASYPVESIQNNLNWVHILTYDYHMPQLANFTAAHAALYDPSS---SVNTDNG 237

Query: 243 LKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIK 302
           +K WI  G++A KLV+GLPFYGYAW L  PEDN IGA+ATGPA+  +G + YK+IK YI+
Sbjct: 238 IKEWIGSGVTASKLVLGLPFYGYAWNLRNPEDNAIGASATGPAIGKSGAMNYKDIKAYIQ 297

Query: 303 NYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVWR 355
            Y  +V+  YN  YV+NYFS  + W G+DDVE V+ K++YA+E +LLGY VW+
Sbjct: 298 RYGGHVK--YNATYVVNYFSNGSTWIGYDDVEVVKMKVSYARENKLLGYAVWQ 348

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497679|ref|XP_003635605.1| PREDICTED: chitotriosidase-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142429|ref|XP_002324560.1| predicted protein [Populus trichocarpa] gi|222865994|gb|EEF03125.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|255565049|ref|XP_002523517.1| chitinase, putative [Ricinus communis] gi|223537224|gb|EEF38856.1| chitinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356564921|ref|XP_003550695.1| PREDICTED: chitotriosidase-1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
TAIR|locus:2134025379 ChiC "class V chitinase" [Arab 0.960 0.899 0.372 2.7e-59
TAIR|locus:2134030366 AT4G19820 [Arabidopsis thalian 0.954 0.926 0.372 7.5e-57
TAIR|locus:2134015398 AT4G19800 [Arabidopsis thalian 0.850 0.758 0.366 5.5e-54
TAIR|locus:2133940362 AT4G19750 [Arabidopsis thalian 0.839 0.823 0.393 1.9e-53
TAIR|locus:2133955369 AT4G19760 [Arabidopsis thalian 0.881 0.848 0.378 2.4e-53
TAIR|locus:2134010363 AT4G19720 [Arabidopsis thalian 0.915 0.895 0.350 3.8e-46
TAIR|locus:2134020332 AT4G19730 [Arabidopsis thalian 0.898 0.960 0.351 3.1e-44
TAIR|locus:2133970261 AT4G19770 [Arabidopsis thalian 0.670 0.911 0.391 2.5e-42
UNIPROTKB|Q13231 466 CHIT1 "Chitotriosidase-1" [Hom 0.816 0.622 0.296 1.6e-29
UNIPROTKB|F1S7U2 466 CHIT1 "Uncharacterized protein 0.839 0.639 0.287 2.1e-29
TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 131/352 (37%), Positives = 203/352 (57%)

Query:     5 IISIIFHTLLYSELHPAKAKPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQ 64
             +IS+I     +  L  + A+  ++  Y   +    ++ I+  LFTHL C  AD+NS T Q
Sbjct:     6 LISLIVSITFFLTLQCSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQ 65

Query:    65 LSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSS 124
             +++S  ++  + + F  TV++ NPS+  LLSIG G+  + + Y+SM  N + RKSFIDSS
Sbjct:    66 VTVS-SANQPKFSTFTQTVQRRNPSVKTLLSIGGGI-ADKTAYASMASNPTSRKSFIDSS 123

Query:   125 IRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARF 184
             IR+AR YGF GLD  W  P+++T+M N G L  EWR A     A+ SS  + +L+L A  
Sbjct:   124 IRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVV---AEASSSGKPRLLLAAAV 180

Query:   185 LYSPPANS--YLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQV 242
              YS    S  Y ++++  +L+WV+ +   +Y P  +  T PPAAL+  S+ G   S D  
Sbjct:   181 FYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAG--PSGDAG 238

Query:   243 LKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIK 302
              ++WI+ GL A K V+G P+YGYAW L     +   A  TG A+  +G + Y +I+ +I 
Sbjct:   239 TRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIV 298

Query:   303 NYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVW 354
             +       +YN+  V +Y    T W G+DD +++  K+ YAK++ LLGY+ W
Sbjct:   299 DN--GATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSW 348
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0004568 "chitinase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0006032 "chitin catabolic process" evidence=IDA
GO:0008843 "endochitinase activity" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0035885 "exochitinase activity" evidence=IDA
TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q13231 CHIT1 "Chitotriosidase-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S7U2 CHIT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.14LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00005604001
SubName- Full=Chromosome undetermined scaffold_155, whole genome shotgun sequence; (359 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
cd02879299 cd02879, GH18_plant_chitinase_class_V, The class V 7e-87
smart00636334 smart00636, Glyco_18, Glyco_18 domain 7e-61
pfam00704325 pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam 2e-57
cd02872362 cd02872, GH18_chitolectin_chitotriosidase, This co 9e-41
cd02873413 cd02873, GH18_IDGF, The IDGF's (imaginal disc grow 3e-24
cd06548322 cd06548, GH18_chitinase, The GH18 (glycosyl hydrol 2e-18
COG3325441 COG3325, ChiA, Chitinase [Carbohydrate transport a 9e-18
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 1e-11
cd02874313 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm 6e-08
cd06545253 cd06545, GH18_3CO4_chitinase, The Bacteroides thet 1e-06
COG3858423 COG3858, COG3858, Predicted glycosyl hydrolase [Ge 4e-04
>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
 Score =  263 bits (675), Expect = 7e-87
 Identities = 126/337 (37%), Positives = 187/337 (55%), Gaps = 57/337 (16%)

Query: 25  PWIRVGY-LNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTV 83
             ++ GY    S+    S I+  LFTHL    AD++ +TY++ +S PSD+++ + F +TV
Sbjct: 2   TIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVIS-PSDESEFSTFTETV 60

Query: 84  EKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAP 143
           +++NPS+  LLSIG G  ++ S +++M  + + RK+FI+SSI++AR YGF GLD  W  P
Sbjct: 61  KRKNPSVKTLLSIGGG-GSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFP 119

Query: 144 NTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARFLYSP------PANSYLLNS 197
           ++  +M N G L +EWR AA K EA++S R    L+LTA   +SP       + SY + +
Sbjct: 120 SSQVEMENFGKLLEEWR-AAVKDEARSSGR--PPLLLTAAVYFSPILFLSDDSVSYPIEA 176

Query: 198 IQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLV 257
           I +NL+WV+ +   YY    +N T P AALY  +S     STD  +K+WI+ G+ A KLV
Sbjct: 177 INKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSN---VSTDYGIKSWIKAGVPAKKLV 233

Query: 258 MGLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYV 317
           +GLP YG AWTL                                          Y+T  V
Sbjct: 234 LGLPLYGRAWTL------------------------------------------YDTTTV 251

Query: 318 MNYFSTRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVW 354
            +Y    T W G+DDV+++  K+ YAK+K LLGY+ W
Sbjct: 252 SSYVYAGTTWIGYDDVQSIAVKVKYAKQKGLLGYFAW 288

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299
>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain Back     alignment and domain information
>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 Back     alignment and domain information
>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 355
cd02879299 GH18_plant_chitinase_class_V The class V plant chi 100.0
cd02872362 GH18_chitolectin_chitotriosidase This conserved do 100.0
cd02873413 GH18_IDGF The IDGF's (imaginal disc growth factors 100.0
smart00636334 Glyco_18 Glycosyl hydrolase family 18. 100.0
cd02878345 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin 100.0
cd06548322 GH18_chitinase The GH18 (glycosyl hydrolases, fami 100.0
KOG2806432 consensus Chitinase [Carbohydrate transport and me 100.0
COG3325441 ChiA Chitinase [Carbohydrate transport and metabol 100.0
PF00704343 Glyco_hydro_18: Glycosyl hydrolases family 18; Int 100.0
cd02876318 GH18_SI-CLP Stabilin-1 interacting chitinase-like 100.0
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 100.0
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 100.0
cd06549298 GH18_trifunctional GH18 domain of an uncharacteriz 100.0
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 100.0
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 100.0
COG3858423 Predicted glycosyl hydrolase [General function pre 100.0
cd06546256 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 100.0
cd06544253 GH18_narbonin Narbonin is a plant 2S protein from 100.0
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 99.97
KOG2091392 consensus Predicted member of glycosyl hydrolase f 99.95
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 99.92
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 99.9
cd06543294 GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch 99.87
COG3469332 Chitinase [Carbohydrate transport and metabolism] 99.69
KOG4701 568 consensus Chitinase [Cell wall/membrane/envelope b 99.39
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 98.82
PF03644311 Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int 98.12
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.1
PF11340181 DUF3142: Protein of unknown function (DUF3142); In 97.78
PF13200316 DUF4015: Putative glycosyl hydrolase domain 97.6
KOG2331 526 consensus Predicted glycosylhydrolase [General fun 96.57
PF14883294 GHL13: Hypothetical glycosyl hydrolase family 13 92.93
TIGR02103 898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 92.63
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 91.97
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 91.22
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 91.17
PRK12313633 glycogen branching enzyme; Provisional 91.14
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 91.09
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 90.65
PRK12568730 glycogen branching enzyme; Provisional 90.28
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 89.86
COG1649418 Uncharacterized protein conserved in bacteria [Fun 89.45
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 88.94
PRK05402726 glycogen branching enzyme; Provisional 88.57
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 88.2
PRK14706 639 glycogen branching enzyme; Provisional 87.64
COG1306400 Uncharacterized conserved protein [Function unknow 87.58
PLN02960 897 alpha-amylase 87.0
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 86.52
cd02929370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 84.68
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 84.3
PF00724341 Oxidored_FMN: NADH:flavin oxidoreductase / NADH ox 83.21
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 82.91
PRK10785598 maltodextrin glucosidase; Provisional 82.54
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 82.39
PRK147051224 glycogen branching enzyme; Provisional 82.22
PLN02877 970 alpha-amylase/limit dextrinase 81.66
PLN02495385 oxidoreductase, acting on the CH-CH group of donor 80.76
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 80.26
PRK14581672 hmsF outer membrane N-deacetylase; Provisional 80.22
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 80.03
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
Probab=100.00  E-value=4.4e-66  Score=473.40  Aligned_cols=280  Identities=44%  Similarity=0.814  Sum_probs=254.4

Q ss_pred             CEEEEEEcCCC-CCCCCCCCCCCCcEEEEeeEEEeCCCcEEeeCCCCChhHHHHHHHHHHhhCCCcEEEEEEeCCCCCCC
Q 040722           26 WIRVGYLNLSK-VSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNY  104 (355)
Q Consensus        26 ~~vvgy~~~~~-~~~~~~~~~~~~thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~p~~kvllsiGg~~~~~~  104 (355)
                      -+++|||++|. .+.+++++.++||||+|+|+.++++++.+... +.+...+..+.+.+|+++|++|+++|||||+. ++
T Consensus         3 ~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~~lkvlisiGG~~~-~s   80 (299)
T cd02879           3 IVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVIS-PSDESEFSTFTETVKRKNPSVKTLLSIGGGGS-DS   80 (299)
T ss_pred             eEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeec-cccHHHHHHHHHHHHHhCCCCeEEEEEeCCCC-CC
Confidence            47899999987 89999999999999999999999988788877 55667788888889999999999999999986 57


Q ss_pred             cchhhhhcChhhHHHHHHHHHHHHHHcCCCeEEEEeeCCCCCcccchHHHHHHHHHHHHhhHHHhhccCCCCcEEEEEEe
Q 040722          105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARF  184 (355)
Q Consensus       105 ~~~~~~~~~~~~r~~fi~~l~~~l~~~~~DGididwe~~~~~~~~~~~~~~l~~l~~~~l~~~~~~~g~~~~~~~ls~a~  184 (355)
                      +.|+.++++++.|++||+++++++++|+|||||||||+|..++|+.+|+.||++||+ +|+++.+.+|  +++++||+++
T Consensus        81 ~~fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~-~l~~~~~~~~--~~~~~ls~av  157 (299)
T cd02879          81 SAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRA-AVKDEARSSG--RPPLLLTAAV  157 (299)
T ss_pred             chhhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHH-HHHHHhhccC--CCcEEEEeec
Confidence            899999999999999999999999999999999999999887899999999999999 9997765555  4569999999


Q ss_pred             cCCCCC-----C-ccchhhhhccccEEEeeecccCCCCCCCCCCCCCcCCCCCCCCCcccHHHHHHHHHHCCCCCCceEE
Q 040722          185 LYSPPA-----N-SYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVM  258 (355)
Q Consensus       185 ~~~~~~-----~-~~~~~~l~~~vD~v~lm~yd~~~~~~~~~~~~~apl~~~~~~~~~~~~~~~v~~~~~~g~~~~Kl~l  258 (355)
                      |+.+..     . .|+++++.++||||+||+||++++|....++|++||+.+..   ..+++.+|++|++.|+|++||+|
T Consensus       158 ~~~~~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~~~~~~~~~~a~l~~~~~---~~~~~~~v~~~~~~g~p~~Klvl  234 (299)
T cd02879         158 YFSPILFLSDDSVSYPIEAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNS---NVSTDYGIKSWIKAGVPAKKLVL  234 (299)
T ss_pred             ccchhhccccccccCCHHHHHhhCCEEEEEeecccCCCCCCCCCCCCcCCCCCC---CCCHHHHHHHHHHcCCCHHHEEE
Confidence            876643     2 78999999999999999999999998777899999997654   46899999999999999999999


Q ss_pred             eeecceeeeeecCCCCCCCCCcccCCCCCCCcccchHHHHHHHHhCCCCeeEEEecceeEEEEEeCCEEEEECCHHHHHH
Q 040722          259 GLPFYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRA  338 (355)
Q Consensus       259 glp~yG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~S~~~  338 (355)
                      |+|+|||.|++                                          ||+.+++||.+.+++||+|||++|++.
T Consensus       235 Gvp~YGr~~~~------------------------------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~  272 (299)
T cd02879         235 GLPLYGRAWTL------------------------------------------YDTTTVSSYVYAGTTWIGYDDVQSIAV  272 (299)
T ss_pred             Eeccccccccc------------------------------------------cCCCcceEEEEECCEEEEeCCHHHHHH
Confidence            99999999952                                          777788999998999999999999999


Q ss_pred             HHHHHHHcCCceEEEeC
Q 040722          339 KIAYAKEKRLLGYYVWR  355 (355)
Q Consensus       339 K~~~~~~~glgGv~iW~  355 (355)
                      |++||+++||||+++|+
T Consensus       273 K~~~a~~~~lgGv~~W~  289 (299)
T cd02879         273 KVKYAKQKGLLGYFAWA  289 (299)
T ss_pred             HHHHHHhCCCCeEEEEE
Confidence            99999999999999996

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>smart00636 Glyco_18 Glycosyl hydrolase family 18 Back     alignment and domain information
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit Back     alignment and domain information
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>COG3858 Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain Back     alignment and domain information
>COG3469 Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] Back     alignment and domain information
>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG1306 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside [] Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>PLN02495 oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PRK14581 hmsF outer membrane N-deacetylase; Provisional Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
3aqu_A356 Crystal Structure Of A Class V Chitinase From Arabi 1e-59
3alg_A353 Crystal Structure Of Class V Chitinase (E115q Mutan 6e-54
3alf_A353 Crystal Structure Of Class V Chitinase From Nicotia 6e-54
1guv_A366 Structure Of Human Chitotriosidase Length = 366 5e-30
1hki_A365 Crystal Structure Of Human Chitinase In Complex Wit 1e-29
1lg1_A365 Crystal Structure Of Human Chitotriosidase In Compl 1e-29
1hkk_A364 High Resoultion Crystal Structure Of Human Chitinas 1e-29
1waw_A 445 Specificity And Affinity Of Natural Product Cyclope 3e-29
4ay1_A365 Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch 4e-22
1hjv_A362 Crystal Structure Of Hcgp-39 In Complex With Chitin 8e-22
3fxy_A395 Acidic Mammalian Chinase, Catalytic Domain Length = 5e-21
2ybt_A381 Crystal Structure Of Human Acidic Chitinase In Comp 7e-21
1e9l_A377 The Crystal Structure Of Novel Mammalian Lectin Ym1 1e-19
1ljy_A361 Crystal Structure Of A Novel Regulatory 40 Kda Mamm 1e-18
2esc_A361 Crystal Structure Of A 40 Kda Protective Signalling 3e-18
1sr0_A361 Crystal Structure Of Signalling Protein From Sheep( 4e-18
1owq_A361 Crystal Structure Of A 40 Kda Signalling Protein (S 4e-18
1xhg_A361 Crystal Structure Of A 40 Kda Signalling Protein Fr 6e-18
1syt_A361 Crystal Structure Of Signalling Protein From Goat S 7e-18
1tfv_A361 Crystal Structure Of A Buffalo Signaling Glycoprote 1e-17
2pi6_A361 Crystal Structure Of The Sheep Signalling Glycoprot 1e-17
1zbv_A361 Crystal Structure Of The Goat Signalling Protein (S 2e-17
1itx_A419 Catalytic Domain Of Chitinase A1 From Bacillus Circ 7e-12
3g6l_A406 The Crystal Structure Of A Chitinase Crchi1 From Th 3e-11
1jnd_A420 Crystal Structure Of Imaginal Disc Growth Factor-2 3e-10
1w9p_A433 Specificity And Affinity Of Natural Product Cyclope 1e-09
1wno_A395 Crystal Structure Of A Native Chitinase From Asperg 2e-09
1d2k_A392 C. Immitis Chitinase 1 At 2.2 Angstroms Resolution 7e-09
1ll7_A392 Structure Of The E171q Mutant Of C. Immitis Chitina 7e-09
1ll6_A392 Structure Of The D169n Mutant Of C. Immitis Chitina 8e-09
1h0g_A499 Complex Of A Chitinase With The Natural Product Cyc 8e-09
1e15_A499 Chitinase B From Serratia Marcescens Length = 499 9e-09
1ogb_A499 Chitinase B From Serratia Marcescens Mutant D142n L 9e-09
1e6n_B499 Chitinase B From Serratia Marcescens Inactive Mutan 9e-09
1ur9_A499 Interactions Of A Family 18 Chitinase With The Desi 9e-09
1e6z_A498 Chitinase B From Serratia Marcescens Wildtype In Co 1e-08
1goi_A499 Crystal Structure Of The D140n Mutant Of Chitinase 3e-08
3ars_A584 Crystal Structure Analysis Of Chitinase A From Vibr 9e-08
3b8s_A584 Crystal Structure Of Wild-Type Chitinase A From Vib 3e-07
3b9a_A584 Crystal Structure Of Vibrio Harveyi Chitinase A Com 3e-07
1eib_A540 Crystal Structure Of Chitinase A Mutant D313a Compl 5e-06
2wly_A548 Chitinase A From Serratia Marcescens Atcc990 In Com 6e-06
1rd6_A563 Crystal Structure Of S. Marcescens Chitinase A Muta 6e-06
2wk2_A540 Chitinase A From Serratia Marcescens Atcc990 In Com 6e-06
1k9t_A540 Chitinase A Complexed With Tetra-N-Acetylchitotrios 2e-05
1ffr_A540 Crystal Structure Of Chitinase A Mutant Y390f Compl 2e-05
1ctn_A540 Crystal Structure Of A Bacterial Chitinase At 2.3 A 2e-05
1ehn_A540 Crystal Structure Of Chitinase A Mutant E315q Compl 2e-05
1edq_A540 Crystal Structure Of Chitinase A From S. Marcescens 2e-05
1nh6_A540 Structure Of S. Marcescens Chitinase A, E315l, Comp 2e-05
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 190/318 (59%), Gaps = 11/318 (3%)
Query: 40  ISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQG 99
           ++ I+  LFTHL C  AD+NS T Q+++S  ++  + + F  TV++ NPS+  LLSIG G
Sbjct: 18  VTDIDSSLFTHLFCAFADLNSQTNQVTVS-SANQPKFSTFTQTVQRRNPSVKTLLSIGGG 76
Query: 100 MDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEW 159
           +  + + Y+SM  N + RKSFIDSSIR+AR YGF GLD  W  P+++T+M N G L  EW
Sbjct: 77  I-ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREW 135
Query: 160 RIAATKLEAKNSSRQQSQLILTARFLYSPPANS--YLLNSIQRNLNWVHAVTASYYEPVS 217
           R A   + A+ SS  + +L+L A   YS    S  Y ++++  +L+WV+ +   +Y P  
Sbjct: 136 RSA---VVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGW 192
Query: 218 TNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYAWTLVKPEDNGI 277
           +  T PPAAL+  S+ G   S D   ++WI+ GL A K V+G P+YGYAW L     +  
Sbjct: 193 SRVTGPPAALFDPSNAG--PSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSY 250
Query: 278 GAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVR 337
            A  TG A+  +G + Y +I+ +I +       +YN+  V +Y    T W G+DD +++ 
Sbjct: 251 YAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTVVGDYCYAGTNWIGYDDNQSIV 308
Query: 338 AKIAYAKEKRLLGYYVWR 355
            K+ YAK++ LLGY+ W 
Sbjct: 309 TKVRYAKQRGLLGYFSWH 326
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 Back     alignment and structure
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 Back     alignment and structure
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 Back     alignment and structure
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 Back     alignment and structure
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 Back     alignment and structure
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 Back     alignment and structure
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 Back     alignment and structure
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 Back     alignment and structure
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 Back     alignment and structure
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 Back     alignment and structure
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 Back     alignment and structure
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 Back     alignment and structure
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 Back     alignment and structure
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 Back     alignment and structure
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 Back     alignment and structure
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 Back     alignment and structure
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 Back     alignment and structure
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 Back     alignment and structure
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 Back     alignment and structure
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 Back     alignment and structure
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 Back     alignment and structure
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 Back     alignment and structure
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 Back     alignment and structure
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 Back     alignment and structure
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 Back     alignment and structure
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 Back     alignment and structure
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 Back     alignment and structure
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 Back     alignment and structure
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 Back     alignment and structure
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 Back     alignment and structure
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 Back     alignment and structure
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 Back     alignment and structure
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 Back     alignment and structure
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 Back     alignment and structure
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 Back     alignment and structure
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 Back     alignment and structure
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 Back     alignment and structure
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 Back     alignment and structure
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 Back     alignment and structure
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 Back     alignment and structure
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 Back     alignment and structure
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 5e-82
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 4e-81
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 3e-67
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 9e-66
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 8e-65
1wb0_A 445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 3e-63
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 1e-60
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 5e-45
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 4e-44
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 4e-43
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 8e-41
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 7e-40
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 1e-38
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 6e-38
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 2e-37
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 6e-37
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 1e-34
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 1e-33
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 3e-28
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 3e-28
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 3e-25
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 3e-24
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 9e-13
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 8e-11
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 9e-09
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 8e-08
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 2e-06
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 2e-05
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 Back     alignment and structure
 Score =  252 bits (647), Expect = 5e-82
 Identities = 125/333 (37%), Positives = 194/333 (58%), Gaps = 11/333 (3%)

Query: 24  KPWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTV 83
           +  ++  Y   +    ++ I+  LFTHL C  AD+NS T Q+++S  ++  + + F  TV
Sbjct: 2   QTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVS-SANQPKFSTFTQTV 60

Query: 84  EKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAP 143
           ++ NPS+  LLSIG G   + + Y+SM  N + RKSFIDSSIR+AR YGF GLD  W  P
Sbjct: 61  QRRNPSVKTLLSIG-GGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 119

Query: 144 NTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARFLYSPP--ANSYLLNSIQRN 201
           +++T+M N G L  EWR A   + A+ SS  + +L+L A   YS    +  Y ++++  +
Sbjct: 120 SSATEMTNFGTLLREWRSA---VVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASS 176

Query: 202 LNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLP 261
           L+WV+ +   +Y P  +  T PPAAL+  S+ G   S D   ++WI+ GL A K V+G P
Sbjct: 177 LDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFP 234

Query: 262 FYGYAWTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYF 321
           +YGYAW L     +   A  TG A+  +G + Y +I+ +I +       +YN+  V +Y 
Sbjct: 235 YYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTVVGDYC 292

Query: 322 STRTIWFGFDDVEAVRAKIAYAKEKRLLGYYVW 354
              T W G+DD +++  K+ YAK++ LLGY+ W
Sbjct: 293 YAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSW 325
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Length = 289 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 100.0
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 100.0
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 100.0
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 100.0
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 100.0
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 100.0
1wb0_A 445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 100.0
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 100.0
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 100.0
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 100.0
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 100.0
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 100.0
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 100.0
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 100.0
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 100.0
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 100.0
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 100.0
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 100.0
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 100.0
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 100.0
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 100.0
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 100.0
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 100.0
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 100.0
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 100.0
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 100.0
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 100.0
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 100.0
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 100.0
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 99.97
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 99.97
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 99.97
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 99.96
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 99.95
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 99.95
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 99.95
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 99.94
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 99.93
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 99.89
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 99.87
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 99.82
2vtf_A 626 Endo-beta-N-acetylglucosaminidase; hydrolase, fami 97.91
2w91_A 653 Endo-beta-N-acetylglucosaminidase D; hydrolase, N- 97.81
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 95.31
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 91.08
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 90.09
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 89.85
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 89.65
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 88.52
2e8y_A 718 AMYX protein, pullulanase; multiple domain, beta-a 88.22
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 87.69
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 86.72
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 86.61
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 85.9
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 85.43
3vmn_A 643 Dextranase; TIM barrel, immunoglobrin fold, greek- 84.22
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 84.11
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 84.05
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 83.35
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 82.86
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 82.28
2ya0_A 714 Putative alkaline amylopullulanase; hydrolase, gly 81.99
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 81.42
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 81.04
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 80.18
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Back     alignment and structure
Probab=100.00  E-value=4.5e-72  Score=525.14  Aligned_cols=321  Identities=39%  Similarity=0.734  Sum_probs=293.0

Q ss_pred             CCEEEEEEcCCCCCCCCCCCCCCCcEEEEeeEEEeCCCcEEeeCCCCChhHHHHHHHHHHhhCCCcEEEEEEeCCCCCCC
Q 040722           25 PWIRVGYLNLSKVSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVDTVEKENPSITILLSIGQGMDTNY  104 (355)
Q Consensus        25 ~~~vvgy~~~~~~~~~~~~~~~~~thii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~p~~kvllsiGg~~~~~~  104 (355)
                      +++++|||...+.+.+++++.++||||+|+|+.++++++++.+. +.++..+..+++.+|+++|++|+++|||||.. ++
T Consensus         2 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~-~~~~~~~~~~~~~lk~~~~~lkvllsiGG~~~-~~   79 (353)
T 3alf_A            2 QNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRKNPSVKTFLSIAGGRA-NS   79 (353)
T ss_dssp             CCEEEEEEEGGGCCCGGGCCGGGCSEEEEEEEEEETTTTEEECC-HHHHHHHHHHHHHHHHHCTTCEEEEEEECTTS-CH
T ss_pred             CceEEEEEecCCCCCHhHCCcccCCEEEEEEEEeeCCCCEEEeC-CccHHHHHHHHHHHHhhCCCCeEEEEECCCCC-Cc
Confidence            47899999555678999999999999999999999987788877 44456788888889999999999999999986 57


Q ss_pred             cchhhhhcChhhHHHHHHHHHHHHHHcCCCeEEEEeeCCCCCcccchHHHHHHHHHHHHhhHHHhhccCCCCcEEEEEEe
Q 040722          105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARF  184 (355)
Q Consensus       105 ~~~~~~~~~~~~r~~fi~~l~~~l~~~~~DGididwe~~~~~~~~~~~~~~l~~l~~~~l~~~~~~~g~~~~~~~ls~a~  184 (355)
                      ..|+.++++++.|++||+++++++++|+|||||||||+|..++|+.+|+.||++||+ +|+++.+.+|  +++++||+++
T Consensus        80 ~~f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~-~l~~~~~~~~--~~~~~Ls~a~  156 (353)
T 3alf_A           80 TAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRT-AINTEARNSG--RAALLLTAAV  156 (353)
T ss_dssp             HHHHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHH-HHHHHHHHHC--SCCCEEEEEE
T ss_pred             hhHHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHH-HHHHhhhhcC--CCceEEEEec
Confidence            889999999999999999999999999999999999999777899999999999999 9998876666  5679999999


Q ss_pred             cCCCCCC--ccchhhhhccccEEEeeecccCCC-CCCCCCCCCCcCCCCCCCCCcccHHHHHHHHHHCCCCCCceEEeee
Q 040722          185 LYSPPAN--SYLLNSIQRNLNWVHAVTASYYEP-VSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLP  261 (355)
Q Consensus       185 ~~~~~~~--~~~~~~l~~~vD~v~lm~yd~~~~-~~~~~~~~~apl~~~~~~~~~~~~~~~v~~~~~~g~~~~Kl~lglp  261 (355)
                      |+.+...  .|++++|.+++|||+||+||++++ |....++|+||||++..   ..+++.+|+.|++.|+|++||+||||
T Consensus       157 ~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~~w~~~~~g~~a~l~~~~~---~~~~~~~v~~~~~~gvp~~KlvlGip  233 (353)
T 3alf_A          157 SNSPRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIP  233 (353)
T ss_dssp             ESSSEETTEECCHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTT---CCSHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred             ccCchhhhcCCCHHHHhhhccEEEEEEeeccCCCCCCCCCCCCCcCcCCCC---CccHHHHHHHHHHcCCChHHEEEEeC
Confidence            9765432  689999999999999999999998 86578999999998765   57999999999999999999999999


Q ss_pred             cceeeeeecCCCCCCCCCcccCC---CCCCCcccchHHHHHHHHhCCCCeeEEEecceeEEEEEeCCEEEEECCHHHHHH
Q 040722          262 FYGYAWTLVKPEDNGIGAAATGP---ALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTIWFGFDDVEAVRA  338 (355)
Q Consensus       262 ~yG~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~S~~~  338 (355)
                      +|||.|++.++.++++++|+.|+   ++...|.++|.|||+++.+.+  +...||+.+++||++.+++||+|||++|++.
T Consensus       234 ~YGr~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~ei~~~~~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~  311 (353)
T 3alf_A          234 FYGYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATIVGDYCYSGSNWISYDDTQTVRN  311 (353)
T ss_dssp             SEEEEEEESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHH
T ss_pred             CceeeeeccCCcCCCCCCCCCCCCCCCCCCCCeEcHHHHHHHHhhCC--CeEEEccccceEEEEeCCEEEEcCCHHHHHH
Confidence            99999999998899999998877   556779999999999998888  9999999999999998899999999999999


Q ss_pred             HHHHHHHcCCceEEEeC
Q 040722          339 KIAYAKEKRLLGYYVWR  355 (355)
Q Consensus       339 K~~~~~~~glgGv~iW~  355 (355)
                      |++||+++||||+++|+
T Consensus       312 K~~~~~~~gLgGv~~W~  328 (353)
T 3alf_A          312 KVNYVKGRGLLGYFAWH  328 (353)
T ss_dssp             HHHHHHHTTCSEEEEEC
T ss_pred             HHHHHHhCCCCEEEEEe
Confidence            99999999999999996
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Back     alignment and structure
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* Back     alignment and structure
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 355
d1goia2356 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic 3e-29
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 2e-27
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 0.001
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 3e-27
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 6e-04
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 7e-27
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 2e-26
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 0.001
d1ll7a1330 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( 2e-25
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 1e-24
d1jnda1327 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f 2e-22
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 5e-18
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 4e-17
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 3e-04
d1edta_265 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St 4e-11
d2ebna_285 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 4e-11
d1nara_289 c.1.8.5 (A:) Seed storage protein {Vicia narbonens 6e-11
d1vf8a270 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo 6e-09
d1wb0a268 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo 4e-06
d2hvma_273 c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para 6e-06
d1eoka_282 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 2e-05
d1itxa272 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul 3e-05
d2pi6a268 d.26.3.1 (A:240-307) Signal processing protein (SP 5e-05
d1ta3a_274 c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { 1e-04
d1edqa373 d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc 5e-04
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase B, catalytic domain
species: Serratia marcescens [TaxId: 615]

 Score =  113 bits (284), Expect = 3e-29
 Identities = 60/328 (18%), Positives = 113/328 (34%), Gaps = 55/328 (16%)

Query: 37  VSTISGINYDLFTHLICPSADINSTTYQLSLSLPSDDNQIAKFVD---TVEKENPSITIL 93
           VS I+       TH+     DINS     +    ++D +    V+    ++  NPS+ I+
Sbjct: 31  VSNITPAKAKQLTHINFSFLDINSNLE-CAWDPATNDAKARDVVNRLTALKAHNPSLRIM 89

Query: 94  LSIG-----QGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTD 148
            SIG       +  +++ Y + V+  + R  F  S +RI + YGF G++  W     + +
Sbjct: 90  FSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWE-YPQAAE 148

Query: 149 MFNVGLLFDEWRIAATKLEAKNSSRQQSQLILTARFLYSPPANSYL--LNSIQRNLNWVH 206
           +        E R    +    +  +     +  A    +   + Y   L  I   L++++
Sbjct: 149 VDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYIN 208

Query: 207 AVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLSADKLVMGLPFYGYA 266
            +T     P     T   AAL+G ++G                        +     G++
Sbjct: 209 LMTYDLAGPWE-KVTNHQAALFGDAAG------------------PTFYNALREANLGWS 249

Query: 267 WTLVKPEDNGIGAAATGPALHGNGLVTYKEIKNYIKNYCPNVQVMYNTIYVMNYFSTRTI 326
           W  +        +     A               ++ +     V    I +         
Sbjct: 250 WEELTRAFPSPFSLTVDAA---------------VQQHLMMEGVPSAKIVM--------- 285

Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYVW 354
              FDD E+ + K  Y K+++L G   W
Sbjct: 286 GVPFDDAESFKYKAKYIKQQQLGGVMFW 313
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273 Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282 Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72 Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
d1w9pa1333 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 100.0
d2pi6a1292 Signal processing protein (SPC-40, MGP-40) {Sheep 100.0
d1kfwa1374 Psychrophilic chitinase B {Arthrobacter sp., tad20 100.0
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 100.0
d1itxa1347 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 100.0
d1edqa2358 Chitinase A, catalytic domain {Serratia marcescens 100.0
d1ll7a1330 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 100.0
d1vf8a1302 Chitinase-like lectin ym1, saccharide binding doma 100.0
d1jnda1327 Imaginal disc growth factor-2 {Fruit fly (Drosophi 100.0
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 100.0
d1nara_289 Seed storage protein {Vicia narbonensis, Narbonin 100.0
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 99.96
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.95
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 99.95
d1ta3a_274 Xylanase inhibitor protein I, XIP-I {Wheat (Tritic 99.93
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 99.92
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.74
d1vf8a270 Chitinase-like lectin ym1 {Mouse (Mus musculus) [T 99.45
d1wb0a268 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 99.32
d2pi6a268 Signal processing protein (SPC-40, MGP-40) {Sheep 99.25
d1itxa272 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 99.0
d1edqa373 Chitinase A {Serratia marcescens [TaxId: 615]} 98.9
d1kfwa261 Psychrophilic chitinase B {Arthrobacter sp., tad20 98.7
d1jnda292 Imaginal disc growth factor-2 {Fruit fly (Drosophi 98.69
d1ll7a262 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 98.05
d1w9pa262 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 98.04
d1goia388 Chitinase B {Serratia marcescens [TaxId: 615]} 98.04
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 94.05
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 91.82
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 91.75
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 88.57
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 87.62
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 84.73
d1vyra_363 Pentaerythritol tetranirate reductase {Enterobacte 84.46
d1ps9a1330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 84.44
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 84.11
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 83.83
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 83.52
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 81.75
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 81.38
d2aama1285 Hypothetical protein TM1410 {Thermotoga maritima [ 81.06
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 80.16
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase 1
species: Aspergillus fumigatus [TaxId: 5085]

Probab=100.00  E-value=2.6e-55  Score=405.66  Aligned_cols=239  Identities=19%  Similarity=0.321  Sum_probs=203.9

Q ss_pred             CCCCEEEEEEcCC----CCCCCCCCCCCCCcEEEEeeEEEeCCCcEEeeCCC------------------CChhHHHHHH
Q 040722           23 AKPWIRVGYLNLS----KVSTISGINYDLFTHLICPSADINSTTYQLSLSLP------------------SDDNQIAKFV   80 (355)
Q Consensus        23 ~~~~~vvgy~~~~----~~~~~~~~~~~~~thii~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~   80 (355)
                      ++.++|||||++|    +.+.+++||.++||||+|+|+.++++++++...++                  .....+..+.
T Consensus         2 ~~g~kvv~Yy~~W~~y~~~~~~~~i~~~~~THI~yaFa~i~~~~g~~~~~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~   81 (333)
T d1w9pa1           2 SSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLY   81 (333)
T ss_dssp             BCCBEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEEEECTTTCCEEESCHHHHHTCCCTTCCSSCCSSCCCHHHHHHH
T ss_pred             CCCCEEEEEECcccccCCCCChhHCCcccCCeEEEeeEEecCCCCeEEecChHHhhccccCCccccccccchhhHHHHHH
Confidence            5678999999986    35789999999999999999999998888876521                  1123566665


Q ss_pred             HHHHhhCCCcEEEEEEeCCCCCCCcchhhhhcChhhHHHHHHHHHHHHHHcCCCeEEEEeeCCCCCcccchHHHHHHHHH
Q 040722           81 DTVEKENPSITILLSIGQGMDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFQGLDFAWTAPNTSTDMFNVGLLFDEWR  160 (355)
Q Consensus        81 ~~lk~~~p~~kvllsiGg~~~~~~~~~~~~~~~~~~r~~fi~~l~~~l~~~~~DGididwe~~~~~~~~~~~~~~l~~l~  160 (355)
                       .+|+++|++||++|||||..  ++.|+.++++++.|++||++++++|++|+|||||||||+|...++..+|+.||++||
T Consensus        82 -~lk~~~p~lKvllSiGGw~~--s~~f~~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~~~~llkelr  158 (333)
T d1w9pa1          82 -LLKKQNRNLKVLLSIGGWTY--SPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVR  158 (333)
T ss_dssp             -HHHHHCTTCEEEEEEECTTT--GGGHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHH
T ss_pred             -HHHhccCCceEEEEEeCCcC--CCcccccccCHHHHHHHHHHHHHHHHHhcCCceeeeeeecccccccchHHHHHHHHH
Confidence             69999999999999999986  889999999999999999999999999999999999999998778889999999999


Q ss_pred             HHHhhHHHhhccCCCCcEEEEEEecCCCCCC-ccchhhhhccccEEEeeecccCCCCCCCCCCCCCcCCCCCCC--CCcc
Q 040722          161 IAATKLEAKNSSRQQSQLILTARFLYSPPAN-SYLLNSIQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSG--GFAR  237 (355)
Q Consensus       161 ~~~l~~~~~~~g~~~~~~~ls~a~~~~~~~~-~~~~~~l~~~vD~v~lm~yd~~~~~~~~~~~~~apl~~~~~~--~~~~  237 (355)
                      + +|+.......+ ++++.||+++|+.+... .++++++.++||||+||+||++++| +..++|++|||.+...  ....
T Consensus       159 ~-~L~~~~~~~~~-~~~~~ls~a~~~~~~~~~~~d~~~i~~~vD~invMtYD~~g~~-~~~tg~~aply~~~~~~~~~~~  235 (333)
T d1w9pa1         159 T-ALDSYSAANAG-GQHFLLTVASPAGPDKIKVLHLKDMDQQLDFWNLMAYDYAGSF-SSLSGHQANVYNDTSNPLSTPF  235 (333)
T ss_dssp             H-HHHHHHHHHST-TCCCEEEEEECCSHHHHHHSCHHHHHTTCSEEEECCCCCSSTT-SSSCCCSSCSSCCTTCGGGCSC
T ss_pred             H-HHHhhhhhhcc-CCceEEEEEccCChhhhhccchHHHhhcCCeEEEeeeccCCCC-CCCCCCCccccCCCCCCccCCc
Confidence            9 99876433221 46799999999765443 6899999999999999999999997 4568999999964431  1246


Q ss_pred             cHHHHHHHHHHCCCCCCceEEeeecceeee
Q 040722          238 STDQVLKAWIERGLSADKLVMGLPFYGYAW  267 (355)
Q Consensus       238 ~~~~~v~~~~~~g~~~~Kl~lglp~yG~~~  267 (355)
                      +++.+|++|++.|+|++||+|||||||+.|
T Consensus       236 nv~~av~~~~~~Gvp~~KlvlGiPfyg~~~  265 (333)
T d1w9pa1         236 NTQTALDLYRAGGVPANKIVLGMPLDNPQV  265 (333)
T ss_dssp             CHHHHHHHHHHTTCCGGGEEEEEESCCHHH
T ss_pred             cHHHHHHHHHHCCCCHHHeEEEeCCCchHH
Confidence            899999999999999999999999987533
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure