Citrus Sinensis ID: 040836
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 758 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJN4 | 781 | Probable beta-D-xylosidas | yes | no | 0.936 | 0.909 | 0.536 | 0.0 | |
| Q94KD8 | 768 | Probable beta-D-xylosidas | no | no | 0.935 | 0.923 | 0.503 | 0.0 | |
| A5JTQ2 | 774 | Beta-xylosidase/alpha-L-a | N/A | no | 0.936 | 0.917 | 0.512 | 0.0 | |
| A5JTQ3 | 774 | Beta-xylosidase/alpha-L-a | N/A | no | 0.932 | 0.913 | 0.506 | 0.0 | |
| Q9FLG1 | 784 | Beta-D-xylosidase 4 OS=Ar | no | no | 0.943 | 0.911 | 0.506 | 0.0 | |
| Q9FGY1 | 774 | Beta-D-xylosidase 1 OS=Ar | no | no | 0.934 | 0.914 | 0.496 | 0.0 | |
| Q9LXD6 | 773 | Beta-D-xylosidase 3 OS=Ar | no | no | 0.941 | 0.923 | 0.490 | 0.0 | |
| Q9LXA8 | 792 | Probable beta-D-xylosidas | no | no | 0.956 | 0.915 | 0.449 | 0.0 | |
| Q9SGZ5 | 767 | Probable beta-D-xylosidas | no | no | 0.951 | 0.940 | 0.455 | 0.0 | |
| Q0CB82 | 765 | Probable exo-1,4-beta-xyl | N/A | no | 0.852 | 0.844 | 0.406 | 1e-135 |
| >sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/747 (53%), Positives = 508/747 (68%), Gaps = 37/747 (4%)
Query: 10 SDFPYCDAKLPYPERAKDLVERMTLPEKVQQMGDLAYGVPRLGLPLYEWWSEALHGVSFI 69
+ + +C+ L Y RAKDLV R++L EKVQQ+ + A GVPRLG+P YEWWSEALHGVS +
Sbjct: 37 AKYGFCNVSLSYEARAKDLVSRLSLKEKVQQLVNKATGVPRLGVPPYEWWSEALHGVSDV 96
Query: 70 GRRTNSPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGLT 129
G PG HF+ VPGATSFP ILT ASFN SLW K+G+ VSTEARAM+N+G AGLT
Sbjct: 97 G------PGVHFNGTVPGATSFPATILTAASFNTSLWLKMGEVVSTEARAMHNVGLAGLT 150
Query: 130 FWSPNINVVRDPRWGRVLETPGEDPYVVGRYAINYVRGLQDVEGVEYHRDSDSRPLKISA 189
+WSPN+NV RDPRWGR ETPGEDP VV +YA+NYV+GLQDV H SR LK+S+
Sbjct: 151 YWSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVKGLQDV-----HDAGKSRRLKVSS 205
Query: 190 CCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSYNRVNGI 249
CCKHY AYDLDNW+G DRFHFD++VT+QD+++T+ PF+ CV EGDVSSVMCSYNRVNGI
Sbjct: 206 CCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEGDVSSVMCSYNRVNGI 265
Query: 250 PTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKAGLDLDC 309
PTCADP LL IRG W GYIVSDCDSIQ + T+EDAVA LKAGL+++C
Sbjct: 266 PTCADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFNDIHY-TKTREDAVALALKAGLNMNC 324
Query: 310 GDYYTNFTMGAVQQGKIAEADIDTSLRFLYIVLMRLGYFDGSPQ---YKNLGKNNICNPQ 366
GD+ +T AV+ K+ +D+D +L + YIVLMRLG+FDG P+ + NLG +++C+
Sbjct: 325 GDFLGKYTENAVKLKKLNGSDVDEALIYNYIVLMRLGFFDGDPKSLPFGNLGPSDVCSKD 384
Query: 367 HIELAAEAARQGIVLLKNDNGALPLNTGNIKTLALVGPHANATKAMIGNYEGTPCRYTSP 426
H LA EAA+QGIVLL+N G LPL +K LA++GP+ANATK MI NY G PC+YTSP
Sbjct: 385 HQMLALEAAKQGIVLLEN-RGDLPLPKTTVKKLAVIGPNANATKVMISNYAGVPCKYTSP 443
Query: 427 MDGFYAY-SKVINYAPGCADIVCQNNSMIPAAIDAAKNADATVIVAGLDLSVEAEGKDRV 485
+ G Y + I Y PGC D+ C + ++I AA+ A AD TV+V GLD +VEAEG DRV
Sbjct: 444 IQGLQKYVPEKIVYEPGCKDVKCGDQTLISAAVKAVSEADVTVLVVGLDQTVEAEGLDRV 503
Query: 486 DLLLPGFQTELINKVADAAKGPVTLVIMSAGAVDINFAKNNPKIKSILWVGYPGEEGGRA 545
+L LPG+Q +L+ VA+AAK V LVIMSAG +DI+FAKN I+++LWVGYPGE GG A
Sbjct: 504 NLTLPGYQEKLVRDVANAAKKTVVLVIMSAGPIDISFAKNLSTIRAVLWVGYPGEAGGDA 563
Query: 546 IADVIFGKYNPGGRLPITWYEANYV-KIPYTSMPLRP--VNNFPGRTYKFFDGPVVYPFG 602
IA VIFG YNP GRLP TWY + K+ T M +RP + FPGR+Y+F+ G +Y FG
Sbjct: 564 IAQVIFGDYNPSGRLPETWYPQEFADKVAMTDMNMRPNSTSGFPGRSYRFYTGKPIYKFG 623
Query: 603 YGLSYTQFKYKVASSPKSVDIKLDKDQQCRDINYTVGTNKPPCAAVLIDDVKCKDYKFTF 662
YGLSY+ F V S+P + IK N + NK +V I V C D K
Sbjct: 624 YGLSYSSFSTFVLSAPSIIHIK---------TNPIMNLNK--TTSVDISTVNCHDLKIRI 672
Query: 663 QIEVENMGKMDGSEVVMVYSKPPGIA------GTHIKQVIGYERVFIAAGQSAKVGFTMN 716
I V+N G GS VV+V+ KPP + G + Q++G+ERV + + K +
Sbjct: 673 VIGVKNHGLRSGSHVVLVFWKPPKCSKSLVGGGVPLTQLVGFERVEVGRSMTEKFTVDFD 732
Query: 717 ACKSLKIVDNAANSLLASGAHTILVGE 743
CK+L +VD L +G H +++G
Sbjct: 733 VCKALSLVDTHGKRKLVTGHHKLVIGS 759
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: - |
| >sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q0CB82|BXLB_ASPTN Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=bxlB PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 758 | ||||||
| 255557375 | 802 | Beta-glucosidase, putative [Ricinus comm | 0.978 | 0.925 | 0.671 | 0.0 | |
| 449433577 | 812 | PREDICTED: probable beta-D-xylosidase 2- | 0.985 | 0.919 | 0.645 | 0.0 | |
| 225432136 | 809 | PREDICTED: probable beta-D-xylosidase 5- | 0.982 | 0.920 | 0.636 | 0.0 | |
| 225432134 | 805 | PREDICTED: probable beta-D-xylosidase 5- | 0.986 | 0.929 | 0.618 | 0.0 | |
| 224093292 | 694 | predicted protein [Populus trichocarpa] | 0.907 | 0.991 | 0.645 | 0.0 | |
| 225432132 | 805 | PREDICTED: beta-xylosidase/alpha-L-arabi | 0.986 | 0.929 | 0.602 | 0.0 | |
| 297736787 | 774 | unnamed protein product [Vitis vinifera] | 0.945 | 0.926 | 0.599 | 0.0 | |
| 297736788 | 746 | unnamed protein product [Vitis vinifera] | 0.899 | 0.914 | 0.592 | 0.0 | |
| 297736786 | 745 | unnamed protein product [Vitis vinifera] | 0.907 | 0.923 | 0.569 | 0.0 | |
| 359477633 | 781 | PREDICTED: LOW QUALITY PROTEIN: beta-D-x | 0.982 | 0.953 | 0.584 | 0.0 |
| >gi|255557375|ref|XP_002519718.1| Beta-glucosidase, putative [Ricinus communis] gi|223541135|gb|EEF42691.1| Beta-glucosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/759 (67%), Positives = 610/759 (80%), Gaps = 17/759 (2%)
Query: 1 RFESIKVKLSDFPYCDAKLPYPERAKDLVERMTLPEKVQQMGDLAYGVPRLGLPLYEWWS 60
R++++ + ++ F +CD+ L Y RAKDLV +MTL EKVQQ+GDLAYGVPRLG+P YEWWS
Sbjct: 55 RYDNLGLDMTTFGFCDSSLSYEVRAKDLVNQMTLKEKVQQLGDLAYGVPRLGIPKYEWWS 114
Query: 61 EALHGVSFIGRRTNSPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAM 120
EALHGVS +G PGT FD VPGATSFPT ILTTASFNESLWK IGQ S +ARAM
Sbjct: 115 EALHGVSDVG------PGTFFDDLVPGATSFPTTILTTASFNESLWKNIGQA-SAKARAM 167
Query: 121 YNLGNAGLTFWSPNINVVRDPRWGRVLETPGEDPYVVGRYAINYVRGLQDVEGVEYHRDS 180
YNLG AGLT+WSPN+NVVRDPRWGR +ETPGEDPYVVGRYA+NYVRGLQDVEG E + D
Sbjct: 168 YNLGRAGLTYWSPNVNVVRDPRWGRTVETPGEDPYVVGRYAVNYVRGLQDVEGTENYTDL 227
Query: 181 DSRPLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVM 240
++RPLK+S+CCKHYAAYD++ W+G +R FD+RVTEQDM ETF+ PFEMCV EGDVSSVM
Sbjct: 228 NTRPLKVSSCCKHYAAYDVEKWQGVERLTFDARVTEQDMVETFLRPFEMCVKEGDVSSVM 287
Query: 241 CSYNRVNGIPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARV 300
CS+NRVNGIPTCADPKLLNQTIRGDW+ HGYIVSDCDSI+ +V++HKFL DT EDAVA+V
Sbjct: 288 CSFNRVNGIPTCADPKLLNQTIRGDWDLHGYIVSDCDSIEVMVDNHKFLGDTNEDAVAQV 347
Query: 301 LKAGLDLDCGDYYTNFTMGAVQQGKIAEADIDTSLRFLYIVLMRLGYFDGSPQYKNLGKN 360
LKAGLDLDCG YYTNFT +V+QGK E ID SL++LY+VLMRLG+FDG+PQY+ LGK
Sbjct: 348 LKAGLDLDCGGYYTNFTETSVKQGKAREEYIDRSLKYLYVVLMRLGFFDGTPQYQKLGKK 407
Query: 361 NICNPQHIELAAEAARQGIVLLKNDNGALPLNTGNIKTLALVGPHANATKAMIGNYEGTP 420
+IC +++ELA +AAR+GIVLLKN N LPL+ +K LA+VGPHANAT+ MIGNY G P
Sbjct: 408 DICTKENVELAKQAAREGIVLLKN-NDTLPLSMDKVKNLAVVGPHANATRVMIGNYAGVP 466
Query: 421 CRYTSPMDGFYAYSKVINYAPGCADIVCQNNSMIPAAIDAAKNADATVIVAGLDLSVEAE 480
CRY SP+DGF YS V Y GC D+ C+N S++ A+ AAKNADAT+IVAGLDL++EAE
Sbjct: 467 CRYVSPIDGFSIYSNV-TYEIGC-DVPCKNESLVFPAVHAAKNADATIIVAGLDLTIEAE 524
Query: 481 GKDRVDLLLPGFQTELINKVADAAKGPVTLVIMSAGAVDINFAKNNPKIKSILWVGYPGE 540
G DR DLLLPG+QT+LIN+VA AA GPV LVIM+AG VDI+FA++N KIK+ILWVGYPG+
Sbjct: 525 GLDRNDLLLPGYQTQLINQVAGAANGPVILVIMAAGGVDISFARDNEKIKAILWVGYPGQ 584
Query: 541 EGGRAIADVIFGKYNPGGRLPITWYEANYV-KIPYTSMPLRPVNN--FPGRTYKFFDGPV 597
EGG AIADV+FGKYNPGGRLPITWYEA++V ++P T M LRP +PG+TYKF+DG
Sbjct: 585 EGGHAIADVVFGKYNPGGRLPITWYEADFVEQVPMTYMQLRPDEELGYPGKTYKFYDGST 644
Query: 598 VYPFGYGLSYTQFKYKVASSPKSVDIKLDKDQQCRDINYTVGTNKPPCAAVLIDDVKCKD 657
VYPFGYGLSYT F Y + S+ +S I L+K Q CRD+ Y T KP C AVL D + C D
Sbjct: 645 VYPFGYGLSYTTFSYNITSAKRSKHIALNKFQHCRDLRYGNETFKPSCPAVLTDHLPCND 704
Query: 658 YKFTFQIEVENMGKMDGSEVVMVYSK-PPGIAGTHIKQVIGYERVFIAAGQSAKVGFTMN 716
F ++EVEN G DGSEVVMVYSK P GI G++IKQVIG++RVF+ AG KV F N
Sbjct: 705 -DFELEVEVENTGSRDGSEVVMVYSKTPEGIVGSYIKQVIGFKRVFVQAGSVEKVNFRFN 763
Query: 717 ACKSLKIVDNAANSLLASGAHTILVGEGVGGVSFPLQLN 755
CKS +I+D A S+L SG HTI+VG+ + VS PL +N
Sbjct: 764 VCKSFRIIDYNAYSILPSGGHTIMVGDDI--VSIPLYIN 800
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433577|ref|XP_004134574.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus] gi|449530107|ref|XP_004172038.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225432136|ref|XP_002274651.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225432134|ref|XP_002274619.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224093292|ref|XP_002309869.1| predicted protein [Populus trichocarpa] gi|222852772|gb|EEE90319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225432132|ref|XP_002274591.1| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297736787|emb|CBI25988.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297736788|emb|CBI25989.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297736786|emb|CBI25987.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359477633|ref|XP_003632006.1| PREDICTED: LOW QUALITY PROTEIN: beta-D-xylosidase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 758 | ||||||
| TAIR|locus:2091236 | 781 | AT3G19620 [Arabidopsis thalian | 0.931 | 0.903 | 0.531 | 1.4e-206 | |
| TAIR|locus:2196060 | 768 | BXL2 "beta-xylosidase 2" [Arab | 0.926 | 0.914 | 0.497 | 5.3e-198 | |
| TAIR|locus:2174809 | 784 | XYL4 "beta-D-xylosidase 4" [Ar | 0.943 | 0.911 | 0.501 | 5.5e-196 | |
| TAIR|locus:2157994 | 774 | BXL1 "beta-xylosidase 1" [Arab | 0.934 | 0.914 | 0.488 | 8.1e-195 | |
| TAIR|locus:2144756 | 773 | BXL3 "AT5G09730" [Arabidopsis | 0.940 | 0.922 | 0.484 | 1.2e-186 | |
| TAIR|locus:2142434 | 792 | AT5G10560 [Arabidopsis thalian | 0.952 | 0.911 | 0.448 | 1.1e-179 | |
| TAIR|locus:2029391 | 767 | AT1G78060 [Arabidopsis thalian | 0.949 | 0.938 | 0.450 | 1.6e-175 | |
| ASPGD|ASPL0000029139 | 763 | bxlB [Emericella nidulans (tax | 0.762 | 0.757 | 0.393 | 2e-117 | |
| UNIPROTKB|Q5ATH9 | 763 | bxlB "Exo-1,4-beta-xylosidase | 0.762 | 0.757 | 0.393 | 2e-117 | |
| ASPGD|ASPL0000048081 | 803 | xlnD [Emericella nidulans (tax | 0.931 | 0.879 | 0.349 | 9.5e-105 |
| TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1998 (708.4 bits), Expect = 1.4e-206, P = 1.4e-206
Identities = 396/745 (53%), Positives = 502/745 (67%)
Query: 12 FPYCDAKLPYPERAKDLVERMTLPEKVQQMGDLAYGVPRLGLPLYEWWSEALHGVSFIGR 71
+ +C+ L Y RAKDLV R++L EKVQQ+ + A GVPRLG+P YEWWSEALHGVS +G
Sbjct: 39 YGFCNVSLSYEARAKDLVSRLSLKEKVQQLVNKATGVPRLGVPPYEWWSEALHGVSDVG- 97
Query: 72 RTNSPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGLTFW 131
PG HF+ VPGATSFP ILT ASFN SLW K+G+ VSTEARAM+N+G AGLT+W
Sbjct: 98 -----PGVHFNGTVPGATSFPATILTAASFNTSLWLKMGEVVSTEARAMHNVGLAGLTYW 152
Query: 132 SPNINVVRDPRWGRVLETPGEDPYVVGRYAINYVRGLQDVEGVEYHRDSDSRPLKISACC 191
SPN+NV RDPRWGR ETPGEDP VV +YA+NYV+GLQDV H SR LK+S+CC
Sbjct: 153 SPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVKGLQDV-----HDAGKSRRLKVSSCC 207
Query: 192 KHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSYNRVNGIPT 251
KHY AYDLDNW+G DRFHFD++VT+QD+++T+ PF+ CV EGDVSSVMCSYNRVNGIPT
Sbjct: 208 KHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEGDVSSVMCSYNRVNGIPT 267
Query: 252 CADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKAGLDLDCGD 311
CADP LL IRG W GYIVSDCDSIQ + T+EDAVA LKAGL+++CGD
Sbjct: 268 CADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFNDIHYTK-TREDAVALALKAGLNMNCGD 326
Query: 312 YYTNFTMGAVQQGKIAEADIDTSLRFLYIVLMRLGYFDGSPQ---YKNLGKNNICNPQHI 368
+ +T AV+ K+ +D+D +L + YIVLMRLG+FDG P+ + NLG +++C+ H
Sbjct: 327 FLGKYTENAVKLKKLNGSDVDEALIYNYIVLMRLGFFDGDPKSLPFGNLGPSDVCSKDHQ 386
Query: 369 ELAAEAARQGIVLLKNDNGALPLNTGNIKTLALVGPHANATKAMIGNYEGTPCRYTSPMD 428
LA EAA+QGIVLL+N G LPL +K LA++GP+ANATK MI NY G PC+YTSP+
Sbjct: 387 MLALEAAKQGIVLLEN-RGDLPLPKTTVKKLAVIGPNANATKVMISNYAGVPCKYTSPIQ 445
Query: 429 GFYAY--SKVINYAPGCADIVCQNNSMIPXXXXXXXXXXXTVIVAGLDLSVEAEGKDRVD 486
G Y K++ Y PGC D+ C + ++I TV+V GLD +VEAEG DRV+
Sbjct: 446 GLQKYVPEKIV-YEPGCKDVKCGDQTLISAAVKAVSEADVTVLVVGLDQTVEAEGLDRVN 504
Query: 487 LLLPGFQTELINKVADAAKGPVTLVIMSAGAVDINFAKNNPKIKSILWVGYPGEEGGRAI 546
L LPG+Q +L+ VA+AAK V LVIMSAG +DI+FAKN I+++LWVGYPGE GG AI
Sbjct: 505 LTLPGYQEKLVRDVANAAKKTVVLVIMSAGPIDISFAKNLSTIRAVLWVGYPGEAGGDAI 564
Query: 547 ADVIFGKYNPGGRLPITWYEANYV-KIPYTSMPLRP--VNNFPGRTYKFFDGPVVYPFGY 603
A VIFG YNP GRLP TWY + K+ T M +RP + FPGR+Y+F+ G +Y FGY
Sbjct: 565 AQVIFGDYNPSGRLPETWYPQEFADKVAMTDMNMRPNSTSGFPGRSYRFYTGKPIYKFGY 624
Query: 604 GLSYTQFKYKVASSPKSVDIKLDKDQQCRDINYTVGTNKPPCAAVLIDDVKCKDYKFTFQ 663
GLSY+ F V S+P + IK N + NK +V I V C D K
Sbjct: 625 GLSYSSFSTFVLSAPSIIHIKT---------NPIMNLNKT--TSVDISTVNCHDLKIRIV 673
Query: 664 IEVENMGKMDGSEVVMVYSKPPGIA------GTHIKQVIGYERVFIAAGQSAKVGFTMNA 717
I V+N G GS VV+V+ KPP + G + Q++G+ERV + + K +
Sbjct: 674 IGVKNHGLRSGSHVVLVFWKPPKCSKSLVGGGVPLTQLVGFERVEVGRSMTEKFTVDFDV 733
Query: 718 CKSLKIVDNAANSLLASGAHTILVG 742
CK+L +VD L +G H +++G
Sbjct: 734 CKALSLVDTHGKRKLVTGHHKLVIG 758
|
|
| TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000048081 xlnD [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q4WFI6 | BXLB_ASPFU | 3, ., 2, ., 1, ., 3, 7 | 0.3965 | 0.8957 | 0.8806 | yes | no |
| A2QA27 | XYND_ASPNC | 3, ., 2, ., 1, ., 3, 7 | 0.3732 | 0.8641 | 0.8146 | yes | no |
| Q5ATH9 | BXLB_EMENI | 3, ., 2, ., 1, ., 3, 7 | 0.3664 | 0.9076 | 0.9017 | yes | no |
| O00089 | XYND_ASPNG | 3, ., 2, ., 1, ., 3, 7 | 0.3732 | 0.8641 | 0.8146 | yes | no |
| A5JTQ3 | XYL2_MEDSV | 3, ., 2, ., 1, ., 5, 5 | 0.5060 | 0.9327 | 0.9134 | N/A | no |
| A5JTQ2 | XYL1_MEDSV | 3, ., 2, ., 1, ., 5, 5 | 0.5121 | 0.9366 | 0.9173 | N/A | no |
| Q9LJN4 | BXL5_ARATH | 3, ., 2, ., 1, ., - | 0.5368 | 0.9366 | 0.9090 | yes | no |
| Q2TYT2 | BXLB_ASPOR | 3, ., 2, ., 1, ., 3, 7 | 0.3863 | 0.9155 | 0.8707 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.37 | 0.914 |
| 3rd Layer | 3.2.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 758 | |||
| PLN03080 | 779 | PLN03080, PLN03080, Probable beta-xylosidase; Prov | 0.0 | |
| PRK15098 | 765 | PRK15098, PRK15098, beta-D-glucoside glucohydrolas | 1e-77 | |
| pfam01915 | 221 | pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam | 2e-62 | |
| pfam00933 | 296 | pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil | 1e-61 | |
| COG1472 | 397 | COG1472, BglX, Beta-glucosidase-related glycosidas | 2e-57 | |
| pfam14310 | 71 | pfam14310, Fn3-like, Fibronectin type III-like dom | 4e-10 |
| >gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional | Back alignment and domain information |
|---|
Score = 830 bits (2146), Expect = 0.0
Identities = 365/752 (48%), Positives = 493/752 (65%), Gaps = 37/752 (4%)
Query: 10 SDFPYCDAKLPYPERAKDLVERMTLPEKVQQMGDLAYGVPRLGLPLYEWWSEALHGVSFI 69
S +P+C+A LP P RA+ LV +TL EK+ Q+ + A GVPRLG+P YEWWSE+LHG++
Sbjct: 38 SAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADN 97
Query: 70 GRRTNSPPGTHFDS-EVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGL 128
G PG F+S V ATSFP VIL+ ASFN SLW+ IG ++ EARAMYN G AGL
Sbjct: 98 G------PGVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGL 151
Query: 129 TFWSPNINVVRDPRWGRVLETPGEDPYVVGRYAINYVRGLQDVEGVEYHRDSDSRPLKIS 188
TFW+PNIN+ RDPRWGR ETPGEDP V Y++ +V+G Q + + D + L +S
Sbjct: 152 TFWAPNINIFRDPRWGRGQETPGEDPAVASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLS 211
Query: 189 ACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSYNRVNG 248
ACCKHY AYDL+ W R+ F++ VTEQDM++T+ PF+ C+ EG S +MCSYN+VNG
Sbjct: 212 ACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQVNG 271
Query: 249 IPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKAGLDLD 308
+P CA LL Q R +W F GYI SDCD++ TI E + + EDAVA VLKAG+D++
Sbjct: 272 VPACARKDLL-QKARDEWGFQGYITSDCDAVATIFEYQTYTK-SPEDAVADVLKAGMDIN 329
Query: 309 CGDYYTNFTMGAVQQGKIAEADIDTSLRFLYIVLMRLGYFDGSP---QYKNLGKNNICNP 365
CG Y T A+++GK+ E DID +L L+ V +RLG FDG P Y LG NN+C
Sbjct: 330 CGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTK 389
Query: 366 QHIELAAEAARQGIVLLKNDNGALPLNTGNIKTLALVGPHANATKAMIGNYEGTPCRYTS 425
+H ELA EAARQGIVLLKND LPLN + +LA++GP AN + G+Y G PC+ T+
Sbjct: 390 EHRELALEAARQGIVLLKNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTT 449
Query: 426 PMDGFYAYSKVINYAPGCADIVCQNNSMIPAAIDAAKNADATVIVAGLDLSVEAEGKDRV 485
G AY K ++A GC D+ C +++ AI AK AD V+VAGLDLS E E DRV
Sbjct: 450 LFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQETEDHDRV 509
Query: 486 DLLLPGFQTELINKVADAAKGPVTLVIMSAGAVDINFAKNNPKIKSILWVGYPGEEGGRA 545
LLLPG Q +LI+ VA +K PV LV+ G VD++FAK +P+I SILW+GYPGE GG+A
Sbjct: 510 SLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQA 569
Query: 546 IADVIFGKYNPGGRLPITWYEANYVKIPYTSMPLR--PVNNFPGRTYKFFDGPVVYPFGY 603
+A++IFG YNPGGRLP+TWY ++ +P T M +R P +PGRTY+F+ G VVY FGY
Sbjct: 570 LAEIIFGDYNPGGRLPMTWYPESFTAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGY 629
Query: 604 GLSYTQFKYKVASSPKSVDIK--LDKD--------QQCRDINYTVGTNKPPCAAVLIDDV 653
GLSYT+F YK+ S+PK + + +D Q+ +++Y V I+D+
Sbjct: 630 GLSYTKFSYKILSAPKKLSLSRSSVQDSISRKPLLQRRDELDY-----------VQIEDI 678
Query: 654 -KCKDYKFTFQIEVENMGKMDGSEVVMVYSK-PPGIAGTHIKQVIGYERVFIAAGQSAKV 711
C+ +F I V N+G+MDGS VVM++S+ PP + G KQ++G++RV A+G+S +
Sbjct: 679 ASCESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDRVHTASGRSTET 738
Query: 712 GFTMNACKSLKIVDNAANSLLASGAHTILVGE 743
++ CK L + + +L G H +++G+
Sbjct: 739 EIVVDPCKHLSVANEEGKRVLPLGDHVLMLGD 770
|
Length = 779 |
| >gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|222669 pfam14310, Fn3-like, Fibronectin type III-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 758 | |||
| PLN03080 | 779 | Probable beta-xylosidase; Provisional | 100.0 | |
| PRK15098 | 765 | beta-D-glucoside glucohydrolase; Provisional | 100.0 | |
| COG1472 | 397 | BglX Beta-glucosidase-related glycosidases [Carboh | 100.0 | |
| PF00933 | 299 | Glyco_hydro_3: Glycosyl hydrolase family 3 N termi | 100.0 | |
| PRK05337 | 337 | beta-hexosaminidase; Provisional | 100.0 | |
| PF01915 | 227 | Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter | 100.0 | |
| PF14310 | 71 | Fn3-like: Fibronectin type III-like domain; PDB: 3 | 99.82 | |
| PF07705 | 101 | CARDB: CARDB; InterPro: IPR011635 The APHP (acidic | 96.73 | |
| PF10633 | 78 | NPCBM_assoc: NPCBM-associated, NEW3 domain of alph | 95.85 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 94.1 | |
| COG0486 | 454 | ThdF Predicted GTPase [General function prediction | 91.79 | |
| PF14874 | 102 | PapD-like: Flagellar-associated PapD-like | 90.31 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 87.0 | |
| PRK13202 | 104 | ureB urease subunit beta; Reviewed | 86.53 | |
| PRK13203 | 102 | ureB urease subunit beta; Reviewed | 86.28 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 84.55 | |
| cd00407 | 101 | Urease_beta Urease beta-subunit; Urease is a nicke | 84.23 | |
| TIGR00192 | 101 | urease_beta urease, beta subunit. In a number of s | 83.5 |
| >PLN03080 Probable beta-xylosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-164 Score=1445.76 Aligned_cols=732 Identities=49% Similarity=0.929 Sum_probs=635.2
Q ss_pred cCCCCCcCCCCCChHHHHHHHHhcCCHHHHHHhhcCCCCCCCCCCcchhhhhhhcccccccccccCCCCCCcccC-CCCC
Q 040836 8 KLSDFPYCDAKLPYPERAKDLVERMTLPEKVQQMGDLAYGVPRLGLPLYEWWSEALHGVSFIGRRTNSPPGTHFD-SEVP 86 (758)
Q Consensus 8 ~~~~~~~~d~~~~~~~rv~~ll~~MTleEKi~ql~~~~~~i~~lgi~~~~~~~~~~~gv~~~~~~~~~~~g~~~~-~~~~ 86 (758)
+...+||||+++++++|+++||++||||||++||.+...+++|||||.+.||+|++||++..+ +|+++. +.+.
T Consensus 36 ~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~~hGv~~~~------~g~~~~~g~~~ 109 (779)
T PLN03080 36 TFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNG------PGVSFNSGPVS 109 (779)
T ss_pred cccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceecccccccccCC------CccccccCCCC
Confidence 356699999999999999999999999999999998888999999999999999999997544 677764 3355
Q ss_pred CcccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCccccccceecccCCCCCCccccCcCCChHHHHHHHHHHHh
Q 040836 87 GATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGLTFWSPNINVVRDPRWGRVLETPGEDPYVVGRYAINYVR 166 (758)
Q Consensus 87 ~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~~~~g~~G~~~laP~vdv~r~p~~gr~~esfgeDP~l~~~~a~a~v~ 166 (758)
++|.||++|++|||||++|++++|+++|+|+|+++|.|.+|+++|+|++||.|||||||++|||||||+|+++||.|||+
T Consensus 110 ~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~G~~~~aP~vdi~rdPrwGR~~EtfGEDP~lv~~~a~a~V~ 189 (779)
T PLN03080 110 AATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYSVEFVK 189 (779)
T ss_pred CceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhccccccCcceeecccccccCCCcCccccCcCCCHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999997665557778999999999999999999999999999999999999
Q ss_pred hhccCCCCcc-ccCCCCCCcceeeeecccccCccCCCCCCCcccccccCCHHHHHHhccHHHHHHHHcCCCceEEeeccc
Q 040836 167 GLQDVEGVEY-HRDSDSRPLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSYNR 245 (758)
Q Consensus 167 G~Q~~~g~~~-~~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~ 245 (758)
|+|+. +... ..+...++.+|+||+||||||+++.+.+..|...++.+++++|+|+||+||++||++|.+++||||||+
T Consensus 190 GlQ~~-~~~~~~~~~~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl~PF~~ai~~g~~~~VM~sYn~ 268 (779)
T PLN03080 190 GFQGG-KWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQ 268 (779)
T ss_pred HhcCC-CcccccccccCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhhHHHHHHHHhcCCeEEEeCCcC
Confidence 99985 1000 000001244599999999999998777778888899999999999999999999999988899999999
Q ss_pred cCCcccccCHHHHHHHHhhhcCCCcEEEcCchhhhhhhhhcccccCCHHHHHHHHHHcCCCcCCCcchHHHHHHHHHcCC
Q 040836 246 VNGIPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKAGLDLDCGDYYTNFTMGAVQQGK 325 (758)
Q Consensus 246 vng~pa~~s~~ll~~lLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~~~~~l~~av~~g~ 325 (758)
+||+|||.|++||++ ||+||||+|+|||||++|..+.. .|++..+.+|++++||+||+||+|..++.+.|.+||++|+
T Consensus 269 vnG~Pa~~s~~lL~~-LR~ewGF~G~VvSD~~a~~~~~~-~~~~~~~~~ea~~~Al~AG~Dl~~~~~~~~~l~~av~~G~ 346 (779)
T PLN03080 269 VNGVPACARKDLLQK-ARDEWGFQGYITSDCDAVATIFE-YQTYTKSPEDAVADVLKAGMDINCGSYMLRHTQSAIEKGK 346 (779)
T ss_pred cCCccccCCHHHHHH-HHHHhCcCCeEecchHHHHHhhh-cccccCCHHHHHHHHHHcCCCcccCchhHHHHHHHHHcCC
Confidence 999999999999986 99999999999999999999987 7778788999999999999999998877789999999999
Q ss_pred CcHHhHHhHHHHHHHHHHHhCCCCCCc---ccccCCCCCCCCHHHHHHHHHHHhhceEEecCCCCCCCCCCCCCceEEEE
Q 040836 326 IAEADIDTSLRFLYIVLMRLGYFDGSP---QYKNLGKNNICNPQHIELAAEAARQGIVLLKNDNGALPLNTGNIKTLALV 402 (758)
Q Consensus 326 i~~~~id~av~Ril~~k~~lGlfd~~~---~~~~~~~~~v~~~~~~~la~~~a~eSiVLLKN~~~~LPL~~~~~~kIavi 402 (758)
|++++||+||+|||++|+++|+|++++ +|.......+.+++|+++|+++|++|||||||++++|||++.+.+||+||
T Consensus 347 i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~siVLLKN~~~~LPL~~~~~~~IaVi 426 (779)
T PLN03080 347 VQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKKFLPLNKSEVSSLAII 426 (779)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhCEEEEecCCCCCCCCCCCCCEEEEE
Confidence 999999999999999999999999532 23334456678999999999999999999999999999987655799999
Q ss_pred ccCccccccccccccCCCCccCCHHHHHHhhccceeecCCCCcccccCCCChHHHHHHhhcCCEEEEEEcCCCCcccCCC
Q 040836 403 GPHANATKAMIGNYEGTPCRYTSPMDGFYAYSKVINYAPGCADIVCQNNSMIPAAIDAAKNADATVIVAGLDLSVEAEGK 482 (758)
Q Consensus 403 Gp~a~~~~~~~G~~~g~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~e~Eg~ 482 (758)
||+|+....++|+|++.+++.+|++++|+++...+.|..||....+.+...+++|+++|++||+|||++|.+...++|+.
T Consensus 427 Gp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~~~A~~aD~vIv~~G~~~~~e~E~~ 506 (779)
T PLN03080 427 GPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQETEDH 506 (779)
T ss_pred CCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHHHHhccCCEEEEEeCCCccccccCC
Confidence 99999988888889998899999999999987778899998765555556788999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHhcCCCEEEEEecCceeeecccccCCCccEEEEccCCCchhHHHHHHHHhcCCCCCcccce
Q 040836 483 DRVDLLLPGFQTELINKVADAAKGPVTLVIMSAGAVDINFAKNNPKIKSILWVGYPGEEGGRAIADVIFGKYNPGGRLPI 562 (758)
Q Consensus 483 Dr~~l~Lp~~q~~Li~~va~~~~k~vVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~~~g~AlAdVL~G~~nPsGkLPv 562 (758)
||.+|.||+.|.+||++|++++++|||||+++|+|++|+|+++.++++|||++||||+++|+|+||||||++|||||||+
T Consensus 507 Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~ypGqegG~AiAdvLfG~vnPsGkLPv 586 (779)
T PLN03080 507 DRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPGGRLPM 586 (779)
T ss_pred CcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCCcccchhhhHHHHcCCCCCCCcCee
Confidence 99999999999999999998777899999999999999998766789999999999999999999999999999999999
Q ss_pred eecccccCCCCCcCCCCCCC--CCCCCCcccccCCCcccccCCCCCCCCceeeccCCCCccccccccccccccccccCCC
Q 040836 563 TWYEANYVKIPYTSMPLRPV--NNFPGRTYKFFDGPVVYPFGYGLSYTQFKYKVASSPKSVDIKLDKDQQCRDINYTVGT 640 (758)
Q Consensus 563 T~~p~~~~~~p~~~~~~~~~--~~~~g~~Yr~~~~~~lypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (758)
||||+++.++|+++++++++ .+|+|++||||+.+|+||||||||||||+|++++++..+++.......+. .....
T Consensus 587 T~~p~~~~~~P~~~~~~~~~~~~~~pg~~Yr~~~~~p~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~--~~~~~- 663 (779)
T PLN03080 587 TWYPESFTAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKKLSLSRSSVQDSI--SRKPL- 663 (779)
T ss_pred eecccccccCCccccCcccccccCCCCCCceeCCCCcceeccCCCccceeEecccccccccccccccccccc--ccccc-
Confidence 99999999999987776554 56899999999999999999999999999999874332112110000000 00000
Q ss_pred CCCCC--ccccccc-ccCCCceEEEEEEEEeCCCCCcceeEEEeeeCC-CCccccchhhccccccccCCCCEEEEEEEec
Q 040836 641 NKPPC--AAVLIDD-VKCKDYKFTFQIEVENMGKMDGSEVVMVYSKPP-GIAGTHIKQVIGYERVFIAAGQSAKVGFTMN 716 (758)
Q Consensus 641 ~~~~~--~~~~~~~-~~~~~~~~~v~v~V~NtG~~~G~evvQlYv~~~-~~~~~P~k~L~gF~kv~L~pGes~~v~~~l~ 716 (758)
..+.. ..+.... ..|+...++|+|+|||||+++|+||||||+++| ++..+|.|||+||+||+|+||||++|+|+|+
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlYv~~p~~~~~~P~k~L~gF~kv~L~~Ges~~V~~~l~ 743 (779)
T PLN03080 664 LQRRDELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDRVHTASGRSTETEIVVD 743 (779)
T ss_pred cccccccccccccccccCCCceEEEEEEEEECCcccCcEEEEEEEecCccCCCCcchhccCcEeEeeCCCCEEEEEEEeC
Confidence 00000 0000001 223323699999999999999999999999999 7788999999999999999999999999999
Q ss_pred cCCCceeEeCCCCeEEcCeeEEEEEecCCCceEEE
Q 040836 717 ACKSLKIVDNAANSLLASGAHTILVGEGVGGVSFP 751 (758)
Q Consensus 717 ~~~~ls~~d~~~~~~~~~G~y~i~vG~ss~~~~~~ 751 (758)
.+++|++||++++|++|+|+|+|+||+++|+++++
T Consensus 744 ~~~~ls~~d~~~~~~v~~G~y~l~vG~~~~~~~~~ 778 (779)
T PLN03080 744 PCKHLSVANEEGKRVLPLGDHVLMLGDLEHSLSIE 778 (779)
T ss_pred chHHceEEcCCCcEEEeCccEEEEEeCCccceEEe
Confidence 65789999999999999999999999999998875
|
|
| >PRK15098 beta-D-glucoside glucohydrolase; Provisional | Back alignment and domain information |
|---|
| >COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK05337 beta-hexosaminidase; Provisional | Back alignment and domain information |
|---|
| >PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 | Back alignment and domain information |
|---|
| >PF14310 Fn3-like: Fibronectin type III-like domain; PDB: 3ABZ_D 3AC0_D 2X40_A 2X41_A 2X42_A | Back alignment and domain information |
|---|
| >PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins | Back alignment and domain information |
|---|
| >PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known | Back alignment and domain information |
|---|
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
| >COG0486 ThdF Predicted GTPase [General function prediction only] | Back alignment and domain information |
|---|
| >PF14874 PapD-like: Flagellar-associated PapD-like | Back alignment and domain information |
|---|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13202 ureB urease subunit beta; Reviewed | Back alignment and domain information |
|---|
| >PRK13203 ureB urease subunit beta; Reviewed | Back alignment and domain information |
|---|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
| >cd00407 Urease_beta Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide | Back alignment and domain information |
|---|
| >TIGR00192 urease_beta urease, beta subunit | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 758 | ||||
| 2x40_A | 721 | Structure Of Beta-Glucosidase 3b From Thermotoga Ne | 4e-41 | ||
| 2x42_A | 721 | Structure Of Beta-Glucosidase 3b From Thermotoga Ne | 3e-40 | ||
| 4i3g_A | 829 | Crystal Structure Of Desr, A Beta-glucosidase From | 5e-32 | ||
| 4i3g_A | 829 | Crystal Structure Of Desr, A Beta-glucosidase From | 6e-14 | ||
| 3zyz_A | 713 | Crystal Structure Of A Glycoside Hydrolase Family 3 | 7e-32 | ||
| 4i8d_A | 714 | Crystal Structure Of Beta-D-Glucoside Glucohydrolas | 7e-32 | ||
| 3usz_A | 822 | Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc | 2e-30 | ||
| 1ex1_A | 605 | Beta-D-Glucan Exohydrolase From Barley Length = 605 | 2e-30 | ||
| 3rrx_A | 822 | Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet | 2e-30 | ||
| 1lq2_A | 602 | Crystal Structure Of Barley Beta-D-Glucan Glucohydr | 2e-30 | ||
| 3ac0_A | 845 | Crystal Structure Of Beta-Glucosidase From Kluyvero | 2e-22 | ||
| 3ac0_A | 845 | Crystal Structure Of Beta-Glucosidase From Kluyvero | 2e-14 | ||
| 3abz_A | 845 | Crystal Structure Of Se-Met Labeled Beta-Glucosidas | 6e-20 | ||
| 3abz_A | 845 | Crystal Structure Of Se-Met Labeled Beta-Glucosidas | 4e-14 | ||
| 3bmx_A | 642 | Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis | 3e-06 | ||
| 4gyj_A | 648 | Crystal Structure Of Mutant (D318n) Bacillus Subtil | 9e-06 | ||
| 3lk6_A | 616 | Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro | 1e-05 |
| >pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 | Back alignment and structure |
|
| >pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 | Back alignment and structure |
| >pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 | Back alignment and structure |
| >pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 | Back alignment and structure |
| >pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 | Back alignment and structure |
| >pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 | Back alignment and structure |
| >pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 | Back alignment and structure |
| >pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 | Back alignment and structure |
| >pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 | Back alignment and structure |
| >pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 | Back alignment and structure |
| >pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 | Back alignment and structure |
| >pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 | Back alignment and structure |
| >pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 | Back alignment and structure |
| >pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 | Back alignment and structure |
| >pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 | Back alignment and structure |
| >pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 | Back alignment and structure |
| >pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 | Back alignment and structure |
|---|
Score = 504 bits (1301), Expect = e-170
Identities = 190/796 (23%), Positives = 318/796 (39%), Gaps = 174/796 (21%)
Query: 23 ERAKDLVERMTLPEKVQQMGDLA-------------------YGVPRLGLPLYEWWSEAL 63
E+ +++ ++TL EKV+ + + + VPR+GLP + ++
Sbjct: 2 EKVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGP 60
Query: 64 HGVSFIGRRTNSPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNL 123
G+ R N ++ T+FP I+ +++N L +++G+ + E R
Sbjct: 61 AGL-----RINPTRENDENTY--YTTAFPVEIMLASTWNRELLEEVGKAMGEEVREY--- 110
Query: 124 GNAGLTFWSPNINVVRDPRWGRVLETPGEDPYVVGRYAINYVRGLQDVEGVEYHRDSDSR 183
+ +P +N+ R+P GR E EDP + G A ++V+G+Q +GV
Sbjct: 111 -GVDVLL-APAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQS-QGV--------- 158
Query: 184 PLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSY 243
AC KH+ A N E N R D+ V+E+ ++E ++ FE+ V + SVM +Y
Sbjct: 159 ----GACIKHFVAN---NQETN-RMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAY 210
Query: 244 NRVNGIPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKA 303
N++NG + LL + +R +W F G+++SD + VE LKA
Sbjct: 211 NKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGDNPVEQ---------------LKA 255
Query: 304 GLDLDC-GDYYTNFTMG---------AVQQGKIAEADIDTSLRFLYIVLMRLGYFDGSPQ 353
G DL G Y T A+++GK++E +D +R + VL+ F
Sbjct: 256 GNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRY 315
Query: 354 YKNLGKNNICNPQHIELAAEAARQGIVLLKNDNGALPLNTGNIKTLALVGPHANATKAM- 412
N +H ++A EA +G+VLL+N+ ALPL+ +AL G T
Sbjct: 316 -----SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTGQIETIKGG 367
Query: 413 IGNYEGTPCRYTSPMDGF--YAYSKVINYAPGCADIV----------------------- 447
G+ + P S ++G + A D +
Sbjct: 368 TGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPK 427
Query: 448 -CQNNSMIPAAIDAAKNADATVIVAGLDLSVEAEGKDR----VDLLLPGFQTELINKVAD 502
+N AK D VIV EG DR D L +T+LI V+
Sbjct: 428 LPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSR 484
Query: 503 AAKG---PVTLVIMSAGAVDINFAKNNPKIKSILWVGYPGEEGGRAIADVIFGKYNPGGR 559
V +++ V++ ++ IL V G+E GR +ADV+ G+ NP G+
Sbjct: 485 EFHEQGKKVIVLLNIGSPVEVVSWRDLV--DGILLVWQAGQETGRIVADVLTGRINPSGK 542
Query: 560 LPITWYEANYVKIPYTSMPLRPVNNFPGRT--------YKFFDG---PVVYPFGYGLSYT 608
LP T+ +Y +P + P P +N Y+++D Y FGYGLSYT
Sbjct: 543 LPTTFP-RDYSDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYT 601
Query: 609 QFKYKVASSPKSVDIKLDKDQQCRDINYTVGTNKPPCAAVLIDDVKCKDYKFTFQIEVEN 668
F+Y D+ + D + Q +EN
Sbjct: 602 TFEYS--------DLNVSFDGE----------------------------TLRVQYRIEN 625
Query: 669 MGKMDGSEVVMVY-SKPPGIAGTHIKQVIGYERV-FIAAGQSAKVGFTMNACKSLKIVDN 726
G G EV VY P G +++ + + + G+S +V + + L +
Sbjct: 626 TGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN- 683
Query: 727 AANSLLASGAHTILVG 742
++ +G + + VG
Sbjct: 684 GEEWVVEAGEYEVRVG 699
|
| >3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 | Back alignment and structure |
|---|
| >1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 | Back alignment and structure |
|---|
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 | Back alignment and structure |
|---|
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 | Back alignment and structure |
|---|
| >3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 | Back alignment and structure |
|---|
| >3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 | Back alignment and structure |
|---|
| >2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 758 | |||
| 3zyz_A | 713 | Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 | 100.0 | |
| 3abz_A | 845 | Beta-glucosidase I; glycoside hydrolase family3 be | 100.0 | |
| 2x41_A | 721 | Beta-glucosidase; hydrolase, TIM barrel fold, fibr | 100.0 | |
| 1x38_A | 602 | Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai | 100.0 | |
| 3rrx_A | 822 | EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( | 100.0 | |
| 3bmx_A | 642 | Uncharacterized lipoprotein YBBD; beta-N-hexosamin | 100.0 | |
| 3sql_A | 535 | Glycosyl hydrolase family 3; structural genomics, | 100.0 | |
| 3tev_A | 351 | Glycosyl hyrolase, family 3; PSI-biology, midwest | 100.0 | |
| 4gvf_A | 349 | Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N | 100.0 | |
| 2oxn_A | 340 | Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O | 100.0 | |
| 4g6c_A | 348 | Beta-hexosaminidase 1; ssgcid, niaid, structural g | 100.0 | |
| 3idu_A | 127 | Uncharacterized protein; all beta-protein, structu | 97.16 | |
| 2l0d_A | 114 | Cell surface protein; structural genomics, northea | 96.49 | |
| 2kut_A | 122 | Uncharacterized protein; structural genomics, PSI- | 95.72 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 92.37 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 87.77 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 87.73 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 87.15 | |
| 4ep8_B | 101 | Urease subunit beta; alpha-beta barrel, nickel met | 85.57 | |
| 2x3c_A | 343 | Toxic extracellular endopeptidase; hydrolase; 1.99 | 85.11 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 82.58 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 81.65 | |
| 4ac7_B | 126 | Urease subunit beta; hydrolase, bacillus pasteurii | 81.57 | |
| 4ubp_B | 126 | Protein (urease (chain B)); bacillus pasteurii, ni | 81.57 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 80.17 |
| >3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-147 Score=1294.43 Aligned_cols=645 Identities=26% Similarity=0.425 Sum_probs=540.6
Q ss_pred hHHHHHHHHhcCCHHHHHHhhcCC----------CCCCCCCCcchhhhhhhcccccccccccCCCCCCcccCCCCCCccc
Q 040836 21 YPERAKDLVERMTLPEKVQQMGDL----------AYGVPRLGLPLYEWWSEALHGVSFIGRRTNSPPGTHFDSEVPGATS 90 (758)
Q Consensus 21 ~~~rv~~ll~~MTleEKi~ql~~~----------~~~i~~lgi~~~~~~~~~~~gv~~~~~~~~~~~g~~~~~~~~~~t~ 90 (758)
.++|+++||++||||||++||.+. +.+|+|||||.+. +.|+.||++ +. .++|.
T Consensus 12 a~~ra~~l~~~lTl~EK~~l~~g~~~~~~~~~~~~~~i~rlgiP~~~-~~Dg~~G~r-------------~~---~~~T~ 74 (713)
T 3zyz_A 12 AYDKAKAALAKLNLQDKVGIVSGVGWNGGPCVGNTSPASKISYPSLC-LQDGPLGVR-------------YS---TGSTA 74 (713)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHBBCCTTCSSSSEEBCCBGGGTBCCCE-EECCTTSCT-------------TC---SSCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHhcCCCcccCccccccCCcCCCCCceEE-EEecCceEE-------------CC---CCCCc
Confidence 789999999999999999999753 5689999999984 355555543 22 15899
Q ss_pred CchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcccc-ccceec-ccCCCCCCccccCcCCChHHHHHHHHHHHhhh
Q 040836 91 FPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGLTF-WSPNIN-VVRDPRWGRVLETPGEDPYVVGRYAINYVRGL 168 (758)
Q Consensus 91 fP~~~~laat~d~~l~~~~g~~~a~E~ra~~~~g~~G~~~-laP~vd-v~r~p~~gr~~esfgeDP~l~~~~a~a~v~G~ 168 (758)
||+++++|||||++|++++|+++|+|+|++ |+|+ |+|++| |.|||+|||++|+|||||+|+++|+.|||+|+
T Consensus 75 fP~~~~laat~d~~l~~~~g~~~g~E~ra~------Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Gl 148 (713)
T 3zyz_A 75 FTPGVQAASTWDVNLIRERGQFIGEEVKAS------GIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGI 148 (713)
T ss_dssp CCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHhcCCHHHHHHHHHHHHHHHHhc------CCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 8888 999999 88999999999999999999999999999999
Q ss_pred ccCCCCccccCCCCCCcceeeeecccccCccCCCCCCCcccccccCCHHHHHHhccHHHHHHHHcCCCceEEeeccccCC
Q 040836 169 QDVEGVEYHRDSDSRPLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSYNRVNG 248 (758)
Q Consensus 169 Q~~~g~~~~~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng 248 (758)
|+. | |++|+|||||||++. .|...++.+++++|+|+||+||+++|++| +++||||||++||
T Consensus 149 q~~-g-------------V~a~~KHF~g~g~e~----~r~~~~~~v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng 209 (713)
T 3zyz_A 149 QSV-G-------------VQATAKHYILNEQEL----NRETISSNPDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNT 209 (713)
T ss_dssp HHT-T-------------CEEEEEEETTCCCST----TTTTCEECCCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETT
T ss_pred hhC-C-------------eEEEEecCccCCccc----cCccccCcCCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCC
Confidence 998 7 999999999999764 45556778999999999999999999987 5699999999999
Q ss_pred cccccCHHHHHHHHhhhcCCCcEEEcCchhhhhhhhhcccccCCHHHHHHHHHHcCCCcCCCc--------chHHHHHHH
Q 040836 249 IPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKAGLDLDCGD--------YYTNFTMGA 320 (758)
Q Consensus 249 ~pa~~s~~ll~~lLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~--------~~~~~l~~a 320 (758)
+|||.|++||++|||+||||+|+|||||+++. ++++|++||+||+|.. ++.+.|.+|
T Consensus 210 ~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~---------------~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~a 274 (713)
T 3zyz_A 210 TWACEDQYTLQTVLKDQLGFPGYVMTDWNAQH---------------TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNA 274 (713)
T ss_dssp EEGGGCHHHHCCCCCCCSCCCSEEEESTTCCC---------------CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHH
T ss_pred ccCcCCHHHHHHHHHHHcCCCEEEEecCccHH---------------HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHH
Confidence 99999999999999999999999999998642 3578999999999963 345889999
Q ss_pred HHcCCCcHHhHHhHHHHHHHHHHHhCCCCCCcccccCCCCCCCCHHHHHHHHHHHhhceEEecCCCCCCCCCCCCCceEE
Q 040836 321 VQQGKIAEADIDTSLRFLYIVLMRLGYFDGSPQYKNLGKNNICNPQHIELAAEAARQGIVLLKNDNGALPLNTGNIKTLA 400 (758)
Q Consensus 321 v~~g~i~~~~id~av~Ril~~k~~lGlfd~~~~~~~~~~~~v~~~~~~~la~~~a~eSiVLLKN~~~~LPL~~~~~~kIa 400 (758)
|++|+|++++||+||+|||++|+++|+||+ +|.........+++|+++|+++|++|||||||++++|||++. +||+
T Consensus 275 v~~G~i~~~~id~av~RIL~~k~~lg~~~~--~~~~~~~~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~Ia 350 (713)
T 3zyz_A 275 VNSNQVPTSRVDDMVTRILAAWYLTGQDQA--GYPSFNISRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIA 350 (713)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHTTTTST--TCCCCCTTSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEE
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHhCCccc--CCCCcccccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEE
Confidence 999999999999999999999999999973 233222222347899999999999999999999999999864 7999
Q ss_pred EEccCccccc-----------------cccccccC--CCCccCCHHHHHHhhccceeecCCCCcccccCCCChHHHHHHh
Q 040836 401 LVGPHANATK-----------------AMIGNYEG--TPCRYTSPMDGFYAYSKVINYAPGCADIVCQNNSMIPAAIDAA 461 (758)
Q Consensus 401 viGp~a~~~~-----------------~~~G~~~g--~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a 461 (758)
||||+|+... ...|++++ .+++.+|++++|++++.. .|+. +.....+.+++|+++|
T Consensus 351 ViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~----~g~~-v~~~~~~~~~~a~~~A 425 (713)
T 3zyz_A 351 VVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASS----QGTQ-VTLSNTDNTSSGASAA 425 (713)
T ss_dssp EESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHT----TTCE-EEEECSCCHHHHHHHH
T ss_pred EECCCccccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhcc----CCeE-EEEeCCccHHHHHHHh
Confidence 9999997421 11233333 467789999999987531 1111 1111234688999999
Q ss_pred hcCCEEEEEEcCCCCcccCCC--------CCCCCCCChhHHHHHHHHHHhcCCCEEEEEecCceeee-cccccCCCccEE
Q 040836 462 KNADATVIVAGLDLSVEAEGK--------DRVDLLLPGFQTELINKVADAAKGPVTLVIMSAGAVDI-NFAKNNPKIKSI 532 (758)
Q Consensus 462 ~~aD~vIv~vG~~~~~e~Eg~--------Dr~~l~Lp~~q~~Li~~va~~~~k~vVvVl~~g~P~~l-~~~~~~~~v~Ai 532 (758)
+++|++||++|.. ++|+. ||.+|.||+.|++||++|+++ ++|||||+++|+|++| +|+ +.++++||
T Consensus 426 ~~aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ai 500 (713)
T 3zyz_A 426 RGKDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAV 500 (713)
T ss_dssp TTCSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEE
T ss_pred hcCCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hccccCEE
Confidence 9999999999853 46665 999999999999999999986 5789999999999999 676 34789999
Q ss_pred EEccCCCchhHHHHHHHHhcCCCCCcccceeecccccCCCCCcCCCCCCCCCCCC---CcccccCC---CcccccCCCCC
Q 040836 533 LWVGYPGEEGGRAIADVIFGKYNPGGRLPITWYEANYVKIPYTSMPLRPVNNFPG---RTYKFFDG---PVVYPFGYGLS 606 (758)
Q Consensus 533 L~a~~~G~~~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~p~~~~~~~~~~~~~g---~~Yr~~~~---~~lypFG~GLS 606 (758)
|++||||+++|+||||||||++|||||||+|| |++.+|+|.... ..+...|.. .+||||+. +|+||||||||
T Consensus 501 l~aw~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~~d~p~~~~-~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLS 578 (713)
T 3zyz_A 501 VWAGLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSPNDYNTRIV-SGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLS 578 (713)
T ss_dssp EECCCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCGGGSSCCCC-CSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBC
T ss_pred EEcCCCCchhhheehhhhcCCcCCCccCccee-cCChhhCCCccc-cCCccccCCCCccCceeccCCCCceeecCCCCCC
Confidence 99999999999999999999999999999998 888888885321 111123432 57999985 79999999999
Q ss_pred CCCceeeccCCCCccccccccccccccccccCCCCCCCCcccccccccCCCceEEEEEEEEeCCCCCcceeEEEeeeCC-
Q 040836 607 YTQFKYKVASSPKSVDIKLDKDQQCRDINYTVGTNKPPCAAVLIDDVKCKDYKFTFQIEVENMGKMDGSEVVMVYSKPP- 685 (758)
Q Consensus 607 YTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG~~~G~evvQlYv~~~- 685 (758)
||||+|++++. +.. . .... +.+....-....++++.++|+|+|||||+++|+||||||+++|
T Consensus 579 YTtF~ys~l~~--------~~~-~-----~~~~---~~~~~~~gg~~~~~~~~~~vsv~VtNtG~~~G~EVvQlYv~~~~ 641 (713)
T 3zyz_A 579 YTKFNYSRLSV--------LST-A-----KSGP---ATGAVVPGGPSDLFQNVATVTVDIANSGQVTGAEVAQLYITYPS 641 (713)
T ss_dssp SSCEEEEEEEE--------EEC-C-----CCEE---CCSCEETTEETTTTSEEEEEEEEEEECSSSCEEEEEEEEEECCT
T ss_pred cccEEEeeeEe--------ccc-c-----ccCc---ccccccccccccccCCeEEEEEEEEeCCCCccceeeeeeeecCC
Confidence 99999999882 210 0 0000 0000000000112346899999999999999999999999999
Q ss_pred CCccccchhhccccccccCCCCEEEEEEEeccCCCceeEeCC-CCeEEcCeeEEEEEecCCCceEEEEEEec
Q 040836 686 GIAGTHIKQVIGYERVFIAAGQSAKVGFTMNACKSLKIVDNA-ANSLLASGAHTILVGEGVGGVSFPLQLNL 756 (758)
Q Consensus 686 ~~~~~P~k~L~gF~kv~L~pGes~~v~~~l~~~~~ls~~d~~-~~~~~~~G~y~i~vG~ss~~~~~~~~~~~ 756 (758)
+++.+|.||||||+||+|+||||++|+|+|++ ++|++||+. ++|++|+|+|+|+||.||+|++++..+++
T Consensus 642 ~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l~~~~~v 712 (713)
T 3zyz_A 642 SAPRTPPKQLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRLTSTLSV 712 (713)
T ss_dssp TSSSCCSCEEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEEEEEEEE
T ss_pred CCCCchhHHhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCcceeEEEEE
Confidence 88999999999999999999999999999998 899999986 78999999999999999999999888764
|
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* | Back alignment and structure |
|---|
| >2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* | Back alignment and structure |
|---|
| >1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* | Back alignment and structure |
|---|
| >3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A | Back alignment and structure |
|---|
| >3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* | Back alignment and structure |
|---|
| >3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* | Back alignment and structure |
|---|
| >3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* | Back alignment and structure |
|---|
| >2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A | Back alignment and structure |
|---|
| >4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* | Back alignment and structure |
|---|
| >3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A | Back alignment and structure |
|---|
| >2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans} | Back alignment and structure |
|---|
| >2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens} | Back alignment and structure |
|---|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
| >4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ... | Back alignment and structure |
|---|
| >2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A | Back alignment and structure |
|---|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
| >4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B* | Back alignment and structure |
|---|
| >4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B* | Back alignment and structure |
|---|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 758 | ||||
| d1x38a1 | 388 | c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te | 3e-52 | |
| d1x38a2 | 214 | c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, | 4e-27 | |
| d1tr9a_ | 330 | c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol | 2e-11 |
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 184 bits (467), Expect = 3e-52
Identities = 96/397 (24%), Positives = 158/397 (39%), Gaps = 40/397 (10%)
Query: 11 DFP-YCDAKLPYPERAKDLVERMTLPEKVQQM------------------GDLAYG---V 48
D+ Y DA P +R DL+ RMTL EK+ QM G L G V
Sbjct: 1 DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSV 60
Query: 49 PRLGLPLYEWWS------EALHGVSFIGRRTNSPPGTHFDSEVPGATSFPTVILTTASFN 102
PR G EW +A H + V GAT FP + A+ +
Sbjct: 61 PRKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRD 120
Query: 103 ESLWKKIGQTVSTEARAMYNLGNAGLTFWSPNINVVRDPRWGRVLETPGEDPYVVGRYAI 162
L K+IG+ + E RA ++P I V RDPRWGR E+ ED +V
Sbjct: 121 PYLVKRIGEATALEVRATGIQ-----YAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTE 175
Query: 163 NYVRGLQDVEGVEYH-RDSDSRPLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQE 221
DV + K++AC KH+ + ++ + + +
Sbjct: 176 LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGD---GGTVDGINENNTIINREGLMN 232
Query: 222 TFILPFEMCVNEGDVSSVMCSYNRVNGIPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQT 281
+ ++ +++G S+VM SY+ NG+ A+ L+ ++ F G+++SD + I
Sbjct: 233 IHMPAYKNAMDKGV-STVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDR 291
Query: 282 IVESHKF-LNDTKEDAVARVLKAGLDLDCGDYYTNFTMGAVQQGKIAEADIDTSLRFLYI 340
I + + + ++ L + + + + G V G I + ID ++ +
Sbjct: 292 ITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILR 351
Query: 341 VLMRLGYFDGSPQYKNLGKNNICNPQHIELAAEAARQ 377
V +G F+ P + +H +LA EAAR+
Sbjct: 352 VKFTMGLFEN-PYADPAMAEQLGKQEHRDLAREAARK 387
|
| >d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 | Back information, alignment and structure |
|---|
| >d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 758 | |||
| d1x38a1 | 388 | Beta-D-glucan exohydrolase, N-terminal domain {Bar | 100.0 | |
| d1tr9a_ | 330 | Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: | 100.0 | |
| d1x38a2 | 214 | Beta-D-glucan exohydrolase, C-terminal domain {Bar | 100.0 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 96.76 | |
| d2q3za2 | 114 | Transglutaminase, two C-terminal domains {Human (H | 89.41 | |
| d1ejxb_ | 101 | Urease, beta-subunit {Klebsiella aerogenes [TaxId: | 87.38 | |
| d1g0da2 | 112 | Transglutaminase, two C-terminal domains {Red sea | 87.11 | |
| d1vjja2 | 115 | Transglutaminase, two C-terminal domains {Human (H | 86.71 | |
| d1ex0a2 | 112 | Transglutaminase, two C-terminal domains {Human (H | 85.9 | |
| d4ubpb_ | 122 | Urease, beta-subunit {Bacillus pasteurii [TaxId: 1 | 84.74 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 81.01 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 80.56 |
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=5.9e-71 Score=609.66 Aligned_cols=348 Identities=28% Similarity=0.457 Sum_probs=281.3
Q ss_pred CC-cCCCCCChHHHHHHHHhcCCHHHHHHhhcCC---------------------CCCCCCCCcchhhhhhhcccccccc
Q 040836 12 FP-YCDAKLPYPERAKDLVERMTLPEKVQQMGDL---------------------AYGVPRLGLPLYEWWSEALHGVSFI 69 (758)
Q Consensus 12 ~~-~~d~~~~~~~rv~~ll~~MTleEKi~ql~~~---------------------~~~i~~lgi~~~~~~~~~~~gv~~~ 69 (758)
+| |+||++|+++||++||++||||||||||++. ...+++++.+...| .+.+++++..
T Consensus 2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~-~~~~~~lq~~ 80 (388)
T d1x38a1 2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEW-QDMVDGFQKA 80 (388)
T ss_dssp CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHH-HHHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHH-HHHHHHHHHH
Confidence 46 9999999999999999999999999999742 23467888887654 3333333321
Q ss_pred cccCCCCCCccc-------CC--CCCCcccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcccc-ccceecccC
Q 040836 70 GRRTNSPPGTHF-------DS--EVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGLTF-WSPNINVVR 139 (758)
Q Consensus 70 ~~~~~~~~g~~~-------~~--~~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~~~~g~~G~~~-laP~vdv~r 139 (758)
. ...+.||+. +| ...+.|.||+++++|||||+++++++|+++|+|+|++ |+|+ |||++||.|
T Consensus 81 ~--~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~------Gin~~~aPv~Dv~~ 152 (388)
T d1x38a1 81 C--MSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT------GIQYAFAPCIAVCR 152 (388)
T ss_dssp H--HTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCCEECCCBCCCCS
T ss_pred H--HhccCCCCceeecccccCcccccccccchhhhhccccCCHHHHHHHHHHhhHHHHhc------CCccccCCcccccc
Confidence 1 011122221 11 1225789999999999999999999999999999999 8887 999999999
Q ss_pred CCCCCccccCcCCChHHHHHHHHHHHhhhccCCCCcc-cc-CCCCCCcceeeeecccccCccCCCCCCCcccccccCCHH
Q 040836 140 DPRWGRVLETPGEDPYVVGRYAINYVRGLQDVEGVEY-HR-DSDSRPLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQ 217 (758)
Q Consensus 140 ~p~~gr~~esfgeDP~l~~~~a~a~v~G~Q~~~g~~~-~~-~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~ 217 (758)
||+|||++|||||||+|+++|+. +|.++|+..+... .+ +...+..+|+||+|||||||.... +++..++.++++
T Consensus 153 ~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~---~~~~~~~~i~~~ 228 (388)
T d1x38a1 153 DPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GINENNTIINRE 228 (388)
T ss_dssp CTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGG---GCTTCEECCCHH
T ss_pred cccccccccCccCCHHHHHHHHh-hhhhhhchhhhhhcccccccccccCcceeeeeeecCCcccc---CccccccchhHH
Confidence 99999999999999999999964 7888876522110 00 001124469999999999985532 234445678999
Q ss_pred HHHHhccHHHHHHHHcCCCceEEeeccccCCcccccCHHHHHHHHhhhcCCCcEEEcCchhhhhhhhhcccccCCHHHHH
Q 040836 218 DMQETFILPFEMCVNEGDVSSVMCSYNRVNGIPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAV 297 (758)
Q Consensus 218 ~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~~ea~ 297 (758)
+|++.||+||+.+|++|. .+|||+||.+||+|+|.|+++|+++||++|||+|+|||||++|+++.. ++.....+++
T Consensus 229 ~l~~~~l~pf~~~i~~g~-~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~---~~~~~~~~~~ 304 (388)
T d1x38a1 229 GLMNIHMPAYKNAMDKGV-STVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT---PAGSDYSYSV 304 (388)
T ss_dssp HHHHHTSHHHHHHHHTTC-CEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSS---STTTTHHHHH
T ss_pred HHHHHhhhhhHHHHhhcc-ccccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhcccccc---ccCCcHHHHH
Confidence 999999999999999885 599999999999999999999999999999999999999999998864 3345677889
Q ss_pred HHHHHcCCCcCCCc----chHHHHHHHHHcCCCcHHhHHhHHHHHHHHHHHhCCCCCCcccccCC-CCCCCCHHHHHHHH
Q 040836 298 ARVLKAGLDLDCGD----YYTNFTMGAVQQGKIAEADIDTSLRFLYIVLMRLGYFDGSPQYKNLG-KNNICNPQHIELAA 372 (758)
Q Consensus 298 ~~al~AG~D~~~~~----~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~lGlfd~~~~~~~~~-~~~v~~~~~~~la~ 372 (758)
+.++.||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|+++||||+ ||.... ...+++++|+++|+
T Consensus 305 ~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~--p~~~~~~~~~i~~~~h~~~a~ 382 (388)
T d1x38a1 305 KASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN--PYADPAMAEQLGKQEHRDLAR 382 (388)
T ss_dssp HHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTC--CSCCGGGGGGTTCHHHHHHHH
T ss_pred HHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCC--CCCChhhhhhcCCHHHHHHHH
Confidence 99999999999863 356789999999999999999999999999999999994 354322 24578999999999
Q ss_pred HHHhhc
Q 040836 373 EAARQG 378 (758)
Q Consensus 373 ~~a~eS 378 (758)
++|+||
T Consensus 383 ~aA~~S 388 (388)
T d1x38a1 383 EAARKS 388 (388)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 999997
|
| >d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
| >d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
| >d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]} | Back information, alignment and structure |
|---|
| >d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|