Citrus Sinensis ID: 040795


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQDQGT
ccEEEEccEEEEcccccccEEEEEccEEEEEEccccccEEEEEEEcccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHccccccccccEEccccccc
cEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccEEEcccHHHcccccccccccccHHHHHHHHHHcccccccHHHHEEEccccc
glqikkdgkwvavkplpdafvVNIGDAleiftngtyrsiehrATVNSVKERLSfatfynpkldgelgpapslitpktpalfkkINVVDYFKRFFSTELRGKSFIDFLKIQDQGT
glqikkdgkwvavkplpdAFVVNIGDALEIFTNgtyrsiehratvnsvkeRLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFstelrgksfidflkiqdqgt
GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQDQGT
*******GKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKI*****
GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDF*KIQ****
GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQDQGT
GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQ****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQDQGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query114 2.2.26 [Sep-21-2011]
D4N502360 Codeine O-demethylase OS= N/A no 0.956 0.302 0.596 3e-35
D4N501364 Probable 2-oxoglutarate/F N/A no 0.956 0.299 0.590 7e-34
Q39224358 Protein SRG1 OS=Arabidops no no 0.956 0.304 0.614 2e-32
D4N500364 Thebaine 6-O-demethylase N/A no 0.956 0.299 0.572 3e-31
A2A1A0352 S-norcoclaurine synthase N/A no 0.947 0.306 0.495 8e-25
Q9M547334 Flavonol synthase/flavano N/A no 0.780 0.266 0.471 6e-19
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.956 0.301 0.387 6e-19
Q07512348 Flavonol synthase/flavano N/A no 0.780 0.255 0.460 5e-18
A2Z1W9322 1-aminocyclopropane-1-car N/A no 0.894 0.316 0.398 2e-17
Q9MB94319 1-aminocyclopropane-1-car N/A no 0.815 0.291 0.416 2e-17
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function desciption
 Score =  146 bits (369), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/109 (59%), Positives = 87/109 (79%)

Query: 1   GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
           GLQI+K+ +W+++KPLPDAF+VN+GD LEI TNG YRS+EHRA VNS KERLS ATF++ 
Sbjct: 252 GLQIRKEERWISIKPLPDAFIVNVGDILEIMTNGIYRSVEHRAVVNSTKERLSIATFHDS 311

Query: 61  KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKI 109
           KL+ E+GP  SL+TP+TPALFK+    D  K   S +L GKSF+D++++
Sbjct: 312 KLESEIGPISSLVTPETPALFKRGRYEDILKENLSRKLDGKSFLDYMRM 360




Non-heme dioxygenase catalyzing the conversion of codeine to morphine. Catalyzes also, with lower efficiency, the 3-O-demethylation of thebaine to oripavine and of (S)-scoulerine to 3-O-demethylscoulerine. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, pavine or noscapine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 3EC: 2
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9M547|FLS_EUSER Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=FLS PE=2 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description
>sp|A2Z1W9|ACCO1_ORYSI 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1 Back     alignment and function description
>sp|Q9MB94|ACCO_PRUMU 1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query114
255557465 251 Leucoanthocyanidin dioxygenase, putative 0.973 0.442 0.684 1e-41
449434270 358 PREDICTED: protein SRG1-like [Cucumis sa 0.982 0.312 0.669 5e-40
388505776 237 unknown [Lotus japonicus] 0.973 0.468 0.657 5e-40
225462507 366 PREDICTED: protein SRG1 [Vitis vinifera] 0.964 0.300 0.672 8e-40
147776748 395 hypothetical protein VITISV_032872 [Viti 0.956 0.275 0.669 1e-39
224148314151 predicted protein [Populus trichocarpa] 0.973 0.735 0.684 1e-39
297734657 316 unnamed protein product [Vitis vinifera] 0.956 0.344 0.669 1e-39
255557471 366 Flavonol synthase/flavanone 3-hydroxylas 0.982 0.306 0.625 2e-39
224061381 359 predicted protein [Populus trichocarpa] 0.973 0.309 0.684 2e-39
147766526 226 hypothetical protein VITISV_008971 [Viti 0.956 0.482 0.651 3e-39
>gi|255557465|ref|XP_002519763.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223541180|gb|EEF42736.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 76/111 (68%), Positives = 98/111 (88%)

Query: 1   GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
           GLQ+KKDGK+V VKPLPDAF++N+GD LE+ TNG Y+S+EHRATVNS +ER+S ATFY+P
Sbjct: 138 GLQVKKDGKYVPVKPLPDAFIINVGDILEVVTNGIYKSVEHRATVNSEEERISIATFYSP 197

Query: 61  KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQD 111
           KLDG++GPAPSLITP+TP+ F+KI V D+ + FFS EL GK+F+DFL+IQ+
Sbjct: 198 KLDGDMGPAPSLITPQTPSSFRKIAVADFLRVFFSKELNGKAFLDFLRIQN 248




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434270|ref|XP_004134919.1| PREDICTED: protein SRG1-like [Cucumis sativus] gi|449479526|ref|XP_004155625.1| PREDICTED: protein SRG1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388505776|gb|AFK40954.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|225462507|ref|XP_002269087.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|297740615|emb|CBI30797.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147776748|emb|CAN72414.1| hypothetical protein VITISV_032872 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224148314|ref|XP_002336631.1| predicted protein [Populus trichocarpa] gi|222836386|gb|EEE74793.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297734657|emb|CBI16708.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255557471|ref|XP_002519766.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223541183|gb|EEF42739.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224061381|ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|222847709|gb|EEE85256.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147766526|emb|CAN72012.1| hypothetical protein VITISV_008971 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query114
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.964 0.304 0.581 8.8e-31
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.956 0.304 0.614 8.8e-31
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.956 0.308 0.605 8.8e-31
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.956 0.306 0.577 1.6e-29
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.956 0.306 0.577 5.6e-29
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.956 0.299 0.481 2e-24
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.947 0.310 0.436 7.8e-23
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.912 0.280 0.462 4.3e-22
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.947 0.309 0.431 1.9e-21
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.938 0.303 0.439 1.7e-20
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 64/110 (58%), Positives = 82/110 (74%)

Query:     1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
             GLQIKK+GKW  VKPL +AF+VN+GD LEI TNGTYRSIEHRA VN  KERLS ATF+N 
Sbjct:   250 GLQIKKNGKWFFVKPLQNAFIVNVGDVLEIITNGTYRSIEHRAMVNLEKERLSIATFHNT 309

Query:    61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQ 110
              +D E+GPA SL+  +  A F+ +   DY    FS EL+GK+++D ++I+
Sbjct:   310 GMDKEIGPARSLVQRQEAAKFRSLKTKDYLNGLFSRELKGKAYLDAMRIE 359




GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009686 "gibberellin biosynthetic process" evidence=RCA
GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00007249001
SubName- Full=Chromosome undetermined scaffold_186, whole genome shotgun sequence; (366 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query114
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-49
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-41
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-39
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-34
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-31
PLN02947374 PLN02947, PLN02947, oxidoreductase 3e-29
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-27
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-26
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-25
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 4e-24
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 5e-24
PLN02704335 PLN02704, PLN02704, flavonol synthase 5e-24
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 6e-23
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-22
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-22
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-21
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-19
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-19
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 8e-17
PLN02485329 PLN02485, PLN02485, oxidoreductase 9e-17
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-16
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-15
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-14
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 4e-14
PLN02997325 PLN02997, PLN02997, flavonol synthase 7e-14
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 6e-09
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
 Score =  160 bits (406), Expect = 1e-49
 Identities = 68/109 (62%), Positives = 83/109 (76%)

Query: 1   GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
           GLQIKKDGKWV+VKPLP+A VVN+GD LEI TNGTYRSIEHR  VNS KERLS ATF+N 
Sbjct: 249 GLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNT 308

Query: 61  KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKI 109
            +  E+GPA SL+  +  ALFK +   +YF   FS EL GK+++D ++I
Sbjct: 309 GMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI 357


Length = 357

>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 114
PLN02216357 protein SRG1 100.0
PLN02904357 oxidoreductase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02997325 flavonol synthase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 99.98
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.97
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 99.95
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.77
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 89.71
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 86.02
TIGR02466201 conserved hypothetical protein. This family consis 85.09
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 83.15
>PLN02216 protein SRG1 Back     alignment and domain information
Probab=100.00  E-value=6.8e-38  Score=242.41  Aligned_cols=109  Identities=62%  Similarity=1.013  Sum_probs=105.2

Q ss_pred             CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795            1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL   80 (114)
Q Consensus         1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~   80 (114)
                      ||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.+..++|||++||++|+.|++|+|+++++++++|++
T Consensus       249 GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~  328 (357)
T PLN02216        249 GLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAAL  328 (357)
T ss_pred             ceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCC
Confidence            89999999999999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCceeHHHHHHHHHhcccCCccccceeec
Q 040795           81 FKKINVVDYFKRFFSTELRGKSFIDFLKI  109 (114)
Q Consensus        81 y~~~~~~e~~~~~~~~~~~~~~~~~~~~~  109 (114)
                      |++++++||+..+++..+.++..++.+||
T Consensus       329 Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        329 FKSLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             CCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            99999999999999999888888888875



>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query114
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-16
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-16
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-16
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 1e-15
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-06
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 3e-04
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure

Iteration: 1

Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 3/105 (2%) Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60 GLQ+ KDG+W+ V P + VVN+GD LE+ TNG Y+S+ HR R S A+FYNP Sbjct: 194 GLQLLKDGQWIDVPPXRHSIVVNLGDQLEVITNGKYKSVXHRVIAQKDGARXSLASFYNP 253 Query: 61 KLDGELGPAPSLI---TPKTPALFKKINVVDYFKRFFSTELRGKS 102 D + PAP+L+ + ++ K DY K + + + K Sbjct: 254 GSDAVIYPAPALVEKEAEENKQVYPKFVFDDYXKLYAGLKFQAKE 298
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query114
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 3e-55
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 3e-54
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 6e-34
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 3e-33
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-27
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-26
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  173 bits (441), Expect = 3e-55
 Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 4/115 (3%)

Query: 1   GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
           GLQ+ KDG+W+ V P+  + VVN+GD LE+ TNG Y+S+ HR        R+S A+FYNP
Sbjct: 194 GLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNP 253

Query: 61  KLDGELGPAPSLI---TPKTPALFKKINVVDYFKRFFSTELRGKS-FIDFLKIQD 111
             D  + PAP+L+     +   ++ K    DY K +   + + K    + +K  +
Sbjct: 254 GSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAME 308


>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query114
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 99.96
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.65
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
Probab=100.00  E-value=3.9e-37  Score=233.81  Aligned_cols=110  Identities=37%  Similarity=0.702  Sum_probs=98.1

Q ss_pred             CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCC---C
Q 040795            1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPK---T   77 (114)
Q Consensus         1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~---~   77 (114)
                      ||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|||++||++|+.|++|+|++++++++   +
T Consensus       194 GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~  273 (319)
T 1w9y_A          194 GLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEEN  273 (319)
T ss_dssp             CEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC-------
T ss_pred             eeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccC
Confidence            8999999999999999999999999999999999999999999999889999999999999999999999999987   5


Q ss_pred             CCCCCceeHHHHHHHHHhcccCCccc-cceeecc
Q 040795           78 PALFKKINVVDYFKRFFSTELRGKSF-IDFLKIQ  110 (114)
Q Consensus        78 p~~y~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~  110 (114)
                      |++|++++++||+..+++..+.++.. ++.+|+.
T Consensus       274 p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~  307 (319)
T 1w9y_A          274 KQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM  307 (319)
T ss_dssp             -CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred             ccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence            99999999999999999888877654 5666654



>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 114
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 8e-30
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 6e-27
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-18
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-18
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
 Score =  107 bits (267), Expect = 8e-30
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 2   LQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPK 61
           LQ+  +GKWV  K +PD+ V++IGD LEI +NG Y+SI HR  VN  K R+S+A F  P 
Sbjct: 248 LQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 307

Query: 62  LDGE-LGPAPSLITPKTPALFKKINVVDYFK-RFFSTEL 98
            D   L P P +++ ++PA F       + + + F  E 
Sbjct: 308 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQ 346


>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query114
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 99.95
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]
Probab=100.00  E-value=5.8e-37  Score=228.51  Aligned_cols=102  Identities=39%  Similarity=0.751  Sum_probs=92.3

Q ss_pred             CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCC---CCC
Q 040795            1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLIT---PKT   77 (114)
Q Consensus         1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~---~~~   77 (114)
                      |||+.++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.+++.+|||++||++|+.|++|+|++++++   +++
T Consensus       193 gl~~~~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~  272 (307)
T d1w9ya1         193 GLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEEN  272 (307)
T ss_dssp             CEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC-------
T ss_pred             eEEEecCCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCceeecCCCCCcEEEEEEeeCCCCCEEeCCHHHhcccCccC
Confidence            68999999999999999999999999999999999999999999998899999999999999999999999986   567


Q ss_pred             CCCCCceeHHHHHHHHHhcccCCcc
Q 040795           78 PALFKKINVVDYFKRFFSTELRGKS  102 (114)
Q Consensus        78 p~~y~~~~~~e~~~~~~~~~~~~~~  102 (114)
                      |++|+++|++||++.+++..+.++.
T Consensus       273 p~~y~~~t~~ey~~~~~~~~~~~~~  297 (307)
T d1w9ya1         273 KQVYPKFVFDDYMKLYAGLKFQAKE  297 (307)
T ss_dssp             -CCCCCEEHHHHHHTTTTTTCSSHH
T ss_pred             CCCCCCeeHHHHHHHHHhccCCccc
Confidence            8999999999999998888877644



>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure