Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
ID Alignment Graph Length
Definition
E-value
Query 114
PLN02216 357
PLN02216, PLN02216, protein SRG1
1e-49
PLN02393 362
PLN02393, PLN02393, leucoanthocyanidin dioxygenase
3e-41
PLN02758 361
PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy
2e-39
PLN02639 337
PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy
1e-34
PLN02912 348
PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy
2e-31
PLN02947 374
PLN02947, PLN02947, oxidoreductase
3e-29
PLN03178 360
PLN03178, PLN03178, leucoanthocyanidin dioxygenase
2e-27
PLN03001 262
PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy
3e-26
PLN02254 358
PLN02254, PLN02254, gibberellin 3-beta-dioxygenase
4e-25
PLN02276 361
PLN02276, PLN02276, gibberellin 20-oxidase
4e-24
PLN02299 321
PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl
5e-24
PLN02704 335
PLN02704, PLN02704, flavonol synthase
5e-24
pfam03171 96
pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe
6e-23
PLN00417 348
PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy
2e-22
PLN02904 357
PLN02904, PLN02904, oxidoreductase
2e-22
PLN02750 345
PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy
2e-21
COG3491 322
COG3491, PcbC, Isopenicillin N synthase and relate
1e-19
PLN02403 303
PLN02403, PLN02403, aminocyclopropanecarboxylate o
3e-19
PLN02156 335
PLN02156, PLN02156, gibberellin 2-beta-dioxygenase
8e-17
PLN02485 329
PLN02485, PLN02485, oxidoreductase
9e-17
PTZ00273 320
PTZ00273, PTZ00273, oxidase reductase; Provisional
1e-16
PLN02515 358
PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di
2e-15
PLN02365 300
PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy
1e-14
PLN02984 341
PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy
4e-14
PLN02997 325
PLN02997, PLN02997, flavonol synthase
7e-14
PLN03002 332
PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy
6e-09
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1
Back Hide alignment and domain information
Score = 160 bits (406), Expect = 1e-49
Identities = 68/109 (62%), Positives = 83/109 (76%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQIKKDGKWV+VKPLP+A VVN+GD LEI TNGTYRSIEHR VNS KERLS ATF+N
Sbjct: 249 GLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNT 308
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKI 109
+ E+GPA SL+ + ALFK + +YF FS EL GK+++D ++I
Sbjct: 309 GMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI 357
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein
Back Show alignment and domain information
Score = 139 bits (351), Expect = 3e-41
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+++D W+ VKP+PDAF+VNIGD +++ +N Y+S+EHR VNS KER+S A FYNP
Sbjct: 252 GLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNP 311
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTE-LRGKSFIDFLKIQ 110
K D + P L+TP PAL+ + D ++ F T+ RGKS ++ LK
Sbjct: 312 KSDLPIEPLKELVTPDRPALYPPMT-FDEYRLFIRTKGPRGKSQVESLKSP 361
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 134 bits (338), Expect = 2e-39
Identities = 52/110 (47%), Positives = 74/110 (67%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQI KD WV V P+P+A V+NIGD LE+ TNG Y+S+EHRA N K+RLS TFY P
Sbjct: 251 GLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAP 310
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQ 110
+ ELGP P L+ + P +++ N +Y + + +++L+GK ++F KI
Sbjct: 311 SYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKIL 360
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 121 bits (305), Expect = 1e-34
Identities = 48/98 (48%), Positives = 65/98 (66%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ KDGKWVAV P P AFV+NIGD L+ +NG Y+S+ HRA VN+ KER+S A+F P
Sbjct: 229 GLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCP 288
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTEL 98
D + PA L T A+++ +Y+K+F+S L
Sbjct: 289 CDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNL 326
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 112 bits (282), Expect = 2e-31
Identities = 48/110 (43%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ KDGKW+AV P+P+ F+VN+GD +++ +N Y+S+ HRA VN+ KER+S TFY P
Sbjct: 235 GLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCP 294
Query: 61 KLDGELGPAPSLITPK--TPALFKKINVVDYFKRFFSTELRGKSFIDFLK 108
D +GPA LI + + A+++ +YF++F+ T +S ID K
Sbjct: 295 SEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATESCIDSFK 344
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase
Back Show alignment and domain information
Score = 107 bits (270), Expect = 3e-29
Identities = 44/109 (40%), Positives = 68/109 (62%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQI G+WV V+P+P +FVVN+GD LEIF+NG Y+S+ HR VNS K R+S A+ ++
Sbjct: 263 GLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSL 322
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKI 109
+ +GPAP L+ + P + + + S E + K+F++ K+
Sbjct: 323 PFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKL 371
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional
Back Show alignment and domain information
Score = 102 bits (257), Expect = 2e-27
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ +GKWV K +PD+ VV+IGD LEI +NG Y+SI HR VN K R+S+A F P
Sbjct: 249 GLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEP 308
Query: 61 KLDGE-LGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQD 111
+ L P P L++ + P F + + + + ID I +
Sbjct: 309 PKEKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQDERNIDAADISN 360
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 97.8 bits (243), Expect = 3e-26
Identities = 44/107 (41%), Positives = 63/107 (58%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ KD +W+ V P+ DA ++ I D EI TNG Y+S +HRA N+ K RLS ATF++P
Sbjct: 154 GLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDP 213
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFL 107
++ PA +L T P + +I +Y ++S GK ID L
Sbjct: 214 AKTAKIAPASALSTESFPPRYCEIVYGEYVSSWYSKGPEGKRNIDAL 260
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase
Back Show alignment and domain information
Score = 96.3 bits (240), Expect = 4e-25
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 1 GLQIKKDG-KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59
GLQ+ ++G WV V P+P + VVN+GD L I +NG + S+ HRA VN + R+S A FY
Sbjct: 248 GLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYG 307
Query: 60 PKLDGELGPAPSLITPKTPALFKKINVVDY 89
P D ++ P P L+ P P L++ + +Y
Sbjct: 308 PPSDVQISPLPKLVDPNHPPLYRSVTWKEY 337
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase
Back Show alignment and domain information
Score = 93.9 bits (234), Expect = 4e-24
Identities = 37/78 (47%), Positives = 46/78 (58%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ D KW +V+P P A VVNIGD +NG Y+S HRA VNS +ER S A F P
Sbjct: 244 GLQVFVDNKWRSVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCP 303
Query: 61 KLDGELGPAPSLITPKTP 78
K D + P L+ + P
Sbjct: 304 KEDKVVRPPQELVDREGP 321
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase
Back Show alignment and domain information
Score = 92.9 bits (231), Expect = 5e-24
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ KDG+WV V P+ + VVN+GD LE+ TNG Y+S+ HR + R+S A+FYNP
Sbjct: 197 GLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNP 256
Query: 61 KLDGELGPAPSLI--TPKTPALFKKINVVDYFKRFFSTELRGK 101
D + PAP+L+ + ++ K DY K + + + K
Sbjct: 257 GSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAK 299
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase
Back Show alignment and domain information
Score = 93.3 bits (232), Expect = 5e-24
Identities = 39/89 (43%), Positives = 53/89 (59%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ +D W VK +P+A V++IGD +EI +NG Y+S+ HR TVN K R+S+ F P
Sbjct: 237 GLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEP 296
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDY 89
+ +GP P LI P FK DY
Sbjct: 297 PSELAVGPLPKLINEDNPPKFKTKKFKDY 325
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily
Back Show alignment and domain information
Score = 84.8 bits (210), Expect = 6e-23
Identities = 30/60 (50%), Positives = 37/60 (61%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ KDG W+ V P P A VVN GD L + +NG Y+S+ HR N+ ER+S A F P
Sbjct: 37 GLQFLKDGGWIDVPPGPGALVVNFGDLLLVLSNGRYKSVLHRVLPNTGGERISIAFFLRP 96
This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily. This family includes the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity EC:1.14.11.2 catalyzing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 <=> procollagen trans- 4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. Length = 96
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 89.2 bits (221), Expect = 2e-22
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ KDGKW +PD ++N+GD +EI +NG Y+S HR N KER+S ATF P
Sbjct: 242 GLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIP 301
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFID 105
D E+ P L++ P L+K V Y + FF +G+ I+
Sbjct: 302 GADKEIQPVDGLVSEARPRLYKT--VKKYVELFFKYYQQGRRPIE 344
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase
Back Show alignment and domain information
Score = 88.8 bits (220), Expect = 2e-22
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 1 GLQIKKDGK-WVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59
GLQI K WV V + A +V +GD +E+ +NG Y+S+ HR TVN +RLSFA+ ++
Sbjct: 245 GLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHS 304
Query: 60 PKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLK 108
L ++ PAP L+ PA + + + D+ S ++ + FID LK
Sbjct: 305 LPLHKKISPAPELVNENKPAAYGEFSFNDFLDYISSNDITQERFIDTLK 353
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 86.6 bits (214), Expect = 2e-21
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 1 GLQI--KKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFY 58
GLQI + DG+W+ VKP+PDAF++NIG+ ++++TN Y S EHR VNS KER S F+
Sbjct: 231 GLQISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFF 290
Query: 59 NPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELR 99
P + P LI + P +K+ N + +FF++ R
Sbjct: 291 FPSHYVNIKPLDELINEQNPPKYKEFN----WGKFFASRNR 327
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]
Back Show alignment and domain information
Score = 81.3 bits (201), Expect = 1e-19
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59
GL+++ +G W+ V P+P VVNIGD LE +TNG RS HR +R S F
Sbjct: 212 GLEVRPPNGGWLDVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLE 271
Query: 60 PKLDGELGPAPSL-----ITPKTPA-LFKKINVVDYFKRFFSTELRGKSFID 105
P D E+ P L P+ P + DY F + R +S D
Sbjct: 272 PNFDAEIAPLLPLCPEAANEPRGPGTDPDNPLLRDYATNF--LKRRLRSHPD 321
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase
Back Show alignment and domain information
Score = 79.9 bits (197), Expect = 3e-19
Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 1 GLQIKKDGKWVAVKPLP-DAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59
GL+ KDGKWV + P + VN GD LE+ +NG Y+S HR + RLS ATFYN
Sbjct: 192 GLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKNGSRLSIATFYN 251
Query: 60 PKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGK 101
P D + PAP L+ P DY K + +T+ K
Sbjct: 252 PAGDAIISPAPKLLYP------SNYRFQDYLKLYSTTKFGDK 287
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase
Back Show alignment and domain information
Score = 73.5 bits (180), Expect = 8e-17
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 1 GLQI-KKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59
GLQI KDG WV V P +F V +GD L++ TNG ++S++HR N+ + R+S F
Sbjct: 218 GLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAG 277
Query: 60 PKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRG 100
P L ++ P L+ + L+ + Y + T+L
Sbjct: 278 PPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLGD 318
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase
Back Show alignment and domain information
Score = 73.2 bits (180), Expect = 9e-17
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 2 LQIKK-DGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
LQ++ G+W+ P+P FV NIGD L+I++NG Y+S HR NS K R+ A FY
Sbjct: 228 LQVRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYET 287
Query: 61 KLDGELGP 68
D + P
Sbjct: 288 NFDAAVEP 295
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional
Back Show alignment and domain information
Score = 73.3 bits (180), Expect = 1e-16
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 1 GLQIKK-DGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59
GLQ++ G+W+ V PL +FVVNIGD +E+++NG YRS HR VN+ ER S F
Sbjct: 216 GLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHR-VVNTGVERYSMPFFCE 274
Query: 60 PKLDGELGPAPSLITPKTPALFKKINVVDYF-KRFFST 96
P + + + + + P + + VD+ KRF T
Sbjct: 275 PNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAET 312
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase
Back Show alignment and domain information
Score = 70.0 bits (171), Expect = 2e-15
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 1 GLQIKKDG--KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFY 58
GLQ +DG W+ V+P+ AFVVN+GD +NG +++ +H+A VNS RLS ATF
Sbjct: 233 GLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQ 292
Query: 59 NPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQDQ 112
NP D + P + + P L + I + ++R S +L K +DQ
Sbjct: 293 NPAPDATVYPL-KVREGEKPILEEPITFAEMYRRKMSRDLELARLKKLAKEEDQ 345
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase
Back Show alignment and domain information
Score = 67.1 bits (164), Expect = 1e-14
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 1 GLQI--KKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFY 58
GL++ G++V V PLP +VN+GD ++NG +++HR R+S A+F
Sbjct: 188 GLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRISIASFL 247
Query: 59 NPKLDGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKSFIDFLKIQD 111
D ++ P + + P L+K DY K ST+L + + +
Sbjct: 248 LGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALALITAKS 300
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 66.0 bits (161), Expect = 4e-14
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRAT-VNSVKERLSFATFYN 59
GL++ KDG+W VKP+ + VVN+GD +++ ++ Y+S+ HR N KER S F
Sbjct: 238 GLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVF 297
Query: 60 PKLD 63
P+ D
Sbjct: 298 PEED 301
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase
Back Show alignment and domain information
Score = 65.4 bits (159), Expect = 7e-14
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ KD +W+ + + A VV IGD L TNG ++++ HRA + + R+S+ F P
Sbjct: 221 GLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKTDKERLRISWPVFVAP 280
Query: 61 KLDGELGPAPSLITPKTPALFKKINVVDY 89
+ D +GP P L + P F+ + DY
Sbjct: 281 RADMSVGPLPELTGDENPPKFETLIYNDY 309
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Score = 51.6 bits (123), Expect = 6e-09
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 1 GLQIKKDG-----KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFA 55
GLQI KD KW V P+ AF+VN+GD LE ++NG ++S HR N +ER S
Sbjct: 221 GLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNG-QERYSIP 279
Query: 56 TFYNPKLD 63
F P D
Sbjct: 280 FFVEPNHD 287
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability
Query
114
PLN02216 357
protein SRG1
100.0
PLN02904 357
oxidoreductase
100.0
PLN02639 337
oxidoreductase, 2OG-Fe(II) oxygenase family protei
100.0
PLN02947 374
oxidoreductase
100.0
PLN02758 361
oxidoreductase, 2OG-Fe(II) oxygenase family protei
100.0
PLN03001 262
oxidoreductase, 2OG-Fe(II) oxygenase family protei
100.0
PLN03178 360
leucoanthocyanidin dioxygenase; Provisional
100.0
PLN02276 361
gibberellin 20-oxidase
100.0
PLN02912 348
oxidoreductase, 2OG-Fe(II) oxygenase family protei
100.0
PLN02254 358
gibberellin 3-beta-dioxygenase
100.0
PLN02393 362
leucoanthocyanidin dioxygenase like protein
100.0
PLN02365 300
2-oxoglutarate-dependent dioxygenase
100.0
PLN02299 321
1-aminocyclopropane-1-carboxylate oxidase
100.0
PLN02704 335
flavonol synthase
100.0
PLN02997 325
flavonol synthase
100.0
PLN02156 335
gibberellin 2-beta-dioxygenase
100.0
PLN02485 329
oxidoreductase
100.0
PLN02750 345
oxidoreductase, 2OG-Fe(II) oxygenase family protei
100.0
KOG0143 322
consensus Iron/ascorbate family oxidoreductases [S
100.0
PLN02515 358
naringenin,2-oxoglutarate 3-dioxygenase
100.0
PLN00417 348
oxidoreductase, 2OG-Fe(II) oxygenase family protei
100.0
PLN03002 332
oxidoreductase, 2OG-Fe(II) oxygenase family protei
100.0
PTZ00273 320
oxidase reductase; Provisional
100.0
PLN02403 303
aminocyclopropanecarboxylate oxidase
99.98
PLN02984 341
oxidoreductase, 2OG-Fe(II) oxygenase family protei
99.97
COG3491 322
PcbC Isopenicillin N synthase and related dioxygen
99.95
PF03171 98
2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent
99.77
PF13759 101
2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB
89.71
PF13640 100
2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily;
86.02
TIGR02466 201
conserved hypothetical protein. This family consis
85.09
PF12851 171
Tet_JBP: Oxygenase domain of the 2OGFeDO superfami
83.15
>PLN02216 protein SRG1
Back Hide alignment and domain information
Probab=100.00 E-value=6.8e-38 Score=242.41 Aligned_cols=109 Identities=62% Similarity=1.013 Sum_probs=105.2
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.+..++|||++||++|+.|++|+|+++++++++|++
T Consensus 249 GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~ 328 (357)
T PLN02216 249 GLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAAL 328 (357)
T ss_pred ceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCC
Confidence 89999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccceeec
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFIDFLKI 109 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 109 (114)
|++++++||+..+++..+.++..++.+||
T Consensus 329 Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 357 (357)
T PLN02216 329 FKSLTTKEYFDGLFSRELDGKAYLDAMRI 357 (357)
T ss_pred CCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence 99999999999999999888888888875
>PLN02904 oxidoreductase
Back Show alignment and domain information
Probab=100.00 E-value=2.2e-37 Score=239.62 Aligned_cols=110 Identities=36% Similarity=0.664 Sum_probs=105.0
Q ss_pred CceEEE-CCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIKK-DGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~~-~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||+. +|+|++|+|.+|++|||+||+||+||||+|||+.|||+++...+|||++||++|+.|++|+|+++++++++|+
T Consensus 245 GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~ 324 (357)
T PLN02904 245 GLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPA 324 (357)
T ss_pred eeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCC
Confidence 899995 7999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred CCCceeHHHHHHHHHhcccCCccccceeecc
Q 040795 80 LFKKINVVDYFKRFFSTELRGKSFIDFLKIQ 110 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 110 (114)
+|++++|+||++.++++...++..++.++++
T Consensus 325 ~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PLN02904 325 AYGEFSFNDFLDYISSNDITQERFIDTLKKN 355 (357)
T ss_pred cCCCCCHHHHHHHHHhcccCcchHHHHhccC
Confidence 9999999999999999998888888888775
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=100.00 E-value=3.8e-37 Score=236.62 Aligned_cols=108 Identities=45% Similarity=0.814 Sum_probs=102.4
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|+|++|||++++.++|||++||++|+.|++|+|+++++++++|++
T Consensus 229 GLQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~ 308 (337)
T PLN02639 229 GLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAV 308 (337)
T ss_pred ceEeecCCeEEeccCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCC
Confidence 89999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccceee
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFIDFLK 108 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 108 (114)
|++++++||++.++.+...++..++.++
T Consensus 309 y~p~~~~e~~~~~~~~~~~~~~~l~~~~ 336 (337)
T PLN02639 309 YRDFTYAEYYKKFWSRNLDQEHCLELFK 336 (337)
T ss_pred CCCCCHHHHHHHHHhccCCCchhhHhhc
Confidence 9999999999999998887777776654
>PLN02947 oxidoreductase
Back Show alignment and domain information
Probab=100.00 E-value=1.9e-37 Score=241.15 Aligned_cols=109 Identities=40% Similarity=0.762 Sum_probs=105.0
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||++++.++|||++||++|+.|++|+|+++++++++|++
T Consensus 263 GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~ 342 (374)
T PLN02947 263 GLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRR 342 (374)
T ss_pred CeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCc
Confidence 89999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccceeec
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFIDFLKI 109 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 109 (114)
|++++++||++.+.+....++..++.+|+
T Consensus 343 Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~ 371 (374)
T PLN02947 343 YMDTDFATFLAYLASAEGKHKNFLESRKL 371 (374)
T ss_pred CCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence 99999999999999998888888888876
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=100.00 E-value=7.4e-37 Score=236.94 Aligned_cols=109 Identities=48% Similarity=0.920 Sum_probs=103.7
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.+..++|||++||++|+.|++|+|+++++++++|++
T Consensus 251 GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~ 330 (361)
T PLN02758 251 GLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCK 330 (361)
T ss_pred CeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCc
Confidence 89999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccceeec
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFIDFLKI 109 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 109 (114)
|++++++||+..+++....+...++.+|+
T Consensus 331 Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~ 359 (361)
T PLN02758 331 YRRYNHGEYSRHYVTSKLQGKKTLEFAKI 359 (361)
T ss_pred CCCccHHHHHHHHHhcccCchhhhhhhcc
Confidence 99999999999999998877777777765
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=100.00 E-value=2e-36 Score=225.98 Aligned_cols=106 Identities=41% Similarity=0.659 Sum_probs=99.2
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++||||||+||+||||+|+|+.|||+.+..++|||++||++|+.|++|+|+++++++++|++
T Consensus 154 GLqV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~ 233 (262)
T PLN03001 154 GLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPR 233 (262)
T ss_pred ceEEeeCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCc
Confidence 89999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccce
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFIDF 106 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~~ 106 (114)
|++++++||+..+++....+...++.
T Consensus 234 y~~~~~~e~l~~~~~~~~~~~~~~~~ 259 (262)
T PLN03001 234 YCEIVYGEYVSSWYSKGPEGKRNIDA 259 (262)
T ss_pred CCCccHHHHHHHHHHhccCCcchhhh
Confidence 99999999999988877666555543
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Back Show alignment and domain information
Probab=100.00 E-value=1.5e-36 Score=235.07 Aligned_cols=110 Identities=38% Similarity=0.614 Sum_probs=104.1
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeE-EecCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGE-LGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~-i~pl~~~~~~~~p~ 79 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.++..+|||++||++|+.|++ +.|++++++.++|+
T Consensus 249 GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~ 328 (360)
T PLN03178 249 GLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPP 328 (360)
T ss_pred ceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCcc
Confidence 89999999999999999999999999999999999999999999888889999999999999975 59999999998999
Q ss_pred CCCceeHHHHHHHHHhcccCCccccceeecc
Q 040795 80 LFKKINVVDYFKRFFSTELRGKSFIDFLKIQ 110 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 110 (114)
+|++++++||+..++...+.++..++.++|.
T Consensus 329 ~y~p~~~~eyl~~~~~~~~~~~~~~~~~~~~ 359 (360)
T PLN03178 329 KFPPRTFGQHVSHKLFKKPQDERNIDAADIS 359 (360)
T ss_pred cCCCccHHHHHHHHHhcccCcchhHhHHhcc
Confidence 9999999999999999988888889888875
>PLN02276 gibberellin 20-oxidase
Back Show alignment and domain information
Probab=100.00 E-value=1.6e-36 Score=235.00 Aligned_cols=110 Identities=35% Similarity=0.504 Sum_probs=104.2
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|+|++|||+++..++|||++||++|+.|++|+|+++++++++|++
T Consensus 244 GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~ 323 (361)
T PLN02276 244 GLQVFVDNKWRSVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRK 323 (361)
T ss_pred ceEEEECCEEEEcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCc
Confidence 89999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccceeecc
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFIDFLKIQ 110 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 110 (114)
|++++++||++.+.+....+...++.+++.
T Consensus 324 y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~ 353 (361)
T PLN02276 324 YPDFTWSDLLEFTQKHYRADMNTLQAFSNW 353 (361)
T ss_pred CCCCCHHHHHHHHHHhcccchhHHHHHHHH
Confidence 999999999999998888777778777753
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=100.00 E-value=1.8e-36 Score=233.89 Aligned_cols=110 Identities=44% Similarity=0.862 Sum_probs=103.1
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCC--CC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPK--TP 78 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~--~p 78 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|+|+.|||++++.++|||++||++|+.|++|+|++++++++ +|
T Consensus 235 GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p 314 (348)
T PLN02912 235 GLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSL 314 (348)
T ss_pred ceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCC
Confidence 8999999999999999999999999999999999999999999988888999999999999999999999999875 48
Q ss_pred CCCCceeHHHHHHHHHhcccCCccccceeecc
Q 040795 79 ALFKKINVVDYFKRFFSTELRGKSFIDFLKIQ 110 (114)
Q Consensus 79 ~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 110 (114)
++|++++|+||+..++++.+.+...++.+|..
T Consensus 315 ~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~ 346 (348)
T PLN02912 315 AIYRNFTYAEYFEKFWDTAFATESCIDSFKAS 346 (348)
T ss_pred CCCCCCcHHHHHHHHHhcccCCcchhhhhhcc
Confidence 99999999999999999888888888877753
>PLN02254 gibberellin 3-beta-dioxygenase
Back Show alignment and domain information
Probab=100.00 E-value=2.7e-36 Score=233.64 Aligned_cols=109 Identities=35% Similarity=0.714 Sum_probs=100.8
Q ss_pred CceEEECC-eEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIKKDG-KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~~~g-~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||+++| +|++|+|.+|++|||+||+||+||||+|||+.|||+++..++|||++||++|+.|++|+|+++++++++|+
T Consensus 248 GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~ 327 (358)
T PLN02254 248 GLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPP 327 (358)
T ss_pred CceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCc
Confidence 89999655 89999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCCceeHHHHHHHHHhcccCCccccceeeccCC
Q 040795 80 LFKKINVVDYFKRFFSTELRGKSFIDFLKIQDQ 112 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 112 (114)
+|++++++||+..+++.... .++.++++.+
T Consensus 328 ~Y~~~t~~ey~~~~~~~~~~---~~~~~~~~~~ 357 (358)
T PLN02254 328 LYRSVTWKEYLATKAKHFNK---ALSLIRNCNP 357 (358)
T ss_pred ccCCcCHHHHHHHHHHhhhh---hhhhhhccCC
Confidence 99999999999998877655 5677777654
>PLN02393 leucoanthocyanidin dioxygenase like protein
Back Show alignment and domain information
Probab=100.00 E-value=3.3e-36 Score=233.36 Aligned_cols=110 Identities=46% Similarity=0.818 Sum_probs=103.7
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+..++|||++||++|+.|++|+|+++++++++|++
T Consensus 252 GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~ 331 (362)
T PLN02393 252 GLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPAL 331 (362)
T ss_pred cceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCC
Confidence 89999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccceeecc
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFIDFLKIQ 110 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 110 (114)
|++++++||+..+.++...+...++.+|+.
T Consensus 332 y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~ 361 (362)
T PLN02393 332 YPPMTFDEYRLFIRTKGPRGKSQVESLKSP 361 (362)
T ss_pred CCCccHHHHHHHHHhcccCcchHHhhhccC
Confidence 999999999999988887777777777653
>PLN02365 2-oxoglutarate-dependent dioxygenase
Back Show alignment and domain information
Probab=100.00 E-value=9.7e-36 Score=225.77 Aligned_cols=108 Identities=29% Similarity=0.569 Sum_probs=99.5
Q ss_pred CceEEE--CCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCC
Q 040795 1 GLQIKK--DGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTP 78 (114)
Q Consensus 1 GLqv~~--~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p 78 (114)
||||++ +|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++..+|||++||+.|+.|++|+|+++++++++|
T Consensus 188 GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p 267 (300)
T PLN02365 188 GLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHP 267 (300)
T ss_pred ceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCC
Confidence 899985 689999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred CCCCceeHHHHHHHHHhcccCCccccceee
Q 040795 79 ALFKKINVVDYFKRFFSTELRGKSFIDFLK 108 (114)
Q Consensus 79 ~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 108 (114)
++|++++++||+..+......+...++.+.
T Consensus 268 ~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 297 (300)
T PLN02365 268 RLYKPFTYEDYRKLRLSTKLHAGEALALIT 297 (300)
T ss_pred ccCCCccHHHHHHHHHhccccccchHhhhh
Confidence 999999999999999988776665555443
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Back Show alignment and domain information
Probab=100.00 E-value=7.5e-36 Score=228.28 Aligned_cols=110 Identities=38% Similarity=0.711 Sum_probs=101.7
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCC--CC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPK--TP 78 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~--~p 78 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.+...+|||++||++|+.|++|+|++++++++ +|
T Consensus 197 GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p 276 (321)
T PLN02299 197 GLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEE 276 (321)
T ss_pred CcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCC
Confidence 8999999999999999999999999999999999999999999998888999999999999999999999999865 58
Q ss_pred CCCCceeHHHHHHHHHhcccCCc-cccceeecc
Q 040795 79 ALFKKINVVDYFKRFFSTELRGK-SFIDFLKIQ 110 (114)
Q Consensus 79 ~~y~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~ 110 (114)
++|++++++||++.++++...+. ..++.+++.
T Consensus 277 ~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~ 309 (321)
T PLN02299 277 QVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAM 309 (321)
T ss_pred cCCCCCcHHHHHHHHHHcccCCccchhhhhhcc
Confidence 99999999999999998877664 567777764
>PLN02704 flavonol synthase
Back Show alignment and domain information
Probab=100.00 E-value=2e-35 Score=226.93 Aligned_cols=95 Identities=41% Similarity=0.756 Sum_probs=92.4
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+++...+|||++||++|+.|++|+|+++++++++|++
T Consensus 237 GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~ 316 (335)
T PLN02704 237 GLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPK 316 (335)
T ss_pred ceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCcc
Confidence 89999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHh
Q 040795 81 FKKINVVDYFKRFFS 95 (114)
Q Consensus 81 y~~~~~~e~~~~~~~ 95 (114)
|++++++||+..+++
T Consensus 317 Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 317 FKTKKFKDYVYCKLN 331 (335)
T ss_pred CCCCCHHHHHHHHHh
Confidence 999999999998876
>PLN02997 flavonol synthase
Back Show alignment and domain information
Probab=100.00 E-value=3.2e-35 Score=225.12 Aligned_cols=96 Identities=33% Similarity=0.597 Sum_probs=92.7
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.+...+|||++||++|+.|++|+|+++++++++|++
T Consensus 221 GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~ 300 (325)
T PLN02997 221 GLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPK 300 (325)
T ss_pred CEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccccceeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCc
Confidence 89999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhc
Q 040795 81 FKKINVVDYFKRFFST 96 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~ 96 (114)
|++++++||+..+++.
T Consensus 301 y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 301 FETLIYNDYIDQKIRG 316 (325)
T ss_pred CCCccHHHHHHHHHhh
Confidence 9999999999988764
>PLN02156 gibberellin 2-beta-dioxygenase
Back Show alignment and domain information
Probab=100.00 E-value=4.9e-35 Score=224.93 Aligned_cols=99 Identities=34% Similarity=0.660 Sum_probs=95.0
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||+ ++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.+..++|||++||++|+.|++|+|+++++++++|+
T Consensus 218 GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~ 297 (335)
T PLN02156 218 GLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDC 297 (335)
T ss_pred ceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCc
Confidence 89998 78999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred CCCceeHHHHHHHHHhcccC
Q 040795 80 LFKKINVVDYFKRFFSTELR 99 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~ 99 (114)
+|++++++||+..++.+.+.
T Consensus 298 ~y~p~~~~ey~~~~~~~~~~ 317 (335)
T PLN02156 298 LYNEFTWSQYKLSAYKTKLG 317 (335)
T ss_pred cCCCccHHHHHHHHHhccCC
Confidence 99999999999999888654
>PLN02485 oxidoreductase
Back Show alignment and domain information
Probab=100.00 E-value=1.6e-34 Score=221.29 Aligned_cols=98 Identities=33% Similarity=0.566 Sum_probs=92.7
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCC--CCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLIT--PKT 77 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~--~~~ 77 (114)
||||+ ++|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+...+|||++||++|+.|++|+|++++++ .++
T Consensus 227 GLqV~~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~ 306 (329)
T PLN02485 227 ALQVRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGG 306 (329)
T ss_pred eeeEEcCCCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCC
Confidence 89999 689999999999999999999999999999999999999888889999999999999999999999987 678
Q ss_pred CCCCCceeHHHHHHHHHhccc
Q 040795 78 PALFKKINVVDYFKRFFSTEL 98 (114)
Q Consensus 78 p~~y~~~~~~e~~~~~~~~~~ 98 (114)
|++|++++++||+..++.+.+
T Consensus 307 ~~~y~~~t~~e~~~~~~~~~~ 327 (329)
T PLN02485 307 SQVFKRVVYGEHLVNKVLTNF 327 (329)
T ss_pred CCCCCcEeHHHHHHHHHHHhh
Confidence 899999999999999887654
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=100.00 E-value=2.3e-34 Score=221.77 Aligned_cols=99 Identities=40% Similarity=0.756 Sum_probs=93.7
Q ss_pred CceEE--ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCC
Q 040795 1 GLQIK--KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTP 78 (114)
Q Consensus 1 GLqv~--~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p 78 (114)
||||+ .+|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+...+|||++||++|+.|++|+|+++++++++|
T Consensus 231 GLQV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p 310 (345)
T PLN02750 231 GLQISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNP 310 (345)
T ss_pred ceEEeecCCCeEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCC
Confidence 89997 4899999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred CCCCceeHHHHHHHHHhcccC
Q 040795 79 ALFKKINVVDYFKRFFSTELR 99 (114)
Q Consensus 79 ~~y~~~~~~e~~~~~~~~~~~ 99 (114)
++|++++++||+..++...+.
T Consensus 311 ~~y~p~~~~e~~~~~~~~~~~ 331 (345)
T PLN02750 311 PKYKEFNWGKFFASRNRSDYK 331 (345)
T ss_pred CccCCccHHHHHHHHHhcccc
Confidence 999999999999988877543
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Back Show alignment and domain information
Probab=100.00 E-value=3.5e-34 Score=219.21 Aligned_cols=104 Identities=49% Similarity=0.895 Sum_probs=97.6
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||. ++|+|++|+|.|+++|||+||+||+||||+|||+.|||+++..++|||+|+|+.|..|++|.|++++++++ |+
T Consensus 215 GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~ 293 (322)
T KOG0143|consen 215 GLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRYKSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEE-PP 293 (322)
T ss_pred ceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcccceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCC-CC
Confidence 89999 59999999999999999999999999999999999999999988899999999999999999999999887 88
Q ss_pred CCCceeHHHHHHHHHhcccCCccccc
Q 040795 80 LFKKINVVDYFKRFFSTELRGKSFID 105 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~~~~~~~ 105 (114)
+|+++++.+|++.+++....+...++
T Consensus 294 ~Y~~~~~~~y~~~~~~~~~~~~~~~~ 319 (322)
T KOG0143|consen 294 KYKPFTFGDYLEFYFSKKLQGKTLLD 319 (322)
T ss_pred ccCcEEHHHHHHHHHhccccCcchhh
Confidence 89999999999999999887754443
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Back Show alignment and domain information
Probab=100.00 E-value=3.5e-34 Score=221.82 Aligned_cols=98 Identities=39% Similarity=0.677 Sum_probs=90.3
Q ss_pred CceEEEC-C-eEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCC
Q 040795 1 GLQIKKD-G-KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTP 78 (114)
Q Consensus 1 GLqv~~~-g-~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p 78 (114)
||||+++ | +|++|+|.+|++|||+||+||+||||+|+|++|||+.++..+|||++||++|+.|++|+|++ ++.+++|
T Consensus 233 GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p 311 (358)
T PLN02515 233 GLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKP 311 (358)
T ss_pred ceEEEECCCCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCC
Confidence 8999954 3 79999999999999999999999999999999999998888999999999999999999997 5666789
Q ss_pred CCCCceeHHHHHHHHHhcccC
Q 040795 79 ALFKKINVVDYFKRFFSTELR 99 (114)
Q Consensus 79 ~~y~~~~~~e~~~~~~~~~~~ 99 (114)
++|++++++||+..++...+.
T Consensus 312 ~~y~~~t~~eyl~~~~~~~~~ 332 (358)
T PLN02515 312 ILEEPITFAEMYRRKMSRDLE 332 (358)
T ss_pred CcCCCcCHHHHHHHHHhcccc
Confidence 999999999999999877654
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=100.00 E-value=3.8e-34 Score=220.91 Aligned_cols=103 Identities=41% Similarity=0.740 Sum_probs=91.4
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPAL 80 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~~ 80 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+...+|||++||++|+.|++|+|+++++++++|++
T Consensus 242 GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~ 321 (348)
T PLN00417 242 GLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRL 321 (348)
T ss_pred ceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCC
Confidence 89999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCceeHHHHHHHHHhcccCCccccc
Q 040795 81 FKKINVVDYFKRFFSTELRGKSFID 105 (114)
Q Consensus 81 y~~~~~~e~~~~~~~~~~~~~~~~~ 105 (114)
|++++ +|+...++....+...++
T Consensus 322 Y~~~~--~~~~~~~~~~~~~~~~~~ 344 (348)
T PLN00417 322 YKTVK--KYVELFFKYYQQGRRPIE 344 (348)
T ss_pred CCCHH--HHHHHHHHHHhcCcchhh
Confidence 99999 444444444444444444
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=100.00 E-value=6.9e-34 Score=218.23 Aligned_cols=99 Identities=32% Similarity=0.511 Sum_probs=92.2
Q ss_pred CceEEE-----CCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCC
Q 040795 1 GLQIKK-----DGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITP 75 (114)
Q Consensus 1 GLqv~~-----~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~ 75 (114)
||||++ +|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.+. .+|||++||++|+.|++|+|+++++++
T Consensus 221 GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~ 299 (332)
T PLN03002 221 GLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSE 299 (332)
T ss_pred ceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCC
Confidence 899985 36899999999999999999999999999999999999764 689999999999999999999999999
Q ss_pred CCCCCCCceeHHHHHHHHHhcccCC
Q 040795 76 KTPALFKKINVVDYFKRFFSTELRG 100 (114)
Q Consensus 76 ~~p~~y~~~~~~e~~~~~~~~~~~~ 100 (114)
++|++|++++++||+..++...+.+
T Consensus 300 ~~p~~y~~~~~~e~l~~~~~~~~~~ 324 (332)
T PLN03002 300 SDLPKYPPIKCSTYLTQRYEETHAK 324 (332)
T ss_pred CCcccCCCccHHHHHHHHHHHHhhh
Confidence 9999999999999999998876543
>PTZ00273 oxidase reductase; Provisional
Back Show alignment and domain information
Probab=100.00 E-value=7.1e-34 Score=216.92 Aligned_cols=98 Identities=33% Similarity=0.608 Sum_probs=92.2
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||+ ++|+|++|+|.+|++|||+||+||+||||+|+|++|||+.+ ..+|||++||++|+.|++|+|+++++++++|+
T Consensus 216 GLqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~ 294 (320)
T PTZ00273 216 GLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPP 294 (320)
T ss_pred ceEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcc
Confidence 89999 68999999999999999999999999999999999999854 57899999999999999999999999999999
Q ss_pred CCCceeHHHHHHHHHhcccC
Q 040795 80 LFKKINVVDYFKRFFSTELR 99 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~ 99 (114)
+|++++++||+..++.+.+.
T Consensus 295 ~y~~~~~~e~~~~~~~~~~~ 314 (320)
T PTZ00273 295 KYPPVRAVDWLLKRFAETYA 314 (320)
T ss_pred cCCceeHHHHHHHHHHHHHH
Confidence 99999999999998877543
>PLN02403 aminocyclopropanecarboxylate oxidase
Back Show alignment and domain information
Probab=99.98 E-value=2.4e-32 Score=207.63 Aligned_cols=105 Identities=38% Similarity=0.662 Sum_probs=92.9
Q ss_pred CceEEECCeEEEecCCC-CeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLP-DAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~-~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||+++|+|++|+|.+ +++|||+||+||+||||+|+|+.|||+.+..++|||++||++|+.|++|+|+++++
T Consensus 192 GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~------ 265 (303)
T PLN02403 192 GLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKNGSRLSIATFYNPAGDAIISPAPKLL------ 265 (303)
T ss_pred ceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecCCCCCEEEEEEEEcCCCCCeEeCchhhC------
Confidence 89999999999999999 69999999999999999999999999998888999999999999999999999885
Q ss_pred CCC-ceeHHHHHHHHHhcc-cCCccccceeeccCC
Q 040795 80 LFK-KINVVDYFKRFFSTE-LRGKSFIDFLKIQDQ 112 (114)
Q Consensus 80 ~y~-~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~ 112 (114)
|+ +++++||++.+.+.. ..++..++.+++-+.
T Consensus 266 -~~~~~~~~eyl~~~~~~~~~~~~~~~~~~~~~~~ 299 (303)
T PLN02403 266 -YPSNYRFQDYLKLYSTTKFGDKGPRFESMKKMAN 299 (303)
T ss_pred -CCCCccHHHHHHHHHHhccccccchHHHhhhhhc
Confidence 33 499999999988743 334556888887543
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Back Show alignment and domain information
Probab=99.97 E-value=6.3e-32 Score=208.13 Aligned_cols=100 Identities=30% Similarity=0.507 Sum_probs=89.0
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceee-eCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRAT-VNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv-~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+ .+..++|||++||++|+.|++|+| +
T Consensus 238 GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~p----------~ 307 (341)
T PLN02984 238 GLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIKS----------S 307 (341)
T ss_pred CeeEeeCCceEECCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEcc----------C
Confidence 89999999999999999999999999999999999999999996 455688999999999999999964 6
Q ss_pred CCCceeHHHHHHHHHhcccCCccc--cceeecc
Q 040795 80 LFKKINVVDYFKRFFSTELRGKSF--IDFLKIQ 110 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~ 110 (114)
+|++++++||+..+.......... ++.+|+.
T Consensus 308 ~y~p~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 340 (341)
T PLN02984 308 KYKPFTYSDFEAQVQLDVKTLGSKVGLSRFKSN 340 (341)
T ss_pred CcCcccHHHHHHHHHhhhhccCCcccccceecC
Confidence 899999999999988666544333 7888774
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Back Show alignment and domain information
Probab=99.95 E-value=1.5e-28 Score=185.32 Aligned_cols=84 Identities=35% Similarity=0.589 Sum_probs=75.3
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCC-CCCCCCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPS-LITPKTP 78 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~-~~~~~~p 78 (114)
||||+ ..|+|++|+|.||++|||+||+||+||||+|+||.|||+.++..+||||+||++|+.|+.|.|+.. +.+.+.+
T Consensus 212 GLqv~~~~g~Wl~v~P~pgtlvVNiGdmLe~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~ 291 (322)
T COG3491 212 GLEVRPPNGGWLDVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANE 291 (322)
T ss_pred CeEEecCCCCeeECCCCCCeEEEeHHHHHHHHhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCCcccccC
Confidence 89999 459999999999999999999999999999999999999998889999999999999999998764 4445566
Q ss_pred CCCCce
Q 040795 79 ALFKKI 84 (114)
Q Consensus 79 ~~y~~~ 84 (114)
+++..-
T Consensus 292 ~~~~~t 297 (322)
T COG3491 292 PRGPGT 297 (322)
T ss_pred CcCCCC
Confidence 666654
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit
Back Show alignment and domain information
Probab=99.77 E-value=1.3e-18 Score=111.59 Aligned_cols=60 Identities=50% Similarity=0.894 Sum_probs=45.8
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p 60 (114)
|||+..+++|+.|++.++.++||+||+|++||||.++|+.|||.......|+|++||++|
T Consensus 39 gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 39 GLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp -EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEEEE-
T ss_pred heeccccccccCccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEEECC
Confidence 799998889999999999999999999999999999999999999888999999999987
The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A
Back Show alignment and domain information
Probab=89.71 E-value=0.68 Score=29.38 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=23.1
Q ss_pred CeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCC-CceeEEEE
Q 040795 8 GKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSV-KERLSFAT 56 (114)
Q Consensus 8 g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~-~~R~S~~~ 56 (114)
..++.++|.+|.|+|.=+.+ .|+|....+ .+|+|++|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~l------------~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSWL------------WHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETTS------------EEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCCC------------EEeccCcCCCCCEEEEEc
Confidence 46788999999999988743 799977654 58999997
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A
Back Show alignment and domain information
Probab=86.02 E-value=1.1 Score=27.87 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=27.1
Q ss_pred CCCCeEEEEehhhHHHHhCCccccccceeeeC-CCCceeEEEEeeC
Q 040795 15 PLPDAFVVNIGDALEIFTNGTYRSIEHRATVN-SVKERLSFATFYN 59 (114)
Q Consensus 15 p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~-~~~~R~S~~~F~~ 59 (114)
|.+|.+++.-+ ..++|+|... ....|+++..|++
T Consensus 66 p~~g~~v~F~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 66 PKPGRLVIFPS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp -BTTEEEEEES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred CCCCEEEEEeC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 88898888765 4579999887 6789999999874
>TIGR02466 conserved hypothetical protein
Back Show alignment and domain information
Probab=85.09 E-value=1.5 Score=31.83 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=29.8
Q ss_pred eEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCC-CceeEEEEee
Q 040795 9 KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSV-KERLSFATFY 58 (114)
Q Consensus 9 ~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~-~~R~S~~~F~ 58 (114)
.|+.+.|.+|.+++.=+. -.|+|..+.+ .+|+|++|-+
T Consensus 160 ~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 160 RFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred ccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 477888999988887663 3688887754 6999999865
This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []
Back Show alignment and domain information
Probab=83.15 E-value=2.2 Score=30.01 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=25.8
Q ss_pred EEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCC-----CCceeEEEEeeC
Q 040795 10 WVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNS-----VKERLSFATFYN 59 (114)
Q Consensus 10 w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~-----~~~R~S~~~F~~ 59 (114)
=+.+.+.+|++++..|-.+ .|-|..-. +..|+|++||++
T Consensus 127 g~~~~~~~GtVl~~~~~~~-----------~Hgvtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 127 GVAFAYQPGTVLIFCAKRE-----------LHGVTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred CEEEecCCCcEEEEcccce-----------eeecCcccCCCCCCCeEEEEEEEeE
Confidence 3566777888887777432 45553222 268999999985
Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
E-value
Query
114
d1gp6a_ 349
b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr
8e-30
d1w9ya1 307
b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla
6e-27
d1dcsa_ 311
b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S
2e-18
d1odma_ 329
b.82.2.1 (A:) Isopenicillin N synthase {Emericella
3e-18
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349
Back Hide information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 107 bits (267), Expect = 8e-30
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 2 LQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPK 61
LQ+ +GKWV K +PD+ V++IGD LEI +NG Y+SI HR VN K R+S+A F P
Sbjct: 248 LQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 307
Query: 62 LDGE-LGPAPSLITPKTPALFKKINVVDYFK-RFFSTEL 98
D L P P +++ ++PA F + + + F E
Sbjct: 308 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQ 346
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307
Back Show information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]
Score = 98.8 bits (245), Expect = 6e-27
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNP 60
GLQ+ KDG+W+ V P+ + VVN+GD LE+ TNG Y+S+ HR R+S A+FYNP
Sbjct: 193 GLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNP 252
Query: 61 KLDGELGPAPSLI---TPKTPALFKKINVVDYFKRFFSTELRGKS-FIDFLK 108
D + PAP+L+ + ++ K DY K + + + K + +K
Sbjct: 253 GSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMK 304
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311
Back Show information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]
Score = 76.2 bits (186), Expect = 2e-18
Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 11/102 (10%)
Query: 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVN-----SVKERLSFA 55
LQ + G + + PDA +V G + T G ++ H + R S
Sbjct: 203 SLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSV 262
Query: 56 TFYNPKLDGELGP------APSLITPKTPALFKKINVVDYFK 91
F P D + A F+ +Y
Sbjct: 263 FFLRPNADFTFSVPLARECGFDVSLDGETATFQDWIGGNYVN 304
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329
Back Show information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Isopenicillin N synthase
species: Emericella nidulans [TaxId: 162425]
Score = 75.5 bits (184), Expect = 3e-18
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 3 QIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKL 62
Q++ + ++ +++N G + TN Y++ HR ER S F N
Sbjct: 230 QVETAAGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRV-KWVNAERQSLPFFVNLGY 288
Query: 63 DGELGPAPSLITPKTPALFKKINVVDYFKRFFSTELRGKS 102
D + P P + + ++ DY + L K+
Sbjct: 289 DSVIDPFDPR-EPNGKSDREPLSYGDYLQNGL-VSLINKN 326